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Search of human proteins with 4505463
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4505463 contactin associated protein 1 precursor [Homo
sapiens]
(1384 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4505463 contactin associated protein 1 precursor [Homo sapiens] 2930 0.0
gi|7662350 cell recognition molecule Caspr2 precursor [Homo sapi... 1145 0.0
gi|18640734 contactin associated protein-like 5 [Homo sapiens] 938 0.0
gi|116284404 cell recognition protein CASPR4 isoform 1 [Homo sap... 931 0.0
gi|239743754 PREDICTED: hypothetical protein LOC389722 isoform 1... 884 0.0
gi|148664242 cell recognition protein CASPR4 isoform 2 [Homo sap... 882 0.0
gi|47519929 cell recognition molecule CASPR3 [Homo sapiens] 879 0.0
gi|239743756 PREDICTED: hypothetical protein LOC389722 isoform 2... 708 0.0
gi|239743797 PREDICTED: similar to cell recognition molecule CAS... 344 4e-94
gi|239743729 PREDICTED: similar to contactin associated protein-... 246 1e-64
gi|14149613 neurexin 1 isoform alpha1 precursor [Homo sapiens] 134 8e-31
gi|21166380 neurexin 2 isoform alpha-2 precursor [Homo sapiens] 133 1e-30
gi|208609951 neurexin 1 isoform alpha2 precursor [Homo sapiens] 131 5e-30
gi|14211536 neurexin 2 isoform alpha-1 precursor [Homo sapiens] 130 7e-30
gi|21070969 neurexin 3 isoform 1 precursor [Homo sapiens] 115 3e-25
gi|169184330 PREDICTED: novel protein similar to contactin assoc... 103 1e-21
gi|13325064 cadherin EGF LAG seven-pass G-type receptor 2 [Homo ... 74 7e-13
gi|7656967 cadherin EGF LAG seven-pass G-type receptor 1 [Homo s... 72 4e-12
gi|38788416 laminin, alpha 1 precursor [Homo sapiens] 70 1e-11
gi|10518506 coagulation factor VIII isoform b precursor [Homo sa... 70 1e-11
gi|4503647 coagulation factor VIII isoform a precursor [Homo sap... 70 1e-11
gi|105990535 coagulation factor V precursor [Homo sapiens] 69 4e-11
gi|10835083 X-linked juvenile retinoschisis protein precursor [H... 69 4e-11
gi|223005864 carboxypeptidase X (M14 family), member 2 [Homo sap... 68 5e-11
gi|126012571 heparan sulfate proteoglycan 2 [Homo sapiens] 68 7e-11
gi|239758135 PREDICTED: similar to cell recognition molecule CAS... 67 1e-10
gi|41872572 neuropilin 2 isoform 3 precursor [Homo sapiens] 66 3e-10
gi|41872567 neuropilin 2 isoform 5 precursor [Homo sapiens] 66 3e-10
gi|41872562 neuropilin 2 isoform 1 precursor [Homo sapiens] 66 3e-10
gi|41872557 neuropilin 2 isoform 6 precursor [Homo sapiens] 66 3e-10
>gi|4505463 contactin associated protein 1 precursor [Homo sapiens]
Length = 1384
Score = 2930 bits (7597), Expect = 0.0
Identities = 1384/1384 (100%), Positives = 1384/1384 (100%)
Query: 1 MMHLRLFCILLAAVSGAEGWGYYGCDEELVGPLYARSLGASSYYSLLTAPRFARLHGISG 60
MMHLRLFCILLAAVSGAEGWGYYGCDEELVGPLYARSLGASSYYSLLTAPRFARLHGISG
Sbjct: 1 MMHLRLFCILLAAVSGAEGWGYYGCDEELVGPLYARSLGASSYYSLLTAPRFARLHGISG 60
Query: 61 WSPRIGDPNPWLQIDLMKKHRIRAVATQGSFNSWDWVTRYMLLYGDRVDSWTPFYQRGHN 120
WSPRIGDPNPWLQIDLMKKHRIRAVATQGSFNSWDWVTRYMLLYGDRVDSWTPFYQRGHN
Sbjct: 61 WSPRIGDPNPWLQIDLMKKHRIRAVATQGSFNSWDWVTRYMLLYGDRVDSWTPFYQRGHN 120
Query: 121 STFFGNVNESAVVRHDLHFHFTARYIRIVPLAWNPRGKIGLRLGLYGCPYKADILYFDGD 180
STFFGNVNESAVVRHDLHFHFTARYIRIVPLAWNPRGKIGLRLGLYGCPYKADILYFDGD
Sbjct: 121 STFFGNVNESAVVRHDLHFHFTARYIRIVPLAWNPRGKIGLRLGLYGCPYKADILYFDGD 180
Query: 181 DAISYRFPRGVSRSLWDVFAFSFKTEEKDGLLLHAEGAQGDYVTLELEGAHLLLHMSLGS 240
DAISYRFPRGVSRSLWDVFAFSFKTEEKDGLLLHAEGAQGDYVTLELEGAHLLLHMSLGS
Sbjct: 181 DAISYRFPRGVSRSLWDVFAFSFKTEEKDGLLLHAEGAQGDYVTLELEGAHLLLHMSLGS 240
Query: 241 SPIQPRPGHTTVSAGGVLNDQHWHYVRVDRFGRDVNFTLDGYVQRFILNGDFERLNLDTE 300
SPIQPRPGHTTVSAGGVLNDQHWHYVRVDRFGRDVNFTLDGYVQRFILNGDFERLNLDTE
Sbjct: 241 SPIQPRPGHTTVSAGGVLNDQHWHYVRVDRFGRDVNFTLDGYVQRFILNGDFERLNLDTE 300
Query: 301 MFIGGLVGAARKNLAYRHNFRGCIENVIFNRVNIADLAVRRHSRITFEGKVAFRCLDPVP 360
MFIGGLVGAARKNLAYRHNFRGCIENVIFNRVNIADLAVRRHSRITFEGKVAFRCLDPVP
Sbjct: 301 MFIGGLVGAARKNLAYRHNFRGCIENVIFNRVNIADLAVRRHSRITFEGKVAFRCLDPVP 360
Query: 361 HPINFGGPHNFVQVPGFPRRGRLAVSFRFRTWDLTGLLLFSRLGDGLGHVELTLSEGQVN 420
HPINFGGPHNFVQVPGFPRRGRLAVSFRFRTWDLTGLLLFSRLGDGLGHVELTLSEGQVN
Sbjct: 361 HPINFGGPHNFVQVPGFPRRGRLAVSFRFRTWDLTGLLLFSRLGDGLGHVELTLSEGQVN 420
Query: 421 VSIAQSGRKKLQFAAGYRLNDGFWHEVNFVAQENHAVISIDDVEGAEVRVSYPLLIRTGT 480
VSIAQSGRKKLQFAAGYRLNDGFWHEVNFVAQENHAVISIDDVEGAEVRVSYPLLIRTGT
Sbjct: 421 VSIAQSGRKKLQFAAGYRLNDGFWHEVNFVAQENHAVISIDDVEGAEVRVSYPLLIRTGT 480
Query: 481 SYFFGGCPKPASRWDCHSNQTAFHGCMELLKVDGQLVNLTLVEGRRLGFYAEVLFDTCGI 540
SYFFGGCPKPASRWDCHSNQTAFHGCMELLKVDGQLVNLTLVEGRRLGFYAEVLFDTCGI
Sbjct: 481 SYFFGGCPKPASRWDCHSNQTAFHGCMELLKVDGQLVNLTLVEGRRLGFYAEVLFDTCGI 540
Query: 541 TDRCSPNMCEHDGRCYQSWDDFICYCELTGYKGETCHTPLYKESCEAYRLSGKTSGNFTI 600
TDRCSPNMCEHDGRCYQSWDDFICYCELTGYKGETCHTPLYKESCEAYRLSGKTSGNFTI
Sbjct: 541 TDRCSPNMCEHDGRCYQSWDDFICYCELTGYKGETCHTPLYKESCEAYRLSGKTSGNFTI 600
Query: 601 DPDGSGPLKPFVVYCDIRENRAWTVVRHDRLWTTRVTGSSMERPFLGAIQYWNASWEEVS 660
DPDGSGPLKPFVVYCDIRENRAWTVVRHDRLWTTRVTGSSMERPFLGAIQYWNASWEEVS
Sbjct: 601 DPDGSGPLKPFVVYCDIRENRAWTVVRHDRLWTTRVTGSSMERPFLGAIQYWNASWEEVS 660
Query: 661 ALANASQHCEQWIEFSCYNSRLLNTAGGYPYSFWIGRNEEQHFYWGGSQPGIQRCACGLD 720
ALANASQHCEQWIEFSCYNSRLLNTAGGYPYSFWIGRNEEQHFYWGGSQPGIQRCACGLD
Sbjct: 661 ALANASQHCEQWIEFSCYNSRLLNTAGGYPYSFWIGRNEEQHFYWGGSQPGIQRCACGLD 720
Query: 721 RSCVDPALYCNCDADQPQWRTDKGLLTFVDHLPVTQVVIGDTNRSTSEAQFFLRPLRCYG 780
RSCVDPALYCNCDADQPQWRTDKGLLTFVDHLPVTQVVIGDTNRSTSEAQFFLRPLRCYG
Sbjct: 721 RSCVDPALYCNCDADQPQWRTDKGLLTFVDHLPVTQVVIGDTNRSTSEAQFFLRPLRCYG 780
Query: 781 DRNSWNTISFHTGAALRFPPIRANHSLDVSFYFRTSAPSGVFLENMGGPYCQWRRPYVRV 840
DRNSWNTISFHTGAALRFPPIRANHSLDVSFYFRTSAPSGVFLENMGGPYCQWRRPYVRV
Sbjct: 781 DRNSWNTISFHTGAALRFPPIRANHSLDVSFYFRTSAPSGVFLENMGGPYCQWRRPYVRV 840
Query: 841 ELNTSRDVVFAFDVGNGDENLTVHSDDFEFNDDEWHLVRAEINVKQARLRVDHRPWVLRP 900
ELNTSRDVVFAFDVGNGDENLTVHSDDFEFNDDEWHLVRAEINVKQARLRVDHRPWVLRP
Sbjct: 841 ELNTSRDVVFAFDVGNGDENLTVHSDDFEFNDDEWHLVRAEINVKQARLRVDHRPWVLRP 900
Query: 901 MPLQTYIWMEYDQPLYVGSAELKRRPFVGCLRAMRLNGVTLNLEGRANASEGTSPNCTGH 960
MPLQTYIWMEYDQPLYVGSAELKRRPFVGCLRAMRLNGVTLNLEGRANASEGTSPNCTGH
Sbjct: 901 MPLQTYIWMEYDQPLYVGSAELKRRPFVGCLRAMRLNGVTLNLEGRANASEGTSPNCTGH 960
Query: 961 CAHPRLPCFHGGRCVERYSYYTCDCDLTAFDGPYCNHDIGGFFEPGTWMRYNLQSALRSA 1020
CAHPRLPCFHGGRCVERYSYYTCDCDLTAFDGPYCNHDIGGFFEPGTWMRYNLQSALRSA
Sbjct: 961 CAHPRLPCFHGGRCVERYSYYTCDCDLTAFDGPYCNHDIGGFFEPGTWMRYNLQSALRSA 1020
Query: 1021 AREFSHMLSRPVPGYEPGYIPGYDTPGYVPGYHGPGYRLPDYPRPGRPVPGYRGPVYNVT 1080
AREFSHMLSRPVPGYEPGYIPGYDTPGYVPGYHGPGYRLPDYPRPGRPVPGYRGPVYNVT
Sbjct: 1021 AREFSHMLSRPVPGYEPGYIPGYDTPGYVPGYHGPGYRLPDYPRPGRPVPGYRGPVYNVT 1080
Query: 1081 GEEVSFSFSTSSAPAVLLYVSSFVRDYMAVLIKDDGTLQLRYQLGTSPYVYQLTTRPVTD 1140
GEEVSFSFSTSSAPAVLLYVSSFVRDYMAVLIKDDGTLQLRYQLGTSPYVYQLTTRPVTD
Sbjct: 1081 GEEVSFSFSTSSAPAVLLYVSSFVRDYMAVLIKDDGTLQLRYQLGTSPYVYQLTTRPVTD 1140
Query: 1141 GQPHSINITRVYRNLFIQVDYFPLTEQKFSLLVDSQLDSPKALYLGRVMETGVIDPEIQR 1200
GQPHSINITRVYRNLFIQVDYFPLTEQKFSLLVDSQLDSPKALYLGRVMETGVIDPEIQR
Sbjct: 1141 GQPHSINITRVYRNLFIQVDYFPLTEQKFSLLVDSQLDSPKALYLGRVMETGVIDPEIQR 1200
Query: 1201 YNTPGFSGCLSGVRFNNVAPLKTHFRTPRPMTAELAEALRVQGELSESNCGAMPRLVSEV 1260
YNTPGFSGCLSGVRFNNVAPLKTHFRTPRPMTAELAEALRVQGELSESNCGAMPRLVSEV
Sbjct: 1201 YNTPGFSGCLSGVRFNNVAPLKTHFRTPRPMTAELAEALRVQGELSESNCGAMPRLVSEV 1260
Query: 1261 PPELDPWYLPPDFPYYHDEGWVAILLGFLVAFLLLGLVGMLVLFYLQNHRYKGSYHTNEP 1320
PPELDPWYLPPDFPYYHDEGWVAILLGFLVAFLLLGLVGMLVLFYLQNHRYKGSYHTNEP
Sbjct: 1261 PPELDPWYLPPDFPYYHDEGWVAILLGFLVAFLLLGLVGMLVLFYLQNHRYKGSYHTNEP 1320
Query: 1321 KAAHEYHPGSKPPLPTSGPAQVPTPTAAPNQAPASAPAPAPTPAPAPGPRDQNLPQILEE 1380
KAAHEYHPGSKPPLPTSGPAQVPTPTAAPNQAPASAPAPAPTPAPAPGPRDQNLPQILEE
Sbjct: 1321 KAAHEYHPGSKPPLPTSGPAQVPTPTAAPNQAPASAPAPAPTPAPAPGPRDQNLPQILEE 1380
Query: 1381 SRSE 1384
SRSE
Sbjct: 1381 SRSE 1384
>gi|7662350 cell recognition molecule Caspr2 precursor [Homo sapiens]
Length = 1331
Score = 1145 bits (2961), Expect = 0.0
Identities = 577/1321 (43%), Positives = 824/1321 (62%), Gaps = 76/1321 (5%)
Query: 25 CDEELVGPLYARSLGASSYYSLLTAPRFARLH---GISGWSPRIGDPNPWLQIDLMKKHR 81
CDE LV L + +SS S +P +A+++ G GWSP D WLQ+D + +
Sbjct: 35 CDEPLVSGLPHVAFSSSSSISGSYSPGYAKINKRGGAGGWSPSDSDHYQWLQVDFGNRKQ 94
Query: 82 IRAVATQGSFNSWDWVTRYMLLYGDRVDSWTPFYQRGHNSTFFGNVNESAVVRHDLHFHF 141
I A+ATQG ++S DWVT+Y +LY D +W P++Q G+ F GN+N VVRH+L
Sbjct: 95 ISAIATQGRYSSSDWVTQYRMLYSDTGRNWKPYHQDGNIWAFPGNINSDGVVRHELQHPI 154
Query: 142 TARYIRIVPLAWNPRGKIGLRLGLYGCPYKADILYFDGDDAISYRFPRGVSRSLWDVFAF 201
ARY+RIVPL WN G+IGLR+ +YGC Y AD++ FDG + YRF ++L DV A
Sbjct: 155 IARYVRIVPLDWNGEGRIGLRIEVYGCSYWADVINFDGHVVLPYRFRNKKMKTLKDVIAL 214
Query: 202 SFKTEEKDGLLLHAEGAQGDYVTLELEGAHLLLHMSLGSSPIQPRPGHTTVSAGGVLNDQ 261
+FKT E +G++LH EG QGDY+TLEL+ A L+L ++LGS+ + P GHT+V G +L+D
Sbjct: 215 NFKTSESEGVILHGEGQQGDYITLELKKAKLVLSLNLGSNQLGPIYGHTSVMTGSLLDDH 274
Query: 262 HWHYVRVDRFGRDVNFTLDGYVQRFILNGDFERLNLDTEMFIGGLVGAARKNLAYRHNFR 321
HWH V ++R GR +N TLD +Q F NG+F+ L+LD E+ GG+ + + + + R NF+
Sbjct: 275 HWHSVVIERQGRSINLTLDRSMQHFRTNGEFDYLDLDYEITFGGIPFSGKPSSSSRKNFK 334
Query: 322 GCIENVIFNRVNIADLAVRRHSRITFEGKVAFRCLDPVPHPINFGGPHNFVQVPGFPRRG 381
GC+E++ +N VNI DLA R+ + G ++F C++P P+ F ++++VPG +
Sbjct: 335 GCMESINYNGVNITDLARRKKLEPSNVGNLSFSCVEPYTVPVFFNAT-SYLEVPGRLNQD 393
Query: 382 RLAVSFRFRTWDLTGLLLFSRLGDGLGHVELTLSEGQ--VNVSIAQSGRKKLQFAAGYRL 439
+VSF+FRTW+ GLL+FS D LG+VE+ L+E + V+++I Q+ ++ ++G L
Sbjct: 394 LFSVSFQFRTWNPNGLLVFSHFADNLGNVEIDLTESKVGVHINITQTKMSQIDISSGSGL 453
Query: 440 NDGFWHEVNFVAQENHAVISIDDVEGAEVRVSYPLLIRTGTSYFFGGCPKPASRWDCHSN 499
NDG WHEV F+A+EN A+++ID E + VR + PL ++TG YFFGG +
Sbjct: 454 NDGQWHEVRFLAKENFAILTIDGDEASAVRTNSPLQVKTGEKYFFGGFLNQMNNSSHSVL 513
Query: 500 QTAFHGCMELLKVDGQLVNLTLVEGRRLGFYAEVLFDTCGITDRCSPNMCEHDGRCYQSW 559
Q +F GCM+L++VD QLVNL V R+ G +A V D C I DRC PN CEH G+C Q+W
Sbjct: 514 QPSFQGCMQLIQVDDQLVNLYEVAQRKPGSFANVSIDMCAIIDRCVPNHCEHGGKCSQTW 573
Query: 560 DDFICYCELTGYKGETCHTPLYKESCEAYRLSGKTSGNFTIDPDGSGPLKPFVVYCDIRE 619
D F C C+ TGY G TCH +Y+ SCEAY+ G+TS + IDPDGSGPL P VYC++ E
Sbjct: 574 DSFKCTCDETGYSGATCHNSIYEPSCEAYKHLGQTSNYYWIDPDGSGPLGPLKVYCNMTE 633
Query: 620 NRAWTVVRHDRLWTTRVTGSSMERPFLGAIQYWNASWEEVSALANASQHCEQWIEFSCYN 679
++ WT+V HD T V G + E+ + + Y +AS +++SA+ +++++CEQ++ + C
Sbjct: 634 DKVWTIVSHDLQMQTPVVGYNPEKYSVTQLVY-SASMDQISAITDSAEYCEQYVSYFCKM 692
Query: 680 SRLLNTAGGYPYSFWIGRNEEQHFYWGGSQPGIQRCACGLDRSCVDPALYCNCDADQPQW 739
SRLLNT G PY++W+G+ E+H+YWGGS PGIQ+CACG++R+C DP YCNCDAD QW
Sbjct: 693 SRLLNTPDGSPYTWWVGKANEKHYYWGGSGPGIQKCACGIERNCTDPKYYCNCDADYKQW 752
Query: 740 RTDKGLLTFVDHLPVTQVVIGDTNRSTSEAQFFLRPLRCYGDRNSWNTISF-HTGAALRF 798
R D G L++ DHLPV+QVV+GDT+R SEA+ + PLRC GDRN WN SF + + L F
Sbjct: 753 RKDAGFLSYKDHLPVSQVVVGDTDRQGSEAKLSVGPLRCQGDRNYWNAASFPNPSSYLHF 812
Query: 799 PPIRANHSLDVSFYFRTSAPSGVFLENMGGPYCQWRRPYVRVELNTSRDVVFAFDVGNGD 858
+ S D+SFYF+T P GVFLENMG + ++++EL ++ +V F+FDVGNG
Sbjct: 813 STFQGETSADISFYFKTLTPWGVFLENMG------KEDFIKLELKSATEVSFSFDVGNGP 866
Query: 859 ENLTVHSDDFEFNDDEWHLVRAEINVKQARLRVDHRPWVLRPMPLQTYIWMEYDQPLYVG 918
+ V S NDD+WH V AE NVKQA L+VD P +R P + + +E L+VG
Sbjct: 867 VEIVVRSPT-PLNDDQWHRVTAERNVKQASLQVDRLPQQIRKAPTEGHTRLELYSQLFVG 925
Query: 919 SAELKRRPFVGCLRAMRLNGVTLNLEGRANASEGTSPNCTGHCAHPRLPCFHGGRCVERY 978
A ++ F+GC+R++R+NGVTL+LE RA + G C+GHC C +GG+C+ERY
Sbjct: 926 GAG-GQQGFLGCIRSLRMNGVTLDLEERAKVTSGFISGCSGHCTSYGTNCENGGKCLERY 984
Query: 979 SYYTCDCDLTAFDGPYCNHDIGGFFEPGTWMRYNLQSALRSAAREFSHMLSRPVPGYEPG 1038
Y+CDC TA+DG +CN D+G FFE G W+RYN Q+ +A S + + P
Sbjct: 985 HGYSCDCSNTAYDGTFCNKDVGAFFEEGMWLRYNFQAPATNARDSSSRVDNAP------- 1037
Query: 1039 YIPGYDTPGYVPGYHGPGYRLPDYPRPGRPVPGYRGPVYNVTGEEVSFSFSTSSAPAVLL 1098
D P ++ EE+ FSFST+ AP +LL
Sbjct: 1038 -----DQQNSHP---------------------------DLAQEEIRFSFSTTKAPCILL 1065
Query: 1099 YVSSFVRDYMAVLIKDDGTLQLRYQLG--TSPYVYQLTTRPVTDGQPHSINITRVYRNLF 1156
Y+SSF D++AVL+K G+LQ+RY LG PY + R + +GQPHS+NITR + +F
Sbjct: 1066 YISSFTTDFLAVLVKPTGSLQIRYNLGGTREPYNIDVDHRNMANGQPHSVNITRHEKTIF 1125
Query: 1157 IQVDYFPLTEQKFSLLVDSQLDSPKALYLGRVMETGVIDPEIQRYNTPGFSGCLSGVRFN 1216
+++D++P D+ +SPK+L+LG+V+ETG ID EI +YNTPGF+GCLS V+FN
Sbjct: 1126 LKLDHYPSVSYHLPSSSDTLFNSPKSLFLGKVIETGKIDQEIHKYNTPGFTGCLSRVQFN 1185
Query: 1217 NVAPLKTHFRTPRPMTAELAEALRVQGELSESNCGAMPRLVSEVPPELDPWYL------P 1270
+APLK R + + +QGEL ESNCGA P +S + DPW+L
Sbjct: 1186 QIAPLKAALR-----QTNASAHVHIQGELVESNCGASPLTLSPMSSATDPWHLDHLDSAS 1240
Query: 1271 PDFPYYHDEGWV--------AILLGFLVAFLLLGLVGMLVLFYLQNHRYKGSYHTNEPKA 1322
DFPY +G + ++G ++A ++ ++ LV R+KG+YHTNE K
Sbjct: 1241 ADFPYNPGQGQAIRNGVNRNSAIIGGVIAVVIFTILCTLVFLIRYMFRHKGTYHTNEAKG 1300
Query: 1323 A 1323
A
Sbjct: 1301 A 1301
>gi|18640734 contactin associated protein-like 5 [Homo sapiens]
Length = 1306
Score = 938 bits (2424), Expect = 0.0
Identities = 510/1340 (38%), Positives = 761/1340 (56%), Gaps = 93/1340 (6%)
Query: 5 RLFCILLAAVSGAEGWGY----YGCDEELVGPLYARSLGASSYYSLLTAPRFARLH---G 57
RL +L SG G Y CD+ L L + +SS + +P A+L+ G
Sbjct: 6 RLTSVLTLLFSGLWHLGLTATNYNCDDPLASLLSPMAFSSSSDLTGTHSP--AQLNWRVG 63
Query: 58 ISGWSPRIGDPNPWLQIDLMKKHRIRAVATQGSFNSWDWVTRYMLLYGDRVDSWTPFYQR 117
GWSP + WLQ+DL + I AVATQG + S DWVT Y L++ D +W + Q
Sbjct: 64 TGGWSPADSNAQQWLQMDLGNRVEITAVATQGRYGSSDWVTSYSLMFSDTGRNWKQYKQE 123
Query: 118 GHNSTFFGNVNESAVVRHDLHFHFTARYIRIVPLAWNPRGKIGLRLGLYGCPYKADILYF 177
TF GN+N +VV H L AR++R VPL WNP GKIG+R+ +YGC YK+D+ F
Sbjct: 124 DSIWTFAGNMNADSVVHHKLLHSVRARFVRFVPLEWNPSGKIGMRVEVYGCSYKSDVADF 183
Query: 178 DGDDAISYRFPRGVSRSLWDVFAFSFKTEEKDGLLLHAEGAQGDYVTLELEGAHLLLHMS 237
DG ++ YRF + + +L DV + FK+ + DG+L H EG +GD++TLEL+ L LH++
Sbjct: 184 DGRSSLLYRFNQKLMSTLKDVISLKFKSMQGDGVLFHGEGQRGDHITLELQKGRLALHLN 243
Query: 238 LGSSPIQPRPGHTTVSAGGVLNDQHWHYVRVDRFGRDVNFTLDGYVQRFILNGDFERLNL 297
LG S + + + G +L+DQHWH V ++R G+ VNFT+D + Q F G+ + L++
Sbjct: 244 LGDSKARLSSSLPSATLGSLLDDQHWHSVLIERVGKQVNFTVDKHTQHFRTKGETDALDI 303
Query: 298 DTEMFIGGLVGAARKNLAYRHNFRGCIENVIFNRVNIADLAVRRHSRITFEGKVAFRCLD 357
D E+ GG+ + + NF GCIEN+ +N VNI DLA RR +I + G V F C +
Sbjct: 304 DYELSFGGIPVPGKPGTFLKKNFHGCIENLYYNGVNIIDLAKRRKHQI-YTGNVTFSCSE 362
Query: 358 PVPHPINF-GGPHNFVQVPGFPRRGRLAVSFRFRTWDLTGLLLFSRLGDGLGHVELTLSE 416
P PI F +++ +PG P+ L+VSF+FRTW+ GLLL + L +G G + L+L
Sbjct: 363 PQIVPITFVNSSGSYLLLPGTPQIDGLSVSFQFRTWNKDGLLLSTELSEGSGTLLLSLEG 422
Query: 417 GQVNVSIAQSGRKKLQFAAGYRLNDGFWHEVNFVAQENHAVISIDDVEGAEVRVSYPLLI 476
G + + I + + + G LNDG WH V+ A+ N +++DD S + I
Sbjct: 423 GILRLVIQKMTERVAEILTGSNLNDGLWHSVSINARRNRITLTLDDEAAPPAPDSTWVQI 482
Query: 477 RTGTSYFFGGCPKPASRWDCHSNQTAFHGCMELLKVDGQLVNLTLVEGRRLGFYAEVLFD 536
+G SY+FGGCP + C + AF GCM L+ +D Q +L V+ LG ++++ D
Sbjct: 483 YSGNSYYFGGCPDNLTDSQCLNPIKAFQGCMRLIFIDNQPKDLISVQQGSLGNFSDLHID 542
Query: 537 TCGITDRCSPNMCEHDGRCYQSWDDFICYCELTGYKGETCHTPLYKESCEAYRLSGKTSG 596
C I DRC PN CEH G C QSW F C C T Y G TCH +Y++SCE YR G T+G
Sbjct: 543 LCSIKDRCLPNYCEHGGSCSQSWTTFYCNCSDTSYTGATCHNSIYEQSCEVYRHQGNTAG 602
Query: 597 NFTIDPDGSGPLKPFVVYCDIRENRAWTVVRHDRLWTTRVTGSSMERPFLGAIQYWNASW 656
F ID DGSGPL P VYC+I E++ WT V+H+ TRV G++ E+P+ A+ Y S
Sbjct: 603 FFYIDSDGSGPLGPLQVYCNITEDKIWTSVQHNNTELTRVRGANPEKPYAMALDY-GGSM 661
Query: 657 EEVSALANASQHCEQWIEFSCYNSRLLNTAGGYPYSFWIGRNEEQHFYWGGSQPGIQRCA 716
