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Search of human proteins with 4506283
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4506283 protein tyrosine phosphatase type IVA, member 1
[Homo sapiens]
(173 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4506283 protein tyrosine phosphatase type IVA, member 1 [Homo... 360 e-100
gi|18104971 protein tyrosine phosphatase type IVA, member 2 isof... 315 1e-86
gi|169162376 PREDICTED: similar to protein tyrosine phosphatase ... 301 1e-82
gi|14589856 protein tyrosine phosphatase type IVA, member 3 isof... 292 1e-79
gi|14589854 protein tyrosine phosphatase type IVA, member 3 isof... 234 3e-62
gi|239753025 PREDICTED: similar to protein tyrosine phosphatase ... 228 2e-60
gi|18104973 protein tyrosine phosphatase type IVA, member 2 isof... 116 8e-27
gi|116008458 CDC14 homolog B isoform 3 [Homo sapiens] 55 2e-08
gi|4502699 CDC14 homolog B isoform 1 [Homo sapiens] 55 2e-08
gi|15451936 CDC14 homolog B isoform 2 [Homo sapiens] 55 2e-08
gi|15451933 CDC14 homolog A isoform 3 [Homo sapiens] 53 1e-07
gi|15451929 CDC14 homolog A isoform 1 [Homo sapiens] 53 1e-07
gi|15451931 CDC14 homolog A isoform 2 [Homo sapiens] 53 1e-07
gi|73765544 phosphatase and tensin homolog [Homo sapiens] 44 7e-05
gi|30089952 protein tyrosine phosphatase domain containing 1 pro... 41 5e-04
gi|30089950 protein tyrosine phosphatase domain containing 1 pro... 41 5e-04
gi|104487611 protein tyrosine phosphatase, receptor type, sigma ... 41 6e-04
gi|104487297 protein tyrosine phosphatase, receptor type, sigma ... 41 6e-04
gi|104487295 protein tyrosine phosphatase, receptor type, sigma ... 41 6e-04
gi|104487006 protein tyrosine phosphatase, receptor type, sigma ... 41 6e-04
gi|104487002 protein tyrosine phosphatase, receptor type, D isof... 41 6e-04
gi|4506309 protein tyrosine phosphatase, receptor type, D isofor... 41 6e-04
gi|18860890 protein tyrosine phosphatase, receptor type, D isofo... 41 6e-04
gi|18860892 protein tyrosine phosphatase, receptor type, D isofo... 41 6e-04
gi|18860894 protein tyrosine phosphatase, receptor type, D isofo... 41 6e-04
gi|196114970 protein tyrosine phosphatase, non-receptor type 12 ... 39 0.002
gi|196114967 protein tyrosine phosphatase, non-receptor type 12 ... 39 0.002
gi|196114951 protein tyrosine phosphatase, non-receptor type 12 ... 39 0.002
gi|109633041 protein tyrosine phosphatase, receptor type, F isof... 39 0.002
gi|109633039 protein tyrosine phosphatase, receptor type, F isof... 39 0.002
>gi|4506283 protein tyrosine phosphatase type IVA, member 1 [Homo
sapiens]
Length = 173
Score = 360 bits (923), Expect = e-100
Identities = 173/173 (100%), Positives = 173/173 (100%)
Query: 1 MARMNRPAPVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEK 60
MARMNRPAPVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEK
Sbjct: 1 MARMNRPAPVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEK 60
Query: 61 EGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALI 120
EGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALI
