Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 4506495
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4506495 regulatory factor X3 isoform a [Homo sapiens]
(707 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4506495 regulatory factor X3 isoform a [Homo sapiens] 1408 0.0
gi|19743884 regulatory factor X3 isoform b [Homo sapiens] 1307 0.0
gi|19743881 regulatory factor X2 isoform a [Homo sapiens] 882 0.0
gi|19743879 regulatory factor X2 isoform b [Homo sapiens] 832 0.0
gi|238859557 regulatory factor X1 [Homo sapiens] 772 0.0
gi|15011898 regulatory factor X4 isoform b [Homo sapiens] 278 1e-74
gi|47132527 regulatory factor X4 isoform c [Homo sapiens] 278 1e-74
gi|27734871 regulatory factor X, 6 [Homo sapiens] 247 2e-65
gi|19743886 regulatory factor X4 isoform a [Homo sapiens] 193 4e-49
gi|224586784 hypothetical protein LOC731220 [Homo sapiens] 85 2e-16
gi|148613886 regulatory factor X domain containing 2 [Homo sapiens] 70 7e-12
gi|71040090 regulatory factor X, 5 [Homo sapiens] 63 1e-09
gi|4557843 regulatory factor X, 5 [Homo sapiens] 63 1e-09
gi|217272829 nuclear transcription factor Y, gamma isoform 3 [Ho... 40 0.010
gi|217272833 nuclear transcription factor Y, gamma isoform 4 [Ho... 37 0.048
gi|11496978 nuclear transcription factor Y, gamma isoform 2 [Hom... 37 0.048
gi|41349464 PR domain containing 10 isoform 4 [Homo sapiens] 36 0.11
gi|56549668 AT rich interactive domain 2 (ARID, RFX-like) [Homo ... 35 0.31
gi|41349462 PR domain containing 10 isoform 3 [Homo sapiens] 35 0.31
gi|161016767 mucin 21 [Homo sapiens] 34 0.41
gi|217272835 nuclear transcription factor Y, gamma isoform 5 [Ho... 33 0.70
gi|54792088 hypothetical protein LOC23506 [Homo sapiens] 33 0.70
gi|41349460 PR domain containing 10 isoform 2 [Homo sapiens] 32 1.6
gi|41349458 PR domain containing 10 isoform 1 [Homo sapiens] 32 1.6
gi|33457336 chromosome 14 open reading frame 4 [Homo sapiens] 32 2.0
gi|119703744 desmoglein 1 preproprotein [Homo sapiens] 32 2.6
gi|239755778 PREDICTED: mucin 19, oligomeric [Homo sapiens] 31 4.5
gi|239750280 PREDICTED: mucin 19, oligomeric [Homo sapiens] 31 4.5
gi|239744589 PREDICTED: mucin 19 [Homo sapiens] 31 4.5
gi|170650685 zinc finger and BTB domain containing 37 isoform a ... 31 4.5
>gi|4506495 regulatory factor X3 isoform a [Homo sapiens]
Length = 707
Score = 1408 bits (3645), Expect = 0.0
Identities = 707/707 (100%), Positives = 707/707 (100%)
Query: 1 MQTSETGSDTGSTVTLQTSVASQAAVPTQVVQQVPVQQQVQQVQTVQQVQHVYPAQVQYV 60
MQTSETGSDTGSTVTLQTSVASQAAVPTQVVQQVPVQQQVQQVQTVQQVQHVYPAQVQYV
Sbjct: 1 MQTSETGSDTGSTVTLQTSVASQAAVPTQVVQQVPVQQQVQQVQTVQQVQHVYPAQVQYV 60
Query: 61 EGSDTVYTNGAIRTTTYPYTETQMYSQNTGGNYFDTQGSSAQVTTVVSSHSMVGTGGIQM 120
EGSDTVYTNGAIRTTTYPYTETQMYSQNTGGNYFDTQGSSAQVTTVVSSHSMVGTGGIQM
Sbjct: 61 EGSDTVYTNGAIRTTTYPYTETQMYSQNTGGNYFDTQGSSAQVTTVVSSHSMVGTGGIQM 120
Query: 121 GVTGGQLISSSGGTYLIGNSMENSGHSVTHTTRASPATIEMAIETLQKSDGLSTHRSSLL 180
GVTGGQLISSSGGTYLIGNSMENSGHSVTHTTRASPATIEMAIETLQKSDGLSTHRSSLL
Sbjct: 121 GVTGGQLISSSGGTYLIGNSMENSGHSVTHTTRASPATIEMAIETLQKSDGLSTHRSSLL 180
Query: 181 NSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKLDPVNAASFGKLIRSIFMGLRTRR 240
NSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKLDPVNAASFGKLIRSIFMGLRTRR
Sbjct: 181 NSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKLDPVNAASFGKLIRSIFMGLRTRR 240
Query: 241 LGTRGNSKYHYYGIRVKPDSPLNRLQEDMQYMAMRQQPMQQKQRYKPMQKVDGVADGFTG 300
LGTRGNSKYHYYGIRVKPDSPLNRLQEDMQYMAMRQQPMQQKQRYKPMQKVDGVADGFTG
Sbjct: 241 LGTRGNSKYHYYGIRVKPDSPLNRLQEDMQYMAMRQQPMQQKQRYKPMQKVDGVADGFTG 300
Query: 301 SGQQTGTSVEQTVIAQSQHHQQFLDASRALPEFGEVEISSLPDGTTFEDIKSLQSLYREH 360
SGQQTGTSVEQTVIAQSQHHQQFLDASRALPEFGEVEISSLPDGTTFEDIKSLQSLYREH
Sbjct: 301 SGQQTGTSVEQTVIAQSQHHQQFLDASRALPEFGEVEISSLPDGTTFEDIKSLQSLYREH 360
Query: 361 CEAILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGTTITESSNLSEIESRLPKAKLITLCK 420
CEAILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGTTITESSNLSEIESRLPKAKLITLCK
Sbjct: 361 CEAILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGTTITESSNLSEIESRLPKAKLITLCK 420
Query: 421 HESILKWMCNCDHGMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLSNAMNNIPQR 480
HESILKWMCNCDHGMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLSNAMNNIPQR
Sbjct: 421 HESILKWMCNCDHGMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLSNAMNNIPQR 480
Query: 481 MIQTKVAAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASW 540
MIQTKVAAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASW
Sbjct: 481 MIQTKVAAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASW 540
Query: 541 VCQCDDNMVQRLETDFKMTLQQQSTLEQWAAWLDNVMMQALKPYEGRPSFPKAARQFLLK 600