E++ A+ + S+HCEQ + + C SRLLNT G P+++WIGR+ E+H YWGGS PG+Q+C
Sbjct: 662 EQLEAVIDGSEHCEQEVAYHCRRSRLLNTPDGTPFTWWIGRSNERHPYWGGSPPGVQQCE 721
Query: 717 CGLDRSCVDPALYCNCDADQPQWRTDKGLLTFVDHLPVTQVVIGDTNRSTSEAQFFLRPL 776
CGLD SC+D +CNCDAD+ +W D G L+F DHLPVTQ+VI DT+RS SEA + + PL
Sbjct: 722 CGLDESCLDIQHFCNCDADKDEWTNDTGFLSFKDHLPVTQIVITDTDRSNSEAAWRIGPL 781
Query: 777 RCYGDRNSWNTISFHTGAA-LRFPPIRANHSLDVSFYFRTSAPSGVFLENMGGPYCQWRR 835
RCYGDR WN +SF+T A+ L FP A S D+SF+F+T+A SGVFLEN+G +
Sbjct: 782 RCYGDRRFWNAVSFYTEASYLHFPTFHAEFSADISFFFKTTALSGVFLENLG------IK 835
Query: 836 PYVRVELNTSRDVVFAFDVGNGDENLTVHSDDFEFNDDEWHLVRAEINVKQARLRVDHRP 895
++R+E+++ ++ FA DVGNG L V S ND++WH VRAE N+K+ L+VD+ P
Sbjct: 836 DFIRLEISSPSEITFAIDVGNGPVELVVQSPSL-LNDNQWHYVRAERNLKETSLQVDNLP 894
Query: 896 WVLRPMPLQTYIWMEYDQPLYVGSAELKRRPFVGCLRAMRLNGVTLNLEGRANASEGTSP 955
R + + ++ + L+VG +++ F+GC+R++ LNG ++LE RA + G P
Sbjct: 895 RSTRETSEEGHFRLQLNSQLFVGGTSSRQKGFLGCIRSLHLNGQKMDLEERAKVTSGVRP 954
Query: 956 NCTGHCAHPRLPCFHGGRCVERYSYYTCDCDLTAFDGPYCNHDIGGFFEPGTWMRYNLQS 1015
C GHC+ C +GG+CVE+++ Y CDC + ++GP+C ++ FE GT + Y Q
Sbjct: 955 GCPGHCSSYGSICHNGGKCVEKHNGYLCDCTNSPYEGPFCKKEVSAVFEAGTSVTYMFQE 1014
Query: 1016 ---ALRSAAREFSHMLSRPVPGYEPGYIPGYDTPGYVPGYHGPGYRLPDYPRPGRPVPGY 1072
++ + S + + P E
Sbjct: 1015 PYPVTKNISLSSSAIYTDSAPSKE------------------------------------ 1038
Query: 1073 RGPVYNVTGEEVSFSFSTSSAPAVLLYVSSFVRDYMAVLIKDDGTLQLRYQLG-TSPYVY 1131
++ SF T+ AP++LL+++S +D++ VL+ +G+LQ+RY L +V+
Sbjct: 1039 ----------NIALSFVTTQAPSLLLFINSSSQDFVVVLLCKNGSLQVRYHLNKEETHVF 1088
Query: 1132 QLTTRPVTDGQPHSINITRVYRNLFIQVDYFPLTEQKFSLLVDSQLDSPKALYLGRVMET 1191
+ + + H + I R R L IQ+D FS V+ ++ ++L LG+V E
Sbjct: 1089 TIDADNFANRRMHHLKINREGRELTIQMDQQLRLSYNFSPEVEFRV--IRSLTLGKVTEN 1146
Query: 1192 GVIDPEIQRYNTPGFSGCLSGVRFNNVAPLKTHFR--TPRPMTAELAEALRVQGELSESN 1249
+D E+ + N GF+GC+S V++N++APLK R T P+T V G L+ES+
Sbjct: 1147 LGLDSEVAKANAMGFAGCMSSVQYNHIAPLKAALRHATVAPVT--------VHGTLTESS 1198
Query: 1250 CGAM----PRLVSEVPPELDPWYLPPD-FPYYHDEGWVAILLGFLVA---FLLLGLVGML 1301
CG M V+ V DP+ + P + + ++G ++A F++ ++G++
Sbjct: 1199 CGFMVDSDVNAVTTVHSSSDPFGKTDEREPLTNAVRSDSAVIGGVIAVVIFIIFCIIGIM 1258
Query: 1302 VLFYLQNHRYKGSYHTNEPK 1321
F Q +K S+ T++ K
Sbjct: 1259 TRFLYQ---HKQSHRTSQMK 1275
>gi|116284404 cell recognition protein CASPR4 isoform 1 [Homo sapiens]
Length = 1308
Score = 931 bits (2406), Expect = 0.0
Identities = 478/1244 (38%), Positives = 722/1244 (58%), Gaps = 68/1244 (5%)
Query: 18 EGWGYYGCDEELVGPLYARSLGASSYYSLLTAPRFARLH---GISGWSPRIGDPNPWLQI 74
E Y CD+ LV L S +SS S P FARL+ G GWSP + + WLQI
Sbjct: 24 EAGNSYDCDDPLVSALPQASFSSSSELSSSHGPGFARLNRRDGAGGWSPLVSNKYQWLQI 83
Query: 75 DLMKKHRIRAVATQGSFNSWDWVTRYMLLYGDRVDSWTPFYQRGHNSTFFGNVNESAVVR 134
DL ++ + AVATQG + S +WVT Y+L++ D +W + Q F GN N +VV
Sbjct: 84 DLGERMEVTAVATQGGYGSSNWVTSYLLMFSDSGWNWKQYRQEDSIWGFSGNANADSVVY 143
Query: 135 HDLHFHFTARYIRIVPLAWNPRGKIGLRLGLYGCPYKADILYFDGDDAISYRFPRGVSRS 194
+ L AR++R +PL WNP+G+IG+R+ ++GC Y+++++ DG ++ YRF +
Sbjct: 144 YRLQPSIKARFLRFIPLEWNPKGRIGMRIEVFGCAYRSEVVDLDGKSSLLYRFDQKSLSP 203
Query: 195 LWDVFAFSFKTEEKDGLLLHAEGAQGDYVTLELEGAHLLLHMSLGSSPIQPRPGHTTVSA 254
+ D+ + FKT + DG+LLH EG GD++TL+L A L L ++ G + + ++
Sbjct: 204 IKDIISLKFKTMQSDGILLHREGPNGDHITLQLRRARLFLLINSGEAKLPSTSTLVNLTL 263
Query: 255 GGVLNDQHWHYVRVDRFGRDVNFTLDGYVQRFILNGDFERLNLDTEMFIGGLVGAARKNL 314
G +L+DQHWH V + R G+ VNFT+D + F G+F +NLD E+ GG + A K++
Sbjct: 264 GSLLDDQHWHSVLIQRLGKQVNFTVDEHRHHFHARGEFNLMNLDYEISFGG-IPAPGKSV 322
Query: 315 AYRH-NFRGCIENVIFNRVNIADLAVRRHSRITFEGKVAFRCLDPVPHPINFGGPHNFVQ 373
++ H NF GC+EN+ +N V+I DLA ++ +I G V+F C P P+ F +++
Sbjct: 323 SFPHRNFHGCLENLYYNGVDIIDLAKQQKPQIIAMGNVSFSCSQPQSMPVTFLSSRSYLA 382
Query: 374 VPGFPRRGRLAVSFRFRTWDLTGLLLFSRLGDGLGHVELTLSEGQVNVSIAQSGRKKLQF 433
+P F ++ +F+FRTW+ GLLLFS L G + L LS+G++ ++ Q G+
Sbjct: 383 LPDFSGEEEVSATFQFRTWNKAGLLLFSELQLISGGILLFLSDGKLKSNLYQPGKLPSDI 442
Query: 434 AAGYRLNDGFWHEVNFVAQENHAVISIDDVEGAEVRVSYPLLIRTGTSYFFGGCPKPASR 493
AG LNDG WH V+ A++NH +++D + + P I +G +Y+FGGCP +
Sbjct: 443 TAGVELNDGQWHSVSLSAKKNHLSVAVDGQMASAAPLLGPEQIYSGGTYYFGGCPDKSFG 502
Query: 494 WDCHSNQTAFHGCMELLKVDGQLVNLTLVEGRRLGFYAEVLFDTCGITDRCSPNMCEHDG 553
C S F GCM L+ + G++V+L V+ LG ++++ D+CGI+DRC PN CEH G
Sbjct: 503 SKCKSPLGGFQGCMRLISISGKVVDLISVQQGSLGNFSDLQIDSCGISDRCLPNYCEHGG 562
Query: 554 RCYQSWDDFICYCELTGYKGETCHTPLYKESCEAYRLSGKTSGNFTIDPDGSGPLKPFVV 613
C QSW F C C TGY+G TCH +Y++SCEAY+ G TSG + ID DGSGPL+PF++
Sbjct: 563 ECSQSWSTFHCNCTNTGYRGATCHNSIYEQSCEAYKHRGNTSGFYYIDSDGSGPLEPFLL 622
Query: 614 YCDIRENRAWTVVRHDRLWTTRVTGSSMERPFLGAIQYWNASWEEVSALANASQHCEQWI 673
YC++ E AWT+++H+ TRV ++ E P+ G +Y AS E++ A N ++HCEQ
Sbjct: 623 YCNMTET-AWTIIQHNGSDLTRVRNTNPENPYAGFFEYV-ASMEQLQATINRAEHCEQEF 680
Query: 674 EFSCYNSRLLNTAGGYPYSFWIGRNEEQHFYWGGSQPGIQRCACGLDRSCVDPALYCNCD 733
+ C SRL+N G P S+W+GR E YWGGS P +Q+C CGL+ +C+D YCNCD
Sbjct: 681 TYYCKKSRLVNKQDGTPLSWWVGRTNETQTYWGGSSPDLQKCTCGLEGNCIDSQYYCNCD 740
Query: 734 ADQPQWRTDKGLLTFVDHLPVTQVVIGDTNRSTSEAQFFLRPLRCYGDRNSWNTISFHTG 793
AD+ +W D GLL + +HLPVT++VI DT R SEA + L PL C GDR+ WN+ SF T
Sbjct: 741 ADRNEWTNDTGLLAYKEHLPVTKIVITDTGRLHSEAAYKLGPLLCQGDRSFWNSASFDTE 800
Query: 794 AA-LRFPPIRANHSLDVSFYFRTSAPSGVFLENMGGPYCQWRRPYVRVELNTSRDVVFAF 852
A+ L FP S DVSF+F+T+A SGVFLEN+G ++R+EL + V F+F
Sbjct: 801 ASYLHFPTFHGELSADVSFFFKTTASSGVFLENLG------IADFIRIELRSPTVVTFSF 854
Query: 853 DVGNGDENLTVHSDDFEFNDDEWHLVRAEINVKQARLRVDHRPWVLRPMPLQTYIWMEYD 912
DVGNG ++V S FND++WH VR E N+K+A L+VD +P P ++ ++ +
Sbjct: 855 DVGNGPFEISVQSPT-HFNDNQWHHVRVERNMKEASLQVDQLTPKTQPAPADGHVLLQLN 913
Query: 913 QPLYVGSAELKRRPFVGCLRAMRLNGVTLNLEGRANASEGTSPNCTGHCAHPRLPCFHGG 972
L+VG ++R F+GC+R+++LNG+TL+LE RA + P C GHC+ C +GG
Sbjct: 914 SQLFVGGTATRQRGFLGCIRSLQLNGMTLDLEERAQVTPEVQPGCRGHCSSYGKLCRNGG 973
Query: 973 RCVERYSYYTCDCDLTAFDGPYCNHDIGGFFEPGTWMRYNLQSALRSAAREFSHMLSRPV 1032
+C ER + CDC +A+ GP+C+++I +F G+ + YN Q
Sbjct: 974 KCRERPIGFFCDCTFSAYTGPFCSNEISAYFGSGSSVIYNFQE----------------- 1016
Query: 1033 PGYEPGYIPGYDTPGYVPGYHGPGYRLPDYPRPGRPVPGYRGPVYNVTGEEVSFSFSTSS 1092
Y+ ++ + +HG ++ E + FSF T+
Sbjct: 1017 -----NYLLSKNSSSHAASFHGD---------------------MKLSREMIKFSFRTTR 1050
Query: 1093 APAVLLYVSSFVRDYMAVLIKDDGTLQLRYQLG--TSPYVYQLTTRPVTDGQPHSINITR 1150
P++LL+VSSF ++Y++V+I +G+LQ+RY+L P V + + DGQ H I I R
Sbjct: 1051 TPSLLLFVSSFYKEYLSVIIAKNGSLQIRYKLNKYQEPDVVNFDFKNMADGQLHHIMINR 1110
Query: 1151 VYRNLFIQVDYFPLTEQKFSLLVDSQLDSPKALYLGRVMETGVIDPEIQRYNTPGFSGCL 1210
+FI++D ++ L ++ + K+L LGR++E +D + GF+GCL
Sbjct: 1111 EEGVVFIEID--DNRRRQVHLSSGTEFSAVKSLVLGRILEHSDVDQDTALAGAQGFTGCL 1168
Query: 1211 SGVRFNNVAPLKTHFRTPRPMTAELAEALRVQGELSESNCGAMP 1254
S V+ ++VAPLK P + + V G ++ES+C A P
Sbjct: 1169 SAVQLSHVAPLKAALHPSHP------DPVTVTGHVTESSCMAQP 1206
>gi|239743754 PREDICTED: hypothetical protein LOC389722 isoform 1
[Homo sapiens]
Length = 1288
Score = 884 bits (2284), Expect = 0.0
Identities = 455/1212 (37%), Positives = 690/1212 (56%), Gaps = 60/1212 (4%)
Query: 25 CDEELVGPLYARSLGASSYYSLLTAPRFARLH---GISGWSPRIGDPNPWLQIDLMKKHR 81
CD L L S +SS S P F+RL+ G GW+P + + WLQIDL ++
Sbjct: 31 CDSPLASALPRSSFSSSSELSSSHGPGFSRLNRRDGAGGWTPLVSNKYQWLQIDLGERME 90
Query: 82 IRAVATQGSFNSWDWVTRYMLLYGDRVDSWTPFYQRGHNSTFFGNVNESAVVRHDLHFHF 141
+ AVATQG + S DWVT Y+L++ D +W + + F GN N +VV + L F
Sbjct: 91 VTAVATQGGYGSSDWVTSYLLMFSDGGRNWKQYRREESIWGFPGNTNADSVVHYRLQPPF 150
Query: 142 TARYIRIVPLAWNPRGKIGLRLGLYGCPYKADILYFDGDDAISYRFPRGVSRSLWDVFAF 201
AR++R +PLAWNPRG+IG+R+ +YGC YK++++YFDG A+ Y + + + DV +
Sbjct: 151 EARFLRFLPLAWNPRGRIGMRIEVYGCAYKSEVVYFDGQSALLYTLDKKPLKPIRDVISL 210
Query: 202 SFKTEEKDGLLLHAEGAQGDYVTLELEGAHLLLHMSLGSSPIQPRPGHTTVSAGGVLNDQ 261
FK + +G+LLH EG G+++TLEL L+ ++ G++ + T++ G +L+DQ
Sbjct: 211 KFKAMQSNGILLHREGQHGNHITLELIKGKLVFFLNSGNAKLPSTIAPVTLTLGSLLDDQ 270
Query: 262 HWHYVRVDRFGRDVNFTLDGYVQRFILNGDFERLNLDTEMFIGGLVGAARKNLAYRHNFR 321
HWH V ++ VNFT+D + F GD L+L+ E+ GG++ R R +F
Sbjct: 271 HWHSVLIELLDTQVNFTVDKHTHHFQAKGDSSNLDLNFEISFGGILSPGRSRAFTRKSFH 330
Query: 322 GCIENVIFNRVNIADLAVRRHSRITFEGKVAFRCLDPVPHPINFGGPHNFVQVPGFPRRG 381
GC+EN+ +N V++ +LA + +I G V+F C P P+ F +++ +PG
Sbjct: 331 GCLENLYYNGVDVTELAKKHKPQILMMGNVSFSCPQPQTVPVTFLSSRSYLALPGNSGED 390
Query: 382 RLAVSFRFRTWDLTGLLLFSRLGDGLGHVELTLSEGQVNVSIAQSGRKKLQFAAGYRLND 441
+++V+F+FRTW+ G LLF L G G L L +G++ +S+ Q+G+ AG LND
Sbjct: 391 KVSVTFQFRTWNRAGHLLFGELQRGSGSFVLFLKDGKLKLSLFQAGQSPRNVTAGAGLND 450
Query: 442 GFWHEVNFVAQENHAVISIDDVEGAEVRVSYPLLIRTGTSYFFGGCPKPASRWDCHSNQT 501
G WH V+F A+ +H + +DD + V+ +LI +G +Y+FGGC +S C S
Sbjct: 451 GQWHSVSFSAKWSHMNVVVDDDTAVQPLVA--VLIDSGDTYYFGGCLGNSSGSGCKSPLG 508
Query: 502 AFHGCMELLKVDGQLVNLTLVEGRRLGFYAEVLFDTCGITDRCSPNMCEHDGRCYQSWDD 561
F GC+ L+ + + V+ LV+ LG + ++ D+CGITDRC P+ CEH G C QSWD
Sbjct: 509 GFQGCLRLITIGDKAVDPILVQQGALGSFRDLQIDSCGITDRCLPSYCEHGGECSQSWDT 568
Query: 562 FICYCELTGYKGETCHTPLYKESCEAYRLSGKTSGNFTIDPDGSGPLKPFVVYCDIRENR 621
F C C TGY GETCH+ LY++SCEA++ G SG + ID DGSGPL PF+VYC++ +
Sbjct: 569 FSCDCLGTGYTGETCHSSLYEQSCEAHKHRGNPSGLYYIDADGSGPLGPFLVYCNMTADS 628
Query: 622 AWTVVRHDRLWTTRVTGSSMERPFLGAIQYWNASWEEVSALANASQHCEQWIEFSCYNSR 681
AWTVVRH + G+ P + A ++ A N ++ CEQ + C +R
Sbjct: 629 AWTVVRHGGPDAVTLRGAPSGHPLSAVSFAYAAGAGQLRAAVNLAERCEQRLALRCGTAR 688
Query: 682 LLNTAGGYPYSFWIGRNEEQHFYWGGSQPGIQRCACGLDRSCVDPALYCNCDADQPQWRT 741
++ G P S+W+GR E H WGGS P Q+C CGL+ +C+D YCNCDA Q +W +
Sbjct: 689 RPDSRDGTPLSWWVGRTNETHTSWGGSLPDAQKCTCGLEGNCIDSQYYCNCDAGQNEWTS 748
Query: 742 DKGLLTFVDHLPVTQVVIGDTNRSTSEAQFFLRPLRCYGDRNSWNTISFHTGAA-LRFPP 800
D +L+ +HLPVTQ+V+ DT + SEA + L PL C GD++ WN+ SF+T + L FP
Sbjct: 749 DTIVLSQKEHLPVTQIVMTDTGQPHSEADYTLGPLLCRGDKSFWNSASFNTETSYLHFPA 808
Query: 801 IRANHSLDVSFYFRTSAPSGVFLENMGGPYCQWRRPYVRVELNTSRDVVFAFDVGNGDEN 860
+ DV F+F+T+ SGVF+EN+G ++R+EL +V F+FDVGNG
Sbjct: 809 FHGELTADVCFFFKTTVSSGVFMENLG------ITDFIRIELRAPTEVTFSFDVGNGPCE 862
Query: 861 LTVHSDDFEFNDDEWHLVRAEINVKQARLRVDHRPWVLRPMPLQTYIWMEYDQPLYVGSA 920
+TV S FND++WH VRAE NVK A L+VD P ++P P ++ ++ + L++G
Sbjct: 863 VTVQSPT-PFNDNQWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFIGGT 921
Query: 921 ELKRRPFVGCLRAMRLNGVTLNLEGRANASEGTSPNCTGHCAHPRLPCFHGGRCVERYSY 980
++R F+GC+R+++LNGV L+LE RA + G P C GHC+ C +GGRC E+
Sbjct: 922 ATRQRGFLGCIRSLQLNGVALDLEERATVTPGVEPGCAGHCSTYGHLCRNGGRCREKRRG 981
Query: 981 YTCDCDLTAFDGPYCNHDIGGFFEPGTWMRYNLQSALRSAAREFSHMLSRPVPGYEPGYI 1040
TCDC +A+DGP+C+++I +F G+ M Y+ Q + S + S
Sbjct: 982 VTCDCAFSAYDGPFCSNEISAYFATGSSMTYHFQEHYTLSENSSSLVSSL---------- 1031
Query: 1041 PGYDTPGYVPGYHGPGYRLPDYPRPGRPVPGYRGPVYNVTGEEVSFSFSTSSAPAVLLYV 1100
YR +T E ++ SF T+ +P++LLYV
Sbjct: 1032 -------------------------------YRD--VTLTREMITLSFRTTRSPSLLLYV 1058
Query: 1101 SSFVRDYMAVLIKDDGTLQLRYQLG--TSPYVYQLTTRPVTDGQPHSINITRVYRNLFIQ 1158
SSF +Y++V++ ++G+LQ+RY+L +P + + + DGQ H + I R +
Sbjct: 1059 SSFYEEYLSVILANNGSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVKINR--EEAVVM 1116
Query: 1159 VDYFPLTEQKFSLLVDSQLDSPKALYLGRVMETGVIDPEIQRYNTPGFSGCLSGVRFNNV 1218
V+ +++ L ++ ++ K+L LG+V+E DP+ +R T GF+GCLS VRF
Sbjct: 1117 VEVNQSAKKQVILSSGTEFNAVKSLILGKVLEAAGADPDTRRAATSGFTGCLSAVRFGRA 1176
Query: 1219 APLKTHFRTPRP 1230
APLK R P
Sbjct: 1177 APLKAALRPSGP 1188
>gi|148664242 cell recognition protein CASPR4 isoform 2 [Homo sapiens]
Length = 1235
Score = 882 bits (2278), Expect = 0.0
Identities = 459/1238 (37%), Positives = 691/1238 (55%), Gaps = 114/1238 (9%)
Query: 23 YGCDEELVGPLYARSLGASSYYSLLTAPRFARLH---GISGWSPRIGDPNPWLQIDLMKK 79
Y CD+ LV L S +SS S P FARL+ G GWSP + + WLQIDL ++
Sbjct: 4 YDCDDPLVSALPQASFSSSSELSSSHGPGFARLNRRDGAGGWSPLVSNKYQWLQIDLGER 63
Query: 80 HRIRAVATQGSFNSWDWVTRYMLLYGDRVDSWTPFYQRGHNSTFFGNVNESAVVRHDLHF 139
+ AVATQG + S +WVT Y+L++ D +W + Q F GN N +VV + L
Sbjct: 64 MEVTAVATQGGYGSSNWVTSYLLMFSDSGWNWKQYRQEDSIWGFSGNANADSVVYYRLQP 123
Query: 140 HFTARYIRIVPLAWNPRGKIGLRLGLYGCPYKADILYFDGDDAISYRFPRGVSRSLWDVF 199
AR++R +PL WNP+G+IG+R+ ++GC Y+++++ DG ++ YRF + + D+
Sbjct: 124 SIKARFLRFIPLEWNPKGRIGMRIEVFGCAYRSEVVDLDGKSSLLYRFDQKSLSPIKDII 183
Query: 200 AFSFKTEEKDGLLLHAEGAQGDYVTLELEGAHLLLHMSLGSSPIQPRPGHTTVSAGGVLN 259
+ FKT + DG+LLH EG GD++TL+L A L L ++ G + + ++ G +L+
Sbjct: 184 SLKFKTMQSDGILLHREGPNGDHITLQLRRARLFLLINSGEAKLPSTSTLVNLTLGSLLD 243
Query: 260 DQHWHYVRVDRFGRDVNFTLDGYVQRFILNGDFERLNLDTEMFIGGLVGAARKNLAYRHN 319
DQHWH V + R G+ VNFT+D + F G+F +NLD
Sbjct: 244 DQHWHSVLIQRLGKQVNFTVDEHRHHFHARGEFNLMNLD--------------------- 282
Query: 320 FRGCIENVIFNRVNIADLAVRRHSRITFEGKVAFRCLDPVPHPINFGGPHNFVQVPGFPR 379
+EG V+F C P P+ F +++ +P F
Sbjct: 283 ---------------------------YEGNVSFSCSQPQSMPVTFLSSRSYLALPDFSG 315
Query: 380 RGRLAVSFRFRTWDLTGLLLFSRLGDGLGHVELTLSEGQVNVSIAQSGRKKLQFAAGYRL 439
++ +F+FRTW+ GLLLFS L G + L LS+G++ ++ Q G+ AG L
Sbjct: 316 EEEVSATFQFRTWNKAGLLLFSELQLISGGILLFLSDGKLKSNLYQPGKLPSDITAGVEL 375
Query: 440 NDGFWHEVNFVAQENHAVISIDDVEGAEVRVSYPLLIRTGTSYFFGGCPKPASRWDCHSN 499
NDG WH V+ A++NH +++D + + P I +G +Y+FGGCP + C S
Sbjct: 376 NDGQWHSVSLSAKKNHLSVAVDGQMASAAPLLGPEQIYSGGTYYFGGCPDKSFGSKCKSP 435
Query: 500 QTAFHGCMELLKVDGQLVNLTLVEGRRLGFYAEVLFDTCGITDRCSPNMCEHDGRCYQSW 559
F GCM L+ + G++V+L V+ LG ++++ D+CGI+DRC PN CEH G C QSW
Sbjct: 436 LGGFQGCMRLISISGKVVDLISVQQGSLGNFSDLQIDSCGISDRCLPNYCEHGGECSQSW 495
Query: 560 DDFICYCELTGYKGETCHTPLYKESCEAYRLSGKTSGNFTIDPDGSGPLKPFVVYCDIRE 619
F C C TGY+G TCH +Y++SCEAY+ G TSG + ID DGSGPL+PF++YC++ E
Sbjct: 496 STFHCNCTNTGYRGATCHNSIYEQSCEAYKHRGNTSGFYYIDSDGSGPLEPFLLYCNMTE 555
Query: 620 NRAWTVVRHDRLWTTRVTGSSMERPFLGAIQYWNASWEEVSALANASQHCEQWIEFSCYN 679
AWT+++H+ TRV ++ E P+ G +Y AS E++ A N ++HCEQ + C
Sbjct: 556 T-AWTIIQHNGSDLTRVRNTNPENPYAGFFEYV-ASMEQLQATINRAEHCEQEFTYYCKK 613
Query: 680 SRLLNTAGGYPYSFWIGRNEEQHFYWGGSQPGIQRCACGLDRSCVDPALYCNCDADQPQW 739
SRL+N G P S+W+GR E YWGGS P +Q+C CGL+ +C+D YCNCDAD+ +W
Sbjct: 614 SRLVNKQDGTPLSWWVGRTNETQTYWGGSSPDLQKCTCGLEGNCIDSQYYCNCDADRNEW 673
Query: 740 RTDKGLLTFVDHLPVTQVVIGDTNRSTSEAQFFLRPLRCYGDRNSWNTISFHTGAA-LRF 798
D GLL + +HLPVT++VI DT R SEA + L PL C GDR+ WN+ SF T A+ L F
Sbjct: 674 TNDTGLLAYKEHLPVTKIVITDTGRLHSEAAYKLGPLLCQGDRSFWNSASFDTEASYLHF 733
Query: 799 PPIRANHSLDVSFYFRTSAPSGVFLENMGGPYCQWRRPYVRVELNTSRDVVFAFDVGNGD 858
P S DVSF+F+T+A SGVFLEN+G ++R+EL + V F+FDVGNG
Sbjct: 734 PTFHGELSADVSFFFKTTASSGVFLENLG------IADFIRIELRSPTVVTFSFDVGNGP 787
Query: 859 ENLTVHSDDFEFNDDEWHLVRAEINVKQARLRVDHRPWVLRPMPLQTYIWMEYDQPLYVG 918
++V S FND++WH VR E N+K+A L+VD +P P ++ ++ + L+VG
Sbjct: 788 FEISVQSPT-HFNDNQWHHVRVERNMKEASLQVDQLTPKTQPAPADGHVLLQLNSQLFVG 846
Query: 919 SAELKRRPFVGCLRAMRLNGVTLNLEGRANASEGTSPNCTGHCAHPRLPCFHGGRCVERY 978
++R F+GC+R+++LNG+TL+LE RA + P C GHC+ C +GG+C ER
Sbjct: 847 GTATRQRGFLGCIRSLQLNGMTLDLEERAQVTPEVQPGCRGHCSSYGKLCRNGGKCRERP 906
Query: 979 SYYTCDCDLTAFDGPYCNHDIGGFFEPGTWMRYNLQSALRSAAREFSHMLSRPVPGYEPG 1038
+ CDC +A+ GP+C+++I +F G+ + YN Q
Sbjct: 907 IGFFCDCTFSAYTGPFCSNEISAYFGSGSSVIYNFQE----------------------N 944
Query: 1039 YIPGYDTPGYVPGYHGPGYRLPDYPRPGRPVPGYRGPVYNVTGEEVSFSFSTSSAPAVLL 1098
Y+ ++ + +HG ++ E + FSF T+ P++LL
Sbjct: 945 YLLSKNSSSHAASFHGD---------------------MKLSREMIKFSFRTTRTPSLLL 983
Query: 1099 YVSSFVRDYMAVLIKDDGTLQLRYQLG--TSPYVYQLTTRPVTDGQPHSINITRVYRNLF 1156
+VSSF ++Y++V+I +G+LQ+RY+L P V + + DGQ H I I R +F
Sbjct: 984 FVSSFYKEYLSVIIAKNGSLQIRYKLNKYQEPDVVNFDFKNMADGQLHHIMINREEGVVF 1043