Sbjct: 61 EGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALI 120
Query: 121 EGGMKYEDAVQFIRQKRRGAFNSKQLLYLEKYRPKMRLRFKDSNGHRNNCCIQ 173
EGGMKYEDAVQFIRQKRRGAFNSKQLLYLEKYRPKMRLRFKDSNGHRNNCCIQ
Sbjct: 121 EGGMKYEDAVQFIRQKRRGAFNSKQLLYLEKYRPKMRLRFKDSNGHRNNCCIQ 173
>gi|18104971 protein tyrosine phosphatase type IVA, member 2 isoform
1 [Homo sapiens]
Length = 167
Score = 315 bits (808), Expect = 1e-86
Identities = 149/170 (87%), Positives = 160/170 (94%), Gaps = 3/170 (1%)
Query: 4 MNRPAPVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEKEGI 63
MNRPAPVE++Y+NMRFLITHNPTNATLNKF EELKKYGVTT+VRVC+ATYD VEKEGI
Sbjct: 1 MNRPAPVEISYENMRFLITHNPTNATLNKFTEELKKYGVTTLVRVCDATYDKAPVEKEGI 60
Query: 64 HVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALIEGG 123
HVLDWPFDDGAPP NQIVDDWL+L+K KFREEPGCC+AVHCVAGLGRAPVLVALALIE G
Sbjct: 61 HVLDWPFDDGAPPPNQIVDDWLNLLKTKFREEPGCCVAVHCVAGLGRAPVLVALALIECG 120
Query: 124 MKYEDAVQFIRQKRRGAFNSKQLLYLEKYRPKMRLRFKDSNGHRNNCCIQ 173
MKYEDAVQFIRQKRRGAFNSKQLLYLEKYRPKMRLRF+D+NGH CC+Q
Sbjct: 121 MKYEDAVQFIRQKRRGAFNSKQLLYLEKYRPKMRLRFRDTNGH---CCVQ 167
>gi|169162376 PREDICTED: similar to protein tyrosine phosphatase 4a1
isoform 1 [Homo sapiens]
Length = 170
Score = 301 bits (772), Expect = 1e-82
Identities = 145/170 (85%), Positives = 152/170 (89%)
Query: 4 MNRPAPVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEKEGI 63
MN PAPV+VTYKNMRF ITHNPTN TLNKFIEELKKYG TTIVRVCEATYDTTLVEKEGI
Sbjct: 1 MNHPAPVKVTYKNMRFPITHNPTNVTLNKFIEELKKYGATTIVRVCEATYDTTLVEKEGI 60
Query: 64 HVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALIEGG 123
HVL+WPF DGAPPSNQIV DWL VKIKF EEPGC IAV+C+ GLG+APVLVALA +EGG
Sbjct: 61 HVLNWPFGDGAPPSNQIVADWLHFVKIKFCEEPGCYIAVNCIVGLGKAPVLVALASVEGG 120
Query: 124 MKYEDAVQFIRQKRRGAFNSKQLLYLEKYRPKMRLRFKDSNGHRNNCCIQ 173
MK+EDAVQFI QKR GAF SKQLLYLEKY PKMRLRFKDSN H NNCCIQ
Sbjct: 121 MKHEDAVQFIGQKRSGAFKSKQLLYLEKYHPKMRLRFKDSNSHINNCCIQ 170
>gi|14589856 protein tyrosine phosphatase type IVA, member 3 isoform
1 [Homo sapiens]
Length = 173
Score = 292 bits (747), Expect = 1e-79
Identities = 136/172 (79%), Positives = 152/172 (88%)
Query: 1 MARMNRPAPVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEK 60
MARMNRPAPVEV+YK+MRFLITHNPTNATL+ FIE+LKKYG TT+VRVCE TYD T +EK
Sbjct: 1 MARMNRPAPVEVSYKHMRFLITHNPTNATLSTFIEDLKKYGATTVVRVCEVTYDKTPLEK 60
Query: 61 EGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALI 120
+GI V+DWPFDDGAPP ++V+DWLSLVK KF E PG C+AVHCVAGLGRAPVLVALALI
Sbjct: 61 DGITVVDWPFDDGAPPPGKVVEDWLSLVKAKFCEAPGSCVAVHCVAGLGRAPVLVALALI 120
Query: 121 EGGMKYEDAVQFIRQKRRGAFNSKQLLYLEKYRPKMRLRFKDSNGHRNNCCI 172
E GMKYEDA+QFIRQKRRGA NSKQL YLEKYRPK RLRFKD + H+ CC+
Sbjct: 121 ESGMKYEDAIQFIRQKRRGAINSKQLTYLEKYRPKQRLRFKDPHTHKTRCCV 172
>gi|14589854 protein tyrosine phosphatase type IVA, member 3 isoform
2 [Homo sapiens]
Length = 148
Score = 234 bits (597), Expect = 3e-62
Identities = 113/172 (65%), Positives = 128/172 (74%), Gaps = 25/172 (14%)
Query: 1 MARMNRPAPVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEK 60
MARMNRPAPVEV+YK+MRFLITHNPTNATL+ FIE+LKKYG TT+VRVCE TYD T +EK