VCQCDDNMVQRLETDFKMTLQQQSTLEQWAAWLDNVMMQALKPYEGRPSFPKAARQFLLK
Sbjct: 541 VCQCDDNMVQRLETDFKMTLQQQSTLEQWAAWLDNVMMQALKPYEGRPSFPKAARQFLLK 600
Query: 601 WSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAQATGETPIAVMGEVREA 660
WSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAQATGETPIAVMGEVREA
Sbjct: 601 WSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAQATGETPIAVMGEVREA 660
Query: 661 ERAVTHWVIKNKPELHFSLNTLLIKTMVPNQVSLRARRDCGVIARVP 707
ERAVTHWVIKNKPELHFSLNTLLIKTMVPNQVSLRARRDCGVIARVP
Sbjct: 661 ERAVTHWVIKNKPELHFSLNTLLIKTMVPNQVSLRARRDCGVIARVP 707
>gi|19743884 regulatory factor X3 isoform b [Homo sapiens]
Length = 749
Score = 1307 bits (3383), Expect = 0.0
Identities = 656/656 (100%), Positives = 656/656 (100%)
Query: 1 MQTSETGSDTGSTVTLQTSVASQAAVPTQVVQQVPVQQQVQQVQTVQQVQHVYPAQVQYV 60
MQTSETGSDTGSTVTLQTSVASQAAVPTQVVQQVPVQQQVQQVQTVQQVQHVYPAQVQYV
Sbjct: 1 MQTSETGSDTGSTVTLQTSVASQAAVPTQVVQQVPVQQQVQQVQTVQQVQHVYPAQVQYV 60
Query: 61 EGSDTVYTNGAIRTTTYPYTETQMYSQNTGGNYFDTQGSSAQVTTVVSSHSMVGTGGIQM 120
EGSDTVYTNGAIRTTTYPYTETQMYSQNTGGNYFDTQGSSAQVTTVVSSHSMVGTGGIQM
Sbjct: 61 EGSDTVYTNGAIRTTTYPYTETQMYSQNTGGNYFDTQGSSAQVTTVVSSHSMVGTGGIQM 120
Query: 121 GVTGGQLISSSGGTYLIGNSMENSGHSVTHTTRASPATIEMAIETLQKSDGLSTHRSSLL 180
GVTGGQLISSSGGTYLIGNSMENSGHSVTHTTRASPATIEMAIETLQKSDGLSTHRSSLL
Sbjct: 121 GVTGGQLISSSGGTYLIGNSMENSGHSVTHTTRASPATIEMAIETLQKSDGLSTHRSSLL 180
Query: 181 NSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKLDPVNAASFGKLIRSIFMGLRTRR 240
NSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKLDPVNAASFGKLIRSIFMGLRTRR
Sbjct: 181 NSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKLDPVNAASFGKLIRSIFMGLRTRR 240
Query: 241 LGTRGNSKYHYYGIRVKPDSPLNRLQEDMQYMAMRQQPMQQKQRYKPMQKVDGVADGFTG 300
LGTRGNSKYHYYGIRVKPDSPLNRLQEDMQYMAMRQQPMQQKQRYKPMQKVDGVADGFTG
Sbjct: 241 LGTRGNSKYHYYGIRVKPDSPLNRLQEDMQYMAMRQQPMQQKQRYKPMQKVDGVADGFTG 300
Query: 301 SGQQTGTSVEQTVIAQSQHHQQFLDASRALPEFGEVEISSLPDGTTFEDIKSLQSLYREH 360
SGQQTGTSVEQTVIAQSQHHQQFLDASRALPEFGEVEISSLPDGTTFEDIKSLQSLYREH
Sbjct: 301 SGQQTGTSVEQTVIAQSQHHQQFLDASRALPEFGEVEISSLPDGTTFEDIKSLQSLYREH 360
Query: 361 CEAILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGTTITESSNLSEIESRLPKAKLITLCK 420
CEAILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGTTITESSNLSEIESRLPKAKLITLCK
Sbjct: 361 CEAILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGTTITESSNLSEIESRLPKAKLITLCK 420
Query: 421 HESILKWMCNCDHGMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLSNAMNNIPQR 480
HESILKWMCNCDHGMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLSNAMNNIPQR
Sbjct: 421 HESILKWMCNCDHGMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLSNAMNNIPQR 480
Query: 481 MIQTKVAAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASW 540
MIQTKVAAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASW
Sbjct: 481 MIQTKVAAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASW 540
Query: 541 VCQCDDNMVQRLETDFKMTLQQQSTLEQWAAWLDNVMMQALKPYEGRPSFPKAARQFLLK 600
VCQCDDNMVQRLETDFKMTLQQQSTLEQWAAWLDNVMMQALKPYEGRPSFPKAARQFLLK
Sbjct: 541 VCQCDDNMVQRLETDFKMTLQQQSTLEQWAAWLDNVMMQALKPYEGRPSFPKAARQFLLK 600
Query: 601 WSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAQATGETPIAVMGE 656
WSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAQATGETPIAVMGE
Sbjct: 601 WSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAQATGETPIAVMGE 656
>gi|19743881 regulatory factor X2 isoform a [Homo sapiens]
Length = 723
Score = 882 bits (2279), Expect = 0.0
Identities = 463/682 (67%), Positives = 540/682 (79%), Gaps = 31/682 (4%)
Query: 1 MQTSETGSDTGSTVTLQTSVASQA--AVPTQVVQQV-----------PVQ-QQVQQV-QT 45
MQ SE G+D+ ++V L+ S A+ A P +V+ Q P+ +VQQV Q
Sbjct: 1 MQNSEGGADSPASVALRPSAAAPPVPASPQRVLVQAASSNPKGAQMQPISLPRVQQVPQQ 60
Query: 46 VQQVQHVYPAQVQYVEGSDTVYTNGAIRTTTYPYTETQMYSQNTGGNYFDTQGSSAQVTT 105
VQ VQHVYPAQVQYVEG D VYTNGAIRT E QMY+ ++ +YF+ G AQVT
Sbjct: 61 VQPVQHVYPAQVQYVEGGDAVYTNGAIRTAYTYNPEPQMYAPSSTASYFEAPGG-AQVTV 119
Query: 106 VVSS------HSMVGTGGIQMGVTGGQLISSSGGTYLIGNSMENSGHSVTHTTRASPATI 159
SS HSMVG I M V GG I SS G YLI M+++ HS+ HT+R+SPAT+
Sbjct: 120 AASSPPAVPSHSMVG---ITMDV-GGSPIVSSAGAYLIHGGMDSTRHSLAHTSRSSPATL 175
Query: 160 EMAIETLQKSDGLSTHRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKLDP 219
EMAIE LQKS+G+++H+S LLNSHLQWLLDNYETAEGVSLPRS+LYNHYLRHCQEHKLDP
Sbjct: 176 EMAIENLQKSEGITSHKSGLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDP 235
Query: 220 VNAASFGKLIRSIFMGLRTRRLGTRGNSKYHYYGIRVKPDSPLNRLQEDMQYMAMRQQPM 279
VNAASFGKLIRS+FMGLRTRRLGTRGNSKYHYYGIR+KPDSPLNRLQED QYMAMRQQPM
Sbjct: 236 VNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGIRLKPDSPLNRLQEDTQYMAMRQQPM 295
Query: 280 QQKQRYKPMQKVDGVADGFTGSGQQTGTSVEQTVIAQSQHHQQFLDASRALPEFGEVEIS 339