Query: 1157 IQVDYFPLTEQKFSLLVDSQLDSPKALYLGRVMETGVIDPEIQRYNTPGFSGCLSGVRFN 1216
I++D ++ L ++ + K+L LGR++E +D + GF+GCLS V+ +
Sbjct: 1044 IEID--DNRRRQVHLSSGTEFSAVKSLVLGRILEHSDVDQDTALAGAQGFTGCLSAVQLS 1101
Query: 1217 NVAPLKTHFRTPRPMTAELAEALRVQGELSESNCGAMP 1254
+VAPLK P + + V G ++ES+C A P
Sbjct: 1102 HVAPLKAALHPSHP------DPVTVTGHVTESSCMAQP 1133
>gi|47519929 cell recognition molecule CASPR3 [Homo sapiens]
Length = 1288
Score = 879 bits (2270), Expect = 0.0
Identities = 455/1212 (37%), Positives = 689/1212 (56%), Gaps = 60/1212 (4%)
Query: 25 CDEELVGPLYARSLGASSYYSLLTAPRFARLH---GISGWSPRIGDPNPWLQIDLMKKHR 81
CD L L S +SS S P F+RL+ G GW+P + + WLQIDL ++
Sbjct: 31 CDAPLASALPRSSFSSSSELSSSHGPGFSRLNRRDGAGGWTPLVSNKYQWLQIDLGERME 90
Query: 82 IRAVATQGSFNSWDWVTRYMLLYGDRVDSWTPFYQRGHNSTFFGNVNESAVVRHDLHFHF 141
+ AVATQG + S DWVT Y+L++ D +W + + F GN N +VV + L F
Sbjct: 91 VTAVATQGGYGSSDWVTSYLLMFSDGGRNWKQYRREESIWGFPGNTNADSVVHYRLQPPF 150
Query: 142 TARYIRIVPLAWNPRGKIGLRLGLYGCPYKADILYFDGDDAISYRFPRGVSRSLWDVFAF 201
AR++R +PLAWNPRG+IG+R+ +YGC YK++++YFDG A+ YR + + + DV +
Sbjct: 151 EARFLRFLPLAWNPRGRIGMRIEVYGCAYKSEVVYFDGQSALLYRLDKKPLKPIRDVISL 210
Query: 202 SFKTEEKDGLLLHAEGAQGDYVTLELEGAHLLLHMSLGSSPIQPRPGHTTVSAGGVLNDQ 261
FK + +G+LLH EG G+++TLEL L+ ++ G++ + T++ G +L+DQ
Sbjct: 211 KFKAMQSNGILLHREGQHGNHITLELIKGKLVFFLNSGNAKLPSTIAPVTLTLGSLLDDQ 270
Query: 262 HWHYVRVDRFGRDVNFTLDGYVQRFILNGDFERLNLDTEMFIGGLVGAARKNLAYRHNFR 321
HWH V ++ VNFT+D + F GD L+L+ E+ GG+ R R +F
Sbjct: 271 HWHSVLIELLDTQVNFTVDKHTHHFQAKGDSSYLDLNFEISFGGIPTPGRSRAFRRKSFH 330
Query: 322 GCIENVIFNRVNIADLAVRRHSRITFEGKVAFRCLDPVPHPINFGGPHNFVQVPGFPRRG 381
GC+EN+ +N V++ +LA + +I G V+F C P P+ F +++ +PG
Sbjct: 331 GCLENLYYNGVDVTELAKKHKPQILMMGNVSFSCPQPQTVPVTFLSSRSYLALPGNSGED 390
Query: 382 RLAVSFRFRTWDLTGLLLFSRLGDGLGHVELTLSEGQVNVSIAQSGRKKLQFAAGYRLND 441
+++V+F+FRTW+ G LLF L G G L L +G++ +S+ Q G+ AG LND
Sbjct: 391 KVSVTFQFRTWNRAGHLLFGELRRGSGSFVLFLKDGKLKLSLFQPGQSPRNVTAGAGLND 450
Query: 442 GFWHEVNFVAQENHAVISIDDVEGAEVRVSYPLLIRTGTSYFFGGCPKPASRWDCHSNQT 501
G WH V+F A+ +H + +DD + V+ +LI +G +Y+FGGC +S C S
Sbjct: 451 GQWHSVSFSAKWSHMNVVVDDDTAVQPLVA--VLIDSGDTYYFGGCLDNSSGSGCKSPLG 508
Query: 502 AFHGCMELLKVDGQLVNLTLVEGRRLGFYAEVLFDTCGITDRCSPNMCEHDGRCYQSWDD 561
F GC+ L+ + + V+ LV+ LG + ++ D+CGITDRC P+ CEH G C QSWD
Sbjct: 509 GFQGCLRLITIGDKAVDPILVQQGALGSFRDLQIDSCGITDRCLPSYCEHGGECSQSWDT 568
Query: 562 FICYCELTGYKGETCHTPLYKESCEAYRLSGKTSGNFTIDPDGSGPLKPFVVYCDIRENR 621
F C C TGY GETCH+ LY++SCEA++ G SG + ID DGSGPL PF+VYC++ +
Sbjct: 569 FSCDCLGTGYTGETCHSSLYEQSCEAHKHRGNPSGLYYIDADGSGPLGPFLVYCNMTADA 628
Query: 622 AWTVVRHDRLWTTRVTGSSMERPFLGAIQYWNASWEEVSALANASQHCEQWIEFSCYNSR 681
AWTVV+H + G+ P + A ++ + N ++ CEQ + C +R
Sbjct: 629 AWTVVQHGGPDAVTLRGAPSGHPRSAVSFAYAAGAGQLRSAVNLAERCEQRLALRCGTAR 688
Query: 682 LLNTAGGYPYSFWIGRNEEQHFYWGGSQPGIQRCACGLDRSCVDPALYCNCDADQPQWRT 741
++ G P S+W+GR E H WGGS P Q+C CGL+ +C+D YCNCDA + +W +
Sbjct: 689 RPDSRDGTPLSWWVGRTNETHTSWGGSLPDAQKCTCGLEGNCIDSQYYCNCDAGRNEWTS 748
Query: 742 DKGLLTFVDHLPVTQVVIGDTNRSTSEAQFFLRPLRCYGDRNSWNTISFHTGAA-LRFPP 800
D +L+ +HLPVTQ+V+ D R SEA + L PL C GD++ WN+ SF+T + L FP
Sbjct: 749 DTIVLSQKEHLPVTQIVMTDAGRPHSEAAYTLGPLLCRGDQSFWNSASFNTETSYLHFPA 808
Query: 801 IRANHSLDVSFYFRTSAPSGVFLENMGGPYCQWRRPYVRVELNTSRDVVFAFDVGNGDEN 860
+ DV F+F+T+ SGVF+EN+G ++R+EL +V F+FDVGNG
Sbjct: 809 FHGELTADVCFFFKTTVSSGVFMENLG------ITDFIRIELRAPTEVTFSFDVGNGPCE 862
Query: 861 LTVHSDDFEFNDDEWHLVRAEINVKQARLRVDHRPWVLRPMPLQTYIWMEYDQPLYVGSA 920
+TV S FND++WH VRAE NVK A L+VD P ++P P ++ ++ + L++G
Sbjct: 863 VTVQSPT-PFNDNQWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFIGGT 921
Query: 921 ELKRRPFVGCLRAMRLNGVTLNLEGRANASEGTSPNCTGHCAHPRLPCFHGGRCVERYSY 980
++R F+GC+R+++LNGV L+LE RA + G P C GHC+ C +GGRC E+
Sbjct: 922 ATRQRGFLGCIRSLQLNGVALDLEERATVTPGVEPGCAGHCSTYGHLCRNGGRCREKRRG 981
Query: 981 YTCDCDLTAFDGPYCNHDIGGFFEPGTWMRYNLQSALRSAAREFSHMLSRPVPGYEPGYI 1040
TCDC +A+DGP+C+++I +F G+ M Y+ Q Y
Sbjct: 982 VTCDCAFSAYDGPFCSNEISAYFATGSSMTYHFQE----------------------HYT 1019
Query: 1041 PGYDTPGYVPGYHGPGYRLPDYPRPGRPVPGYRGPVYNVTGEEVSFSFSTSSAPAVLLYV 1100
++ V H R V +T E ++ SF T+ P++LLYV
Sbjct: 1020 LSENSSSLVSSLH-------------RDV--------TLTREMITLSFRTTRTPSLLLYV 1058
Query: 1101 SSFVRDYMAVLIKDDGTLQLRYQLG--TSPYVYQLTTRPVTDGQPHSINITRVYRNLFIQ 1158
SSF +Y++V++ ++G+LQ+RY+L +P + + + DGQ H + I R +
Sbjct: 1059 SSFYEEYLSVILANNGSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVKINR--EEAVVM 1116
Query: 1159 VDYFPLTEQKFSLLVDSQLDSPKALYLGRVMETGVIDPEIQRYNTPGFSGCLSGVRFNNV 1218
V+ T+++ L ++ ++ K+L LG+V+E DP+ +R T GF+GCLS VRF
Sbjct: 1117 VEVNQSTKKQVILSSGTEFNAVKSLILGKVLEAAGADPDTRRAATSGFTGCLSAVRFGRA 1176
Query: 1219 APLKTHFRTPRP 1230
APLK R P
Sbjct: 1177 APLKAALRPSGP 1188
>gi|239743756 PREDICTED: hypothetical protein LOC389722 isoform 2
[Homo sapiens]
Length = 1207
Score = 708 bits (1827), Expect = 0.0
Identities = 354/897 (39%), Positives = 530/897 (59%), Gaps = 14/897 (1%)
Query: 25 CDEELVGPLYARSLGASSYYSLLTAPRFARLH---GISGWSPRIGDPNPWLQIDLMKKHR 81
CD L L S +SS S P F+RL+ G GW+P + + WLQIDL ++
Sbjct: 31 CDSPLASALPRSSFSSSSELSSSHGPGFSRLNRRDGAGGWTPLVSNKYQWLQIDLGERME 90
Query: 82 IRAVATQGSFNSWDWVTRYMLLYGDRVDSWTPFYQRGHNSTFFGNVNESAVVRHDLHFHF 141
+ AVATQG + S DWVT Y+L++ D +W + + F GN N +VV + L F
Sbjct: 91 VTAVATQGGYGSSDWVTSYLLMFSDGGRNWKQYRREESIWGFPGNTNADSVVHYRLQPPF 150
Query: 142 TARYIRIVPLAWNPRGKIGLRLGLYGCPYKADILYFDGDDAISYRFPRGVSRSLWDVFAF 201
AR++R +PLAWNPRG+IG+R+ +YGC YK++++YFDG A+ Y + + + DV +
Sbjct: 151 EARFLRFLPLAWNPRGRIGMRIEVYGCAYKSEVVYFDGQSALLYTLDKKPLKPIRDVISL 210
Query: 202 SFKTEEKDGLLLHAEGAQGDYVTLELEGAHLLLHMSLGSSPIQPRPGHTTVSAGGVLNDQ 261
FK + +G+LLH EG G+++TLEL L+ ++ G++ + T++ G +L+DQ
Sbjct: 211 KFKAMQSNGILLHREGQHGNHITLELIKGKLVFFLNSGNAKLPSTIAPVTLTLGSLLDDQ 270
Query: 262 HWHYVRVDRFGRDVNFTLDGYVQRFILNGDFERLNLDTEMFIGGLVGAARKNLAYRHNFR 321
HWH V ++ VNFT+D + F GD L+L+ E+ GG++ R R +F
Sbjct: 271 HWHSVLIELLDTQVNFTVDKHTHHFQAKGDSSNLDLNFEISFGGILSPGRSRAFTRKSFH 330
Query: 322 GCIENVIFNRVNIADLAVRRHSRITFEGKVAFRCLDPVPHPINFGGPHNFVQVPGFPRRG 381
GC+EN+ +N V++ +LA + +I G V+F C P P+ F +++ +PG
Sbjct: 331 GCLENLYYNGVDVTELAKKHKPQILMMGNVSFSCPQPQTVPVTFLSSRSYLALPGNSGED 390
Query: 382 RLAVSFRFRTWDLTGLLLFSRLGDGLGHVELTLSEGQVNVSIAQSGRKKLQFAAGYRLND 441
+++V+F+FRTW+ G LLF L G G L L +G++ +S+ Q+G+ AG LND
Sbjct: 391 KVSVTFQFRTWNRAGHLLFGELQRGSGSFVLFLKDGKLKLSLFQAGQSPRNVTAGAGLND 450
Query: 442 GFWHEVNFVAQENHAVISIDDVEGAEVRVSYPLLIRTGTSYFFGGCPKPASRWDCHSNQT 501
G WH V+F A+ +H + +DD + V+ +LI +G +Y+FGGC +S C S
Sbjct: 451 GQWHSVSFSAKWSHMNVVVDDDTAVQPLVA--VLIDSGDTYYFGGCLGNSSGSGCKSPLG 508
Query: 502 AFHGCMELLKVDGQLVNLTLVEGRRLGFYAEVLFDTCGITDRCSPNMCEHDGRCYQSWDD 561
F GC+ L+ + + V+ LV+ LG + ++ D+CGITDRC P+ CEH G C QSWD
Sbjct: 509 GFQGCLRLITIGDKAVDPILVQQGALGSFRDLQIDSCGITDRCLPSYCEHGGECSQSWDT 568
Query: 562 FICYCELTGYKGETCHTPLYKESCEAYRLSGKTSGNFTIDPDGSGPLKPFVVYCDIRENR 621
F C C TGY GETCH+ LY++SCEA++ G SG + ID DGSGPL PF+VYC++ ++
Sbjct: 569 FSCDCLGTGYTGETCHSSLYEQSCEAHKHRGNPSGLYYIDADGSGPLGPFLVYCNMTDS- 627
Query: 622 AWTVVRHDRLWTTRVTGSSMERPFLGAIQYWNASWEEVSALANASQHCEQWIEFSCYNSR 681
AWTVVRH + G+ P + A ++ A N ++ CEQ + C +R
Sbjct: 628 AWTVVRHGGPDAVTLRGAPSGHPLSAVSFAYAAGAGQLRAAVNLAERCEQRLALRCGTAR 687
Query: 682 LLNTAGGYPYSFWIGRNEEQHFYWGGSQPGIQRCACGLDRSCVDPALYCNCDADQPQWRT 741
++ G P S+W+GR E H WGGS P Q+C CGL+ +C+D YCNCDA Q +W +
Sbjct: 688 RPDSRDGTPLSWWVGRTNETHTSWGGSLPDAQKCTCGLEGNCIDSQYYCNCDAGQNEWTS 747
Query: 742 DKGLLTFVDHLPVTQVVIGDTNRSTSEAQFFLRPLRCYGDRNSWNTISFHTGAA-LRFPP 800
D +L+ +HLPVTQ+V+ DT + SEA + L PL C GD++ WN+ SF+T + L FP
Sbjct: 748 DTIVLSQKEHLPVTQIVMTDTGQPHSEADYTLGPLLCRGDKSFWNSASFNTETSYLHFPA 807
Query: 801 IRANHSLDVSFYFRTSAPSGVFLENMGGPYCQWRRPYVRVELNTSRDVVFAFDVGNGDEN 860
+ DV F+F+T+ SGVF+EN+G ++R+EL +V F+FDVGNG
Sbjct: 808 FHGELTADVCFFFKTTVSSGVFMENLG------ITDFIRIELRAPTEVTFSFDVGNGPCE 861
Query: 861 LTVHSDDFEFNDDEWHLVRAEINVKQARLRVDHRPWVLRPMPLQTYIWMEYDQPLYV 917
+TV S FND++WH VRAE NVK A L+VD P ++P P ++ ++ + L++
Sbjct: 862 VTVQSPT-PFNDNQWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFI 917
Score = 105 bits (261), Expect = 4e-22
Identities = 55/154 (35%), Positives = 94/154 (61%), Gaps = 4/154 (2%)
Query: 1079 VTGEEVSFSFSTSSAPAVLLYVSSFVRDYMAVLIKDDGTLQLRYQLGT--SPYVYQLTTR 1136
+T E ++ SF T+ +P++LLYVSSF +Y++V++ ++G+LQ+RY+L +P + +
Sbjct: 956 LTREMITLSFRTTRSPSLLLYVSSFYEEYLSVILANNGSLQIRYKLDRHQNPDAFTFDFK 1015
Query: 1137 PVTDGQPHSINITRVYRNLFIQVDYFPLTEQKFSLLVDSQLDSPKALYLGRVMETGVIDP 1196
+ DGQ H + I R + ++V+ +++ L ++ ++ K+L LG+V+E DP
Sbjct: 1016 NMADGQLHQVKINREEAVVMVEVNQS--AKKQVILSSGTEFNAVKSLILGKVLEAAGADP 1073
Query: 1197 EIQRYNTPGFSGCLSGVRFNNVAPLKTHFRTPRP 1230
+ +R T GF+GCLS VRF APLK R P
Sbjct: 1074 DTRRAATSGFTGCLSAVRFGRAAPLKAALRPSGP 1107
Score = 35.8 bits (81), Expect = 0.29
Identities = 41/165 (24%), Positives = 58/165 (35%), Gaps = 27/165 (16%)
Query: 852 FDVGNGDENLTVHSDDFEFNDDEWHLVRAEINVKQARLRVDHRPWVLRPMPLQTYIWMEY 911
F G N+T + ND +WH V + VD V PL +
Sbjct: 433 FQAGQSPRNVTAGAG---LNDGQWHSVSFSAKWSHMNVVVDDDTAV---QPLVAVLIDSG 486
Query: 912 DQPLYVG-----SAELKRRP---FVGCLRAMRLNG-------VTLNLEGRANASEGTSPN 956
D + G S + P F GCLR + + V G + S
Sbjct: 487 DTYYFGGCLGNSSGSGCKSPLGGFQGCLRLITIGDKAVDPILVQQGALGSFRDLQIDSCG 546
Query: 957 CTGHCAHPRLP--CFHGGRCVERYSYYTCDCDLTAFDGPYCNHDI 999
T C LP C HGG C + + ++CDC T + G C+ +
Sbjct: 547 ITDRC----LPSYCEHGGECSQSWDTFSCDCLGTGYTGETCHSSL 587
Score = 32.0 bits (71), Expect = 4.2
Identities = 35/128 (27%), Positives = 53/128 (41%), Gaps = 8/128 (6%)
Query: 1084 VSFSFSTSSAPAVLLYVSSFVRDYMAVLIKDDGTLQLR-YQLGTSPYVYQLTTRPVTDGQ 1142
V+F F T + LL+ VL DG L+L +Q G SP + DGQ
Sbjct: 394 VTFQFRTWNRAGHLLFGELQRGSGSFVLFLKDGKLKLSLFQAGQSPRNVTAGAG-LNDGQ 452
Query: 1143 PHSINITRVYRNLFIQVDYFPLTEQKFSLLVDSQLDSPKALYLGRVMETGVIDPEIQRYN 1202
HS++ + + ++ + VD + ++L+DS LG +G P
Sbjct: 453 WHSVSFSAKWSHMNVVVDDDTAVQPLVAVLIDSGDTYYFGGCLGNSSGSGCKSP------ 506
Query: 1203 TPGFSGCL 1210
GF GCL
Sbjct: 507 LGGFQGCL 514
>gi|239743797 PREDICTED: similar to cell recognition molecule CASPR3
[Homo sapiens]
Length = 944
Score = 344 bits (882), Expect = 4e-94
Identities = 184/512 (35%), Positives = 286/512 (55%), Gaps = 56/512 (10%)
Query: 688 GYPYSFWIGRNEEQHFYWGGSQPGIQRCACGLDRSCVDPALYCNCDADQPQWRTDKGLLT 747
G P S+W+GR E H WGGS P Q+C CGL+ +C+D YCNCDA + +W +D +L+
Sbjct: 428 GTPLSWWVGRTNETHTSWGGSLPDAQKCTCGLEGNCIDSQYYCNCDAGRNEWTSDTIVLS 487
Query: 748 FVDHLPVTQVVIGDTNRSTSEAQFFLRPLRCYGDRNSWNTISFHTGAA-LRFPPIRANHS 806
+HLPVTQ+V+ D + SEA + L PL C GD++ WN+ SF+T + L FP +
Sbjct: 488 QKEHLPVTQIVMTDAGQPHSEADYTLGPLLCRGDKSFWNSASFNTETSYLHFPAFHGELT 547
Query: 807 LDVSFYFRTSAPSGVFLENMGGPYCQWRRPYVRVELNTSRDVVFAFDVGNGDENLTVHSD 866
DV F+F+T+ SGVF+EN+G ++R+EL +V F+FDVGNG +TV S
Sbjct: 548 ADVCFFFKTTVSSGVFMENLG------ITDFIRIELRAPTEVTFSFDVGNGPCEVTVQSP 601
Query: 867 DFEFNDDEWHLVRAEINVKQARLRVDHRPWVLRPMPLQTYIWMEYDQPLYVGSAELKRRP 926
FND++WH VRAE NVK A L+VD P ++P P ++ ++ + L++G ++R
Sbjct: 602 T-PFNDNQWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFIGGTATRQRG 660
Query: 927 FVGCLRAMRLNGVTLNLEGRANASEGTSPNCTGHCAHPRLPCFHGGRCVERYSYYTCDCD 986
F+GC+R+++LNGV L+LE RA G P C GHC+ C +GGRC E+ TCDC
Sbjct: 661 FLGCIRSLQLNGVALDLEERATVMPGVEPGCAGHCSTYGHLCRNGGRCREKRRGVTCDCA 720
Query: 987 LTAFDGPYCNHDIGGFFEPGTWMRYNLQSALRSAAREFSHMLSRPVPGYEPGYIPGYDTP 1046
+A+DGP+C+++I +F G+ M Y+ Q Y ++
Sbjct: 721 FSAYDGPFCSNEISAYFATGSSMTYHFQE----------------------HYTLSENSS 758
Query: 1047 GYVPGYHGPGYRLPDYPRPGRPVPGYRGPVYNVTGEEVSFSFSTSSAPAVLLYVSSFVRD 1106
V H R V +T E ++ SF T+ P++LLYVSSF +
Sbjct: 759 SLVSSLH-------------RDV--------TLTREMITLSFRTTRTPSLLLYVSSFYEE 797
Query: 1107 YMAVLIKDDGTLQLRYQLG--TSPYVYQLTTRPVTDGQPHSINITRVYRNLFIQVDYFPL 1164
Y++V++ ++G+LQ+RY+L +P + + + DGQ H + I R + V+
Sbjct: 798 YLSVILANNGSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVKINR--EEAVVMVEVNQS 855
Query: 1165 TEQKFSLLVDSQLDSPKALYLGRVM-ETGVID 1195
+++ L ++ ++ K+L LG+V+ +G +D
Sbjct: 856 AKKQVILSSGTEFNAVKSLILGKVLGRSGPVD 887
Score = 142 bits (359), Expect = 2e-33
Identities = 65/136 (47%), Positives = 87/136 (63%)
Query: 487 CPKPASRWDCHSNQTAFHGCMELLKVDGQLVNLTLVEGRRLGFYAEVLFDTCGITDRCSP 546
C +S C S F GC+ L+ + + V+ LV+ LG + ++ D+CGITDRC P
Sbjct: 187 CLGNSSGSGCKSPLGGFQGCLRLITIGDKAVDPILVQQGALGSFRDLQIDSCGITDRCLP 246
Query: 547 NMCEHDGRCYQSWDDFICYCELTGYKGETCHTPLYKESCEAYRLSGKTSGNFTIDPDGSG 606
+ CEH G C QSWD F C C TGY GETCH+ LY++SCEA++ G SG + ID DGSG
Sbjct: 247 SYCEHGGECSQSWDTFSCDCLGTGYTGETCHSSLYEQSCEAHKHRGNPSGLYYIDADGSG 306
Query: 607 PLKPFVVYCDIRENRA 622
PL PF+VYC++ + A
Sbjct: 307 PLGPFLVYCNMTDRSA 322
Score = 46.2 bits (108), Expect = 2e-04
Identities = 36/135 (26%), Positives = 58/135 (42%), Gaps = 16/135 (11%)
Query: 201 FSFKTEEKDGLLLHAEGAQGDYVTLELEG-AHLLLHMSLGSSPIQPRPGHTTVSAGGVLN 259
F FKT G+ + G D++ +EL + +G+ P + TV + N
Sbjct: 552 FFFKTTVSSGVFMENLGIT-DFIRIELRAPTEVTFSFDVGNGPCE-----VTVQSPTPFN 605
Query: 260 DQHWHYVRVDRFGRDVNFTLDGYVQRF--ILNGDFERLNLDTEMFIGGLVGAARKNLAYR 317
D WH+VR +R + + +D Q+ RL L++++FIGG R
Sbjct: 606 DNQWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFIGGTATRQR------ 659
Query: 318 HNFRGCIENVIFNRV 332
F GCI ++ N V
Sbjct: 660 -GFLGCIRSLQLNGV 673
Score = 35.4 bits (80), Expect = 0.38
Identities = 46/222 (20%), Positives = 80/222 (36%), Gaps = 30/222 (13%)
Query: 364 NFGGPHNFVQVPGFPRRGRLAVSFRFRTWDLTGLLLFSRLGDGLGHVELTLSEGQVNVSI 423
+F +++ P F V F F+T +G+ + + LG + E + +
Sbjct: 529 SFNTETSYLHFPAFHGELTADVCFFFKTTVSSGVFM-----ENLGITDFIRIELRAPTEV 583
Query: 424 AQS-----GRKKLQFAAGYRLNDGFWHEVNFVAQENHAVISIDDV--EGAEVRVSYPLLI 476
S G ++ + ND WH V A + +D + + + +
Sbjct: 584 TFSFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRL 643
Query: 477 RTGTSYFFGGCPKPASRWDCHSNQTAFHGCMELLKVDGQLVNLTLVEGRRLGFYAEVLFD 536
+ + F GG + Q F GC+ L+++G V L L E + E
Sbjct: 644 QLNSQLFIGGTA---------TRQRGFLGCIRSLQLNG--VALDLEERATVMPGVEP--- 689
Query: 537 TCGITDRCSP--NMCEHDGRCYQSWDDFICYCELTGYKGETC 576
G CS ++C + GRC + C C + Y G C
Sbjct: 690 --GCAGHCSTYGHLCRNGGRCREKRRGVTCDCAFSAYDGPFC 729
Score = 33.5 bits (75), Expect = 1.5
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 968 CFHGGRCVERYSYYTCDCDLTAFDGPYCNHDI 999
C HGG C + + ++CDC T + G C+ +
Sbjct: 249 CEHGGECSQSWDTFSCDCLGTGYTGETCHSSL 280
Score = 32.7 bits (73), Expect = 2.5
Identities = 31/138 (22%), Positives = 55/138 (39%), Gaps = 13/138 (9%)
Query: 1083 EVSFSFSTSSAPAVLLYVSSFVRDYMAVLIKDDGTLQLRYQLGTSPY-VYQLTTRPVTDG 1141
+V F F T+ + V + + + D++ + ++ + + +G P V + P D
Sbjct: 549 DVCFFFKTTVSSGVFME-NLGITDFIRIELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDN 607
Query: 1142 QPHSINITRVYRNLFIQVDYFPLTEQKFSLLVDSQLDSPKALYLGRVMETGVIDPEIQRY 1201
Q H + R + +QVD P Q +L L++G QR
Sbjct: 608 QWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFIGGTATR-------QR- 659
Query: 1202 NTPGFSGCLSGVRFNNVA 1219
GF GC+ ++ N VA
Sbjct: 660 ---GFLGCIRSLQLNGVA 674
>gi|239743729 PREDICTED: similar to contactin associated
protein-like 3B [Homo sapiens]
Length = 380
Score = 246 bits (628), Expect = 1e-64
Identities = 121/324 (37%), Positives = 188/324 (58%), Gaps = 3/324 (0%)
Query: 25 CDEELVGPLYARSLGASSYYSLLTAPRFARLH---GISGWSPRIGDPNPWLQIDLMKKHR 81
CD L L S +SS S P F+RL+ G GW+P + + WLQIDL ++