Sbjct: 1 MARMNRPAPVEVSYKHMRFLITHNPTNATLSTFIEDLKKYGATTVVRVCEVTYDKTPLEK 60
Query: 61 EGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALI 120
+GI V+DWPFDDGAPP ++V+DWLSLVK KF E PG C+AVHCVAGLGR
Sbjct: 61 DGITVVDWPFDDGAPPPGKVVEDWLSLVKAKFCEAPGSCVAVHCVAGLGR---------- 110
Query: 121 EGGMKYEDAVQFIRQKRRGAFNSKQLLYLEKYRPKMRLRFKDSNGHRNNCCI 172
KRRGA NSKQL YLEKYRPK RLRFKD + H+ CC+
Sbjct: 111 ---------------KRRGAINSKQLTYLEKYRPKQRLRFKDPHTHKTRCCV 147
>gi|239753025 PREDICTED: similar to protein tyrosine phosphatase 4a1
isoform 2 [Homo sapiens]
Length = 139
Score = 228 bits (581), Expect = 2e-60
Identities = 116/170 (68%), Positives = 122/170 (71%), Gaps = 31/170 (18%)
Query: 4 MNRPAPVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEKEGI 63
MN PAPV+VTYKNMRF ITHNPTN TLNKFIE
Sbjct: 1 MNHPAPVKVTYKNMRFPITHNPTNVTLNKFIE---------------------------- 32
Query: 64 HVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALIEGG 123
DWPF DGAPPSNQIV DWL VKIKF EEPGC IAV+C+ GLG+APVLVALA +EGG
Sbjct: 33 ---DWPFGDGAPPSNQIVADWLHFVKIKFCEEPGCYIAVNCIVGLGKAPVLVALASVEGG 89
Query: 124 MKYEDAVQFIRQKRRGAFNSKQLLYLEKYRPKMRLRFKDSNGHRNNCCIQ 173
MK+EDAVQFI QKR GAF SKQLLYLEKY PKMRLRFKDSN H NNCCIQ
Sbjct: 90 MKHEDAVQFIGQKRSGAFKSKQLLYLEKYHPKMRLRFKDSNSHINNCCIQ 139
>gi|18104973 protein tyrosine phosphatase type IVA, member 2
isoform 2 [Homo sapiens]
Length = 82
Score = 116 bits (291), Expect = 8e-27
Identities = 54/63 (85%), Positives = 59/63 (93%)
Query: 4 MNRPAPVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEKEGI 63
MNRPAPVE++Y+NMRFLITHNPTNATLNKF EELKKYGVTT+VRVC+ATYD VEKEGI
Sbjct: 1 MNRPAPVEISYENMRFLITHNPTNATLNKFTEELKKYGVTTLVRVCDATYDKAPVEKEGI 60
Query: 64 HVL 66
HVL
Sbjct: 61 HVL 63
>gi|116008458 CDC14 homolog B isoform 3 [Homo sapiens]
Length = 461
Score = 55.5 bits (132), Expect = 2e-08
Identities = 42/145 (28%), Positives = 70/145 (48%), Gaps = 15/145 (10%)
Query: 33 FIEELKKYGVTTIVRVCEATYDTTLVEKEGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKF 92
+I+ K + VTTI+R+ + YD G D F DG+ P++ IV ++L +
Sbjct: 211 YIQYFKNHNVTTIIRLNKRMYDAKRFTDAGFDHHDLFFADGSTPTDAIVKEFLDIC---- 266
Query: 93 REEPGCCIAVHCVAGLGRAPVLVALALIEG-GMKYEDAVQFIRQKRRGAFNSKQL----- 146
E IAVHC AGLGR L+A +++ M + + ++R R G+ Q
Sbjct: 267 -ENAEGAIAVHCKAGLGRTGTLIACYIMKHYRMTAAETIAWVRICRPGSVIGPQQQFLVM 325
Query: 147 ----LYLEKYRPKMRLRFKDSNGHR 167
L+LE + +L+ +++ HR
Sbjct: 326 KQTNLWLEGDYFRQKLKGQENGQHR 350
>gi|4502699 CDC14 homolog B isoform 1 [Homo sapiens]
Length = 459
Score = 55.5 bits (132), Expect = 2e-08
Identities = 42/145 (28%), Positives = 70/145 (48%), Gaps = 15/145 (10%)
Query: 33 FIEELKKYGVTTIVRVCEATYDTTLVEKEGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKF 92
+I+ K + VTTI+R+ + YD G D F DG+ P++ IV ++L +
Sbjct: 248 YIQYFKNHNVTTIIRLNKRMYDAKRFTDAGFDHHDLFFADGSTPTDAIVKEFLDIC---- 303
Query: 93 REEPGCCIAVHCVAGLGRAPVLVALALIEG-GMKYEDAVQFIRQKRRGAFNSKQL----- 146
E IAVHC AGLGR L+A +++ M + + ++R R G+ Q
Sbjct: 304 -ENAEGAIAVHCKAGLGRTGTLIACYIMKHYRMTAAETIAWVRICRPGSVIGPQQQFLVM 362
Query: 147 ----LYLEKYRPKMRLRFKDSNGHR 167
L+LE + +L+ +++ HR
Sbjct: 363 KQTNLWLEGDYFRQKLKGQENGQHR 387