QK RY+P QK D + D + SG + + EQT+ QSQHHQQ++D S PEF ++
Sbjct: 296 HQKPRYRPAQKTDSLGDSGSHSGLHS--TPEQTMAVQSQHHQQYIDVSHVFPEFPAPDLG 353
Query: 340 S--LPDGTTFEDIKSLQSLYREHCEAILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGTTI 397
S L DG T D+K+LQ +YR HCEA +DVV+NLQF IEKLW +FW S ++ +DG T
Sbjct: 354 SFLLQDGVTLHDVKALQLVYRRHCEATVDVVMNLQFHYIEKLWLSFWN-SKASSSDGPTS 412
Query: 398 TESSNLSEIESRLPKAKLITLCKHESILKWMCNCDHGMYQALVEILIPDVLRPIPSALTQ 457
+S+ + LPK KLI+LC+ + IL+WM +CDH +YQALVEILIPDVLRP+PS LTQ
Sbjct: 413 LPASDEDPEGAVLPKDKLISLCQCDPILRWMRSCDHILYQALVEILIPDVLRPVPSTLTQ 472
Query: 458 AIRNFAKSLEGWLSNAMNNIPQRMIQTKVAAVSAFAQTLRRYTSLNHLAQAARAVLQNTS 517
AIRNFAKSLEGWL+NAM++ PQ++IQTKV VSAFAQTLRRYTSLNHLAQAARAVLQNTS
Sbjct: 473 AIRNFAKSLEGWLTNAMSDFPQQVIQTKVGVVSAFAQTLRRYTSLNHLAQAARAVLQNTS 532
Query: 518 QINQMLSDLNRVDFANVQEQASWVCQCDDNMVQRLETDFKMTLQQQSTLEQWAAWLDNVM 577
QINQMLSDLNRVDFANVQEQASWVCQC++++VQRLE DFK+TLQQQS+L+QWA+WLD+V+
Sbjct: 533 QINQMLSDLNRVDFANVQEQASWVCQCEESVVQRLEQDFKLTLQQQSSLDQWASWLDSVV 592
Query: 578 MQALKPYEGRPSFPKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYL 637
Q LK + G PSFPKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYL
Sbjct: 593 TQVLKQHAGSPSFPKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYL 652
Query: 638 VEHRVAQATGETPIAVMGEVRE 659
VEHRVA+ATGETPIAVMGE +
Sbjct: 653 VEHRVAEATGETPIAVMGEFND 674
>gi|19743879 regulatory factor X2 isoform b [Homo sapiens]
Length = 698
Score = 832 bits (2148), Expect = 0.0
Identities = 446/682 (65%), Positives = 517/682 (75%), Gaps = 56/682 (8%)
Query: 1 MQTSETGSDTGSTVTLQTSVASQA--AVPTQVVQQV-----------PVQ-QQVQQV-QT 45
MQ SE G+D+ ++V L+ S A+ A P +V+ Q P+ +VQQV Q
Sbjct: 1 MQNSEGGADSPASVALRPSAAAPPVPASPQRVLVQAASSNPKGAQMQPISLPRVQQVPQQ 60
Query: 46 VQQVQHVYPAQVQYVEGSDTVYTNGAIRTTTYPYTETQMYSQNTGGNYFDTQGSSAQVTT 105
VQ VQHVYPAQVQYVEG D VYTNGAIRT E QMY+ ++ +YF+ G AQVT
Sbjct: 61 VQPVQHVYPAQVQYVEGGDAVYTNGAIRTAYTYNPEPQMYAPSSTASYFEAPGG-AQVTV 119
Query: 106 VVSS------HSMVGTGGIQMGVTGGQLISSSGGTYLIGNSMENSGHSVTHTTRASPATI 159
SS HSMVG I M V GG I SS G YLI M+++ HS+ HT+R+SPAT
Sbjct: 120 AASSPPAVPSHSMVG---ITMDV-GGSPIVSSAGAYLIHGGMDSTRHSLAHTSRSSPAT- 174
Query: 160 EMAIETLQKSDGLSTHRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKLDP 219
LQWLLDNYETAEGVSLPRS+LYNHYLRHCQEHKLDP
Sbjct: 175 ------------------------LQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDP 210
Query: 220 VNAASFGKLIRSIFMGLRTRRLGTRGNSKYHYYGIRVKPDSPLNRLQEDMQYMAMRQQPM 279
VNAASFGKLIRS+FMGLRTRRLGTRGNSKYHYYGIR+KPDSPLNRLQED QYMAMRQQPM
Sbjct: 211 VNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGIRLKPDSPLNRLQEDTQYMAMRQQPM 270
Query: 280 QQKQRYKPMQKVDGVADGFTGSGQQTGTSVEQTVIAQSQHHQQFLDASRALPEFGEVEIS 339
QK RY+P QK D + D + SG + + EQT+ QSQHHQQ++D S PEF ++
Sbjct: 271 HQKPRYRPAQKTDSLGDSGSHSGLHS--TPEQTMAVQSQHHQQYIDVSHVFPEFPAPDLG 328
Query: 340 S--LPDGTTFEDIKSLQSLYREHCEAILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGTTI 397
S L DG T D+K+LQ +YR HCEA +DVV+NLQF IEKLW +FW S ++ +DG T
Sbjct: 329 SFLLQDGVTLHDVKALQLVYRRHCEATVDVVMNLQFHYIEKLWLSFWN-SKASSSDGPTS 387
Query: 398 TESSNLSEIESRLPKAKLITLCKHESILKWMCNCDHGMYQALVEILIPDVLRPIPSALTQ 457
+S+ + LPK KLI+LC+ + IL+WM +CDH +YQALVEILIPDVLRP+PS LTQ
Sbjct: 388 LPASDEDPEGAVLPKDKLISLCQCDPILRWMRSCDHILYQALVEILIPDVLRPVPSTLTQ 447
Query: 458 AIRNFAKSLEGWLSNAMNNIPQRMIQTKVAAVSAFAQTLRRYTSLNHLAQAARAVLQNTS 517
AIRNFAKSLEGWL+NAM++ PQ++IQTKV VSAFAQTLRRYTSLNHLAQAARAVLQNTS
Sbjct: 448 AIRNFAKSLEGWLTNAMSDFPQQVIQTKVGVVSAFAQTLRRYTSLNHLAQAARAVLQNTS 507
Query: 518 QINQMLSDLNRVDFANVQEQASWVCQCDDNMVQRLETDFKMTLQQQSTLEQWAAWLDNVM 577
QINQMLSDLNRVDFANVQEQASWVCQC++++VQRLE DFK+TLQQQS+L+QWA+WLD+V+
Sbjct: 508 QINQMLSDLNRVDFANVQEQASWVCQCEESVVQRLEQDFKLTLQQQSSLDQWASWLDSVV 567
Query: 578 MQALKPYEGRPSFPKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYL 637
Q LK + G PSFPKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYL
Sbjct: 568 TQVLKQHAGSPSFPKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYL 627
Query: 638 VEHRVAQATGETPIAVMGEVRE 659
VEHRVA+ATGETPIAVMGE +
Sbjct: 628 VEHRVAEATGETPIAVMGEFND 649
>gi|238859557 regulatory factor X1 [Homo sapiens]
Length = 979
Score = 772 bits (1994), Expect = 0.0
Identities = 407/672 (60%), Positives = 488/672 (72%), Gaps = 75/672 (11%)
Query: 29 QVVQQVPVQQQVQQVQTVQQVQHVYPAQVQYVEGSDTVYTNGAIRTTTYPYTETQMYSQN 88
Q +Q V V Q+VQQ+Q V V HVY +QVQYVEG D YT AIR++TY Y ET +Y+Q
Sbjct: 268 QGLQPVHVAQEVQQLQQVP-VPHVYSSQVQYVEGGDASYTASAIRSSTYSYPETPLYTQT 326
Query: 89 TGGNYFDTQGSSAQVTTVVSSHSMVGTGGIQMGVTGGQLISSS----------------- 131
+Y++ G++ QV+T +S ++ +G + M V+G Q+++SS
Sbjct: 327 ASTSYYEAAGTATQVSTPATSQAVASSGSMPMYVSGSQVVASSTSTGAGASNSSGGGGSG 386
Query: 132 -----------------------GGTYLI--GNSMENSGHSVTHTTRASPATIEMAIETL 166