Sbjct: 31 CDAPLASALPRSSFSSSSELSSSHGPGFSRLNRRDGAGGWTPLVSNKYQWLQIDLGERME 90
Query: 82 IRAVATQGSFNSWDWVTRYMLLYGDRVDSWTPFYQRGHNSTFFGNVNESAVVRHDLHFHF 141
+ AVATQG + S DWVT Y+L++ D +W + + F GN N +VV + L F
Sbjct: 91 VTAVATQGGYGSSDWVTSYLLMFSDGGRNWKQYRREESIWGFPGNTNADSVVHYRLQPPF 150
Query: 142 TARYIRIVPLAWNPRGKIGLRLGLYGCPYKADILYFDGDDAISYRFPRGVSRSLWDVFAF 201
AR++R +PLAWNPRG+IG+R+ +YGC YK++++YFDG A+ Y + + + DV +
Sbjct: 151 EARFLRFLPLAWNPRGRIGMRIEVYGCAYKSEVVYFDGQSALLYTLDKKPLKPIRDVISL 210
Query: 202 SFKTEEKDGLLLHAEGAQGDYVTLELEGAHLLLHMSLGSSPIQPRPGHTTVSAGGVLNDQ 261
FK + +G+LLH EG G+++TLEL L+ ++ G++ + T++ G +L+DQ
Sbjct: 211 KFKAMQSNGILLHREGQHGNHITLELIKRKLVFFLNSGNAKLPSTIAPVTLTLGSLLDDQ 270
Query: 262 HWHYVRVDRFGRDVNFTLDGYVQRFILNGDFERLNLDTEMFIGGLVGAARKNLAYRHNFR 321
HWH V ++ VNFT+D + F GD L+L+ E+ GG+ R R +F
Sbjct: 271 HWHSVLIELLHTQVNFTVDKHTHHFQAKGDSSNLDLNFEISFGGIPTPGRSRAFTRKSFH 330
Query: 322 GCIENVIFNRVNIADLAVRRHSRI 345
GC+EN+ +N V++ +LA + +I
Sbjct: 331 GCLENLYYNGVDVTELAKKHKPQI 354
Score = 33.1 bits (74), Expect = 1.9
Identities = 35/140 (25%), Positives = 51/140 (36%), Gaps = 11/140 (7%)
Query: 382 RLAVSFRFRTWDLTGLLLFSRLGDGLGHVELTLSEGQVNVSIAQSGRKKLQ-------FA 434
R +S +F+ G+LL R G H+ L L + ++ V SG KL
Sbjct: 205 RDVISLKFKAMQSNGILLH-REGQHGNHITLELIKRKL-VFFLNSGNAKLPSTIAPVTLT 262
Query: 435 AGYRLNDGFWHEVNFVAQENHAVISIDDVEGAEVRVSYPLLIRTGTSYFFGGCPKPASRW 494
G L+D WH V ++D + FGG P P
Sbjct: 263 LGSLLDDQHWHSVLIELLHTQVNFTVDKHTHHFQAKGDSSNLDLNFEISFGGIPTPGR-- 320
Query: 495 DCHSNQTAFHGCMELLKVDG 514
+ +FHGC+E L +G
Sbjct: 321 SRAFTRKSFHGCLENLYYNG 340
>gi|14149613 neurexin 1 isoform alpha1 precursor [Homo sapiens]
Length = 1477
Score = 134 bits (336), Expect = 8e-31
Identities = 119/451 (26%), Positives = 191/451 (42%), Gaps = 69/451 (15%)
Query: 174 ILYFDGDDAISYRFPRGVSRSLWDVFAFSFKTEEKDGLLLHAEGAQGDYVTLELEGAHLL 233
I F G + Y + +S D SFKT +++GL+LH G DYV L L+ +
Sbjct: 283 IATFKGSEYFCYDLSQNPIQSSSDEITLSFKTLQRNGLMLHT-GKSADYVNLALKNGAVS 341
Query: 234 LHMSLGSSPIQPRPGHTTVSAGGVLNDQHWHYVRVDRFGR--------------DVNFTL 279
L ++LGS + G ND WH V+V R R D T
Sbjct: 342 LVINLGSGAFEA----LVEPVNGKFNDNAWHDVKVTRNLRQHSGIGHAMVTISVDGILTT 397
Query: 280 DGYVQRFILNGDFERLNLDTEMFIGGLVGAAR-KNLAYRHNFRGCIENVIFN----RVNI 334
GY Q D+ L D ++GG A +NF GC++ V++ R+ +
Sbjct: 398 TGYTQE-----DYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKNNDVRLEL 452
Query: 335 ADLAVRRHSRITFEGKVAFRCLDPVP-HPINFGGPHNFVQVPGFPRRGRLAVSFRFRTWD 393
+ LA + ++ G VAF+C + PI F P +F+ +P + + ++SF FRT +
Sbjct: 453 SRLAKQGDPKMKIHGVVAFKCENVATLDPITFETPESFISLPKWNAKKTGSISFDFRTTE 512
Query: 394 LTGLLLFS----RLGDGLGHVE--------LTLSEGQVNVSIAQ-SGRKKLQFAAGYRLN 440
GL+LFS R H + + + +G + + + SG K++ A ++N
Sbjct: 513 PNGLILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGTIKIK-ALLKKVN 571
Query: 441 DGFWHEVNFVAQENHAVISIDDVEGAEVRVSYPLLIRTGTSYFFGGCPK-------PASR 493
DG W+ V+F IS++ + ++ + GG P+ P
Sbjct: 572 DGEWYHVDFQRDGRSGTISVNTLRTPYTAPGESEILDLDDELYLGGLPENKAGLVFPTEV 631
Query: 494 WDCHSNQTAFHGCMELLKVDGQLVNLTLVEGRRLGFYAEVLFDTCGITDRCS-------- 545
W N + GC+ L +DGQ ++ + AEV T G+ CS
Sbjct: 632 WTALLNY-GYVGCIRDLFIDGQSKDIRQM--------AEVQ-STAGVKPSCSKETAKPCL 681
Query: 546 PNMCEHDGRCYQSWDDFICYCELTGYKGETC 576
N C+++G C W+ ++C C TGY G +C
Sbjct: 682 SNPCKNNGMCRDGWNRYVCDCSGTGYLGRSC 712
Score = 107 bits (267), Expect = 8e-23
Identities = 106/425 (24%), Positives = 184/425 (43%), Gaps = 27/425 (6%)
Query: 168 CPYKADILYFDGDDAISYRFPRGVSRSLWDVFAFSFKTEEKDGLLLHAEGAQG-DYVTLE 226
C +A +L +DG + + P + DV + F+++ G+L+ D + LE
Sbjct: 712 CEREATVLSYDGSMFMKIQLPVVMHTEAEDV-SLRFRSQRAYGILMATTSRDSADTLRLE 770
Query: 227 LEGAHLLLHMSLGSSPIQ--PRPGHTTVSAGGVLNDQHWHYVRVDRFGRDVNFTLDGY-V 283
L+ + L ++L I G T+ AG LND WH VRV R G+ + T+D
Sbjct: 771 LDAGRVKLTVNLDCIRINCNSSKGPETLFAGYNLNDNEWHTVRVVRRGKSLKLTVDDQQA 830
Query: 284 QRFILNGDFERL---NLDTEMFIGGLVGAARKNLAYRHNFRGCIENVIFNRVNIADLAVR 340
+ GD RL N++T G++ R + NF G ++++ FN + DL
Sbjct: 831 MTGQMAGDHTRLEFHNIET-----GIITERRYLSSVPSNFIGHLQSLTFNGMAYIDLC-- 883
Query: 341 RHSRITF-EGKVAFRCLDPVPHPINFGGPHNFVQVPGFPRRGRLAVSFRFRTWDLTGLLL 399
++ I + E F + + P+ F ++V + + + F+F+T L GL+L
Sbjct: 884 KNGDIDYCELNARFGFRNIIADPVTFKTKSSYVALATLQAYTSMHLFFQFKTTSLDGLIL 943
Query: 400 FSRLGDGLGHVELTLSEGQVN-VSIAQSGRKKLQFAAGYRLNDGFWHEVNFVAQ-ENHAV 457
++ GDG + + L +G ++ V +G ++ ++ LND WH V N
Sbjct: 944 YNS-GDGNDFIVVELVKGYLHYVFDLGNGANLIKGSSNKPLNDNQWHNVMISRDTSNLHT 1002
Query: 458 ISIDDVEGAEVRVSYPLLIRTGTSYFFGGCPKPASRWD---CHSNQTAFHGCMELLKVDG 514
+ ID ++ L Y GG K + H+ + F GC+ + ++G
Sbjct: 1003 VKIDTKITTQITAGARNLDLKSDLYI-GGVAKETYKSLPKLVHAKE-GFQGCLASVDLNG 1060
Query: 515 QLVNLTLVEGRRLGFYAEVLFDTCGITDRCSPNMCEHDGRCYQSWDDFICYCELTGYKGE 574
+L +L L ++ G + C + C + G C Q WD F C C +T + G
Sbjct: 1061 RLPDLI---SDALFCNGQIERGCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGP 1117
Query: 575 TCHTP 579
C+ P
Sbjct: 1118 LCNDP 1122
Score = 82.0 bits (201), Expect = 4e-15
Identities = 119/527 (22%), Positives = 204/527 (38%), Gaps = 130/527 (24%)
Query: 760 GDTNRSTSEAQFFLRPLRCYGDRNSWNTISFHTGAALRFPPIRANHSLDVSFYFRTSAPS 819
GD + A+F R + D ++ T S + A ++A S+ + F F+T++
Sbjct: 886 GDIDYCELNARFGFRNI--IADPVTFKTKSSYVALAT----LQAYTSMHLFFQFKTTSLD 939
Query: 820 GVFLENMGGPYCQWRRPYVRVELNTSRDVVFAFDVGNGDENLTVHSDDFEFNDDEWHLVR 879
G+ L N G ++ VEL + + FD+GNG NL S + ND++WH V
Sbjct: 940 GLILYNSGDG-----NDFIVVEL-VKGYLHYVFDLGNG-ANLIKGSSNKPLNDNQWHNVM 992
Query: 880 AEINVKQAR-LRVDHRPWVLRPMPLQTYIWMEYDQPLYVGSAELK-----------RRPF 927
+ +++D + + ++ LY+G + + F
Sbjct: 993 ISRDTSNLHTVKIDTKITTQITAGARN---LDLKSDLYIGGVAKETYKSLPKLVHAKEGF 1049
Query: 928 VGCLRAMRLNGVTLNLEGRA--------NASEGTSPNCTGHCAHPRLPCFHGGRCVERYS 979
GCL ++ LNG +L A EG S C C + G C++++
Sbjct: 1050 QGCLASVDLNGRLPDLISDALFCNGQIERGCEGPSTTCQEDS------CSNQGVCLQQWD 1103
Query: 980 YYTCDCDLTAFDGPYCNHDIGGFFEPGTWMRYNLQSALRSAAREFSHMLSRPVPGYEPGY 1039
++CDC +T+F GP CN +PGT +++ S+
Sbjct: 1104 GFSCDCSMTSFSGPLCN-------DPGT-----------------TYIFSK--------- 1130
Query: 1040 IPGYDTPGYVPGYHGPGYRLPDYPRPGRPVPGYRGPVYNVTGEEVSFSFSTSSAPAVLLY 1099
G G +P RP + + ++ FST AVL+
Sbjct: 1131 --------------GGGQITYKWPPNDRP---------STRADRLAIGFSTVQKEAVLVR 1167
Query: 1100 V--SSFVRDYMAVLIKDDGTLQLRYQLGTSPYVYQLTTRPVTDGQPHSINITRVYRNLFI 1157
V SS + DY+ + I G + +++ +GT + + + DG+ H + TR N +
Sbjct: 1168 VDSSSGLGDYLELHI-HQGKIGVKFNVGTDDIAIEESNAIINDGKYHVVRFTRSGGNATL 1226
Query: 1158 QVDYFPLTEQKFSLLVDSQLDSPKALYLGRVMETGVIDPEIQRYNTPGFSGCLSGVRFNN 1217
QVD +P+ E + + + L + T +I + Q F G LSG+ +N
Sbjct: 1227 QVDSWPVIE---------RYPAGRQLTIFNSQATIIIGGKEQ---GQPFQGQLSGLYYNG 1274
Query: 1218 VAPLKTHFRTPRPMTAELAEALRVQGELSESNCGAMPRLVSEVPPEL 1264
+ L M AE + + G + RLV EVP +
Sbjct: 1275 LKVLN--------MAAENDANIAIVGNV---------RLVGEVPSSM 1304
Score = 61.2 bits (147), Expect = 7e-09
Identities = 61/268 (22%), Positives = 118/268 (44%), Gaps = 36/268 (13%)
Query: 788 ISFHTGAA-LRFPPIRANHSLDVSFYFRTSAPSGVFLENMGGPYCQWRRPY---VRVELN 843
I+F T + + P A + +SF FRT+ P+G+ L + G P Q + ++V+
Sbjct: 482 ITFETPESFISLPKWNAKKTGSISFDFRTTEPNGLILFSHGKPRHQKDAKHPQMIKVDFF 541
Query: 844 TSR----DVVFAFDVGNGDENLTVHSDDFEFNDDEWHLVRAEINVKQARLRVD--HRPWV 897
+ D+G+G + + + + ND EW+ V + + + + V+ P+
Sbjct: 542 AIEMLDGHLYLLLDMGSG--TIKIKALLKKVNDGEWYHVDFQRDGRSGTISVNTLRTPYT 599
Query: 898 LRPMPLQTYIWMEYDQPLYVGS---------------AELKRRPFVGCLRAMRLNGVTLN 942
P ++ I ++ D LY+G L +VGC+R + ++G + +
Sbjct: 600 A---PGESEI-LDLDDELYLGGLPENKAGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKD 655
Query: 943 LEGRAN--ASEGTSPNCTGHCAHPRL--PCFHGGRCVERYSYYTCDCDLTAFDGPYCNHD 998
+ A ++ G P+C+ A P L PC + G C + ++ Y CDC T + G C +
Sbjct: 656 IRQMAEVQSTAGVKPSCSKETAKPCLSNPCKNNGMCRDGWNRYVCDCSGTGYLGRSCERE 715
Query: 999 IGGF-FEPGTWMRYNLQSALRSAAREFS 1025
++ +M+ L + + A + S
Sbjct: 716 ATVLSYDGSMFMKIQLPVVMHTEAEDVS 743
Score = 48.1 bits (113), Expect = 6e-05
Identities = 41/193 (21%), Positives = 82/193 (42%), Gaps = 25/193 (12%)
Query: 175 LYFDGDDAISYRFP---RGVSRSLWDVFAFSFKTEEKDGLLLHAEGAQG--DYVTLELEG 229
++ G I+Y++P R +R+ D A F T +K+ +L+ + + G DY+ L +
Sbjct: 1127 IFSKGGGQITYKWPPNDRPSTRA--DRLAIGFSTVQKEAVLVRVDSSSGLGDYLELHIHQ 1184
Query: 230 AHLLLHMSLGSSPIQPRPGHTTVSAGGVLNDQHWHYVRVDRFGRDVNFTLDGY--VQRFI 287
+ + ++G+ I + ++ND +H VR R G + +D + ++R+
Sbjct: 1185 GKIGVKFNVGTDDI------AIEESNAIINDGKYHVVRFTRSGGNATLQVDSWPVIERYP 1238
Query: 288 LNGDFERLNLDTEMFIGGLVGAARKNLAYRHNFRGCIENVIFNRVNIADLAVRRHSRITF 347
N + IGG F+G + + +N + + ++A + I
Sbjct: 1239 AGRQLTIFNSQATIIIGG--------KEQGQPFQGQLSGLYYNGLKVLNMAAENDANIAI 1290
Query: 348 EGKVAFRCLDPVP 360
G V R + VP
Sbjct: 1291 VGNV--RLVGEVP 1301
Score = 46.2 bits (108), Expect = 2e-04
Identities = 101/477 (21%), Positives = 170/477 (35%), Gaps = 87/477 (18%)
Query: 776 LRCYGDRNSWNTISFHTGAALRFPPIRANHSLDVSFYFRTSAPSGVFLENMGGPYCQWRR 835
L C+ + S G RFP A ++SF +T + G+ L +C
Sbjct: 21 LGCWAELGSGLEFPGAEGQWTRFPKWNACCESEMSFQLKTRSARGLVLYFDDEGFCD--- 77
Query: 836 PYVRVELNTSRDVVFAFDVGNGDENLTVHSDDFEFNDDEWHLVRAEINVKQARLRVDH-- 893
++ + L + +F + + + D ND WH VR + L +D
Sbjct: 78 -FLELILTRGGRLQLSFSIFCAEPATLLA--DTPVNDGAWHSVRIRRQFRNTTLFIDQVE 134
Query: 894 RPWV-----LRPMPLQTYIWMEYDQPLYVGSAELK--------RRPFVGCLRAMRLNGVT 940
WV R M + + +++ P + +A LK R PF G +R +R+N
Sbjct: 135 AKWVEVKSKRRDMTVFSGLFVG-GLPPELRAAALKLTLASVREREPFKGWIRDVRVNSSQ 193
Query: 941 L--------NLEGRANASEGTSPNCTGHCAHPRLPCFHGGRCVERYSYYTCDCDLTAFDG 992
+ L+ S G SP G + C +GG C CDC T F G
Sbjct: 194 VLPVDSGEVKLDDEPPNSGGGSPCEAGEEGEGGV-CLNGGVCSVVDDQAVCDCSRTGFRG 252
Query: 993 PYCNHDIGGFFEPGTWMRYNLQSALRSAAREFSHMLSRPVPGYEPGYIPGYDTPGYVPGY 1052
C+ + + +H++ + G G + Y+ +
Sbjct: 253 KDCSQE-------------------DNNVEGLAHLMMG-----DQGKSKGKEE--YIATF 286
Query: 1053 HGPGYRLPDYPRPGRPVPGYRGPVYNVTGEEVSFSFSTSSAPAVLLYVSSFVRDYMAVLI 1112
G Y D + P+ + + +E++ SF T ++L+ DY+ + +
Sbjct: 287 KGSEYFCYDLS---------QNPIQS-SSDEITLSFKTLQRNGLMLHTGKSA-DYVNLAL 335
Query: 1113 KDDGTLQLRYQLGTSPYVYQLTTRPV----TDGQPHSINITRVYRN--------LFIQVD 1160
K +G + L LG+ ++ PV D H + +TR R + I VD
Sbjct: 336 K-NGAVSLVINLGSG--AFEALVEPVNGKFNDNAWHDVKVTRNLRQHSGIGHAMVTISVD 392
Query: 1161 YFPLTEQKFSLLVDSQLDSPKALYLGRVMETGVIDPEIQRYNTPGFSGCLSGVRFNN 1217
LT ++ + L S Y+G T + N F GCL V + N
Sbjct: 393 GI-LTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNN---FMGCLKEVVYKN 445
Score = 42.7 bits (99), Expect = 0.002
Identities = 52/214 (24%), Positives = 78/214 (36%), Gaps = 34/214 (15%)
Query: 385 VSFRFRTWDLTGLLLFSRLGDGLGHVELTLSEG-QVNVSIAQSGRKKLQFAAGYRLNDGF 443
+SF+ +T GL+L+ +EL L+ G ++ +S + + A +NDG
Sbjct: 54 MSFQLKTRSARGLVLYFDDEGFCDFLELILTRGGRLQLSFSIFCAEPATLLADTPVNDGA 113
Query: 444 WHEVNFVAQENHAVISIDDVEGAEVRVSYPLLIRTGTS-YFFGGCP-------------- 488
WH V Q + + ID VE V V T S F GG P
Sbjct: 114 WHSVRIRRQFRNTTLFIDQVEAKWVEVKSKRRDMTVFSGLFVGGLPPELRAAALKLTLAS 173
Query: 489 ----KPASRW--DCHSNQTAFHGCMELLKVDGQLVNLTLVEGRRLGFYAEVLFDTCGITD 542
+P W D N + ++L VD V L G C +
Sbjct: 174 VREREPFKGWIRDVRVNSS------QVLPVDSGEVKLDDEPPNSGG------GSPCEAGE 221
Query: 543 RCSPNMCEHDGRCYQSWDDFICYCELTGYKGETC 576
+C + G C D +C C TG++G+ C
Sbjct: 222 EGEGGVCLNGGVCSVVDDQAVCDCSRTGFRGKDC 255
Score = 34.7 bits (78), Expect = 0.65
Identities = 45/168 (26%), Positives = 73/168 (43%), Gaps = 20/168 (11%)
Query: 175 LYFDGDDAISYRFPRGVSRSLWDVFAFSFKTEEKDGLLLHAEGAQGDYVTLEL---EGAH 231
L F G + RFP+ + +F KT GL+L+ + +G LEL G
Sbjct: 31 LEFPGAEGQWTRFPKW-NACCESEMSFQLKTRSARGLVLYFDD-EGFCDFLELILTRGGR 88
Query: 232 LLLHMSLGSSPIQPRPGHTTVSAGGVLNDQHWHYVRVDRFGRDVNFTLDGYVQRFI-LNG 290
L L S+ + +P T+ A +ND WH VR+ R R+ +D +++ +
Sbjct: 89 LQLSFSIFCA--EP----ATLLADTPVNDGAWHSVRIRRQFRNTTLFIDQVEAKWVEVKS 142
Query: 291 DFERLNLDTEMFIGGL-----VGAARKNLA---YRHNFRGCIENVIFN 330
+ + + +F+GGL A + LA R F+G I +V N
Sbjct: 143 KRRDMTVFSGLFVGGLPPELRAAALKLTLASVREREPFKGWIRDVRVN 190
Score = 32.7 bits (73), Expect = 2.5
Identities = 26/101 (25%), Positives = 41/101 (40%), Gaps = 7/101 (6%)
Query: 796 LRFPPIRANHSLDVSFYFRTSAPSGVFLENMGGPYCQWRRPYV---RVELNTSRDVV-FA 851
++ P + + DVS FR+ G+ + R + RV+L + D +
Sbjct: 729 IQLPVVMHTEAEDVSLRFRSQRAYGILMATTSRDSADTLRLELDAGRVKLTVNLDCIRIN 788
Query: 852 FDVGNGDENLTVHSDDFEFNDDEWHLVRAEINVKQARLRVD 892
+ G E L + ND+EWH VR K +L VD
Sbjct: 789 CNSSKGPETLFA---GYNLNDNEWHTVRVVRRGKSLKLTVD 826
Score = 31.2 bits (69), Expect = 7.2
Identities = 40/169 (23%), Positives = 70/169 (41%), Gaps = 25/169 (14%)
Query: 800 PIRANHSLDVSFYFRTSAPSGVFLENMGGPYCQWRRPYVRVELNTSRDVVFAFDVGNGDE 859
PI+++ S +++ F+T +G+ L YV + L V ++G+G
Sbjct: 300 PIQSS-SDEITLSFKTLQRNGLMLHTGKSA------DYVNLALKNGA-VSLVINLGSGAF 351
Query: 860 NLTVHSDDFEFNDDEWHLVRAEINVKQARLRVDHRPWVLRPMPLQT--------YIWMEY 911
V + +FND+ WH V+ N++Q + H + + T Y +
Sbjct: 352 EALVEPVNGKFNDNAWHDVKVTRNLRQ-HSGIGHAMVTISVDGILTTTGYTQEDYTMLGS 410
Query: 912 DQPLYVG----SAELKRRP----FVGCLRAMRLNGVTLNLEGRANASEG 952
D YVG +A+L P F+GCL+ + + LE A +G
Sbjct: 411 DDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKNNDVRLELSRLAKQG 459
>gi|21166380 neurexin 2 isoform alpha-2 precursor [Homo sapiens]
Length = 1642
Score = 133 bits (335), Expect = 1e-30
Identities = 118/442 (26%), Positives = 190/442 (42%), Gaps = 56/442 (12%)
Query: 177 FDGDDAISYRFPRGVSRSLWDVFAFSFKTEEKDGLLLHAEGAQGDYVTLELEGAHLLLHM 236
F G++ Y +S D +F+T +++GL+LH G DYV L L+ + L +
Sbjct: 268 FKGNEFFCYDLSHNPIQSSTDEITLAFRTLQRNGLMLHT-GKSADYVNLSLKSGAVWLVI 326
Query: 237 SLGSSPIQPRPGHTTVSAGGVLNDQHWHYVRVDRFGR--------------DVNFTLDGY 282
+LGS + G ND WH VRV R R D T GY
Sbjct: 327 NLGSGAFEA----LVEPVNGKFNDNAWHDVRVTRNLRQHAGIGHAMVTISVDGILTTTGY 382
Query: 283 VQRFILNGDFERLNLDTEMFIGGLVGAAR-KNLAYRHNFRGCIENVIFN----RVNIADL 337
Q D+ L D +IGG A +NF GC+++V++ ++ ++ L
Sbjct: 383 TQE-----DYTMLGSDDFFYIGGSPNTADLPGSPVSNNFMGCLKDVVYKNNDFKLELSRL 437
Query: 338 AVRRHSRITFEGKVAFRCLDPVP-HPINFGGPHNFVQVPGFPRRGRLAVSFRFRTWDLTG 396
A ++ +G ++FRC D P+ F P FV +P + + ++S FRT + G
Sbjct: 438 AKEGDPKMKLQGDLSFRCEDVAALDPVTFESPEAFVALPRWSAKRTGSISLDFRTTEPNG 497
Query: 397 LLLFS---RLGDGLG---------HVELTLSEGQVNVSIAQ-SGRKKLQFAAGYRLNDGF 443
LLLFS R G G G + + L +G + + + SG KL+ A+ ++NDG
Sbjct: 498 LLLFSQGRRAGGGAGSHSSAQRADYFAMELLDGHLYLLLDMGSGGIKLR-ASSRKVNDGE 556
Query: 444 WHEVNFVAQENHAVISIDDVEGAEVRVSYPLLIRTGTSYFFGGCPK--------PASRWD 495
W V+F IS++ + ++ + + GG P+ P W
Sbjct: 557 WCHVDFQRDGRKGSISVNSRSTPFLATGDSEILDLESELYLGGLPEGGRVDLPLPPEVWT 616
Query: 496 CHSNQTAFHGCMELLKVDGQLVNLT-LVEGRRLGFYAEVLFDTCGITDRCSPNMCEHDGR 554
+ + + GC+ L +DG+ +L L E + G F + +C+ C + G
Sbjct: 617 A-ALRAGYVGCVRDLFIDGRSRDLRGLAEAQ--GAVGVAPFCSRETLKQCASAPCRNGGV 673
Query: 555 CYQSWDDFICYCELTGYKGETC 576
C + W+ FIC C TG+ G C
Sbjct: 674 CREGWNRFICDCIGTGFLGRVC 695
Score = 112 bits (279), Expect = 3e-24
Identities = 110/427 (25%), Positives = 183/427 (42%), Gaps = 41/427 (9%)
Query: 168 CPYKADILYFDGDDAISYRFPRGVSRSLWDVFAFSFKTEEKDGLLLHAEGAQG-DYVTLE 226
C +A +L +DG + P + DV + F ++ GL++ + D + LE
Sbjct: 695 CEREATVLSYDGSMYMKIMLPNAMHTEAEDV-SLRFMSQRAYGLMMATTSRESADTLRLE 753
Query: 227 LEGAHLLLHMSLGSSPIQPRPGHTTVSAGGVLNDQHWHYVRVDRFGRDVNFTLDGYVQRF 286
L+G + L ++LG P T+ AG LND WH VRV R G+ + ++D
Sbjct: 754 LDGGQMKLTVNLGKGP-------ETLFAGHKLNDNEWHTVRVVRRGKSLQLSVDNVTVEG 806
Query: 287 ILNGDFERL---NLDTEMFIGGLVGAARKNLAYRHNFRGCIENVIFNRVNIADLAVRRHS 343
+ G RL N++T G++ R NF G + ++FN D +
Sbjct: 807 QMAGAHMRLEFHNIET-----GIMTERRFISVVPSNFIGHLSGLVFNGQPYMDQC--KDG 859