>gi|15451936 CDC14 homolog B isoform 2 [Homo sapiens]
Length = 498
Score = 55.5 bits (132), Expect = 2e-08
Identities = 42/145 (28%), Positives = 70/145 (48%), Gaps = 15/145 (10%)
Query: 33 FIEELKKYGVTTIVRVCEATYDTTLVEKEGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKF 92
+I+ K + VTTI+R+ + YD G D F DG+ P++ IV ++L +
Sbjct: 248 YIQYFKNHNVTTIIRLNKRMYDAKRFTDAGFDHHDLFFADGSTPTDAIVKEFLDIC---- 303
Query: 93 REEPGCCIAVHCVAGLGRAPVLVALALIEG-GMKYEDAVQFIRQKRRGAFNSKQL----- 146
E IAVHC AGLGR L+A +++ M + + ++R R G+ Q
Sbjct: 304 -ENAEGAIAVHCKAGLGRTGTLIACYIMKHYRMTAAETIAWVRICRPGSVIGPQQQFLVM 362
Query: 147 ----LYLEKYRPKMRLRFKDSNGHR 167
L+LE + +L+ +++ HR
Sbjct: 363 KQTNLWLEGDYFRQKLKGQENGQHR 387
>gi|15451933 CDC14 homolog A isoform 3 [Homo sapiens]
Length = 383
Score = 53.1 bits (126), Expect = 1e-07
Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 6/115 (5%)
Query: 38 KKYGVTTIVRVCEATYDTTLVEKEGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPG 97
KK+ VT +VR+ + Y+ G D F DG+ PS+ IV +L++ E
Sbjct: 217 KKHNVTAVVRLNKKIYEAKRFTDAGFEHYDLFFIDGSTPSDNIVRRFLNIC-----ENTE 271
Query: 98 CCIAVHCVAGLGRAPVLVALALIEG-GMKYEDAVQFIRQKRRGAFNSKQLLYLEK 151
IAVHC AGLGR L+A +++ + + + +IR R G+ Q +LE+
Sbjct: 272 GAIAVHCKAGLGRTGTLIACYVMKHYRFTHAEIIAWIRICRPGSIIGPQQHFLEE 326
>gi|15451929 CDC14 homolog A isoform 1 [Homo sapiens]
Length = 594
Score = 53.1 bits (126), Expect = 1e-07
Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 6/115 (5%)
Query: 38 KKYGVTTIVRVCEATYDTTLVEKEGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPG 97
KK+ VT +VR+ + Y+ G D F DG+ PS+ IV +L++ E
Sbjct: 217 KKHNVTAVVRLNKKIYEAKRFTDAGFEHYDLFFIDGSTPSDNIVRRFLNIC-----ENTE 271
Query: 98 CCIAVHCVAGLGRAPVLVALALIEG-GMKYEDAVQFIRQKRRGAFNSKQLLYLEK 151
IAVHC AGLGR L+A +++ + + + +IR R G+ Q +LE+
Sbjct: 272 GAIAVHCKAGLGRTGTLIACYVMKHYRFTHAEIIAWIRICRPGSIIGPQQHFLEE 326
>gi|15451931 CDC14 homolog A isoform 2 [Homo sapiens]
Length = 623
Score = 53.1 bits (126), Expect = 1e-07
Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 6/115 (5%)
Query: 38 KKYGVTTIVRVCEATYDTTLVEKEGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPG 97
KK+ VT +VR+ + Y+ G D F DG+ PS+ IV +L++ E
Sbjct: 217 KKHNVTAVVRLNKKIYEAKRFTDAGFEHYDLFFIDGSTPSDNIVRRFLNIC-----ENTE 271
Query: 98 CCIAVHCVAGLGRAPVLVALALIEG-GMKYEDAVQFIRQKRRGAFNSKQLLYLEK 151
IAVHC AGLGR L+A +++ + + + +IR R G+ Q +LE+
Sbjct: 272 GAIAVHCKAGLGRTGTLIACYVMKHYRFTHAEIIAWIRICRPGSIIGPQQHFLEE 326
>gi|73765544 phosphatase and tensin homolog [Homo sapiens]
Length = 403
Score = 43.9 bits (102), Expect = 7e-05
Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 20/103 (19%)
Query: 45 IVRVC-EATYDTTLVEKEGIHVLDWPFDDGAPPSNQIV-------DDWLSLVKIKFREEP 96
I +C E YDT K V +PF+D PP +++ D WLS E+
Sbjct: 67 IYNLCAERHYDTA---KFNCRVAQYPFEDHNPPQLELIKPFCEDLDQWLS-------EDD 116
Query: 97 GCCIAVHCVAGLGRAPVLVALALIEGG--MKYEDAVQFIRQKR 137
A+HC AG GR V++ L+ G +K ++A+ F + R
Sbjct: 117 NHVAAIHCKAGKGRTGVMICAYLLHRGKFLKAQEALDFYGEVR 159
>gi|30089952 protein tyrosine phosphatase domain containing 1
protein isoform 1 [Homo sapiens]
Length = 806