GTY+I G + ++ S +HTTRASPAT+
Sbjct: 387 GGGGGGGGGGGGGSGSTGGGGSGAGTYVIQGGYMLGSASQSYSHTTRASPATV------- 439
Query: 167 QKSDGLSTHRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKLDPVNAASFG 226
QWLLDNYETAEGVSLPRSTLY HYL HCQE KL+PVNAASFG
Sbjct: 440 ------------------QWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFG 481
Query: 227 KLIRSIFMGLRTRRLGTRGNSKYHYYGIRVKPDSPLNRLQEDMQYMAMRQQPMQQKQRYK 286
KLIRS+FMGLRTRRLGTRGNSKYHYYG+R+K SPL RL ED Q+MAMR QP QKQR K
Sbjct: 482 KLIRSVFMGLRTRRLGTRGNSKYHYYGLRIKASSPLLRLMEDQQHMAMRGQPFSQKQRLK 541
Query: 287 PMQKVDGVADGFTGSGQQTGTSVEQTVIAQSQHHQQFLDASRALPEFGEVEISS--LPDG 344
P+QK++G+ +G GQQ T + + AQ Q +QQFLDASR+LP+F E+++ LP+G
Sbjct: 542 PIQKMEGMTNG-VAVGQQPSTGLSD-ISAQVQQYQQFLDASRSLPDFTELDLQGKVLPEG 599
Query: 345 TTFEDIKSLQSLYREHCEAILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGTTITESSNLS 404
DIK+ Q LYREHCEAI+DV+VNLQF+L+E LW+TFWRY+ S P++ +
Sbjct: 600 VGPGDIKAFQVLYREHCEAIVDVMVNLQFTLVETLWKTFWRYNLSQPSEAPPLAVHD--- 656
Query: 405 EIESRLPKAKLITLCKHESILKWMCNCDHGMYQALVEILIPDVLRPIPSALTQAIRNFAK 464
E E RLPKA L+ L K E +L+W +CD+ +YQ LVEILIPDVLRPIPSALTQAIRNFAK
Sbjct: 657 EAEKRLPKAILVLLSKFEPVLQWTKHCDNVLYQGLVEILIPDVLRPIPSALTQAIRNFAK 716
Query: 465 SLEGWLSNAMNNIPQRMIQTKVAAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLS 524
SLE WL++AM NIP+ M++ KVAA AFAQTLRRYTSLNHLAQAARAVLQNT+QINQMLS
Sbjct: 717 SLESWLTHAMVNIPEEMLRVKVAAAGAFAQTLRRYTSLNHLAQAARAVLQNTAQINQMLS 776
Query: 525 DLNRVDFANVQEQASWVCQCDDNMVQRLETDFKMTLQQQSTLEQWAAWLDNVMMQALKPY 584
DLNRVDFANVQEQASWVC+C+D +VQRLE DFK+TLQQQ++LEQWAAWLD V+ Q LKPY
Sbjct: 777 DLNRVDFANVQEQASWVCRCEDRVVQRLEQDFKVTLQQQNSLEQWAAWLDGVVSQVLKPY 836
Query: 585 EGRPSFPKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAQ 644
+G FPKAA+ FLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYM+YL+EHRVAQ
Sbjct: 837 QGSAGFPKAAKLFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMYYLIEHRVAQ 896
Query: 645 ATGETPIAVMGE 656
A GETPIAVMGE
Sbjct: 897 AKGETPIAVMGE 908
Score = 38.9 bits (89), Expect = 0.017
Identities = 28/63 (44%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 1 MQTSETGSDTGSTVTLQTSVASQAAVPTQVVQQVPVQQQVQQVQTVQQVQ--HVYPAQVQ 58
M+ SET S+ S ASQ VPTQVVQQV QQ VQT Q + HV P Q+
Sbjct: 110 MRASETVSEASPG-----STASQTGVPTQVVQQVQGTQQRLLVQTSVQAKPGHVSPLQLT 164
Query: 59 YVE 61
++
Sbjct: 165 NIQ 167
>gi|15011898 regulatory factor X4 isoform b [Homo sapiens]
Length = 563
Score = 278 bits (712), Expect = 1e-74
Identities = 172/485 (35%), Positives = 251/485 (51%), Gaps = 61/485 (12%)
Query: 184 LQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKLDPVNAASFGKLIRSIFMGLRTRRLGT 243
LQWL +NYE AEGV +PRS LY HYL C+++ PVNAASFGK+IR F L TRRLGT
Sbjct: 71 LQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQLTTRRLGT 130
Query: 244 RGNSKYHYYGIRVKPDSPLNRLQEDMQYMAMRQQPMQQKQRYKPMQKVDGVADGFTGSGQ 303
RG SKYHYYGI VK S Q Y M G A + +G+
Sbjct: 131 RGQSKYHYYGIAVKESS----------------------QYYDVMYSKKGAA-WVSETGK 167
Query: 304 QTGTSVEQTVIAQSQHHQQFLDASRALPEFGEVEISSLPDGTTFEDIKSLQSLYREHCEA 363
+ V + +A S + LPEF V+ +LP E + + +YR HC+
Sbjct: 168 K---EVSKQTVAYSPRSK----LGTLLPEFPNVKDLNLPASLPEEKVSTFIMMYRTHCQR 220
Query: 364 ILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGTTITESSNLSEIESRLPKAKLITLCKHES 423
ILD V+ F ++ FW+ P ++ + +
Sbjct: 221 ILDTVIRANFDEVQSFLLHFWQGMP------------------------PHMLPVLGSST 256
Query: 424 ILKWMCNCDHGMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLSNAMNNIPQRMIQ 483
++ + CD +Y+A+ +L+P VL+ +P +LTQ IR FAK L+ WL A++++P+ +
Sbjct: 257 VVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLRN 316
Query: 484 TKVAAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWVCQ 543
K F+Q LRR TSLNHL QA+R V+ + QML D VD ++ +Q + +
Sbjct: 317 IKFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTME 376
Query: 544 CDDN----MVQRLETDFKMTLQQQSTLEQWAAWLDNVMMQALKPYEGR--PSFPKAARQF 597
+ ++ +L +F L++QS +E + WLD ++ + + + S K A+QF
Sbjct: 377 DSRDEHRKLITQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQF 436
Query: 598 LLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEH-RVAQATGETPIAVMGE 656
LL WS + + VIRD+TL SA SFGSFHLI L++D+Y+ YL+E + E A+ GE
Sbjct: 437 LLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANELMRAMKGE 496
Query: 657 VREAE 661
AE
Sbjct: 497 GSTAE 501
>gi|47132527 regulatory factor X4 isoform c [Homo sapiens]
Length = 735
Score = 278 bits (712), Expect = 1e-74
Identities = 172/485 (35%), Positives = 251/485 (51%), Gaps = 61/485 (12%)
Query: 184 LQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKLDPVNAASFGKLIRSIFMGLRTRRLGT 243
LQWL +NYE AEGV +PRS LY HYL C+++ PVNAASFGK+IR F L TRRLGT
Sbjct: 62 LQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQLTTRRLGT 121