Query: 344 RITF-EGKVAFRCLDPVPHPINFGGPHNFVQVPGFPRRGRLAVSFRFRTWDLTGLLLFSR 402
IT+ E F V P+ F +++ + + + F+F+T GLLLF+
Sbjct: 860 DITYCELNARFGLRAIVADPVTFKSRSSYLALATLQAYASMHLFFQFKTTAPDGLLLFNS 919
Query: 403 LGDGLGHVELTLSEGQVN-VSIAQSGRKKLQFAAGYRLNDGFWHEVNFVAQE--NHAVIS 459
G+G + + L +G ++ V +G ++ + +ND WH V V+++ N +
Sbjct: 920 -GNGNDFIVIELVKGYIHYVFDLGNGPSLMKGNSDKPVNDNQWHNV-VVSRDPGNVHTLK 977
Query: 460 IDD------VEGAE-VRVSYPLLIRTGTSYFFGGCPKPASRWDCHSNQTAFHGCMELLKV 512
ID GA + + L I + F PK + D F GC+ + +
Sbjct: 978 IDSRTVTQHSNGARNLDLKGELYIGGLSKNMFSNLPKLVASRD------GFQGCLASVDL 1031
Query: 513 DGQLVNLTLVEGRRLGFYAEVLFDTCGITDRCSPNMCEHDGRCYQSWDDFICYCELTGYK 572
+G+L +L R+G +V G + C+ C + G C Q WD F C C +T Y
Sbjct: 1032 NGRLPDLIADALHRIG---QVERGCDGPSTTCTEESCANQGVCLQQWDGFTCDCTMTSYG 1088
Query: 573 GETCHTP 579
G C+ P
Sbjct: 1089 GPVCNDP 1095
Score = 89.7 bits (221), Expect = 2e-17
Identities = 116/491 (23%), Positives = 188/491 (38%), Gaps = 124/491 (25%)
Query: 796 LRFPPIRANHSLDVSFYFRTSAPSGVFLENMGGPYCQWRRPYVRVELNTSRDVVFAFDVG 855
L ++A S+ + F F+T+AP G+ L N G ++ +EL + + FD+G
Sbjct: 889 LALATLQAYASMHLFFQFKTTAPDGLLLFNSGNG-----NDFIVIEL-VKGYIHYVFDLG 942
Query: 856 NGDENLTVHSDDFEFNDDEWHLVRAEINVKQAR-LRVDHRPWVLRPMPLQTYIWMEYDQP 914
NG + +SD ND++WH V + L++D R + ++
Sbjct: 943 NGPSLMKGNSDK-PVNDNQWHNVVVSRDPGNVHTLKIDSRTVTQHSNGARN---LDLKGE 998
Query: 915 LYVGSAE-----------LKRRPFVGCLRAMRLNGVTLNLEGRA--------NASEGTSP 955
LY+G R F GCL ++ LNG +L A +G S
Sbjct: 999 LYIGGLSKNMFSNLPKLVASRDGFQGCLASVDLNGRLPDLIADALHRIGQVERGCDGPST 1058
Query: 956 NCTGHCAHPRLPCFHGGRCVERYSYYTCDCDLTAFDGPYCNHDIGGFFEPGTWMRYNLQS 1015
CT C + G C++++ +TCDC +T++ GP CN +PGT +
Sbjct: 1059 TCTEES------CANQGVCLQQWDGFTCDCTMTSYGGPVCN-------DPGTTYIFGKGG 1105
Query: 1016 ALRSAAREFSHMLSRPVPGYEPGYIPGYDTPGYVPGYHGPGYRLPDYPRPGRPVPGYRGP 1075
AL + Y P RP +
Sbjct: 1106 ALIT-------------------------------------YTWPPNDRPSTRM------ 1122
Query: 1076 VYNVTGEEVSFSFSTSSAPAVLLYV--SSFVRDYMAVLIKDDGTLQLRYQLGTSPYVYQL 1133
+ ++ FST AVL+ V +S + DY+ + I D GT+ + + +GT
Sbjct: 1123 ------DRLAVGFSTHQRSAVLVRVDSASGLGDYLQLHI-DQGTVGVIFNVGTDDITIDE 1175
Query: 1134 TTRPVTDGQPHSINITRVYRNLFIQVDYFPLTEQKFSLLVDSQLDSPKALYLGRVMETGV 1193
V+DG+ H + TR N +QVD +P+ E+ + + +S A+ +G
Sbjct: 1176 PNAIVSDGKYHVVRFTRSGGNATLQVDSWPVNERYPAGRQLTIFNSQAAIKIG------- 1228
Query: 1194 IDPEIQRYNTPGFSGCLSGVRFNNVAPLKTHFRTPRPMTAELAEALRVQGELSESNCGAM 1253
R F G +SG+ +N + L + AE +R +G L
Sbjct: 1229 -----GRDQGRPFQGQVSGLYYNGLKVL--------ALAAESDPNVRTEGHL-------- 1267
Query: 1254 PRLVSEVPPEL 1264
RLV E P L
Sbjct: 1268 -RLVGEGPSVL 1277
Score = 79.3 bits (194), Expect = 2e-14
Identities = 160/712 (22%), Positives = 271/712 (38%), Gaps = 109/712 (15%)
Query: 385 VSFRFRTWDLTGLLLFSRLGDGLGHVELTLSEGQVNVSIAQSGRKKLQFAAGYRLNDGFW 444
+SF RT LLL+ G +EL L +G++ + S + + D W
Sbjct: 53 LSFSLRTNATRALLLYLDDGGDCDFLELLLVDGRLRLRFTLSCAEPATLQLDTPVADDRW 112
Query: 445 HEVNFVAQENHAVISID-DVEGAEVRVSYPLLIRTGTSYFFGGCPKPASRWDCHSNQTA- 502
H V +++D + AEVR S ++ + F GG P P R + T
Sbjct: 113 HMVLLTRDARRTALAVDGEARAAEVR-SKRREMQVASDLFVGGIP-PDVRLSALTLSTVK 170
Query: 503 ----FHGCMELLKVDGQLVNLTLVEGRRLGFYAEVLFDTCGITDRCSP--NMCEHDGRC- 555
F G + LK+ + L +G R G A+ L C+P N C + G C
Sbjct: 171 YEPPFRGLLANLKLGERPPALLGSQGLR-GATADPL---------CAPARNPCANGGLCT 220
Query: 556 YQSWDDFICYCELTGYKGETC-----------HTPLYKESCEAYRLSGKTSGNFTID--- 601
+ + C C TG+ G+ C H L E E + + K + F D
Sbjct: 221 VLAPGEVGCDCSHTGFGGKFCSEEEHPMEGPAHLTLNSEGKEEFVATFKGNEFFCYDLSH 280
Query: 602 -PDGSGPLKPFVVYCDIRENRAWT-----------VVRHDRLWTTRVTGSSMERPFLGAI 649
P S + + + ++ N ++ +W GS + +
Sbjct: 281 NPIQSSTDEITLAFRTLQRNGLMLHTGKSADYVNLSLKSGAVWLVINLGSGAFEALVEPV 340
Query: 650 --QYWNASWEEVSALANASQHCEQWIEFSCYNSRLLNTAGGYPYSFWIGRNEEQHFYWGG 707
++ + +W +V N QH + + T GY + + FY GG
Sbjct: 341 NGKFNDNAWHDVRVTRNLRQHAGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYIGG 400
Query: 708 SQPGIQRCACGLDRS---CVDPALYCNCDADQPQWRTDKGLLTFVDHLPVTQVVIGDTNR 764
S + + C+ +Y N D R K GD
Sbjct: 401 SPNTADLPGSPVSNNFMGCLKDVVYKNNDFKLELSRLAKE---------------GDPKM 445
Query: 765 STSEAQFFLRPLRCYGDRNSWNTISFHTGAA-LRFPPIRANHSLDVSFYFRTSAPSGVFL 823
F RC D + + ++F + A + P A + +S FRT+ P+G+ L
Sbjct: 446 KLQGDLSF----RCE-DVAALDPVTFESPEAFVALPRWSAKRTGSISLDFRTTEPNGLLL 500
Query: 824 ENMG-------GPYCQWRRP-YVRVELNTSRDVVFAFDVGNGDENLTVHSDDFEFNDDEW 875
+ G G + +R Y +EL + D+G+G L S + ND EW
Sbjct: 501 FSQGRRAGGGAGSHSSAQRADYFAMELLDGH-LYLLLDMGSGGIKLRASSR--KVNDGEW 557
Query: 876 HLVRAEINVKQARLRVDHR--PWVLRP----MPLQTYIWM-------EYDQPL--YVGSA 920
V + + ++ + V+ R P++ + L++ +++ D PL V +A
Sbjct: 558 CHVDFQRDGRKGSISVNSRSTPFLATGDSEILDLESELYLGGLPEGGRVDLPLPPEVWTA 617
Query: 921 ELKRRPFVGCLRAMRLNGVTLNLEGRANA--SEGTSPNCTGH----CAHPRLPCFHGGRC 974
L R +VGC+R + ++G + +L G A A + G +P C+ CA PC +GG C
Sbjct: 618 AL-RAGYVGCVRDLFIDGRSRDLRGLAEAQGAVGVAPFCSRETLKQCASA--PCRNGGVC 674
Query: 975 VERYSYYTCDCDLTAFDGPYCNHDIGGF-FEPGTWMRYNLQSALRSAAREFS 1025
E ++ + CDC T F G C + ++ +M+ L +A+ + A + S
Sbjct: 675 REGWNRFICDCIGTGFLGRVCEREATVLSYDGSMYMKIMLPNAMHTEAEDVS 726
Score = 48.5 bits (114), Expect = 4e-05
Identities = 89/410 (21%), Positives = 142/410 (34%), Gaps = 82/410 (20%)
Query: 153 WNPRGKIGLRLGLYGCPYKADILYFDGDDAISYRFPRGVSRSLWDVFAFSFKTEEKDGLL 212
W P L L L +AD L F G R+ R + +FS +T LL
Sbjct: 7 WRPTPPPLLLLLLLALAARADGLEFGGGPGQWARYARWAGAASSGELSFSLRTNATRALL 66
Query: 213 LHAE-GAQGDYVTLELEGAHLLLHMSLGSSPIQPRPGHTTVSAGGVLNDQHWHYVRVDRF 271
L+ + G D++ L L L L +L + +P T+ + D WH V + R
Sbjct: 67 LYLDDGGDCDFLELLLVDGRLRLRFTLSCA--EP----ATLQLDTPVADDRWHMVLLTRD 120
Query: 272 GRDVNFTLDGYVQRFILNGDFERLNLDTEMFIGGLVGAAR------KNLAYRHNFRGCIE 325
R +DG + + + + +++F+GG+ R + Y FRG +
Sbjct: 121 ARRTALAVDGEARAAEVRSKRREMQVASDLFVGGIPPDVRLSALTLSTVKYEPPFRGLLA 180
Query: 326 NVIFN------------RVNIAD--LAVRRH--------------------SRITFEGKV 351
N+ R AD A R+ S F GK
Sbjct: 181 NLKLGERPPALLGSQGLRGATADPLCAPARNPCANGGLCTVLAPGEVGCDCSHTGFGGKF 240
Query: 352 AFRCLDPVPHP----INFGGPHNFVQV--------------PGFPRRGRLAVSFRFRTWD 393
P+ P +N G FV P + ++FR T
Sbjct: 241 CSEEEHPMEGPAHLTLNSEGKEEFVATFKGNEFFCYDLSHNPIQSSTDEITLAFR--TLQ 298
Query: 394 LTGLLLFSRLGDGLGHVELTLSEGQV--NVSIAQSGRKKLQFAAGYRLNDGFWHEVNFV- 450
GL+L + G +V L+L G V +++ + L + ND WH+V
Sbjct: 299 RNGLMLHT--GKSADYVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFNDNAWHDVRVTR 356
Query: 451 -----AQENHAVISIDDVEGAEVRVSYP----LLIRTGTSYFFGGCPKPA 491
A HA+++I V+G Y ++ + ++ GG P A
Sbjct: 357 NLRQHAGIGHAMVTI-SVDGILTTTGYTQEDYTMLGSDDFFYIGGSPNTA 405
Score = 40.4 bits (93), Expect = 0.012
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 1083 EVSFSFSTSSAPAVLLYVSSFVRDYMAVLIKDDGTLQLRYQLG-TSPYVYQLTTRPVTDG 1141
E+SFS T++ A+LLY+ L+ DG L+LR+ L P QL T PV D
Sbjct: 52 ELSFSLRTNATRALLLYLDDGGDCDFLELLLVDGRLRLRFTLSCAEPATLQLDT-PVADD 110
Query: 1142 QPHSINITRVYRNLFIQVD 1160
+ H + +TR R + VD
Sbjct: 111 RWHMVLLTRDARRTALAVD 129
>gi|208609951 neurexin 1 isoform alpha2 precursor [Homo sapiens]
Length = 1547
Score = 131 bits (329), Expect = 5e-30
Identities = 119/458 (25%), Positives = 191/458 (41%), Gaps = 76/458 (16%)
Query: 174 ILYFDGDDAISYRFPRGVSRSLWDVFAFSFKTEEKDGLLLHAEGAQGDYVTLELEGAHLL 233
I F G + Y + +S D SFKT +++GL+LH G DYV L L+ +
Sbjct: 316 IATFKGSEYFCYDLSQNPIQSSSDEITLSFKTLQRNGLMLHT-GKSADYVNLALKNGAVS 374
Query: 234 LHMSLGSSPIQPRPGHTTVSAGGVLNDQHWHYVRVDRFGR-------------------- 273
L ++LGS + G ND WH V+V R R
Sbjct: 375 LVINLGSGAFEA----LVEPVNGKFNDNAWHDVKVTRNLRQHSGIGHAMVNKLHCSVTIS 430
Query: 274 -DVNFTLDGYVQRFILNGDFERLNLDTEMFIGGLVGAAR-KNLAYRHNFRGCIENVIFN- 330
D T GY Q D+ L D ++GG A +NF GC++ V++
Sbjct: 431 VDGILTTTGYTQE-----DYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKN 485
Query: 331 ---RVNIADLAVRRHSRITFEGKVAFRCLDPVP-HPINFGGPHNFVQVPGFPRRGRLAVS 386
R+ ++ LA + ++ G VAF+C + PI F P +F+ +P + + ++S
Sbjct: 486 NDVRLELSRLAKQGDPKMKIHGVVAFKCENVATLDPITFETPESFISLPKWNAKKTGSIS 545
Query: 387 FRFRTWDLTGLLLFS----RLGDGLGHVE--------LTLSEGQVNVSIAQ-SGRKKLQF 433
F FRT + GL+LFS R H + + + +G + + + SG K++
Sbjct: 546 FDFRTTEPNGLILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGTIKIK- 604
Query: 434 AAGYRLNDGFWHEVNFVAQENHAVISIDDVEGAEVRVSYPLLIRTGTSYFFGGCPK---- 489
A ++NDG W+ V+F IS++ + ++ + GG P+
Sbjct: 605 ALLKKVNDGEWYHVDFQRDGRSGTISVNTLRTPYTAPGESEILDLDDELYLGGLPENKAG 664
Query: 490 ---PASRWDCHSNQTAFHGCMELLKVDGQLVNLTLVEGRRLGFYAEVLFDTCGITDRCS- 545
P W N + GC+ L +DGQ ++ + AEV T G+ CS
Sbjct: 665 LVFPTEVWTALLNY-GYVGCIRDLFIDGQSKDIRQM--------AEVQ-STAGVKPSCSK 714
Query: 546 -------PNMCEHDGRCYQSWDDFICYCELTGYKGETC 576
N C+++G C W+ ++C C TGY G +C
Sbjct: 715 ETAKPCLSNPCKNNGMCRDGWNRYVCDCSGTGYLGRSC 752
Score = 107 bits (267), Expect = 8e-23
Identities = 106/425 (24%), Positives = 184/425 (43%), Gaps = 27/425 (6%)
Query: 168 CPYKADILYFDGDDAISYRFPRGVSRSLWDVFAFSFKTEEKDGLLLHAEGAQG-DYVTLE 226
C +A +L +DG + + P + DV + F+++ G+L+ D + LE
Sbjct: 752 CEREATVLSYDGSMFMKIQLPVVMHTEAEDV-SLRFRSQRAYGILMATTSRDSADTLRLE 810
Query: 227 LEGAHLLLHMSLGSSPIQ--PRPGHTTVSAGGVLNDQHWHYVRVDRFGRDVNFTLDGY-V 283
L+ + L ++L I G T+ AG LND WH VRV R G+ + T+D
Sbjct: 811 LDAGRVKLTVNLDCIRINCNSSKGPETLFAGYNLNDNEWHTVRVVRRGKSLKLTVDDQQA 870
Query: 284 QRFILNGDFERL---NLDTEMFIGGLVGAARKNLAYRHNFRGCIENVIFNRVNIADLAVR 340
+ GD RL N++T G++ R + NF G ++++ FN + DL
Sbjct: 871 MTGQMAGDHTRLEFHNIET-----GIITERRYLSSVPSNFIGHLQSLTFNGMAYIDLC-- 923
Query: 341 RHSRITF-EGKVAFRCLDPVPHPINFGGPHNFVQVPGFPRRGRLAVSFRFRTWDLTGLLL 399
++ I + E F + + P+ F ++V + + + F+F+T L GL+L
Sbjct: 924 KNGDIDYCELNARFGFRNIIADPVTFKTKSSYVALATLQAYTSMHLFFQFKTTSLDGLIL 983
Query: 400 FSRLGDGLGHVELTLSEGQVN-VSIAQSGRKKLQFAAGYRLNDGFWHEVNFVAQ-ENHAV 457
++ GDG + + L +G ++ V +G ++ ++ LND WH V N
Sbjct: 984 YNS-GDGNDFIVVELVKGYLHYVFDLGNGANLIKGSSNKPLNDNQWHNVMISRDTSNLHT 1042
Query: 458 ISIDDVEGAEVRVSYPLLIRTGTSYFFGGCPKPASRWD---CHSNQTAFHGCMELLKVDG 514
+ ID ++ L Y GG K + H+ + F GC+ + ++G
Sbjct: 1043 VKIDTKITTQITAGARNLDLKSDLYI-GGVAKETYKSLPKLVHAKE-GFQGCLASVDLNG 1100
Query: 515 QLVNLTLVEGRRLGFYAEVLFDTCGITDRCSPNMCEHDGRCYQSWDDFICYCELTGYKGE 574
+L +L L ++ G + C + C + G C Q WD F C C +T + G
Sbjct: 1101 RLPDLI---SDALFCNGQIERGCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGP 1157
Query: 575 TCHTP 579
C+ P
Sbjct: 1158 LCNDP 1162
Score = 84.3 bits (207), Expect = 7e-16
Identities = 123/545 (22%), Positives = 216/545 (39%), Gaps = 136/545 (24%)
Query: 760 GDTNRSTSEAQFFLRPLRCYGDRNSWNTISFHTGAALRFPPIRANHSLDVSFYFRTSAPS 819
GD + A+F R + D ++ T S + A ++A S+ + F F+T++
Sbjct: 926 GDIDYCELNARFGFRNI--IADPVTFKTKSSYVALAT----LQAYTSMHLFFQFKTTSLD 979
Query: 820 GVFLENMGGPYCQWRRPYVRVELNTSRDVVFAFDVGNGDENLTVHSDDFEFNDDEWHLVR 879
G+ L N G ++ VEL + + FD+GNG NL S + ND++WH V
Sbjct: 980 GLILYNSGDG-----NDFIVVEL-VKGYLHYVFDLGNG-ANLIKGSSNKPLNDNQWHNVM 1032
Query: 880 AEINVKQAR-LRVDHRPWVLRPMPLQTYIWMEYDQPLYVGSAELK-----------RRPF 927
+ +++D + + ++ LY+G + + F
Sbjct: 1033 ISRDTSNLHTVKIDTKITTQITAGARN---LDLKSDLYIGGVAKETYKSLPKLVHAKEGF 1089
Query: 928 VGCLRAMRLNGVTLNLEGRA--------NASEGTSPNCTGHCAHPRLPCFHGGRCVERYS 979
GCL ++ LNG +L A EG S C C + G C++++
Sbjct: 1090 QGCLASVDLNGRLPDLISDALFCNGQIERGCEGPSTTCQEDS------CSNQGVCLQQWD 1143
Query: 980 YYTCDCDLTAFDGPYCNHDIGGFFEPGTWMRYNLQSALRSAAREFSHMLSRPVPGYEPGY 1039
++CDC +T+F GP CN +PGT +++ S+
Sbjct: 1144 GFSCDCSMTSFSGPLCN-------DPGT-----------------TYIFSK--------- 1170
Query: 1040 IPGYDTPGYVPGYHGPGYRLPDYPRPGRPVPGYRGPVYNVTGEEVSFSFSTSSAPAVLLY 1099
G G +P RP + + ++ FST AVL+
Sbjct: 1171 --------------GGGQITYKWPPNDRP---------STRADRLAIGFSTVQKEAVLVR 1207
Query: 1100 V--SSFVRDYMAVLIKDDGTLQLRYQLGTSPYVYQLTTRPVTDGQPHSINITRVYRNLFI 1157
V SS + DY+ + I G + +++ +GT + + + DG+ H + TR N +
Sbjct: 1208 VDSSSGLGDYLELHI-HQGKIGVKFNVGTDDIAIEESNAIINDGKYHVVRFTRSGGNATL 1266
Query: 1158 QVDYFPLTEQKFSLLVDSQ---LDSPKALY-LGRVMETGVIDP--EIQRYNTPG------ 1205
QVD +P+ E+ + D++ + + Y LGRV++ ++D ++ +N+
Sbjct: 1267 QVDSWPVIERYPAGNNDNERLAIARQRIPYRLGRVVDEWLLDKGRQLTIFNSQATIIIGG 1326
Query: 1206 ------FSGCLSGVRFNNVAPLKTHFRTPRPMTAELAEALRVQGELSESNCGAMPRLVSE 1259
F G LSG+ +N + L M AE + + G + RLV E
Sbjct: 1327 KEQGQPFQGQLSGLYYNGLKVLN--------MAAENDANIAIVGNV---------RLVGE 1369
Query: 1260 VPPEL 1264
VP +
Sbjct: 1370 VPSSM 1374
Score = 61.2 bits (147), Expect = 7e-09
Identities = 61/268 (22%), Positives = 118/268 (44%), Gaps = 36/268 (13%)
Query: 788 ISFHTGAA-LRFPPIRANHSLDVSFYFRTSAPSGVFLENMGGPYCQWRRPY---VRVELN 843
I+F T + + P A + +SF FRT+ P+G+ L + G P Q + ++V+
Sbjct: 522 ITFETPESFISLPKWNAKKTGSISFDFRTTEPNGLILFSHGKPRHQKDAKHPQMIKVDFF 581
Query: 844 TSR----DVVFAFDVGNGDENLTVHSDDFEFNDDEWHLVRAEINVKQARLRVD--HRPWV 897
+ D+G+G + + + + ND EW+ V + + + + V+ P+
Sbjct: 582 AIEMLDGHLYLLLDMGSG--TIKIKALLKKVNDGEWYHVDFQRDGRSGTISVNTLRTPYT 639
Query: 898 LRPMPLQTYIWMEYDQPLYVGS---------------AELKRRPFVGCLRAMRLNGVTLN 942
P ++ I ++ D LY+G L +VGC+R + ++G + +
Sbjct: 640 A---PGESEI-LDLDDELYLGGLPENKAGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKD 695
Query: 943 LEGRAN--ASEGTSPNCTGHCAHPRL--PCFHGGRCVERYSYYTCDCDLTAFDGPYCNHD 998
+ A ++ G P+C+ A P L PC + G C + ++ Y CDC T + G C +
Sbjct: 696 IRQMAEVQSTAGVKPSCSKETAKPCLSNPCKNNGMCRDGWNRYVCDCSGTGYLGRSCERE 755
Query: 999 IGGF-FEPGTWMRYNLQSALRSAAREFS 1025
++ +M+ L + + A + S
Sbjct: 756 ATVLSYDGSMFMKIQLPVVMHTEAEDVS 783
Score = 46.2 bits (108), Expect = 2e-04
Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Query: 1065 PGRPVPGYRGPVYNVTGE-EVSFSFSTSSAPAVLLYVSSF-VRDYMAVLIKDDGTLQLRY 1122
PG R P +N E E+SF T SA ++LY D++ +++ G LQL +
Sbjct: 34 PGAEGQWTRFPKWNACCESEMSFQLKTRSARGLVLYFDDEGFCDFLELILTRGGRLQLSF 93
Query: 1123 QLGTSPYVYQLTTRPVTDGQPHSINITRVYRNLFIQVD 1160
+ + L PV DG HS+ I R +RN + +D
Sbjct: 94 SIFCAEPATLLADTPVNDGAWHSVRIRRQFRNTTLFID 131
Score = 44.3 bits (103), Expect = 8e-04
Identities = 58/247 (23%), Positives = 92/247 (37%), Gaps = 31/247 (12%)
Query: 776 LRCYGDRNSWNTISFHTGAALRFPPIRANHSLDVSFYFRTSAPSGVFLENMGGPYCQWRR 835
L C+ + S G RFP A ++SF +T + G+ L +C
Sbjct: 21 LGCWAELGSGLEFPGAEGQWTRFPKWNACCESEMSFQLKTRSARGLVLYFDDEGFCD--- 77
Query: 836 PYVRVELNTSRDVVFAFDVGNGDENLTVHSDDFEFNDDEWHLVRAEINVKQARLRVDH-- 893
++ + L + +F + + + D ND WH VR + L +D
Sbjct: 78 -FLELILTRGGRLQLSFSIFCAEPATLLA--DTPVNDGAWHSVRIRRQFRNTTLFIDQVE 134
Query: 894 RPWV-----LRPMPLQTYIWMEYDQPLYVGSAELK--------RRPFVGCLRAMRLNGVT 940
WV R M + + +++ P + +A LK R PF G +R +R+N
Sbjct: 135 AKWVEVKSKRRDMTVFSGLFVG-GLPPELRAAALKLTLASVREREPFKGWIRDVRVNSSQ 193
Query: 941 L--------NLEGRANASEGTSPNCTGHCAHPRLPCFHGGRCVERYSYYTCDCDLTAFDG 992
+ L+ S G SP G + C +GG C CDC T F G
Sbjct: 194 VLPVDSGEVKLDDEPPNSGGGSPCEAGEEGEGGV-CLNGGVCSVVDDQAVCDCSRTGFRG 252
Query: 993 PYCNHDI 999
C+ +I
Sbjct: 253 KDCSQEI 259
Score = 42.7 bits (99), Expect = 0.002
Identities = 52/214 (24%), Positives = 78/214 (36%), Gaps = 34/214 (15%)
Query: 385 VSFRFRTWDLTGLLLFSRLGDGLGHVELTLSEG-QVNVSIAQSGRKKLQFAAGYRLNDGF 443
+SF+ +T GL+L+ +EL L+ G ++ +S + + A +NDG
Sbjct: 54 MSFQLKTRSARGLVLYFDDEGFCDFLELILTRGGRLQLSFSIFCAEPATLLADTPVNDGA 113
Query: 444 WHEVNFVAQENHAVISIDDVEGAEVRVSYPLLIRTGTS-YFFGGCP-------------- 488
WH V Q + + ID VE V V T S F GG P
Sbjct: 114 WHSVRIRRQFRNTTLFIDQVEAKWVEVKSKRRDMTVFSGLFVGGLPPELRAAALKLTLAS 173
Query: 489 ----KPASRW--DCHSNQTAFHGCMELLKVDGQLVNLTLVEGRRLGFYAEVLFDTCGITD 542
+P W D N + ++L VD V L G C +
Sbjct: 174 VREREPFKGWIRDVRVNSS------QVLPVDSGEVKLDDEPPNSGG------GSPCEAGE 221