Score = 41.2 bits (95), Expect = 5e-04
Identities = 36/148 (24%), Positives = 68/148 (45%), Gaps = 23/148 (15%)
Query: 25 PTNATLNKF--IEELKKYGVTTIVRVCEA----------------TYDTTLVEKEGIHVL 66
P++ L K+ I++ +G+ TI+ + TY + GI+
Sbjct: 148 PSSELLEKYHIIDQFLSHGIKTIINLQRPGEHASCGNPLEQESGFTYLPEAFMEAGIYFY 207
Query: 67 DWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALI-EGGMK 125
++ + D S + D + ++ +E +A+HC AGLGR VL+A L+ M
Sbjct: 208 NFGWKDYGVASLTTILDMVKVMTFALQEGK---VAIHCHAGLGRTGVLIACYLVFATRMT 264
Query: 126 YEDAVQFIRQKRRGAFNSK-QLLYLEKY 152
+ A+ F+R KR + ++ QLL + ++
Sbjct: 265 ADQAIIFVRAKRPNSIQTRGQLLCVREF 292
>gi|30089950 protein tyrosine phosphatase domain containing 1
protein isoform 2 [Homo sapiens]
Length = 754
Score = 41.2 bits (95), Expect = 5e-04
Identities = 36/148 (24%), Positives = 68/148 (45%), Gaps = 23/148 (15%)
Query: 25 PTNATLNKF--IEELKKYGVTTIVRVCEA----------------TYDTTLVEKEGIHVL 66
P++ L K+ I++ +G+ TI+ + TY + GI+
Sbjct: 96 PSSELLEKYHIIDQFLSHGIKTIINLQRPGEHASCGNPLEQESGFTYLPEAFMEAGIYFY 155
Query: 67 DWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALI-EGGMK 125
++ + D S + D + ++ +E +A+HC AGLGR VL+A L+ M
Sbjct: 156 NFGWKDYGVASLTTILDMVKVMTFALQEGK---VAIHCHAGLGRTGVLIACYLVFATRMT 212
Query: 126 YEDAVQFIRQKRRGAFNSK-QLLYLEKY 152
+ A+ F+R KR + ++ QLL + ++
Sbjct: 213 ADQAIIFVRAKRPNSIQTRGQLLCVREF 240
>gi|104487611 protein tyrosine phosphatase, receptor type, sigma
isoform 4 precursor [Homo sapiens]
Length = 1505
Score = 40.8 bits (94), Expect = 6e-04
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 67 DWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCC--IAVHCVAGLGRAPVLVALALIEGGM 124
DWP + G P S + D++ V K +E+ G I+VHC AG+GR V + L+++ M
Sbjct: 1400 DWP-EQGVPKSGEGFIDFIGQVH-KTKEQFGQDGPISVHCSAGVGRTGVFITLSIVLERM 1457
Query: 125 KYEDAVQFIR 134
+YE V +
Sbjct: 1458 RYEGVVDIFQ 1467
>gi|104487297 protein tyrosine phosphatase, receptor type, sigma
isoform 2 precursor [Homo sapiens]
Length = 1910
Score = 40.8 bits (94), Expect = 6e-04
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 67 DWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCC--IAVHCVAGLGRAPVLVALALIEGGM 124
DWP + G P S + D++ V K +E+ G I+VHC AG+GR V + L+++ M
Sbjct: 1805 DWP-EQGVPKSGEGFIDFIGQVH-KTKEQFGQDGPISVHCSAGVGRTGVFITLSIVLERM 1862
Query: 125 KYEDAVQFIR 134
+YE V +
Sbjct: 1863 RYEGVVDIFQ 1872
>gi|104487295 protein tyrosine phosphatase, receptor type, sigma
isoform 3 precursor [Homo sapiens]
Length = 1501
Score = 40.8 bits (94), Expect = 6e-04
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 67 DWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCC--IAVHCVAGLGRAPVLVALALIEGGM 124
DWP + G P S + D++ V K +E+ G I+VHC AG+GR V + L+++ M
Sbjct: 1396 DWP-EQGVPKSGEGFIDFIGQVH-KTKEQFGQDGPISVHCSAGVGRTGVFITLSIVLERM 1453
Query: 125 KYEDAVQFIR 134
+YE V +
Sbjct: 1454 RYEGVVDIFQ 1463
>gi|104487006 protein tyrosine phosphatase, receptor type, sigma
isoform 1 precursor [Homo sapiens]
Length = 1948
Score = 40.8 bits (94), Expect = 6e-04
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 67 DWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCC--IAVHCVAGLGRAPVLVALALIEGGM 124