Query: 244 RGNSKYHYYGIRVKPDSPLNRLQEDMQYMAMRQQPMQQKQRYKPMQKVDGVADGFTGSGQ 303
RG SKYHYYGI VK S Q Y M G A + +G+
Sbjct: 122 RGQSKYHYYGIAVKESS----------------------QYYDVMYSKKGAA-WVSETGK 158
Query: 304 QTGTSVEQTVIAQSQHHQQFLDASRALPEFGEVEISSLPDGTTFEDIKSLQSLYREHCEA 363
+ V + +A S + LPEF V+ +LP E + + +YR HC+
Sbjct: 159 K---EVSKQTVAYSPRSK----LGTLLPEFPNVKDLNLPASLPEEKVSTFIMMYRTHCQR 211
Query: 364 ILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGTTITESSNLSEIESRLPKAKLITLCKHES 423
ILD V+ F ++ FW+ P ++ + +
Sbjct: 212 ILDTVIRANFDEVQSFLLHFWQGMP------------------------PHMLPVLGSST 247
Query: 424 ILKWMCNCDHGMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLSNAMNNIPQRMIQ 483
++ + CD +Y+A+ +L+P VL+ +P +LTQ IR FAK L+ WL A++++P+ +
Sbjct: 248 VVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLRN 307
Query: 484 TKVAAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWVCQ 543
K F+Q LRR TSLNHL QA+R V+ + QML D VD ++ +Q + +
Sbjct: 308 IKFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTME 367
Query: 544 CDDN----MVQRLETDFKMTLQQQSTLEQWAAWLDNVMMQALKPYEGR--PSFPKAARQF 597
+ ++ +L +F L++QS +E + WLD ++ + + + S K A+QF
Sbjct: 368 DSRDEHRKLITQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQF 427
Query: 598 LLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEH-RVAQATGETPIAVMGE 656
LL WS + + VIRD+TL SA SFGSFHLI L++D+Y+ YL+E + E A+ GE
Sbjct: 428 LLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANELMRAMKGE 487
Query: 657 VREAE 661
AE
Sbjct: 488 GSTAE 492
>gi|27734871 regulatory factor X, 6 [Homo sapiens]
Length = 928
Score = 247 bits (631), Expect = 2e-65
Identities = 158/468 (33%), Positives = 231/468 (49%), Gaps = 67/468 (14%)
Query: 184 LQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKLDPVNAASFGKLIRSIFMGLRTRRLGT 243
LQWL +NY EGV LPR LY HYL C++ KL+P AA+FGK IR F L TRRLGT
Sbjct: 125 LQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPLLTTRRLGT 184
Query: 244 RGNSKYHYYGIRVKPDSPLNRLQEDMQYMAMRQQPMQQKQRYKPMQKVDGVADGFTGSGQ 303
RG+SKYHYYGI +K S Y + G+ F+GS
Sbjct: 185 RGHSKYHYYGIGIKESSAY----------------------YHSVYSGKGLTR-FSGSKL 221
Query: 304 QTGTSVEQTVIAQSQHHQQFLDASRALPEFGEVEISSLPDGTTFEDIKSLQSLYREHCEA 363
+ + S+ LPEF + + + + +L +Y+ HC+
Sbjct: 222 KNEGGFTRKYSLSSK-------TGTLLPEFPSAQHLVYQGCISKDKVDTLIMMYKTHCQC 274
Query: 364 ILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGTTITESSNLSEIESRLPKAKLITLCKHES 423
ILD +N F I+ FW+ P L+ L ++
Sbjct: 275 ILDNAINGNFEEIQHFLLHFWQGMPD------------------------HLLPLLENPV 310
Query: 424 ILKWMCNCDHGMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLSNAMNNIPQRMIQ 483
I+ C CD +Y+ L ++LIP ++ +P +L IRNFAK+ E W+ +++ N+P+ +
Sbjct: 311 IIDIFCVCDSILYKVLTDVLIPATMQEMPESLLADIRNFAKNWEQWVVSSLENLPEALTD 370
Query: 484 TKVAAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWVCQ 543
K+ V F +L+R TS HLAQ AR L + +N M+SD+ RVD ++ QA
Sbjct: 371 KKIPIVRRFVSSLKRQTSFLHLAQIARPALFDQHVVNSMVSDIERVDLNSIGSQALLTIS 430
Query: 544 CDDNMVQRLET---------DFKMTLQQQSTLEQWAAWLDNVMMQAL---KPYEGRPSFP 591
+ + T + K L++ +T+E + WLD V+ Q + GR S
Sbjct: 431 GSTDTESGIYTEHDSITVFQELKDLLKKNATVEAFIEWLDTVVEQRVIKTSKQNGR-SLK 489
Query: 592 KAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVE 639
K A+ FLLKWSF+ + V+ +LTL +A+SFGSFHLIR+L DEY+ +E
Sbjct: 490 KRAQDFLLKWSFFGARVMHNLTLNNASSFGSFHLIRMLLDEYILLAME 537
>gi|19743886 regulatory factor X4 isoform a [Homo sapiens]
Length = 641
Score = 193 bits (491), Expect = 4e-49
Identities = 129/420 (30%), Positives = 202/420 (48%), Gaps = 61/420 (14%)
Query: 249 YHYYGIRVKPDSPLNRLQEDMQYMAMRQQPMQQKQRYKPMQKVDGVADGFTGSGQQTGTS 308
YHYYGI VK S Q Y M G A + +G++
Sbjct: 33 YHYYGIAVKESS----------------------QYYDVMYSKKGAA-WVSETGKK---E 66
Query: 309 VEQTVIAQSQHHQQFLDASRALPEFGEVEISSLPDGTTFEDIKSLQSLYREHCEAILDVV 368
V + +A S + LPEF V+ +LP E + + +YR HC+ ILD V
Sbjct: 67 VSKQTVAYSPRSK----LGTLLPEFPNVKDLNLPASLPEEKVSTFIMMYRTHCQRILDTV 122
Query: 369 VNLQFSLIEKLWQTFWRYSPSTPTDGTTITESSNLSEIESRLPKAKLITLCKHESILKWM 428
+ F ++ FW+ P ++ + +++ +
Sbjct: 123 IRANFDEVQSFLLHFWQGMP------------------------PHMLPVLGSSTVVNIV 158
Query: 429 CNCDHGMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLSNAMNNIPQRMIQTKVAA 488
CD +Y+A+ +L+P VL+ +P +LTQ IR FAK L+ WL A++++P+ + K
Sbjct: 159 GVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLRNIKFEL 218
Query: 489 VSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWVCQCDDN- 547
F+Q LRR TSLNHL QA+R V+ + QML D VD ++ +Q + + +
Sbjct: 219 SRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTMEDSRDE 278
Query: 548 ---MVQRLETDFKMTLQQQSTLEQWAAWLDNVMMQALKPYEGR--PSFPKAARQFLLKWS 602
++ +L +F L++QS +E + WLD ++ + + + S K A+QFLL WS
Sbjct: 279 HRKLITQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQFLLMWS 338