Query: 543 RCSPNMCEHDGRCYQSWDDFICYCELTGYKGETC 576
+C + G C D +C C TG++G+ C
Sbjct: 222 EGEGGVCLNGGVCSVVDDQAVCDCSRTGFRGKDC 255
Score = 41.2 bits (95), Expect = 0.007
Identities = 32/129 (24%), Positives = 62/129 (48%), Gaps = 16/129 (12%)
Query: 175 LYFDGDDAISYRFP---RGVSRSLWDVFAFSFKTEEKDGLLLHAEGAQG--DYVTLELEG 229
++ G I+Y++P R +R+ D A F T +K+ +L+ + + G DY+ L +
Sbjct: 1167 IFSKGGGQITYKWPPNDRPSTRA--DRLAIGFSTVQKEAVLVRVDSSSGLGDYLELHIHQ 1224
Query: 230 AHLLLHMSLGSSPIQPRPGHTTVSAGGVLNDQHWHYVRVDRFGRDVNFTLDGY--VQRFI 287
+ + ++G+ I + ++ND +H VR R G + +D + ++R+
Sbjct: 1225 GKIGVKFNVGTDDI------AIEESNAIINDGKYHVVRFTRSGGNATLQVDSWPVIERYP 1278
Query: 288 L-NGDFERL 295
N D ERL
Sbjct: 1279 AGNNDNERL 1287
Score = 34.7 bits (78), Expect = 0.65
Identities = 45/168 (26%), Positives = 73/168 (43%), Gaps = 20/168 (11%)
Query: 175 LYFDGDDAISYRFPRGVSRSLWDVFAFSFKTEEKDGLLLHAEGAQGDYVTLEL---EGAH 231
L F G + RFP+ + +F KT GL+L+ + +G LEL G
Sbjct: 31 LEFPGAEGQWTRFPKW-NACCESEMSFQLKTRSARGLVLYFDD-EGFCDFLELILTRGGR 88
Query: 232 LLLHMSLGSSPIQPRPGHTTVSAGGVLNDQHWHYVRVDRFGRDVNFTLDGYVQRFI-LNG 290
L L S+ + +P T+ A +ND WH VR+ R R+ +D +++ +
Sbjct: 89 LQLSFSIFCA--EP----ATLLADTPVNDGAWHSVRIRRQFRNTTLFIDQVEAKWVEVKS 142
Query: 291 DFERLNLDTEMFIGGL-----VGAARKNLA---YRHNFRGCIENVIFN 330
+ + + +F+GGL A + LA R F+G I +V N
Sbjct: 143 KRRDMTVFSGLFVGGLPPELRAAALKLTLASVREREPFKGWIRDVRVN 190
Score = 32.7 bits (73), Expect = 2.5
Identities = 26/101 (25%), Positives = 41/101 (40%), Gaps = 7/101 (6%)
Query: 796 LRFPPIRANHSLDVSFYFRTSAPSGVFLENMGGPYCQWRRPYV---RVELNTSRDVV-FA 851
++ P + + DVS FR+ G+ + R + RV+L + D +
Sbjct: 769 IQLPVVMHTEAEDVSLRFRSQRAYGILMATTSRDSADTLRLELDAGRVKLTVNLDCIRIN 828
Query: 852 FDVGNGDENLTVHSDDFEFNDDEWHLVRAEINVKQARLRVD 892
+ G E L + ND+EWH VR K +L VD
Sbjct: 829 CNSSKGPETLFA---GYNLNDNEWHTVRVVRRGKSLKLTVD 866
>gi|14211536 neurexin 2 isoform alpha-1 precursor [Homo sapiens]
Length = 1712
Score = 130 bits (328), Expect = 7e-30
Identities = 118/449 (26%), Positives = 190/449 (42%), Gaps = 63/449 (14%)
Query: 177 FDGDDAISYRFPRGVSRSLWDVFAFSFKTEEKDGLLLHAEGAQGDYVTLELEGAHLLLHM 236
F G++ Y +S D +F+T +++GL+LH G DYV L L+ + L +
Sbjct: 292 FKGNEFFCYDLSHNPIQSSTDEITLAFRTLQRNGLMLHT-GKSADYVNLSLKSGAVWLVI 350
Query: 237 SLGSSPIQPRPGHTTVSAGGVLNDQHWHYVRVDRFGR---------------------DV 275
+LGS + G ND WH VRV R R D
Sbjct: 351 NLGSGAFEA----LVEPVNGKFNDNAWHDVRVTRNLRQHAGIGHAMVNKLHYLVTISVDG 406
Query: 276 NFTLDGYVQRFILNGDFERLNLDTEMFIGGLVGAAR-KNLAYRHNFRGCIENVIFN---- 330
T GY Q D+ L D +IGG A +NF GC+++V++
Sbjct: 407 ILTTTGYTQE-----DYTMLGSDDFFYIGGSPNTADLPGSPVSNNFMGCLKDVVYKNNDF 461
Query: 331 RVNIADLAVRRHSRITFEGKVAFRCLDPVP-HPINFGGPHNFVQVPGFPRRGRLAVSFRF 389
++ ++ LA ++ +G ++FRC D P+ F P FV +P + + ++S F
Sbjct: 462 KLELSRLAKEGDPKMKLQGDLSFRCEDVAALDPVTFESPEAFVALPRWSAKRTGSISLDF 521
Query: 390 RTWDLTGLLLFS---RLGDGLG---------HVELTLSEGQVNVSIAQ-SGRKKLQFAAG 436
RT + GLLLFS R G G G + + L +G + + + SG KL+ A+
Sbjct: 522 RTTEPNGLLLFSQGRRAGGGAGSHSSAQRADYFAMELLDGHLYLLLDMGSGGIKLR-ASS 580
Query: 437 YRLNDGFWHEVNFVAQENHAVISIDDVEGAEVRVSYPLLIRTGTSYFFGGCPK------- 489
++NDG W V+F IS++ + ++ + + GG P+
Sbjct: 581 RKVNDGEWCHVDFQRDGRKGSISVNSRSTPFLATGDSEILDLESELYLGGLPEGGRVDLP 640
Query: 490 -PASRWDCHSNQTAFHGCMELLKVDGQLVNLT-LVEGRRLGFYAEVLFDTCGITDRCSPN 547
P W + + + GC+ L +DG+ +L L E + G F + +C+
Sbjct: 641 LPPEVWTA-ALRAGYVGCVRDLFIDGRSRDLRGLAEAQ--GAVGVAPFCSRETLKQCASA 697
Query: 548 MCEHDGRCYQSWDDFICYCELTGYKGETC 576
C + G C + W+ FIC C TG+ G C
Sbjct: 698 PCRNGGVCREGWNRFICDCIGTGFLGRVC 726
Score = 110 bits (276), Expect = 7e-24
Identities = 110/429 (25%), Positives = 184/429 (42%), Gaps = 36/429 (8%)
Query: 168 CPYKADILYFDGDDAISYRFPRGVSRSLWDVFAFSFKTEEKDGLLLHAEGAQG-DYVTLE 226
C +A +L +DG + P + DV + F ++ GL++ + D + LE
Sbjct: 726 CEREATVLSYDGSMYMKIMLPNAMHTEAEDV-SLRFMSQRAYGLMMATTSRESADTLRLE 784
Query: 227 LEGAHLLLHMSLGSSPI--QPRPGHTTVSAGGVLNDQHWHYVRVDRFGRDVNFTLDGYVQ 284
L+G + L ++L + P G T+ AG LND WH VRV R G+ + ++D
Sbjct: 785 LDGGQMKLTVNLDCLRVGCAPSKGPETLFAGHKLNDNEWHTVRVVRRGKSLQLSVDNVTV 844
Query: 285 RFILNGDFERL---NLDTEMFIGGLVGAARKNLAYRHNFRGCIENVIFNRVNIADLAVRR 341
+ G RL N++T G++ R NF G + ++FN D +
Sbjct: 845 EGQMAGAHMRLEFHNIET-----GIMTERRFISVVPSNFIGHLSGLVFNGQPYMDQC--K 897
Query: 342 HSRITF-EGKVAFRCLDPVPHPINFGGPHNFVQVPGFPRRGRLAVSFRFRTWDLTGLLLF 400
IT+ E F V P+ F +++ + + + F+F+T GLLLF
Sbjct: 898 DGDITYCELNARFGLRAIVADPVTFKSRSSYLALATLQAYASMHLFFQFKTTAPDGLLLF 957
Query: 401 SRLGDGLGHVELTLSEGQVN-VSIAQSGRKKLQFAAGYRLNDGFWHEVNFVAQE--NHAV 457
+ G+G + + L +G ++ V +G ++ + +ND WH V V+++ N
Sbjct: 958 NS-GNGNDFIVIELVKGYIHYVFDLGNGPSLMKGNSDKPVNDNQWHNV-VVSRDPGNVHT 1015
Query: 458 ISIDD------VEGAE-VRVSYPLLIRTGTSYFFGGCPKPASRWDCHSNQTAFHGCMELL 510
+ ID GA + + L I + F PK + D F GC+ +
Sbjct: 1016 LKIDSRTVTQHSNGARNLDLKGELYIGGLSKNMFSNLPKLVASRD------GFQGCLASV 1069
Query: 511 KVDGQLVNLTLVEGRRLGFYAEVLFDTCGITDRCSPNMCEHDGRCYQSWDDFICYCELTG 570
++G+L +L R+G +V G + C+ C + G C Q WD F C C +T
Sbjct: 1070 DLNGRLPDLIADALHRIG---QVERGCDGPSTTCTEESCANQGVCLQQWDGFTCDCTMTS 1126
Query: 571 YKGETCHTP 579
Y G C+ P
Sbjct: 1127 YGGPVCNDP 1135
Score = 92.0 bits (227), Expect = 3e-18
Identities = 120/509 (23%), Positives = 200/509 (39%), Gaps = 130/509 (25%)
Query: 796 LRFPPIRANHSLDVSFYFRTSAPSGVFLENMGGPYCQWRRPYVRVELNTSRDVVFAFDVG 855
L ++A S+ + F F+T+AP G+ L N G ++ +EL + + FD+G
Sbjct: 929 LALATLQAYASMHLFFQFKTTAPDGLLLFNSGNG-----NDFIVIEL-VKGYIHYVFDLG 982
Query: 856 NGDENLTVHSDDFEFNDDEWHLVRAEINVKQAR-LRVDHRPWVLRPMPLQTYIWMEYDQP 914
NG + +SD ND++WH V + L++D R + ++
Sbjct: 983 NGPSLMKGNSDK-PVNDNQWHNVVVSRDPGNVHTLKIDSRTVTQHSNGARN---LDLKGE 1038
Query: 915 LYVGSAE-----------LKRRPFVGCLRAMRLNGVTLNLEGRA--------NASEGTSP 955
LY+G R F GCL ++ LNG +L A +G S
Sbjct: 1039 LYIGGLSKNMFSNLPKLVASRDGFQGCLASVDLNGRLPDLIADALHRIGQVERGCDGPST 1098
Query: 956 NCTGHCAHPRLPCFHGGRCVERYSYYTCDCDLTAFDGPYCNHDIGGFFEPGTWMRYNLQS 1015
CT C + G C++++ +TCDC +T++ GP CN +PGT +
Sbjct: 1099 TCTEES------CANQGVCLQQWDGFTCDCTMTSYGGPVCN-------DPGTTYIFGKGG 1145
Query: 1016 ALRSAAREFSHMLSRPVPGYEPGYIPGYDTPGYVPGYHGPGYRLPDYPRPGRPVPGYRGP 1075
AL + Y P RP +
Sbjct: 1146 ALIT-------------------------------------YTWPPNDRPSTRM------ 1162
Query: 1076 VYNVTGEEVSFSFSTSSAPAVLLYV--SSFVRDYMAVLIKDDGTLQLRYQLGTSPYVYQL 1133
+ ++ FST AVL+ V +S + DY+ + I D GT+ + + +GT
Sbjct: 1163 ------DRLAVGFSTHQRSAVLVRVDSASGLGDYLQLHI-DQGTVGVIFNVGTDDITIDE 1215
Query: 1134 TTRPVTDGQPHSINITRVYRNLFIQVDYFPLTEQKFSLLVDSQ---LDSPKALY-LGRVM 1189
V+DG+ H + TR N +QVD +P+ E+ + D++ + + Y LGRV+
Sbjct: 1216 PNAIVSDGKYHVVRFTRSGGNATLQVDSWPVNERYPAGNFDNERLAIARQRIPYRLGRVV 1275
Query: 1190 ETGVIDP--EIQRYNTPG------------FSGCLSGVRFNNVAPLKTHFRTPRPMTAEL 1235
+ ++D ++ +N+ F G +SG+ +N + L + AE
Sbjct: 1276 DEWLLDKGRQLTIFNSQAAIKIGGRDQGRPFQGQVSGLYYNGLKVL--------ALAAES 1327
Query: 1236 AEALRVQGELSESNCGAMPRLVSEVPPEL 1264
+R +G L RLV E P L
Sbjct: 1328 DPNVRTEGHL---------RLVGEGPSVL 1347
Score = 61.2 bits (147), Expect = 7e-09
Identities = 69/262 (26%), Positives = 121/262 (46%), Gaps = 36/262 (13%)
Query: 794 AALRFPPIRANHSLDVSFYFRTSAPSGVFLENMG-------GPYCQWRRP-YVRVELNTS 845
A + P A + +S FRT+ P+G+ L + G G + +R Y +EL
Sbjct: 502 AFVALPRWSAKRTGSISLDFRTTEPNGLLLFSQGRRAGGGAGSHSSAQRADYFAMELLDG 561
Query: 846 RDVVFAFDVGNGDENLTVHSDDFEFNDDEWHLVRAEINVKQARLRVDHR--PWVLRP--- 900
+ D+G+G L S + ND EW V + + ++ + V+ R P++
Sbjct: 562 H-LYLLLDMGSGGIKLRASSR--KVNDGEWCHVDFQRDGRKGSISVNSRSTPFLATGDSE 618
Query: 901 -MPLQTYIWM-------EYDQPL--YVGSAELKRRPFVGCLRAMRLNGVTLNLEGRANA- 949
+ L++ +++ D PL V +A L R +VGC+R + ++G + +L G A A
Sbjct: 619 ILDLESELYLGGLPEGGRVDLPLPPEVWTAAL-RAGYVGCVRDLFIDGRSRDLRGLAEAQ 677
Query: 950 -SEGTSPNCTGH----CAHPRLPCFHGGRCVERYSYYTCDCDLTAFDGPYCNHDIGGF-F 1003
+ G +P C+ CA PC +GG C E ++ + CDC T F G C + +
Sbjct: 678 GAVGVAPFCSRETLKQCASA--PCRNGGVCREGWNRFICDCIGTGFLGRVCEREATVLSY 735
Query: 1004 EPGTWMRYNLQSALRSAAREFS 1025
+ +M+ L +A+ + A + S
Sbjct: 736 DGSMYMKIMLPNAMHTEAEDVS 757
Score = 48.1 bits (113), Expect = 6e-05
Identities = 44/182 (24%), Positives = 72/182 (39%), Gaps = 13/182 (7%)
Query: 153 WNPRGKIGLRLGLYGCPYKADILYFDGDDAISYRFPRGVSRSLWDVFAFSFKTEEKDGLL 212
W P L L L +AD L F G R+ R + +FS +T LL
Sbjct: 7 WRPTPPPLLLLLLLALAARADGLEFGGGPGQWARYARWAGAASSGELSFSLRTNATRALL 66
Query: 213 LHAE-GAQGDYVTLELEGAHLLLHMSLGSSPIQPRPGHTTVSAGGVLNDQHWHYVRVDRF 271
L+ + G D++ L L L L +L + +P T+ + D WH V + R
Sbjct: 67 LYLDDGGDCDFLELLLVDGRLRLRFTLSCA--EP----ATLQLDTPVADDRWHMVLLTRD 120
Query: 272 GRDVNFTLDGYVQRFILNGDFERLNLDTEMFIGGLVGAAR------KNLAYRHNFRGCIE 325
R +DG + + + + +++F+GG+ R + Y FRG +
Sbjct: 121 ARRTALAVDGEARAAEVRSKRREMQVASDLFVGGIPPDVRLSALTLSTVKYEPPFRGLLA 180
Query: 326 NV 327
N+
Sbjct: 181 NL 182
Score = 42.4 bits (98), Expect = 0.003
Identities = 56/231 (24%), Positives = 88/231 (38%), Gaps = 21/231 (9%)
Query: 385 VSFRFRTWDLTGLLLFSRLGDGLGHVELTLSEGQVNVSIAQSGRKKLQFAAGYRLNDGFW 444
+SF RT LLL+ G +EL L +G++ + S + + D W
Sbjct: 53 LSFSLRTNATRALLLYLDDGGDCDFLELLLVDGRLRLRFTLSCAEPATLQLDTPVADDRW 112
Query: 445 HEVNFVAQENHAVISID-DVEGAEVRVSYPLLIRTGTSYFFGGCPKPASRWDCHSNQTA- 502
H V +++D + AEVR S ++ + F GG P P R + T
Sbjct: 113 HMVLLTRDARRTALAVDGEARAAEVR-SKRREMQVASDLFVGGIP-PDVRLSALTLSTVK 170
Query: 503 ----FHGCMELLKVDGQLVNLTLVEGRRLGFYAEVLFDTCGITDRCSP--NMCEHDGRC- 555
F G + LK+ + L +G R G A+ L C+P N C + G C
Sbjct: 171 YEPPFRGLLANLKLGERPPALLGSQGLR-GATADPL---------CAPARNPCANGGLCT 220
Query: 556 YQSWDDFICYCELTGYKGETCHTPLYKESCEAYRLSGKTSGNFTIDPDGSG 606
+ + C C TG+ G+ C + A+ G+ G+G
Sbjct: 221 VLAPGEVGCDCSHTGFGGKFCSEEEHPMEGPAHLTLNSEVGSLLFSEGGAG 271
Score = 40.4 bits (93), Expect = 0.012
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 1083 EVSFSFSTSSAPAVLLYVSSFVRDYMAVLIKDDGTLQLRYQLG-TSPYVYQLTTRPVTDG 1141
E+SFS T++ A+LLY+ L+ DG L+LR+ L P QL T PV D
Sbjct: 52 ELSFSLRTNATRALLLYLDDGGDCDFLELLLVDGRLRLRFTLSCAEPATLQLDT-PVADD 110
Query: 1142 QPHSINITRVYRNLFIQVD 1160
+ H + +TR R + VD
Sbjct: 111 RWHMVLLTRDARRTALAVD 129
Score = 40.4 bits (93), Expect = 0.012
Identities = 92/413 (22%), Positives = 147/413 (35%), Gaps = 76/413 (18%)
Query: 872 DDEWHLVRAEINVKQARLRVDHRPWVLRPMPLQTYIWMEYDQPLYVGSAELKRR------ 925
DD WH+V + ++ L VD + + + D L+VG R
Sbjct: 109 DDRWHMVLLTRDARRTALAVDGEARAAEVRSKRREMQVASD--LFVGGIPPDVRLSALTL 166
Query: 926 -------PFVGCLRAMRLNGVTLNLEGRANASEGTSPNCTGHCAHPRLPCFHGGRC-VER 977
PF G L ++L L G T+ CA R PC +GG C V
Sbjct: 167 STVKYEPPFRGLLANLKLGERPPALLGSQGLRGATADPL---CAPARNPCANGGLCTVLA 223
Query: 978 YSYYTCDCDLTAFDGPYCNHDIGGFFEPG-TWMRYNLQSALRS---AAREFSHMLSRPVP 1033
CDC T F G +C+ + P + + S L S A R + + +P
Sbjct: 224 PGEVGCDCSHTGFGGKFCSEEEHPMEGPAHLTLNSEVGSLLFSEGGAGRGGAGDVHQPTK 283
Query: 1034 GYEPGYIPGYDTPGYVPGYHGPGYRLPDYPRPGRPVPGYRGPVYNVTGEEVSFSFSTSSA 1093
G E +V + G + D P+ + T +E++ +F T
Sbjct: 284 GKEE----------FVATFKGNEFFCYDLS---------HNPIQSST-DEITLAFRTLQR 323
Query: 1094 PAVLLYVSSFVRDYMAVLIKDDGTLQLRYQLGTSPYVYQLTTRPV----TDGQPHSINIT 1149
++L+ DY+ + +K G + L LG+ ++ PV D H + +T
Sbjct: 324 NGLMLHTGKSA-DYVNLSLK-SGAVWLVINLGSG--AFEALVEPVNGKFNDNAWHDVRVT 379
Query: 1150 RVYRN---------------LFIQVDYFPLTEQKFSLLVDSQLDSPKALYLGRVMETGVI 1194
R R + I VD LT ++ + L S Y+G T +
Sbjct: 380 RNLRQHAGIGHAMVNKLHYLVTISVDGI-LTTTGYTQEDYTMLGSDDFFYIGGSPNTADL 438
Query: 1195 DPEIQRYNTPGFSGCLSGVRFNNVAPLKTHFRTPRPMTAELAE-ALRVQGELS 1246
N F GCL V + N F+ A+ + +++QG+LS
Sbjct: 439 PGSPVSNN---FMGCLKDVVYKN-----NDFKLELSRLAKEGDPKMKLQGDLS 483
>gi|21070969 neurexin 3 isoform 1 precursor [Homo sapiens]
Length = 1061
Score = 115 bits (288), Expect = 3e-25
Identities = 108/422 (25%), Positives = 184/422 (43%), Gaps = 22/422 (5%)
Query: 168 CPYKADILYFDGDDAISYRFPRGVSRSLWDVFAFSFKTEEKDGLLLHAEGAQG-DYVTLE 226
C +A IL +DG + P + DV +F F ++ GLL+ D + LE
Sbjct: 306 CEREASILSYDGSMYMKIIMPMVMHTEAEDV-SFRFMSQRAYGLLVATTSRDSADTLRLE 364
Query: 227 LEGAHLLLHMSLGSSPIQ--PRPGHTTVSAGGVLNDQHWHYVRVDRFGRDVNFTLDGYVQ 284
L+G + L ++L I G T+ AG LND WH VRV R G+ + T+D V
Sbjct: 365 LDGGRVKLMVNLDCIRINCNSSKGPETLYAGQKLNDNEWHTVRVVRRGKSLKLTVDDDVA 424
Query: 285 RFILNGDFERL---NLDTEMFIGGLVGAARKNLAYRHNFRGCIENVIFNRVNIADLAVRR 341
+ GD RL N++T G++ R +F G +++++FN + DL +
Sbjct: 425 EGTMVGDHTRLEFHNIET-----GIMTEKRYISVVPSSFIGHLQSLMFNGLLYIDLC--K 477
Query: 342 HSRITF-EGKVAFRCLDPVPHPINFGGPHNFVQVPGFPRRGRLAVSFRFRTWDLTGLLLF 400
+ I + E K F + + P+ F +++ + + + F+F+T G +LF
Sbjct: 478 NGDIDYCELKARFGLRNIIADPVTFKTKSSYLSLATLQAYTSMHLFFQFKTTSPDGFILF 537
Query: 401 SRLGDGLGHVELTLSEGQVN-VSIAQSGRKKLQFAAGYRLNDGFWHEVNFVAQENHA-VI 458
+ GDG + + L +G ++ V +G ++ + LND WH V ++ +
Sbjct: 538 NS-GDGNDFIAVELVKGYIHYVFDLGNGPNVIKGNSDRPLNDNQWHNVVITRDNSNTHSL 596
Query: 459 SIDDVEGAEVRVSYPLLIRTGTSYFFGGCPKPASRWD-CHSNQTAFHGCMELLKVDGQLV 517
+D +V L G Y G S +++ F GC+ + ++G+L
Sbjct: 597 KVDTKVVTQVINGAKNLDLKGDLYMAGLAQGMYSNLPKLVASRDGFQGCLASVDLNGRLP 656
Query: 518 NLTLVEGRRLGFYAEVLFDTCGITDRCSPNMCEHDGRCYQSWDDFICYCELTGYKGETCH 577
+L R G ++ G + C + C + G C Q W+ F C C +T Y G C+
Sbjct: 657 DLINDALHRSG---QIERGCEGPSTTCQEDSCANQGVCMQQWEGFTCDCSMTSYSGNQCN 713
Query: 578 TP 579
P
Sbjct: 714 DP 715
Score = 84.7 bits (208), Expect = 5e-16
Identities = 74/320 (23%), Positives = 127/320 (39%), Gaps = 53/320 (16%)
Query: 295 LNLDTEMFIGGLVGAAR-KNLAYRHNFRGCIENVIFN----RVNIADLAVRRHSRITFEG 349
L D ++GG A +NF GC++ V++ R+ ++ LA +++ G
Sbjct: 2 LGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKNNDIRLELSRLARIADTKMKIYG 61
Query: 350 KVAFRCLDPVP-HPINFGGPHNFVQVPGFPRRGRLAVSFRFRTWDLTGLLLFSR------ 402
+V F+C + PINF P ++ +P + + ++SF FRT + GL+LF+
Sbjct: 62 EVVFKCENVATLDPINFETPEAYISLPKWNTKRMGSISFDFRTTEPNGLILFTHGKPQER 121
Query: 403 -----------------LGDGLGHVELTLSEGQVNVSIAQSGRKKLQFAAGYRLNDGFWH 445
L DG ++ L + G + V Q + NDG W+
Sbjct: 122 KDARSQKNTKVDFFAVELLDGNLYLLLDMGSGTIKVKATQK-----------KANDGEWY 170
Query: 446 EVNFVAQENHAVISIDDVEGAEVRVSYPLLIRTGTSYFFGGCPK-------PASRWDCHS 498
V+ IS++ ++ + GG P+ P W
Sbjct: 171 HVDIQRDGRSGTISVNSRRTPFTASGESEILDLEGDMYLGGLPENRAGLILPTELWTAML 230
Query: 499 NQTAFHGCMELLKVDGQLVNLTLVEGRRLGFYAEVLFDTCG--ITDRCSPNMCEHDGRCY 556
N + GC+ L +DG+ N+ + + A + +C +C C+++ C
Sbjct: 231 NY-GYVGCIRDLFIDGRSKNIRQLAEMQ---NAAGVKSSCSRMSAKQCDSYPCKNNAVCK 286
Query: 557 QSWDDFICYCELTGYKGETC 576
W+ FIC C TGY G TC
Sbjct: 287 DGWNRFICDCTGTGYWGRTC 306
Score = 82.4 bits (202), Expect = 3e-15
Identities = 101/427 (23%), Positives = 174/427 (40%), Gaps = 97/427 (22%)
Query: 760 GDTNRSTSEAQFFLRPLRCYGDRNSWNTISFHTGAA-LRFPPIRANHSLDVSFYFRTSAP 818
GD + +A+F LR + + ++F T ++ L ++A S+ + F F+T++P
Sbjct: 479 GDIDYCELKARFGLRNIIA-------DPVTFKTKSSYLSLATLQAYTSMHLFFQFKTTSP 531
Query: 819 SGVFLENMGGPYCQWRRPYVRVELNTSRDVVFAFDVGNGDENLTVHSDDFEFNDDEWH-L 877
G L N G ++ VEL + + FD+GNG N+ + D ND++WH +
Sbjct: 532 DGFILFNSGDG-----NDFIAVEL-VKGYIHYVFDLGNGP-NVIKGNSDRPLNDNQWHNV 584
Query: 878 VRAEINVKQARLRVDHRPWV-----LRPMPLQTYIWME-YDQPLYVGSAEL--KRRPFVG 929
V N L+VD + + + L+ ++M Q +Y +L R F G
Sbjct: 585 VITRDNSNTHSLKVDTKVVTQVINGAKNLDLKGDLYMAGLAQGMYSNLPKLVASRDGFQG 644
Query: 930 CLRAMRLNGVTLNLEGRA--------NASEGTSPNCTGHCAHPRLPCFHGGRCVERYSYY 981
CL ++ LNG +L A EG S C C + G C++++ +
Sbjct: 645 CLASVDLNGRLPDLINDALHRSGQIERGCEGPSTTCQEDS------CANQGVCMQQWEGF 698
Query: 982 TCDCDLTAFDGPYCNHDIGGFFEPGTWMRYNLQSALRSAAREFSHMLSRPVPGYEPGYIP 1041
TCDC +T++ G CN +PG