DWP + G P S + D++ V K +E+ G I+VHC AG+GR V + L+++ M
Sbjct: 1843 DWP-EQGVPKSGEGFIDFIGQVH-KTKEQFGQDGPISVHCSAGVGRTGVFITLSIVLERM 1900
Query: 125 KYEDAVQFIR 134
+YE V +
Sbjct: 1901 RYEGVVDIFQ 1910
>gi|104487002 protein tyrosine phosphatase, receptor type, D isoform 5
precursor [Homo sapiens]
Length = 1502
Score = 40.8 bits (94), Expect = 6e-04
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 67 DWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCC--IAVHCVAGLGRAPVLVALALIEGGM 124
DWP + G P S + D++ V K +E+ G I+VHC AG+GR V + L+++ M
Sbjct: 1397 DWP-EQGVPKSGEGFIDFIGQVH-KTKEQFGQDGPISVHCSAGVGRTGVFITLSIVLERM 1454
Query: 125 KYEDAVQFIR 134
+YE V +
Sbjct: 1455 RYEGVVDIFQ 1464
Score = 27.3 bits (59), Expect = 6.7
Identities = 32/112 (28%), Positives = 43/112 (38%), Gaps = 11/112 (9%)
Query: 22 THNPTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEKEGIHVLD---WPFDDGAPPSN 78
TH TL +E L Y V T A Y EK + WP D G P
Sbjct: 1066 THGLVQVTLLDTVE-LATYCVRTF-----ALYKNGSSEKREVRQFQFTAWP-DHGVPEHP 1118
Query: 79 QIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALIEGGMKYEDAV 130
+L VK + G + VHC AG+GR + + + +K+E V
Sbjct: 1119 TPFLAFLRRVKTCNPPDAGPMV-VHCSAGVGRTGCFIVIDAMLERIKHEKTV 1169
>gi|4506309 protein tyrosine phosphatase, receptor type, D isoform 1
precursor [Homo sapiens]
Length = 1912
Score = 40.8 bits (94), Expect = 6e-04
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 67 DWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCC--IAVHCVAGLGRAPVLVALALIEGGM 124
DWP + G P S + D++ V K +E+ G I+VHC AG+GR V + L+++ M
Sbjct: 1807 DWP-EQGVPKSGEGFIDFIGQVH-KTKEQFGQDGPISVHCSAGVGRTGVFITLSIVLERM 1864
Query: 125 KYEDAVQFIR 134
+YE V +
Sbjct: 1865 RYEGVVDIFQ 1874
Score = 27.3 bits (59), Expect = 6.7
Identities = 32/112 (28%), Positives = 43/112 (38%), Gaps = 11/112 (9%)
Query: 22 THNPTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEKEGIHVLD---WPFDDGAPPSN 78
TH TL +E L Y V T A Y EK + WP D G P
Sbjct: 1476 THGLVQVTLLDTVE-LATYCVRTF-----ALYKNGSSEKREVRQFQFTAWP-DHGVPEHP 1528
Query: 79 QIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALIEGGMKYEDAV 130
+L VK + G + VHC AG+GR + + + +K+E V
Sbjct: 1529 TPFLAFLRRVKTCNPPDAGPMV-VHCSAGVGRTGCFIVIDAMLERIKHEKTV 1579
>gi|18860890 protein tyrosine phosphatase, receptor type, D isoform 2
precursor [Homo sapiens]
Length = 1899
Score = 40.8 bits (94), Expect = 6e-04
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 67 DWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCC--IAVHCVAGLGRAPVLVALALIEGGM 124
DWP + G P S + D++ V K +E+ G I+VHC AG+GR V + L+++ M
Sbjct: 1794 DWP-EQGVPKSGEGFIDFIGQVH-KTKEQFGQDGPISVHCSAGVGRTGVFITLSIVLERM 1851
Query: 125 KYEDAVQFIR 134
+YE V +
Sbjct: 1852 RYEGVVDIFQ 1861
Score = 27.3 bits (59), Expect = 6.7
Identities = 32/112 (28%), Positives = 43/112 (38%), Gaps = 11/112 (9%)
Query: 22 THNPTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEKEGIHVLD---WPFDDGAPPSN 78
TH TL +E L Y V T A Y EK + WP D G P
Sbjct: 1463 THGLVQVTLLDTVE-LATYCVRTF-----ALYKNGSSEKREVRQFQFTAWP-DHGVPEHP 1515