Query: 603 FYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEH-RVAQATGETPIAVMGEVREAE 661
+ + VIRD+TL SA SFGSFHLI L++D+Y+ YL+E + E A+ GE AE
Sbjct: 339 CFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANELMRAMKGEGSTAE 398
>gi|224586784 hypothetical protein LOC731220 [Homo sapiens]
Length = 473
Score = 85.1 bits (209), Expect = 2e-16
Identities = 59/237 (24%), Positives = 114/237 (48%), Gaps = 12/237 (5%)
Query: 432 DHGMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLSNAMNNIPQRMIQTKVAAVSA 491
D +Y+ + ++L+ D L + ++++ F+K + WL NA+ +P + +K+ V+
Sbjct: 112 DVQLYKGIEDVLLHDFLEDVSIQYLKSVQLFSKKFKLWLLNALEGVPALLQISKLKEVTL 171
Query: 492 FAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWVCQCDDNMVQR 551
F + LRR T L+++A+ R VL++ +++ + SDL + + D +
Sbjct: 172 FVKRLRRKTYLSNMAKTMRMVLKSKRRVSVLKSDLQAIINQGTLATSKKALASDRSGADE 231
Query: 552 LETDFKM--------TLQQQSTLEQWAAWLDNVMMQ-ALKPYEGRPSFPKAARQFLLKWS 602
LE + +M L + L + + L + + + + F K A F L+W+
Sbjct: 232 LENNPEMKCLRNLISLLGTSTDLRVFLSCLSSHLQAFVFQTSRSKEEFTKLAASFQLRWN 291
Query: 603 FYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAQATGETPIAVMGEVRE 659
+ V + +TL SFGS+HL LL EYM ++++ + + E MG V+E
Sbjct: 292 LLLTAVSKAMTLCHRDSFGSWHLFHLLLLEYMIHILQSCLEEEEEEED---MGTVKE 345
>gi|148613886 regulatory factor X domain containing 2 [Homo sapiens]
Length = 1460
Score = 70.1 bits (170), Expect = 7e-12
Identities = 34/93 (36%), Positives = 57/93 (61%), Gaps = 3/93 (3%)
Query: 167 QKSD--GLSTHRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKLDPVNAAS 224
+KSD +S+ R+ +++ W+ + E SLP+ +Y+ Y +C P++AA
Sbjct: 91 EKSDQNAMSSSRAQQMHA-FSWIRNTLEEHPETSLPKQEVYDEYKSYCDNLGYHPLSAAD 149
Query: 225 FGKLIRSIFMGLRTRRLGTRGNSKYHYYGIRVK 257
FGK+++++F ++ RRLGTRG SKY Y G+R K
Sbjct: 150 FGKIMKNVFPNMKARRLGTRGKSKYCYSGLRKK 182
>gi|71040090 regulatory factor X, 5 [Homo sapiens]
Length = 616
Score = 62.8 bits (151), Expect = 1e-09
Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 185 QWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKL-DPVNAASFGKLIRSIFMGLRTRRLGT 243
+W+ ++ E LP+ ++Y+ Y ++C+ P++ A+FGK+IR IF ++ RRLG
Sbjct: 94 RWIRNHLEEHTDTCLPKQSVYDAYRKYCESLACCRPLSTANFGKIIREIFPDIKARRLGG 153
Query: 244 RGNSKYHYYGIRVK 257
RG SKY Y GIR K
Sbjct: 154 RGQSKYCYSGIRRK 167
>gi|4557843 regulatory factor X, 5 [Homo sapiens]
Length = 616
Score = 62.8 bits (151), Expect = 1e-09
Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 185 QWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKL-DPVNAASFGKLIRSIFMGLRTRRLGT 243
+W+ ++ E LP+ ++Y+ Y ++C+ P++ A+FGK+IR IF ++ RRLG
Sbjct: 94 RWIRNHLEEHTDTCLPKQSVYDAYRKYCESLACCRPLSTANFGKIIREIFPDIKARRLGG 153
Query: 244 RGNSKYHYYGIRVK 257
RG SKY Y GIR K
Sbjct: 154 RGQSKYCYSGIRRK 167
>gi|217272829 nuclear transcription factor Y, gamma isoform 3 [Homo
sapiens]
Length = 334
Score = 39.7 bits (91), Expect = 0.010
Identities = 32/97 (32%), Positives = 43/97 (44%), Gaps = 7/97 (7%)
Query: 2 QTSETGSDTGSTVTLQTSVASQAAVPTQVVQQVPVQQQVQQVQTVQQVQHVYPAQVQYVE 61
Q + S TG T+ V Q T +QQ+PVQ Q+Q ++ Q V QV V+
Sbjct: 211 QAQQAQSGTGQTM----QVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQV--VQ 264
Query: 62 GS-DTVYTNGAIRTTTYPYTETQMYSQNTGGNYFDTQ 97
G T+ TN T T Q +SQ T G + Q
Sbjct: 265 GQIQTLATNAQQITQTEVQQGQQQFSQFTDGQLYQIQ 301
>gi|217272833 nuclear transcription factor Y, gamma isoform 4 [Homo
sapiens]
Length = 297
Score = 37.4 bits (85), Expect = 0.048
Identities = 31/91 (34%), Positives = 41/91 (45%), Gaps = 7/91 (7%)
Query: 2 QTSETGSDTGSTVTLQTSVASQAAVPTQVVQQVPVQQQVQQVQTVQQVQHVYPAQVQYVE 61
Q + S TG T+ V Q T +QQ+PVQ Q+Q ++ Q V QV V+
Sbjct: 173 QAQQAQSGTGQTM----QVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQV--VQ 226
Query: 62 GS-DTVYTNGAIRTTTYPYTETQMYSQNTGG 91
G T+ TN T T Q +SQ T G
Sbjct: 227 GQIQTLATNAQQITQTEVQQGQQQFSQFTDG 257
>gi|11496978 nuclear transcription factor Y, gamma isoform 2 [Homo
sapiens]
Length = 335
Score = 37.4 bits (85), Expect = 0.048
Identities = 31/91 (34%), Positives = 41/91 (45%), Gaps = 7/91 (7%)
Query: 2 QTSETGSDTGSTVTLQTSVASQAAVPTQVVQQVPVQQQVQQVQTVQQVQHVYPAQVQYVE 61
Q + S TG T+ V Q T +QQ+PVQ Q+Q ++ Q V QV V+
Sbjct: 211 QAQQAQSGTGQTM----QVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQV--VQ 264
Query: 62 GS-DTVYTNGAIRTTTYPYTETQMYSQNTGG 91
G T+ TN T T Q +SQ T G
Sbjct: 265 GQIQTLATNAQQITQTEVQQGQQQFSQFTDG 295
>gi|41349464 PR domain containing 10 isoform 4 [Homo sapiens]
Length = 1023
Score = 36.2 bits (82), Expect = 0.11
Identities = 36/147 (24%), Positives = 60/147 (40%), Gaps = 12/147 (8%)
Query: 3 TSETGSDTGSTVTLQTSVASQAAVPTQVVQQVPVQQQVQQVQTVQQVQHVYPAQVQYVEG 62
T++ + G +Q SQ+A Q Q + Q QV QV +V Q + P+ Q +G
Sbjct: 821 TTDYRTPQGDYQRIQYIPVSQSASGLQQPQHI--QLQVVQVASVSG-QPLSPSAQQAQQG 877