Sbjct: 699 TCDCSMTSYSGNQCN-------DPGA---------------------------------- 717
Query: 1042 GYDTPGYVPGYHGPGYRLPDYPRPGRPVPGYRGPVYNVTGEEVSFSFSTSSAPAVLLYVS 1101
Y+ G G G L +P RP + + ++ FST+ +L+ +
Sbjct: 718 -----TYIFGKSG-GLILYTWPANDRP---------STRSDRLAVGFSTTVKDGILVRID 762
Query: 1102 SF--VRDYMAVLIKDDGTLQLRYQLGTSPYVYQLTTRPVTDGQPHSINITRVYRNLFIQV 1159
S + D++ + I + G + + + +GT + PV DG+ H + TR N +QV
Sbjct: 763 SAPGLGDFLQLHI-EQGKIGVVFNIGTVDISIKEERTPVNDGKYHVVRFTRNGGNATLQV 821
Query: 1160 DYFPLTE 1166
D +P+ E
Sbjct: 822 DNWPVNE 828
Score = 52.8 bits (125), Expect = 2e-06
Identities = 58/269 (21%), Positives = 105/269 (39%), Gaps = 38/269 (14%)
Query: 788 ISFHTGAA-LRFPPIRANHSLDVSFYFRTSAPSGVFLENMGGPYCQWRRPYVRVELNTSR 846
I+F T A + P +SF FRT+ P+G+ L G P R R + NT
Sbjct: 76 INFETPEAYISLPKWNTKRMGSISFDFRTTEPNGLILFTHGKPQ---ERKDARSQKNTKV 132
Query: 847 D----------VVFAFDVGNGDENLTVHSDDFEFNDDEWHLVRAEINVKQARLRVDHRPW 896
D + D+G+G + V + + ND EW+ V + + + + V+ R
Sbjct: 133 DFFAVELLDGNLYLLLDMGSG--TIKVKATQKKANDGEWYHVDIQRDGRSGTISVNSRRT 190
Query: 897 VLRPMPLQTYIWMEYDQPLYVGSAELKRRP---------------FVGCLRAMRLNGVTL 941
+ +E D +Y+G R +VGC+R + ++G +
Sbjct: 191 PFTASGESEILDLEGD--MYLGGLPENRAGLILPTELWTAMLNYGYVGCIRDLFIDGRSK 248
Query: 942 NLEGRANASE--GTSPNCTGHCAHP--RLPCFHGGRCVERYSYYTCDCDLTAFDGPYCNH 997
N+ A G +C+ A PC + C + ++ + CDC T + G C
Sbjct: 249 NIRQLAEMQNAAGVKSSCSRMSAKQCDSYPCKNNAVCKDGWNRFICDCTGTGYWGRTCER 308
Query: 998 DIGGF-FEPGTWMRYNLQSALRSAAREFS 1025
+ ++ +M+ + + + A + S
Sbjct: 309 EASILSYDGSMYMKIIMPMVMHTEAEDVS 337
Score = 52.4 bits (124), Expect = 3e-06
Identities = 47/206 (22%), Positives = 87/206 (42%), Gaps = 37/206 (17%)
Query: 120 NSTFFGNVNESAVVRHDLHFHFTARYIRIVPLAWNPRGKIGLRLGLYGCPYKADILYFDG 179
++ F G + E +D+ + R RI G++ ++ C A +
Sbjct: 25 SNNFMGCLKEVVYKNNDIRLELS-RLARIADTKMKIYGEV-----VFKCENVATL----- 73
Query: 180 DDAISYRFPRG-VSRSLWDV-----FAFSFKTEEKDGLLLHAEG-------------AQG 220
D I++ P +S W+ +F F+T E +GL+L G +
Sbjct: 74 -DPINFETPEAYISLPKWNTKRMGSISFDFRTTEPNGLILFTHGKPQERKDARSQKNTKV 132
Query: 221 DYVTLELEGAHLLLHMSLGSSPIQPRPGHTTVSAGGVLNDQHWHYVRVDRFGRDVNFTLD 280
D+ +EL +L L + +GS I+ + ND W++V + R GR +++
Sbjct: 133 DFFAVELLDGNLYLLLDMGSGTIKVKATQKKA------NDGEWYHVDIQRDGRSGTISVN 186
Query: 281 GYVQRFILNGDFERLNLDTEMFIGGL 306
F +G+ E L+L+ +M++GGL
Sbjct: 187 SRRTPFTASGESEILDLEGDMYLGGL 212
Score = 42.0 bits (97), Expect = 0.004
Identities = 41/144 (28%), Positives = 66/144 (45%), Gaps = 8/144 (5%)
Query: 1080 TGEEVSFSFSTSSAPAVLLYVSSFVRDYMAV-LIKDDGTLQLRYQLGTSPYVYQLTT-RP 1137
T + F F T+S +L+ S D++AV L+K G + + LG P V + + RP
Sbjct: 518 TSMHLFFQFKTTSPDGFILFNSGDGNDFIAVELVK--GYIHYVFDLGNGPNVIKGNSDRP 575
Query: 1138 VTDGQPHSINITRVYRNLF-IQVDYFPLTEQKFSLLVDSQLDSPKALYLGRVMETGVIDP 1196
+ D Q H++ ITR N ++VD +T+ + LD LY+ + + +
Sbjct: 576 LNDNQWHNVVITRDNSNTHSLKVDTKVVTQ---VINGAKNLDLKGDLYMAGLAQGMYSNL 632
Query: 1197 EIQRYNTPGFSGCLSGVRFNNVAP 1220
+ GF GCL+ V N P
Sbjct: 633 PKLVASRDGFQGCLASVDLNGRLP 656
Score = 42.0 bits (97), Expect = 0.004
Identities = 38/168 (22%), Positives = 69/168 (41%), Gaps = 20/168 (11%)
Query: 197 DVFAFSFKTEEKDGLLLHAEGAQ--GDYVTLELEGAHLLLHMSLGSSPIQPRPGHTTVSA 254
D A F T KDG+L+ + A GD++ L +E + + ++G+ I + T V
Sbjct: 743 DRLAVGFSTTVKDGILVRIDSAPGLGDFLQLHIEQGKIGVVFNIGTVDISIKEERTPV-- 800
Query: 255 GGVLNDQHWHYVRVDRFGRDVNFTLDGYV--QRFILNGDFERLNLDTEMFIGGLVGAARK 312
ND +H VR R G + +D + + + N ++ IGG
Sbjct: 801 ----NDGKYHVVRFTRNGGNATLQVDNWPVNEHYPTGRQLTIFNTQAQIAIGGKDKG--- 853
Query: 313 NLAYRHNFRGCIENVIFNRVNIADLAVRRHSRITFEGKVAFRCLDPVP 360
F+G + + ++ + + ++A + I G V R + VP
Sbjct: 854 -----RLFQGQLSGLYYDGLKVLNMAAENNPNIKINGSV--RLVGEVP 894
>gi|169184330 PREDICTED: novel protein similar to contactin associated
protein-like 3 (CNTNAP3) [Homo sapiens]
Length = 291
Score = 103 bits (257), Expect = 1e-21
Identities = 55/154 (35%), Positives = 93/154 (60%), Gaps = 4/154 (2%)
Query: 1079 VTGEEVSFSFSTSSAPAVLLYVSSFVRDYMAVLIKDDGTLQLRYQLGT--SPYVYQLTTR 1136
+T E ++ SF T+ P++LLYVSSF +Y++V++ ++G+LQ+RY+L +P + +
Sbjct: 40 LTREMITLSFRTTRTPSLLLYVSSFYEEYLSVILANNGSLQIRYKLDRHQNPDAFTFDFK 99
Query: 1137 PVTDGQPHSINITRVYRNLFIQVDYFPLTEQKFSLLVDSQLDSPKALYLGRVMETGVIDP 1196
+ DGQ H + I R + ++V+ +++ L ++ ++ K+L LG+V+E DP
Sbjct: 100 NMADGQLHQVKINREEAVVMVEVNQS--AKKQVILSSGTEFNAVKSLILGKVLEAAGADP 157
Query: 1197 EIQRYNTPGFSGCLSGVRFNNVAPLKTHFRTPRP 1230
+ +R T GF+GCLS VRF APLK R P
Sbjct: 158 DTRRAATSGFTGCLSAVRFGCAAPLKAALRPSGP 191
>gi|13325064 cadherin EGF LAG seven-pass G-type receptor 2 [Homo
sapiens]
Length = 2923
Score = 74.3 bits (181), Expect = 7e-13
Identities = 115/483 (23%), Positives = 173/483 (35%), Gaps = 110/483 (22%)
Query: 189 RGVSRSLWDVFAFSFKTEEKDGLLLHAE--GAQGDYVTLELEGAHLLLHMSLGSSPIQPR 246
RG+ + A SF T+E+DGLLL+ + D+V LE+ + L S G S
Sbjct: 1381 RGLRQRFHFTLALSFATKERDGLLLYNGRFNEKHDFVALEVIQEQVQLTFSAGEST---- 1436
Query: 247 PGHTTVSA---GGVLNDQHWHYVRVDRFGRDVN----------------FTLDGYVQRFI 287
TTVS GGV +D WH V++ + + + T+DG
Sbjct: 1437 ---TTVSPFVPGGV-SDGQWHTVQLKYYNKPLLGQTGLPQGPSEQKVAVVTVDGCDTGVA 1492
Query: 288 LN-----------------GDFERLNLDTEMFIGGLVGAARKNLAYRHNFRGCIEN--VI 328
L G + L+L + +GG+ F GC+ N V
Sbjct: 1493 LRFGSVLGNYSCAAQGTQGGSKKSLDLTGPLLLGGVPDLPESFPVRMRQFVGCMRNLQVD 1552
Query: 329 FNRVNIADLAVRR-------------HSRITFEGKV------AFRCLDPVPHPINFGG-- 367
+++AD S G AF C P+ FGG
Sbjct: 1553 SRHIDMADFIANNGTVPGCPAKKNVCDSNTCHNGGTCVNQWDAFSC----ECPLGFGGKS 1608
Query: 368 -------PHNFVQVP-------GFPRRGRLAVSFRFRTWDLTGLLLFSRLGDGLGHVELT 413
P +F+ P +S FRT G+LL + G + L
Sbjct: 1609 CAQEMANPQHFLGSSLVAWHGLSLPISQPWYLSLMFRTRQADGVLL-QAITRGRSTITLQ 1667
Query: 414 LSEGQVNVSIAQSGRK--KLQFAAGYRLNDGFWHEVNFVAQEN----HAVISID-DVEGA 466
L EG V +S+ +G + L+ G R NDG WH + HA++S D + A
Sbjct: 1668 LREGHVMLSVEGTGLQASSLRLEPG-RANDGDWHHAQLALGASGGPGHAILSFDYGQQRA 1726
Query: 467 EVRVSYPLLIRTGTSYFFGGCPKPASRWDCHSNQTAFHGCMELLKVDGQLVNLTLVE--- 523
E + L ++ GG P PA F GC++ ++V + ++
Sbjct: 1727 EGNLGPRLHGLHLSNITVGGIPGPAG-----GVARGFRGCLQGVRVSDTPEGVNSLDPSH 1781
Query: 524 GRRLGFYAEVLFDTCGITDRCSPNMCEHDGRCYQSWDDFICYCELTGYKGETCHTPLYKE 583
G + + C + D C N C + C WD + C C+ GY G+ C
Sbjct: 1782 GESIN-----VEQGCSLPDPCDSNPCPANSYCSNDWDSYSCSCD-PGYYGDNCTNVCDLN 1835
Query: 584 SCE 586
CE
Sbjct: 1836 PCE 1838
Score = 51.2 bits (121), Expect = 7e-06
Identities = 61/248 (24%), Positives = 96/248 (38%), Gaps = 53/248 (21%)
Query: 369 HNFVQVPGFPRRGRLAVSFRFRTWDLTGLLLFS-RLGDGLGHVELTLSEGQVNV--SIAQ 425
H+F+ G +R ++ F T + GLLL++ R + V L + + QV + S +
Sbjct: 1375 HSFITFRGLRQRFHFTLALSFATKERDGLLLYNGRFNEKHDFVALEVIQEQVQLTFSAGE 1434
Query: 426 SGRKKLQFAAGYRLNDGFWHEVNF----------------VAQENHAVISIDDVE-GAEV 468
S F G ++DG WH V +++ AV+++D + G +
Sbjct: 1435 STTTVSPFVPG-GVSDGQWHTVQLKYYNKPLLGQTGLPQGPSEQKVAVVTVDGCDTGVAL 1493
Query: 469 RVSYPL-----------------LIRTGTSYFFGGCPKPASRWDCHSNQTAFHGCMELLK 511
R L L TG GG P + Q F GCM L+
Sbjct: 1494 RFGSVLGNYSCAAQGTQGGSKKSLDLTG-PLLLGGVPDLPESFPVRMRQ--FVGCMRNLQ 1550
Query: 512 VDGQLVNLT---LVEGRRLGFYAEVLFDTCGITDRCSPNMCEHDGRCYQSWDDFICYCEL 568
VD + +++ G G A+ + C N C + G C WD F C C L
Sbjct: 1551 VDSRHIDMADFIANNGTVPGCPAK--------KNVCDSNTCHNGGTCVNQWDAFSCECPL 1602
Query: 569 TGYKGETC 576
G+ G++C
Sbjct: 1603 -GFGGKSC 1609
Score = 41.2 bits (95), Expect = 0.007
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 919 SAELKRRPFVGCLRAMRLNGVTLNLEGRANASEGTSPNCTGHC-AHPRLPCFHGGRCVER 977
S ++ R FVGC+R ++++ +++ A+ GT P C C +GG CV +
Sbjct: 1534 SFPVRMRQFVGCMRNLQVDSRHIDMADFI-ANNGTVPGCPAKKNVCDSNTCHNGGTCVNQ 1592
Query: 978 YSYYTCDCDLTAFDGPYCNHDI 999
+ ++C+C L F G C ++
Sbjct: 1593 WDAFSCECPL-GFGGKSCAQEM 1613
>gi|7656967 cadherin EGF LAG seven-pass G-type receptor 1 [Homo
sapiens]
Length = 3014
Score = 72.0 bits (175), Expect = 4e-12
Identities = 109/489 (22%), Positives = 186/489 (38%), Gaps = 118/489 (24%)
Query: 189 RGVSRSLWDVFAFSFKTEEKDGLLLHAE--GAQGDYVTLELEGAHLLLHMSLGSSPIQPR 246
RG+ + + +F T+E++GLLL+ + D++ LE+ + L S G +
Sbjct: 1456 RGLRQRFHFTISLTFATQERNGLLLYNGRFNEKHDFIALEIVDEQVQLTFSAGETTTTVA 1515
Query: 247 PGHTTVSAGGVLNDQHWHYVRVD-----------------------------------RF 271
P V +G ++D WH V+V RF
Sbjct: 1516 P---KVPSG--VSDGRWHSVQVQYYNKPNIGHLGLPHGPSGEKMAVVTVDDCDTTMAVRF 1570
Query: 272 GRDV-NFTLDGYVQRFILNGDFERLNLDTEMFIGGLVGAARKNLAYRHNFRGCIENVIFN 330
G+D+ N++ + G + L+L + +GG+ + F GC+ N+ +
Sbjct: 1571 GKDIGNYSCAAQGTQ---TGSKKSLDLTGPLLLGGVPNLPEDFPVHNRQFVGCMRNLSVD 1627
Query: 331 RVNIADLAVRRHSRITFEGKVAFR---------------------------------CLD 357
N+ D+A + T EG A R C
Sbjct: 1628 GKNV-DMAGFIANNGTREGCAARRNFCDGRRCQNGGTCVNRWNMYLCECPLRFGGKNCEQ 1686
Query: 358 PVPHPINFGGP--------HNFVQVPGFPRRGRLAVSFRFRTWDLTGLLLFSRLGDGLGH 409
+PHP F G + + VP + L + FR R D L+ + G
Sbjct: 1687 AMPHPQLFSGESVVSWSDLNIIISVPWY-----LGLMFRTRKEDSV-LMEATSGGPTSFR 1740
Query: 410 VELTLSEGQVNVSIAQSGRKKLQFAAGYRLNDGFWH----EVNFVAQENH----AVISID 461
+++ + Q VS S + + + G R+ DG WH E+ V +++ +++D
Sbjct: 1741 LQILNNYLQFEVSHGPSDVESVMLS-GLRVTDGEWHHLLIELKNVKEDSEMKHLVTMTLD 1799
Query: 462 ---DVEGAEVRVSYPLLIRTGTSYFFGGCPKPASRWDCHSNQTAFHGCMELLKVDGQLVN 518
D A++ P L T S GG + D S + F GCM+ +++ G N
Sbjct: 1800 YGMDQNKADIGGMLPGL--TVRSVVVGGASE-----DKVSVRRGFRGCMQGVRMGGTPTN 1852
Query: 519 L-TLVEGRRLGFYAEVLFDTCGITDRCSPNMCEHDGRCYQSWDDFICYCELTGYKGETCH 577
+ TL L + D C + D C+ + C + RC+ +W+D+ C C+ GY G C
Sbjct: 1853 VATLNMNNALKVRVK---DGCDVDDPCTSSPCPPNSRCHDAWEDYSCVCD-KGYLGINCV 1908
Query: 578 TPLYKESCE 586
+ CE
Sbjct: 1909 DACHLNPCE 1917
Score = 55.5 bits (132), Expect = 4e-07
Identities = 65/256 (25%), Positives = 98/256 (38%), Gaps = 67/256 (26%)
Query: 368 PHNFVQVPGFPRRGRLAVSFRFRTWDLTGLLL----FSRLGDGLG------HVELTLSEG 417
P +FV G +R +S F T + GLLL F+ D + V+LT S G
Sbjct: 1449 PQSFVTFRGLRQRFHFTISLTFATQERNGLLLYNGRFNEKHDFIALEIVDEQVQLTFSAG 1508
Query: 418 QVNVSIAQSGRKKLQFAAGYRLNDGFWHEVNF----------------VAQENHAVISID 461
+ ++A + +G ++DG WH V + E AV+++D
Sbjct: 1509 ETTTTVAP------KVPSG--VSDGRWHSVQVQYYNKPNIGHLGLPHGPSGEKMAVVTVD 1560
Query: 462 DVE-------GAEV-----------RVSYPLLIRTGTSYFFGGCPKPASRWDCHSNQTAF 503
D + G ++ S L TG GG P + H+ Q F
Sbjct: 1561 DCDTTMAVRFGKDIGNYSCAAQGTQTGSKKSLDLTG-PLLLGGVPNLPEDFPVHNRQ--F 1617
Query: 504 HGCMELLKVDGQLVNLT---LVEGRRLGFYAEVLFDTCGITDRCSPNMCEHDGRCYQSWD 560
GCM L VDG+ V++ G R G A F C C++ G C W+
Sbjct: 1618 VGCMRNLSVDGKNVDMAGFIANNGTREGCAARRNF--------CDGRRCQNGGTCVNRWN 1669
Query: 561 DFICYCELTGYKGETC 576
++C C L + G+ C
Sbjct: 1670 MYLCECPLR-FGGKNC 1684
Score = 46.6 bits (109), Expect = 2e-04
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Query: 925 RPFVGCLRAMRLNGVTLNLEGRANASEGTSPNCTGH---CAHPRLPCFHGGRCVERYSYY 981
R FVGC+R + ++G +++ G A+ GT C C R C +GG CV R++ Y
Sbjct: 1615 RQFVGCMRNLSVDGKNVDMAGFI-ANNGTREGCAARRNFCDGRR--CQNGGTCVNRWNMY 1671
Query: 982 TCDCDLTAFDGPYC 995
C+C L F G C
Sbjct: 1672 LCECPL-RFGGKNC 1684
Score = 34.7 bits (78), Expect = 0.65
Identities = 44/187 (23%), Positives = 71/187 (37%), Gaps = 30/187 (16%)
Query: 967 PCFHGGRCVERYSYYTCDCDLTAFDGPYCNHDIGGFFEPGTWMRYNLQSALRSAAREFSH 1026
PC GRC R YTC+C F G +C D +
Sbjct: 1371 PCGANGRCRSREGGYTCEC-FEDFTGEHCEVDA------------RSGRCANGVCKNGGT 1417
Query: 1027 MLSRPVPGYEPGYIPGYDTPGYVPGYHGPGYRLPDYPRPGRPVPGYRG--PVYNVTGEEV 1084
++ + G+ PG Y P + P + +RG ++ T +
Sbjct: 1418 CVNLLIGGFHCVCPPG--------EYERPYCEVTTRSFPPQSFVTFRGLRQRFHFT---I 1466
Query: 1085 SFSFSTSSAPAVLLYVSSF--VRDYMAVLIKDDGTLQLRYQLG-TSPYVYQLTTRPVTDG 1141
S +F+T +LLY F D++A+ I D+ +QL + G T+ V V+DG
Sbjct: 1467 SLTFATQERNGLLLYNGRFNEKHDFIALEIVDE-QVQLTFSAGETTTTVAPKVPSGVSDG 1525
Query: 1142 QPHSINI 1148
+ HS+ +
Sbjct: 1526 RWHSVQV 1532
Score = 32.7 bits (73), Expect = 2.5
Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 7/68 (10%)
Query: 924 RRPFVGCLRAMRLNGV-----TLNLEGRANASEGTSPNCTGHCAHPRLPCFHGGRCVERY 978
RR F GC++ +R+ G TLN+ + C PC RC + +
Sbjct: 1834 RRGFRGCMQGVRMGGTPTNVATLNMNNALKVRVKDGCDVDDPCTSS--PCPPNSRCHDAW 1891
Query: 979 SYYTCDCD 986
Y+C CD
Sbjct: 1892 EDYSCVCD 1899
>gi|38788416 laminin, alpha 1 precursor [Homo sapiens]
Length = 3075
Score = 70.5 bits (171), Expect = 1e-11
Identities = 86/324 (26%), Positives = 129/324 (39%), Gaps = 37/324 (11%)
Query: 202 SFKTEEKDGLLLH-AEGAQGDYVTLELEGAHLLLHMSLGSSPIQPRPGHTTVSAGGVLND 260
S +T GL+ + A Q DY L+L G L LG G T VS +L+D
Sbjct: 2742 SIRTFASSGLIYYMAHQNQADYAVLQLHGGRLHFMFDLGK-------GRTKVSHPALLSD 2794
Query: 261 QHWHYVRVDRFGRDVNFTLDGYVQRFI-LNGDFERLNLDTEMFIGGLVG--AARKNLAYR 317
WH V+ D R T+DG + + GD L+++ ++GGL ARK
Sbjct: 2795 GKWHTVKTDYVKRKGFITVDGRESPMVTVVGDGTMLDVEGLFYLGGLPSQYQARKIGNIT 2854
Query: 318 HNFRGCIENVIFNRVNI-ADLAVRRHSRITFEGKVAFRCLDPVPHPINFGGPHNFVQV-P 375
H+ CI +V N + D V S T RC F G V
Sbjct: 2855 HSIPACIGDVTVNSKQLDKDSPV---SAFTVN-----RCYAVAQEGTYFDGSGYAALVKE 2906
Query: 376 GFPRRGRLAVSFRFRTWDLTGLLL--FSRLGDGLGHVELTLSEGQVNVSIAQSGRKKLQF 433
G+ + + ++ FRT G+LL + D +G L L +G+V + +
Sbjct: 2907 GYKVQSDVNITLEFRTSSQNGVLLGISTAKVDAIG---LELVDGKVLFHVNNGAGR---I 2960
Query: 434 AAGYR------LNDGFWHEVNFVAQENHAVISID-DVEGAEVRVSYPLLIRTGTSYFFGG 486
A Y L DG WH + ++ + +D + GAE + + T + GG
Sbjct: 2961 TAAYEPKTATVLCDGKWHTLQANKSKHRITLIVDGNAVGAESPHTQSTSVDTNNPIYVGG 3020
Query: 487 CPKPASRWDCHSNQTAFHGCMELL 510
P + C +QT+F GC+ L
Sbjct: 3021 YPAGVKQ-KCLRSQTSFRGCLRKL 3043
Score = 54.7 bits (130), Expect = 6e-07
Identities = 64/286 (22%), Positives = 108/286 (37%), Gaps = 28/286 (9%)
Query: 191 VSRSLWDVFAFSFKTEEKDGLLLH-AEGAQGDYVTLELEGAHLLLHMSLGSSPIQPRPGH 249
+S + ++ + KT+E D LL + D++ +E+ + LGS G
Sbjct: 2134 ISSTNYNTLTLNVKTQEPDNLLFYLGSSTASDFLAVEMRRGRVAFLWDLGS-------GS 2186
Query: 250 TTVSAGGV-LNDQHWHYVRVDRFGR---------DVNFTLDGYVQRFILNGDFERLNLDT 299
T + ++D WH + V RFG N + + +N T
Sbjct: 2187 TRLEFPDFPIDDNRWHSIHVARFGNIGSLSVKEMSSNQKSPTKTSKSPGTANVLDVNNST 2246
Query: 300 EMFIGGLVGAARKNLAYR-HNFRGCIENVIFNRVNIADLAVRRHSRITFEGKV--AFRCL 356
MF+GGL G +K+ A + +F+GC+ N +I + I EGK F
Sbjct: 2247 LMFVGGLGGQIKKSPAVKVTHFKGCLGEAFLNGKSIG-----LWNYIEREGKCRGCFGSS 2301
Query: 357 DPVPHPINFGGPHNFVQVPGFPRRGRLAVSFRFRTWDLTGLLLFSRLGDGLGHVELTLSE 416
+F G V P + F T+ GLLL+ + + L
Sbjct: 2302 QNEDPSFHFDGSGYSVVEKSLPATVTQIIML-FNTFSPNGLLLYLGSYGTKDFLSIELFR 2360
Query: 417 GQVNVSIAQSGRKKLQFAAGYRLNDGFWHEVNFVAQENHAVISIDD 462
G+V V + G + R N+G W+++ F V+++ D
Sbjct: 2361 GRVKV-MTDLGSGPITLLTDRRYNNGTWYKIAFQRNRKQGVLAVID 2405
Score = 50.4 bits (119), Expect = 1e-05
Identities = 96/426 (22%), Positives = 180/426 (42%), Gaps = 67/426 (15%)
Query: 153 WNPRGKIGLRLGLYGCPYKAD-ILYFDGD--DAISYRFPRGVSRSLWDVFAFSFKTEEKD 209
WN + G G +G D +FDG + P V++ + F T +
Sbjct: 2285 WNYIEREGKCRGCFGSSQNEDPSFHFDGSGYSVVEKSLPATVTQII-----MLFNTFSPN 2339
Query: 210 GLLLHAEGAQG--DYVTLELEGAHLLLHMSLGSSPIQPRPGHTTVSAGGVLNDQHWHYVR 267
GLLL+ G+ G D++++EL + + LGS PI T+ N+ W+ +
Sbjct: 2340 GLLLYL-GSYGTKDFLSIELFRGRVKVMTDLGSGPI-------TLLTDRRYNNGTWYKIA 2391
Query: 268 VDRFGRD-VNFTLDGYV---------QRFILNGDFERLNLDTEMFIGGLVGA--ARKNLA 315
R + V +D Y + + D RL+ D +++GGL + R+ +
Sbjct: 2392 FQRNRKQGVLAVIDAYNTSNKETKQGETPGASSDLNRLDKDP-IYVGGLPRSRVVRRGVT 2450
Query: 316 YRHNFRGCIENVIFNRVNIADLAVRRHSRITFEGKVAFRCLDPVPHPINF--GGPHNFVQ 373
+ +F GCI+N+ +R + + R+S +G + L+P+ ++F GG +++
Sbjct: 2451 TK-SFVGCIKNLEISR---STFDLLRNSYGVRKGCL----LEPI-RSVSFLKGG---YIE 2498
Query: 374 VPGFPRRGRLAVSFRFRTWDLTGLLLFSRLGD-------GLGHV---ELTLSEGQVNVSI 423
+P F T + +G++L + GD HV + L G + V +