Query: 79 QIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALIEGGMKYEDAV 130
+L VK + G + VHC AG+GR + + + +K+E V
Sbjct: 1516 TPFLAFLRRVKTCNPPDAGPMV-VHCSAGVGRTGCFIVIDAMLERIKHEKTV 1566
>gi|18860892 protein tyrosine phosphatase, receptor type, D isoform 3
precursor [Homo sapiens]
Length = 1903
Score = 40.8 bits (94), Expect = 6e-04
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 67 DWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCC--IAVHCVAGLGRAPVLVALALIEGGM 124
DWP + G P S + D++ V K +E+ G I+VHC AG+GR V + L+++ M
Sbjct: 1798 DWP-EQGVPKSGEGFIDFIGQVH-KTKEQFGQDGPISVHCSAGVGRTGVFITLSIVLERM 1855
Query: 125 KYEDAVQFIR 134
+YE V +
Sbjct: 1856 RYEGVVDIFQ 1865
Score = 27.3 bits (59), Expect = 6.7
Identities = 32/112 (28%), Positives = 43/112 (38%), Gaps = 11/112 (9%)
Query: 22 THNPTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEKEGIHVLD---WPFDDGAPPSN 78
TH TL +E L Y V T A Y EK + WP D G P
Sbjct: 1467 THGLVQVTLLDTVE-LATYCVRTF-----ALYKNGSSEKREVRQFQFTAWP-DHGVPEHP 1519
Query: 79 QIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALIEGGMKYEDAV 130
+L VK + G + VHC AG+GR + + + +K+E V
Sbjct: 1520 TPFLAFLRRVKTCNPPDAGPMV-VHCSAGVGRTGCFIVIDAMLERIKHEKTV 1570
>gi|18860894 protein tyrosine phosphatase, receptor type, D isoform 4
precursor [Homo sapiens]
Length = 1501
Score = 40.8 bits (94), Expect = 6e-04
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 67 DWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCC--IAVHCVAGLGRAPVLVALALIEGGM 124
DWP + G P S + D++ V K +E+ G I+VHC AG+GR V + L+++ M
Sbjct: 1396 DWP-EQGVPKSGEGFIDFIGQVH-KTKEQFGQDGPISVHCSAGVGRTGVFITLSIVLERM 1453
Query: 125 KYEDAVQFIR 134
+YE V +
Sbjct: 1454 RYEGVVDIFQ 1463
Score = 27.3 bits (59), Expect = 6.7
Identities = 32/112 (28%), Positives = 43/112 (38%), Gaps = 11/112 (9%)
Query: 22 THNPTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEKEGIHVLD---WPFDDGAPPSN 78
TH TL +E L Y V T A Y EK + WP D G P
Sbjct: 1065 THGLVQVTLLDTVE-LATYCVRTF-----ALYKNGSSEKREVRQFQFTAWP-DHGVPEHP 1117
Query: 79 QIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALIEGGMKYEDAV 130
+L VK + G + VHC AG+GR + + + +K+E V
Sbjct: 1118 TPFLAFLRRVKTCNPPDAGPMV-VHCSAGVGRTGCFIVIDAMLERIKHEKTV 1168
>gi|196114970 protein tyrosine phosphatase, non-receptor type 12
isoform 3 [Homo sapiens]
Length = 650
Score = 39.3 bits (90), Expect = 0.002
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 11/91 (12%)
Query: 64 HVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVAL----AL 119
H ++WP D P S + D +SL++ K++E I +HC AG GR + A+ L
Sbjct: 63 HYVNWP-DHDVPSSFDSILDMISLMR-KYQEHEDVPICIHCSAGCGRTGAICAIDYTWNL 120
Query: 120 IEGGMKYED-----AVQFIRQKRRGAFNSKQ 145
++ G E+ +Q +R +R A +K+
Sbjct: 121 LKAGKIPEEFNVFNLIQEMRTQRHSAVQTKE 151
>gi|196114967 protein tyrosine phosphatase, non-receptor type 12
isoform 2 [Homo sapiens]
Length = 661
Score = 39.3 bits (90), Expect = 0.002
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 11/91 (12%)
Query: 64 HVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVAL----AL 119
H ++WP D P S + D +SL++ K++E I +HC AG GR + A+ L