Query: 63 SDTVYTNGAIRTTTYPYTETQMYSQNTG---------GNYFDTQGSSAQVTTVVSSHSMV 113
+ G+ T + Q QN+ N F S Q+ T+ ++
Sbjct: 878 LSPSHIQGSSSTQGQALQQQQQQQQNSSVQHTYLPSAWNSFRGYSSEIQMMTLPPGQFVI 937
Query: 114 GTGGIQMGVTGGQLISSSGGTYLIGNS 140
G+ VT GQ+ + + G Y++ S
Sbjct: 938 TDSGVATPVTTGQVKAVTSGHYVLSES 964
>gi|56549668 AT rich interactive domain 2 (ARID, RFX-like) [Homo
sapiens]
Length = 1835
Score = 34.7 bits (78), Expect = 0.31
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 20/141 (14%)
Query: 185 QWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKLDPV-NAASFGKLIRSIFMGLRTRRL-G 242
QWL ++E S+ R+ +Y+ YL C + + + F K +R++F +R+
Sbjct: 526 QWLNAHFEVNPDCSVSRAEMYSEYLSTCSKLARGGILTSTGFYKCLRTVFPNHTVKRVED 585
Query: 243 TRGNSKYHYYGIRVKPDSPLNRLQEDMQYMAMRQQPMQQKQRYKPMQKVDGVAD------ 296
+ N + H + + VK + +Q M +QQP+ + +VD V D
Sbjct: 586 SSSNGQAHIHVVGVKRRAIPLPIQ-----MYYQQQPVSTS-----VVRVDSVPDVSPAPS 635
Query: 297 --GFTGSGQQTGTSVEQTVIA 315
G Q G ++T +A
Sbjct: 636 PAGIPHGSQTIGNHFQRTPVA 656
Score = 31.2 bits (69), Expect = 3.5
Identities = 31/140 (22%), Positives = 55/140 (39%), Gaps = 9/140 (6%)
Query: 1 MQTSETGSDTGSTVTLQTSVASQAAVPTQ------VVQQVPVQQQVQQVQTVQQVQHVYP 54
+Q TG + V QT + + +P Q V Q+P V +Q H++
Sbjct: 744 VQNHSTGPQPVTVVNSQTLLHHPSVIPQQSPLHTVVPGQIPSGTPVTVIQQAVPQSHMF- 802
Query: 55 AQVQYVEGSDTVYTNGAIRTTTYPY-TETQMYSQNTGGNYFDTQGSSAQVTTVVSSHSMV 113
+VQ + + + G TT P +T + G DT + S+ ++V
Sbjct: 803 GRVQNIPACTSTVSQGQQLITTSPQPVQTSSQQTSAGSQSQDTVIIAPPQYVTTSASNIV 862
Query: 114 GTGGIQ-MGVTGGQLISSSG 132
+Q V GQ+++ +G
Sbjct: 863 SATSVQNFQVATGQMVTIAG 882
>gi|41349462 PR domain containing 10 isoform 3 [Homo sapiens]
Length = 1061
Score = 34.7 bits (78), Expect = 0.31
Identities = 36/157 (22%), Positives = 57/157 (36%), Gaps = 20/157 (12%)
Query: 4 SETGSDTGSTVTLQTSVASQAAVPTQVVQQV----------PVQQQVQQVQTVQ-QVQHV 52
S +G + LQ + A P Q Q P Q QVQ +Q Q +
Sbjct: 846 SASGLQQPQHIQLQVVQVASATSPHQSQQSTVDVGQLHDPQPYPQHAIQVQHIQVSGQPL 905
Query: 53 YPAQVQYVEGSDTVYTNGAIRTTTYPYTETQMYSQNTG---------GNYFDTQGSSAQV 103
P+ Q +G + G+ T + Q QN+ N F S Q+
Sbjct: 906 SPSAQQAQQGLSPSHIQGSSSTQGQALQQQQQQQQNSSVQHTYLPSAWNSFRGYSSEIQM 965
Query: 104 TTVVSSHSMVGTGGIQMGVTGGQLISSSGGTYLIGNS 140
T+ ++ G+ VT GQ+ + + G Y++ S
Sbjct: 966 MTLPPGQFVITDSGVATPVTTGQVKAVTSGHYVLSES 1002
>gi|161016767 mucin 21 [Homo sapiens]
Length = 566
Score = 34.3 bits (77), Expect = 0.41
Identities = 41/193 (21%), Positives = 68/193 (35%), Gaps = 4/193 (2%)
Query: 4 SETGSDTGSTVTLQTSVASQAAVPTQVVQQVPVQQQVQQVQTVQQVQHVYPAQVQYVEGS 63
S T S ST T S + T + T + V + + V S
Sbjct: 230 SSTTSSGASTATNSESSTPSSGAGTATNSESSTTSSGAGTATNSESSTV-SSGISTVTNS 288
Query: 64 DTVYTNGAIRTTTYPYTETQMYSQNTGGNYFDTQGSSAQVTTVVSSHSMVGTGGIQMGVT 123
++ + T T + T NT N D+ +S+ +T +S S + G
Sbjct: 289 ESSTPSSGANTATNSESSTTSSGANTATNS-DSSTTSSGASTATNSESSTTSSGASTATN 347
Query: 124 GGQLISSSGGTYLI--GNSMENSGHSVTHTTRASPATIEMAIETLQKSDGLSTHRSSLLN 181
+SSG + G+S +SG S + +S + + T +S S+ S+ N
Sbjct: 348 SESSTTSSGASTATNSGSSTTSSGTSTATNSESSTVSSGASTATTSESSTTSSGASTATN 407
Query: 182 SHLQWLLDNYETA 194
S + TA
Sbjct: 408 SESSTVSSGASTA 420
>gi|217272835 nuclear transcription factor Y, gamma isoform 5 [Homo
sapiens]
Length = 301
Score = 33.5 bits (75), Expect = 0.70
Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 20 VASQAAVPTQVVQQVPVQQQVQQVQTVQQVQHVYPAQVQYVEGS-DTVYTNGAIRTTTYP 78
V Q T +QQ+PVQ Q+Q ++ Q V QV V+G T+ TN T T
Sbjct: 191 VMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQV--VQGQIQTLATNAQQITQTEV 248
Query: 79 YTETQMYSQNTGG 91
Q +SQ T G
Sbjct: 249 QQGQQQFSQFTDG 261
>gi|54792088 hypothetical protein LOC23506 [Homo sapiens]
Length = 1079
Score = 33.5 bits (75), Expect = 0.70
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 14/129 (10%)
Query: 3 TSETGSDTGSTVTLQTSVA------SQAAVPTQVVQQVPVQQQVQQVQTVQ-QVQHVYPA 55
TS+ S TG ++ + + + SQ +PT + V VQT+ Q+ P+
Sbjct: 374 TSQAVSSTGGSIVIHSPMGQPHAPQSQFLIPTSLSVS---SNSVHHVQTINGQLLQTQPS 430
Query: 56 Q-VQYVEGSDTVYTN---GAIRTTTYPYTETQMYSQNTGGNYFDTQGSSAQVTTVVSSHS 111
Q + S+ V N + T PYT + +QNT + Q +A + V+++H+
Sbjct: 431 QLISGQVASEHVMLNRNSSNMLRTNQPYTGPMLNNQNTAVHLVSGQTFAASGSPVIANHA 490
Query: 112 MVGTGGIQM 120
G QM
Sbjct: 491 SPQLVGGQM 499
>gi|41349460 PR domain containing 10 isoform 2 [Homo sapiens]
Length = 1156
Score = 32.3 bits (72), Expect = 1.6
Identities = 29/122 (23%), Positives = 48/122 (39%), Gaps = 12/122 (9%)
Query: 19 SVASQAAVPTQVVQQVPVQQQVQQVQTVQQVQHVYPAQVQYVEGSDTVYTNGAIRTTTYP 78
S S A V Q + P QQ QQ + +Q Q Q ++ N +++ T P
Sbjct: 988 SAPSSAQVSGQPLS--PSAQQAQQGLSPSHIQGSSSTQGQALQQQQQQQQNSSVQHTYLP 1045
Query: 79 YTETQMYSQNTGGNYFDTQGSSAQVTTVVSSHSMVGTGGIQMGVTGGQLISSSGGTYLIG 138
+ N F S Q+ T+ ++ G+ VT GQ+ + + G Y++
Sbjct: 1046 ----------SAWNSFRGYSSEIQMMTLPPGQFVITDSGVATPVTTGQVKAVTSGHYVLS 1095