Sbjct: 74 HYVNWP-DHDVPSSFDSILDMISLMR-KYQEHEDVPICIHCSAGCGRTGAICAIDYTWNL 131
Query: 120 IEGGMKYED-----AVQFIRQKRRGAFNSKQ 145
++ G E+ +Q +R +R A +K+
Sbjct: 132 LKAGKIPEEFNVFNLIQEMRTQRHSAVQTKE 162
>gi|196114951 protein tyrosine phosphatase, non-receptor type 12
isoform 1 [Homo sapiens]
Length = 780
Score = 39.3 bits (90), Expect = 0.002
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 11/91 (12%)
Query: 64 HVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVAL----AL 119
H ++WP D P S + D +SL++ K++E I +HC AG GR + A+ L
Sbjct: 193 HYVNWP-DHDVPSSFDSILDMISLMR-KYQEHEDVPICIHCSAGCGRTGAICAIDYTWNL 250
Query: 120 IEGGMKYED-----AVQFIRQKRRGAFNSKQ 145
++ G E+ +Q +R +R A +K+
Sbjct: 251 LKAGKIPEEFNVFNLIQEMRTQRHSAVQTKE 281
>gi|109633041 protein tyrosine phosphatase, receptor type, F isoform 1
precursor [Homo sapiens]
Length = 1907
Score = 39.3 bits (90), Expect = 0.002
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 67 DWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCC--IAVHCVAGLGRAPVLVALALIEGGM 124
DWP + G P + + D++ V K +E+ G I VHC AG+GR V + L+++ M
Sbjct: 1802 DWP-EQGVPKTGEGFIDFIGQVH-KTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERM 1859
Query: 125 KYEDAVQFIR 134
+YE V +
Sbjct: 1860 RYEGVVDMFQ 1869
Score = 27.3 bits (59), Expect = 6.7
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 68 WPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALIEGGMKYE 127
WP D G P + +L VK + G + VHC AG+GR + + + MK+E
Sbjct: 1514 WP-DHGVPEYPTPILAFLRRVKACNPLDAGPMV-VHCSAGVGRTGCFIVIDAMLERMKHE 1571
Query: 128 DAV 130
V
Sbjct: 1572 KTV 1574
>gi|109633039 protein tyrosine phosphatase, receptor type, F isoform 2
precursor [Homo sapiens]
Length = 1898
Score = 39.3 bits (90), Expect = 0.002
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 67 DWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCC--IAVHCVAGLGRAPVLVALALIEGGM 124
DWP + G P + + D++ V K +E+ G I VHC AG+GR V + L+++ M
Sbjct: 1793 DWP-EQGVPKTGEGFIDFIGQVH-KTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERM 1850
Query: 125 KYEDAVQFIR 134
+YE V +
Sbjct: 1851 RYEGVVDMFQ 1860
Score = 27.3 bits (59), Expect = 6.7
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 68 WPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALIEGGMKYE 127
WP D G P + +L VK + G + VHC AG+GR + + + MK+E
Sbjct: 1505 WP-DHGVPEYPTPILAFLRRVKACNPLDAGPMV-VHCSAGVGRTGCFIVIDAMLERMKHE 1562
Query: 128 DAV 130
V
Sbjct: 1563 KTV 1565
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.139 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,700,040
Number of Sequences: 37866
Number of extensions: 271611
Number of successful extensions: 764
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 95
Number of HSP's that attempted gapping in prelim test: 697
Number of HSP's gapped (non-prelim): 158
length of query: 173
length of database: 18,247,518
effective HSP length: 95
effective length of query: 78
effective length of database: 14,650,248
effective search space: 1142719344
effective search space used: 1142719344
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.