Query: 139 NS 140
S
Sbjct: 1096 ES 1097
>gi|41349458 PR domain containing 10 isoform 1 [Homo sapiens]
Length = 1160
Score = 32.3 bits (72), Expect = 1.6
Identities = 29/122 (23%), Positives = 48/122 (39%), Gaps = 12/122 (9%)
Query: 19 SVASQAAVPTQVVQQVPVQQQVQQVQTVQQVQHVYPAQVQYVEGSDTVYTNGAIRTTTYP 78
S S A V Q + P QQ QQ + +Q Q Q ++ N +++ T P
Sbjct: 992 SAPSSAQVSGQPLS--PSAQQAQQGLSPSHIQGSSSTQGQALQQQQQQQQNSSVQHTYLP 1049
Query: 79 YTETQMYSQNTGGNYFDTQGSSAQVTTVVSSHSMVGTGGIQMGVTGGQLISSSGGTYLIG 138
+ N F S Q+ T+ ++ G+ VT GQ+ + + G Y++
Sbjct: 1050 ----------SAWNSFRGYSSEIQMMTLPPGQFVITDSGVATPVTTGQVKAVTSGHYVLS 1099
Query: 139 NS 140
S
Sbjct: 1100 ES 1101
>gi|33457336 chromosome 14 open reading frame 4 [Homo sapiens]
Length = 796
Score = 32.0 bits (71), Expect = 2.0
Identities = 18/45 (40%), Positives = 23/45 (51%)
Query: 19 SVASQAAVPTQVVQQVPVQQQVQQVQTVQQVQHVYPAQVQYVEGS 63
+ A+ AA QQ QQQ QQ Q QQ Q Q+ +V+GS
Sbjct: 90 AAAAAAAAAAAAAQQQQQQQQQQQQQQQQQQQQQQQQQLNHVDGS 134
>gi|119703744 desmoglein 1 preproprotein [Homo sapiens]
Length = 1049
Score = 31.6 bits (70), Expect = 2.6
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 98 GSSAQVTTVVSSHSMVGTGGIQMGVTGGQL-ISSSGGTYLIGNSMENSGHSVTHTT-RAS 155
GSS V T + + S +G G++GG + +SS GGT IG+ +S H T AS
Sbjct: 975 GSSGLVGTSMGAGSGALSGA---GISGGGIGLSSLGGTASIGHMRSSSDHHFNQTIGSAS 1031
Query: 156 PATIEMAI 163
P+T I
Sbjct: 1032 PSTARSRI 1039
>gi|239755778 PREDICTED: mucin 19, oligomeric [Homo sapiens]
Length = 598
Score = 30.8 bits (68), Expect = 4.5
Identities = 46/170 (27%), Positives = 62/170 (36%), Gaps = 33/170 (19%)
Query: 6 TGSDTGST-VTLQTSVA-----SQAAVPTQVVQQVPVQQQVQQVQTVQQVQHVYPAQVQY 59
TGS TG+T V L T+VA ++A T V + V Q+
Sbjct: 47 TGSKTGTTGVALSTTVAPGSSSTEATTSTGVHRTTVVGQKTGAT---------------- 90
Query: 60 VEGSDTVYTNGAIR-TTTYPYTETQMYSQNTG------GNYFDTQGSSAQVTTVVSSH-- 110
GS T I TT++ T T NTG GN + + T+ S
Sbjct: 91 TRGSAKQGTRSTIEATTSFRGTGTTGSGMNTGTTGVVSGNTISPSSFNTEATSGTSERPN 150
Query: 111 --SMVGTGGIQMGVTGGQLISSSGGTYLIGNSMENSGHSVTHTTRASPAT 158
S +GT GI G T S++ T +GN S TT + T
Sbjct: 151 PGSEIGTTGIVSGTTVAPGSSNTEATTSLGNGGTTEAGSKIVTTGITTGT 200
>gi|239750280 PREDICTED: mucin 19, oligomeric [Homo sapiens]
Length = 598
Score = 30.8 bits (68), Expect = 4.5
Identities = 46/170 (27%), Positives = 62/170 (36%), Gaps = 33/170 (19%)
Query: 6 TGSDTGST-VTLQTSVA-----SQAAVPTQVVQQVPVQQQVQQVQTVQQVQHVYPAQVQY 59
TGS TG+T V L T+VA ++A T V + V Q+
Sbjct: 47 TGSKTGTTGVALSTTVAPGSSSTEATTSTGVHRTTVVGQKTGAT---------------- 90
Query: 60 VEGSDTVYTNGAIR-TTTYPYTETQMYSQNTG------GNYFDTQGSSAQVTTVVSSH-- 110
GS T I TT++ T T NTG GN + + T+ S
Sbjct: 91 TRGSAKQGTRSTIEATTSFRGTGTTGSGMNTGTTGVVSGNTISPSSFNTEATSGTSERPN 150
Query: 111 --SMVGTGGIQMGVTGGQLISSSGGTYLIGNSMENSGHSVTHTTRASPAT 158
S +GT GI G T S++ T +GN S TT + T
Sbjct: 151 PGSEIGTTGIVSGTTVAPGSSNTEATTSLGNGGTTEAGSKIVTTGITTGT 200
>gi|239744589 PREDICTED: mucin 19 [Homo sapiens]
Length = 598
Score = 30.8 bits (68), Expect = 4.5
Identities = 46/170 (27%), Positives = 62/170 (36%), Gaps = 33/170 (19%)
Query: 6 TGSDTGST-VTLQTSVA-----SQAAVPTQVVQQVPVQQQVQQVQTVQQVQHVYPAQVQY 59
TGS TG+T V L T+VA ++A T V + V Q+
Sbjct: 47 TGSKTGTTGVALSTTVAPGSSSTEATTSTGVHRTTVVGQKTGAT---------------- 90
Query: 60 VEGSDTVYTNGAIR-TTTYPYTETQMYSQNTG------GNYFDTQGSSAQVTTVVSSH-- 110
GS T I TT++ T T NTG GN + + T+ S
Sbjct: 91 TRGSAKQGTRSTIEATTSFRGTGTTGSGMNTGTTGVVSGNTISPSSFNTEATSGTSERPN 150
Query: 111 --SMVGTGGIQMGVTGGQLISSSGGTYLIGNSMENSGHSVTHTTRASPAT 158
S +GT GI G T S++ T +GN S TT + T
Sbjct: 151 PGSEIGTTGIVSGTTVAPGSSNTEATTSLGNGGTTEAGSKIVTTGITTGT 200
>gi|170650685 zinc finger and BTB domain containing 37 isoform a
[Homo sapiens]
Length = 503
Score = 30.8 bits (68), Expect = 4.5
Identities = 19/85 (22%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 440 VEILIPDVLRPIPSALTQAIRNFAKSLEGWLSNAMNNIPQRMIQTKVAAVSAFAQTLRRY 499
+++ IPD + S L Q ++G L + + N+ + + ++A + R +
Sbjct: 7 IQLEIPDFSNSVLSHLNQL------RMQGRLCDIVVNVQGQAFRAHKVVLAASSPYFRDH 60
Query: 500 TSLNHLAQAARAVLQNTSQINQMLS 524
SLN ++ + +V++N + Q+LS
Sbjct: 61 MSLNEMSTVSISVIKNPTVFEQLLS 85
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.129 0.373
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,158,585
Number of Sequences: 37866
Number of extensions: 982685
Number of successful extensions: 3615
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 3467
Number of HSP's gapped (non-prelim): 131
length of query: 707
length of database: 18,247,518
effective HSP length: 109
effective length of query: 598
effective length of database: 14,120,124
effective search space: 8443834152
effective search space used: 8443834152
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.