Sbjct: 2499 LPPKSLSPESEWLVTFATTNSSGIILAALGGDVEKRGDREEAHVPFFSVMLIGGNIEVHV 2558
Query: 424 AQSG----RKKLQFAAGYRLNDGFWHEVNFVAQENHAVISIDDVEGAEVRVSYPLLIRT- 478
RK L A +DG H ++ V + +D+ E+++ + RT
Sbjct: 2559 NPGDGTGLRKALLHAPTGTCSDGQAHSISLVRNRRIITVQLDENNPVEMKLGTLVESRTI 2618
Query: 479 -GTSYFFGGCPKPASRWDCHSNQTAFHGCMELLKVDGQLVNLTLVEGRRLGFYAEVLFDT 537
++ + GG P+ + + +FHGC++ L + NL L++ + +V DT
Sbjct: 2619 NVSNLYVGGIPE-GEGTSLLTMRRSFHGCIKNL-----IFNLELLDFNSAVGHEQVDLDT 2672
Query: 538 CGITDR 543
C +++R
Sbjct: 2673 CWLSER 2678
Score = 39.3 bits (90), Expect = 0.026
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 1135 TRPVTDGQPHSINITRVYRNLFIQVDYFPLTEQKFSLLVDSQLDSPKALYLGRVME-TGV 1193
T +DGQ HSI++ R R + +Q+D E K LV+S+ + LY+G + E G
Sbjct: 2575 TGTCSDGQAHSISLVRNRRIITVQLDENNPVEMKLGTLVESRTINVSNLYVGGIPEGEGT 2634
Query: 1194 IDPEIQRYNTPGFSGCLSGVRFN 1216
++R F GC+ + FN
Sbjct: 2635 SLLTMRR----SFHGCIKNLIFN 2653
>gi|10518506 coagulation factor VIII isoform b precursor [Homo
sapiens]
Length = 216
Score = 70.1 bits (170), Expect = 1e-11
Identities = 45/137 (32%), Positives = 68/137 (49%), Gaps = 10/137 (7%)
Query: 40 ASSYYSLLTA---PRFARLH---GISGWSPRIGDPNPWLQIDLMKKHRIRAVATQG--SF 91
ASSY++ + A P ARLH + W P++ +P WLQ+D K ++ V TQG S
Sbjct: 76 ASSYFTNMFATWSPSKARLHLQGRSNAWRPQVNNPKEWLQVDFQKTMKVTGVTTQGVKSL 135
Query: 92 NSWDWVTRYMLLYGDRVDSWTPFYQRGHNSTFFGNVNESAVVRHDLHFHFTARYIRIVPL 151
+ +V +++ WT F+Q G F GN + V + L RY+RI P
Sbjct: 136 LTSMYVKEFLISSSQDGHQWTLFFQNGKVKVFQGNQDSFTPVVNSLDPPLLTRYLRIHPQ 195
Query: 152 AWNPRGKIGLRLGLYGC 168
+W +I LR+ + GC
Sbjct: 196 SW--VHQIALRMEVLGC 210
Score = 32.3 bits (72), Expect = 3.2
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 123 FFGNVNESAVVRHDLHFHFTARYIRIVPLAWNPRGKIGLRLGLYGC 168
FFGNV+ S + + + ARYIR+ P ++ R LR+ L GC
Sbjct: 10 FFGNVDSSGIKHNIFNPPIIARYIRLHPTHYSIRST--LRMELMGC 53
>gi|4503647 coagulation factor VIII isoform a precursor [Homo sapiens]
Length = 2351
Score = 70.1 bits (170), Expect = 1e-11
Identities = 45/137 (32%), Positives = 68/137 (49%), Gaps = 10/137 (7%)
Query: 40 ASSYYSLLTA---PRFARLH---GISGWSPRIGDPNPWLQIDLMKKHRIRAVATQG--SF 91
ASSY++ + A P ARLH + W P++ +P WLQ+D K ++ V TQG S
Sbjct: 2211 ASSYFTNMFATWSPSKARLHLQGRSNAWRPQVNNPKEWLQVDFQKTMKVTGVTTQGVKSL 2270
Query: 92 NSWDWVTRYMLLYGDRVDSWTPFYQRGHNSTFFGNVNESAVVRHDLHFHFTARYIRIVPL 151
+ +V +++ WT F+Q G F GN + V + L RY+RI P
Sbjct: 2271 LTSMYVKEFLISSSQDGHQWTLFFQNGKVKVFQGNQDSFTPVVNSLDPPLLTRYLRIHPQ 2330
Query: 152 AWNPRGKIGLRLGLYGC 168
+W +I LR+ + GC
Sbjct: 2331 SW--VHQIALRMEVLGC 2345
Score = 60.5 bits (145), Expect = 1e-08
Identities = 39/129 (30%), Positives = 70/129 (54%), Gaps = 15/129 (11%)
Query: 49 APRFARLH---GISGWSPRIGDPNPWLQIDLMKKHRIRAVATQGSFNSWD--WVTRYMLL 103
AP+ ARLH I+ WS + +P W+++DL+ I + TQG+ + ++++++++
Sbjct: 2066 APKLARLHYSGSINAWSTK--EPFSWIKVDLLAPMIIHGIKTQGARQKFSSLYISQFIIM 2123
Query: 104 YGDRVDSWTPFYQRGHNS----TFFGNVNESAVVRHDLHFHFTARYIRIVPLAWNPRGKI 159
Y W + RG+++ FFGNV+ S + + + ARYIR+ P ++ R
Sbjct: 2124 YSLDGKKWQTY--RGNSTGTLMVFFGNVDSSGIKHNIFNPPIIARYIRLHPTHYSIRST- 2180
Query: 160 GLRLGLYGC 168
LR+ L GC
Sbjct: 2181 -LRMELMGC 2188
>gi|105990535 coagulation factor V precursor [Homo sapiens]
Length = 2224
Score = 68.6 bits (166), Expect = 4e-11
Identities = 41/126 (32%), Positives = 66/126 (52%), Gaps = 9/126 (7%)
Query: 50 PRFARLHG---ISGWSPRIGDPNPWLQIDLMKKHRIRAVATQG--SFNSWDWVTRYMLLY 104
P ARL+ ++ W + + WL+IDL+K +I A+ TQG S +S +V Y + Y
Sbjct: 2098 PFRARLNAQGRVNAWQAKANNNKQWLEIDLLKIKKITAIITQGCKSLSSEMYVKSYTIHY 2157
Query: 105 GDRVDSWTPFYQRGH--NSTFFGNVNESAVVRHDLHFHFTARYIRIVPLAWNPRGKIGLR 162
++ W P+ + + F GN N V++ + +R+IR++P WN I LR
Sbjct: 2158 SEQGVEWKPYRLKSSMVDKIFEGNTNTKGHVKNFFNPPIISRFIRVIPKTWNQ--SIALR 2215
Query: 163 LGLYGC 168
L L+GC
Sbjct: 2216 LELFGC 2221
Score = 44.7 bits (104), Expect = 6e-04
Identities = 43/134 (32%), Positives = 62/134 (46%), Gaps = 21/134 (15%)
Query: 50 PRFARLHG---ISGWSPRI----GDPNPWLQIDLMKKHRIRAVATQGS--FNSWDWVTRY 100
PR ARL+ + WS PW+Q+D+ K+ I + TQG+ + + T +
Sbjct: 1934 PRLARLNNGGSYNAWSVEKLAAEFASKPWIQVDMQKEVIITGIQTQGAKHYLKSCYTTEF 1993
Query: 101 MLLYGDRVDSWTPFYQRGHNST-----FFGNVNESAVVRHDLHFHFTARYIRIVPL-AWN 154
+ Y +W F +G NST F GN + S + + ARYIRI P A+N
Sbjct: 1994 YVAYSSNQINWQIF--KG-NSTRNVMYFNGNSDASTIKENQFDPPIVARYIRISPTRAYN 2050
Query: 155 PRGKIGLRLGLYGC 168
+ LRL L GC
Sbjct: 2051 ---RPTLRLELQGC 2061
>gi|10835083 X-linked juvenile retinoschisis protein precursor [Homo
sapiens]
Length = 224
Score = 68.6 bits (166), Expect = 4e-11
Identities = 45/134 (33%), Positives = 73/134 (54%), Gaps = 8/134 (5%)
Query: 43 YYSLLTAPRFARLHGIS---GWSPRIGDPNPWLQIDLMKKHRIRAVATQGSFNSWDWVTR 99
+YS TA + ARL+ W + D + WLQIDL + I + TQG + +W+T+
Sbjct: 92 WYSSWTANK-ARLNSQGFGCAWLSKFQDSSQWLQIDLKEIKVISGILTQGRCDIDEWMTK 150
Query: 100 YMLLYG-DRVDSWTPFY-QRGHNSTFFGNVNESAVVRHDLHFHFTARYIRIVPLAWNPRG 157
Y + Y D +W + Q G+N F+GN + ++ V++ L +R+IR++PL W+ R
Sbjct: 151 YSVQYRTDERLNWIYYKDQTGNNRVFYGNSDRTSTVQNLLRPPIISRFIRLIPLGWHVR- 209
Query: 158 KIGLRLGLYGCPYK 171
I +R+ L C K
Sbjct: 210 -IAIRMELLECVSK 222
>gi|223005864 carboxypeptidase X (M14 family), member 2 [Homo
sapiens]
Length = 756
Score = 68.2 bits (165), Expect = 5e-11
Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 2/111 (1%)
Query: 61 WSPRIGDPNPWLQIDLMKKHRIRAVATQGSFNSW--DWVTRYMLLYGDRVDSWTPFYQRG 118
W D W+++D + R V TQG + W DWVT Y ++ + +W
Sbjct: 184 WCAGRNDLQQWIEVDARRLTRFTGVITQGRNSLWLSDWVTSYKVMVSNDSHTWVTVKNGS 243
Query: 119 HNSTFFGNVNESAVVRHDLHFHFTARYIRIVPLAWNPRGKIGLRLGLYGCP 169
+ F GN + V ++L ARYIRI P +W G I +R+ + GCP
Sbjct: 244 GDMIFEGNSEKEIPVLNELPVPMVARYIRINPQSWFDNGSICMRMEILGCP 294
>gi|126012571 heparan sulfate proteoglycan 2 [Homo sapiens]
Length = 4391
Score = 67.8 bits (164), Expect = 7e-11
Identities = 112/466 (24%), Positives = 184/466 (39%), Gaps = 73/466 (15%)
Query: 793 GAALRFPPI-RANHSLDVSFYFRTSAPSGVFLENMG--GPYCQWRRPYVRVELNTSRDVV 849
G+ L P + +H L + F+ AP GV L + G GP +V + + +
Sbjct: 3936 GSYLALPALTNTHHELRLDVEFKPLAPDGVLLFSGGKSGPV----EDFVSLAM-VGGHLE 3990
Query: 850 FAFDVGNGDENLTVHSDDFEFNDDEWHLVRAEINVKQARLRVDHRPWVLRPMP------- 902
F +++G+G L V WH V AE K LRV+ VLR P
Sbjct: 3991 FRYELGSG---LAVLRSAEPLALGRWHRVSAERLNKDGSLRVNGGRPVLRSSPGKSQGLN 4047
Query: 903 LQTYIWMEYDQP-LYVGSAELKRRPFVGCLRAMRLNGVTLNLEGRANASEGTSPNCTGHC 961
L T +++ +P + + A F GC+ + +NG L+L S+G C
Sbjct: 4048 LHTLLYLGGVEPSVPLSPATNMSAHFRGCVGEVSVNGKRLDLTYSFLGSQGIG-QCYDSS 4106
Query: 962 AHPRLPCFHGGRCVERYSY-YTCDCDLTAFDGPYCNHDIGGFFEPGTWMRYNLQSALRSA 1020
R PC HG C+ Y + C C F G C H+ E +R + L
Sbjct: 4107 PCERQPCQHGATCMPAGEYEFQCLC-RDGFKGDLCEHE-----ENPCQLR---EPCLHGG 4157
Query: 1021 AREFSHMLSRPVPGYEPGYIPGYDTPGYVPGYHGPGYRLPDY---PRPGRPVPGYRGPVY 1077
+ + L +PG+ P G G G D+ G PG G +
Sbjct: 4158 TCQGTRCLC----------LPGFSGPRCQQG-SGHGIAESDWHLEGSGGNDAPGQYGAYF 4206
Query: 1078 NVTG-----------------EEVSFSFSTSSAPAVLLYVSSFV------RDYMAVLIKD 1114
+ G E + TS+A +LL+ V +D++++ ++
Sbjct: 4207 HDDGFLAFPGHVFSRSLPEVPETIELEVRTSTASGLLLWQGVEVGEAGQGKDFISLGLQ- 4265
Query: 1115 DGTLQLRYQLGTSPYVYQLTTRPVTDGQPHSINITRVYRNLFIQVDYFPLTEQKFSLLVD 1174
DG L RYQLG S ++ P+ DG+ H + R R IQVD L + S +
Sbjct: 4266 DGHLVFRYQLG-SGEARLVSEDPINDGEWHRVTALREGRRGSIQVDGEELVSGR-SPGPN 4323
Query: 1175 SQLDSPKALYLGRVMETGVIDPEIQRYNTPGFSGCLSGVRFNNVAP 1220
+++ ++Y+G + + R+++ G +GC+ + ++ P
Sbjct: 4324 VAVNAKGSVYIGGAPDVATLTG--GRFSS-GITGCVKNLVLHSARP 4366
Score = 48.5 bits (114), Expect = 4e-05
Identities = 41/136 (30%), Positives = 63/136 (46%), Gaps = 17/136 (12%)
Query: 203 FKTEEKDGLLLHAEGAQG---DYVTLELEGAHLLLHMSLGSSPIQPRPGHTTVSAGGVLN 259
FK DG+LL + G G D+V+L + G HL LGS G + + L
Sbjct: 3957 FKPLAPDGVLLFSGGKSGPVEDFVSLAMVGGHLEFRYELGS-------GLAVLRSAEPLA 4009
Query: 260 DQHWHYVRVDRFGRDVNFTLDGYVQRFILN---GDFERLNLDTEMFIGGLVGAARKNLA- 315
WH V +R +D + ++G R +L G + LNL T +++GG+ + + A
Sbjct: 4010 LGRWHRVSAERLNKDGSLRVNG--GRPVLRSSPGKSQGLNLHTLLYLGGVEPSVPLSPAT 4067
Query: 316 -YRHNFRGCIENVIFN 330
+FRGC+ V N
Sbjct: 4068 NMSAHFRGCVGEVSVN 4083
Score = 44.3 bits (103), Expect = 8e-04
Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 25/169 (14%)
Query: 176 YFDGDDAISYRFPRGV-SRSLWDV---FAFSFKTEEKDGLLLH-----AEGAQG-DYVTL 225
YF D ++ FP V SRSL +V +T GLLL E QG D+++L
Sbjct: 4205 YFHDDGFLA--FPGHVFSRSLPEVPETIELEVRTSTASGLLLWQGVEVGEAGQGKDFISL 4262
Query: 226 ELEGAHLLLHMSLGSSPIQPRPGHTTVSAGGVLNDQHWHYVRVDRFGRDVNFTLDGYVQR 285
L+ HL+ LGS G + + +ND WH V R GR + +DG +
Sbjct: 4263 GLQDGHLVFRYQLGS-------GEARLVSEDPINDGEWHRVTALREGRRGSIQVDG--EE 4313
Query: 286 FILN---GDFERLNLDTEMFIGGLVGAAR-KNLAYRHNFRGCIENVIFN 330
+ G +N ++IGG A + GC++N++ +
Sbjct: 4314 LVSGRSPGPNVAVNAKGSVYIGGAPDVATLTGGRFSSGITGCVKNLVLH 4362
Score = 37.7 bits (86), Expect = 0.077
Identities = 30/114 (26%), Positives = 48/114 (42%), Gaps = 7/114 (6%)
Query: 385 VSFRFRTWDLTGLLLFSRL-----GDGLGHVELTLSEGQVNVSIAQSGRKKLQFAAGYRL 439
+ RT +GLLL+ + G G + L L +G + V Q G + + + +
Sbjct: 4230 IELEVRTSTASGLLLWQGVEVGEAGQGKDFISLGLQDGHL-VFRYQLGSGEARLVSEDPI 4288
Query: 440 NDGFWHEVNFVAQENHAVISIDDVEGAEVRVSYP-LLIRTGTSYFFGGCPKPAS 492
NDG WH V + + I +D E R P + + S + GG P A+
Sbjct: 4289 NDGEWHRVTALREGRRGSIQVDGEELVSGRSPGPNVAVNAKGSVYIGGAPDVAT 4342
Score = 37.4 bits (85), Expect = 0.10
Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 8/73 (10%)
Query: 927 FVGCLRAMRLNGVTLNLEGRANASEGTSPNCTGHCAHPR-LPCFHGGRCVE-RYSYYTCD 984
F+GC+R +R+ G + + G S HC R PC +GG+C + S Y C
Sbjct: 3816 FIGCVRELRIQGEEIVFHDLNLTAHGIS-----HCPTCRDRPCQNGGQCHDSESSSYVCV 3870
Query: 985 CDLTAFDGPYCNH 997
C F G C H
Sbjct: 3871 CP-AGFTGSRCEH 3882
Score = 33.1 bits (74), Expect = 1.9
Identities = 47/188 (25%), Positives = 76/188 (40%), Gaps = 27/188 (14%)
Query: 790 FHTGAALRFPPIRANHSLD-----VSFYFRTSAPSGVFL-ENMGGPYCQWRRPYVRVELN 843
FH L FP + SL + RTS SG+ L + + + ++ + L
Sbjct: 4206 FHDDGFLAFPGHVFSRSLPEVPETIELEVRTSTASGLLLWQGVEVGEAGQGKDFISLGLQ 4265
Query: 844 TSRDVVFAFDVGNGDENLTVHSDDFEFNDDEWHLVRAEINVKQARLRVDHRPWVLRPMPL 903
+VF + +G+G+ L S+D ND EWH V A ++ ++VD V P
Sbjct: 4266 DGH-LVFRYQLGSGEARLV--SED-PINDGEWHRVTALREGRRGSIQVDGEELVSGRSP- 4320
Query: 904 QTYIWMEYDQPLYVGS----AELKRRPF----VGCLRAMRLNGV--------TLNLEGRA 947
+ + +Y+G A L F GC++ + L+ L+L+ RA
Sbjct: 4321 GPNVAVNAKGSVYIGGAPDVATLTGGRFSSGITGCVKNLVLHSARPGAPPPQPLDLQHRA 4380
Query: 948 NASEGTSP 955
A T P
Sbjct: 4381 QAGANTRP 4388
>gi|239758135 PREDICTED: similar to cell recognition molecule CASPR3
[Homo sapiens]
Length = 140
Score = 67.0 bits (162), Expect = 1e-10
Identities = 35/113 (30%), Positives = 68/113 (60%), Gaps = 4/113 (3%)
Query: 1079 VTGEEVSFSFSTSSAPAVLLYVSSFVRDYMAVLIKDDGTLQLRYQLG--TSPYVYQLTTR 1136
+T E ++ SF T+ P++LLYVSSF +Y++V++ ++G+LQ+RY+L +P + +
Sbjct: 28 LTREMITLSFRTTRTPSLLLYVSSFYEEYLSVILANNGSLQIRYKLDRHQNPDAFTFDFK 87
Query: 1137 PVTDGQPHSINITRVYRNLFIQVDYFPLTEQKFSLLVDSQLDSPKALYLGRVM 1189
+ DGQ H + I R + V+ +++ L ++ ++ K+L LG+V+
Sbjct: 88 NMADGQLHQVKINR--EEAVVMVEVNQSAKKQVILSSGTEFNAVKSLILGKVL 138
>gi|41872572 neuropilin 2 isoform 3 precursor [Homo sapiens]
Length = 909
Score = 65.9 bits (159), Expect = 3e-10
Identities = 45/144 (31%), Positives = 71/144 (49%), Gaps = 8/144 (5%)
Query: 31 GPLYARSLGASSYYSL-LTAPRFARLHGI-SGWSPRIGDPNPWLQIDLMKKHRIRAVATQ 88
G + + ASS YS P+ +RLHG +GW+P + +LQ+DL + A+ATQ
Sbjct: 286 GRIANEQISASSTYSDGRWTPQQSRLHGDDNGWTPNLDSNKEYLQVDLRFLTMLTAIATQ 345
Query: 89 GSFN----SWDWVTRYMLLYGDRVDSWTPFYQRGHNSTFFGNVNESAVVRHDLHFHFTAR 144
G+ + + +V Y L + W + ++ F N + + VV + LH R
Sbjct: 346 GAISRETQNGYYVKSYKLEVSTNGEDWMVYRHGKNHKVFQANNDATEVVLNKLHAPLLTR 405
Query: 145 YIRIVPLAWNPRGKIGLRLGLYGC 168
++RI P W+ I LRL L+GC
Sbjct: 406 FVRIRPQTWH--SGIALRLELFGC 427
Score = 52.0 bits (123), Expect = 4e-06
Identities = 46/158 (29%), Positives = 69/158 (43%), Gaps = 20/158 (12%)
Query: 29 LVGPLYARSLGASSYYSLLTAPRFARL-HGISGWSPRIGDPNP---WLQIDLMKKHRIRA 84
L G + + ASS L +P ARL SGW PRI P WLQ+DL ++
Sbjct: 441 LSGLIADSQISASSTQEYLWSPSAARLVSSRSGWFPRIPQAQPGEEWLQVDLGTPKTVKG 500
Query: 85 VATQGS--------FNSWDWVTRYMLLYGDRVDSWTPFY--QRGHNSTFFGNVNESA--V 132
V QG+ + +V ++ + Y W + F GN++ +
Sbjct: 501 VIIQGARGGDSITAVEARAFVRKFKVSYSLNGKDWEYIQDPRTQQPKLFEGNMHYDTPDI 560
Query: 133 VRHDLHFHFTARYIRIVPLAWNPRGKIGLRLGLYGCPY 170
R D A+Y+R+ P W+P G IG+RL + GC +
Sbjct: 561 RRFD---PIPAQYVRVYPERWSPAG-IGMRLEVLGCDW 594
>gi|41872567 neuropilin 2 isoform 5 precursor [Homo sapiens]
Length = 901
Score = 65.9 bits (159), Expect = 3e-10
Identities = 45/144 (31%), Positives = 71/144 (49%), Gaps = 8/144 (5%)
Query: 31 GPLYARSLGASSYYSL-LTAPRFARLHGI-SGWSPRIGDPNPWLQIDLMKKHRIRAVATQ 88
G + + ASS YS P+ +RLHG +GW+P + +LQ+DL + A+ATQ
Sbjct: 286 GRIANEQISASSTYSDGRWTPQQSRLHGDDNGWTPNLDSNKEYLQVDLRFLTMLTAIATQ 345
Query: 89 GSFN----SWDWVTRYMLLYGDRVDSWTPFYQRGHNSTFFGNVNESAVVRHDLHFHFTAR 144
G+ + + +V Y L + W + ++ F N + + VV + LH R
Sbjct: 346 GAISRETQNGYYVKSYKLEVSTNGEDWMVYRHGKNHKVFQANNDATEVVLNKLHAPLLTR 405
Query: 145 YIRIVPLAWNPRGKIGLRLGLYGC 168
++RI P W+ I LRL L+GC
Sbjct: 406 FVRIRPQTWH--SGIALRLELFGC 427
Score = 52.0 bits (123), Expect = 4e-06
Identities = 46/158 (29%), Positives = 69/158 (43%), Gaps = 20/158 (12%)
Query: 29 LVGPLYARSLGASSYYSLLTAPRFARL-HGISGWSPRIGDPNP---WLQIDLMKKHRIRA 84
L G + + ASS L +P ARL SGW PRI P WLQ+DL ++
Sbjct: 441 LSGLIADSQISASSTQEYLWSPSAARLVSSRSGWFPRIPQAQPGEEWLQVDLGTPKTVKG 500
Query: 85 VATQGS--------FNSWDWVTRYMLLYGDRVDSWTPFY--QRGHNSTFFGNVNESA--V 132
V QG+ + +V ++ + Y W + F GN++ +
Sbjct: 501 VIIQGARGGDSITAVEARAFVRKFKVSYSLNGKDWEYIQDPRTQQPKLFEGNMHYDTPDI 560
Query: 133 VRHDLHFHFTARYIRIVPLAWNPRGKIGLRLGLYGCPY 170
R D A+Y+R+ P W+P G IG+RL + GC +
Sbjct: 561 RRFD---PIPAQYVRVYPERWSPAG-IGMRLEVLGCDW 594
>gi|41872562 neuropilin 2 isoform 1 precursor [Homo sapiens]
Length = 931
Score = 65.9 bits (159), Expect = 3e-10
Identities = 45/144 (31%), Positives = 71/144 (49%), Gaps = 8/144 (5%)
Query: 31 GPLYARSLGASSYYSL-LTAPRFARLHGI-SGWSPRIGDPNPWLQIDLMKKHRIRAVATQ 88
G + + ASS YS P+ +RLHG +GW+P + +LQ+DL + A+ATQ
Sbjct: 286 GRIANEQISASSTYSDGRWTPQQSRLHGDDNGWTPNLDSNKEYLQVDLRFLTMLTAIATQ 345
Query: 89 GSFN----SWDWVTRYMLLYGDRVDSWTPFYQRGHNSTFFGNVNESAVVRHDLHFHFTAR 144
G+ + + +V Y L + W + ++ F N + + VV + LH R
Sbjct: 346 GAISRETQNGYYVKSYKLEVSTNGEDWMVYRHGKNHKVFQANNDATEVVLNKLHAPLLTR 405
Query: 145 YIRIVPLAWNPRGKIGLRLGLYGC 168
++RI P W+ I LRL L+GC
Sbjct: 406 FVRIRPQTWH--SGIALRLELFGC 427
Score = 52.0 bits (123), Expect = 4e-06
Identities = 46/158 (29%), Positives = 69/158 (43%), Gaps = 20/158 (12%)
Query: 29 LVGPLYARSLGASSYYSLLTAPRFARL-HGISGWSPRIGDPNP---WLQIDLMKKHRIRA 84
L G + + ASS L +P ARL SGW PRI P WLQ+DL ++
Sbjct: 441 LSGLIADSQISASSTQEYLWSPSAARLVSSRSGWFPRIPQAQPGEEWLQVDLGTPKTVKG 500
Query: 85 VATQGS--------FNSWDWVTRYMLLYGDRVDSWTPFY--QRGHNSTFFGNVNESA--V 132
V QG+ + +V ++ + Y W + F GN++ +
Sbjct: 501 VIIQGARGGDSITAVEARAFVRKFKVSYSLNGKDWEYIQDPRTQQPKLFEGNMHYDTPDI 560
Query: 133 VRHDLHFHFTARYIRIVPLAWNPRGKIGLRLGLYGCPY 170
R D A+Y+R+ P W+P G IG+RL + GC +
Sbjct: 561 RRFD---PIPAQYVRVYPERWSPAG-IGMRLEVLGCDW 594
>gi|41872557 neuropilin 2 isoform 6 precursor [Homo sapiens]
Length = 555
Score = 65.9 bits (159), Expect = 3e-10
Identities = 45/144 (31%), Positives = 71/144 (49%), Gaps = 8/144 (5%)
Query: 31 GPLYARSLGASSYYSL-LTAPRFARLHGI-SGWSPRIGDPNPWLQIDLMKKHRIRAVATQ 88
G + + ASS YS P+ +RLHG +GW+P + +LQ+DL + A+ATQ
Sbjct: 286 GRIANEQISASSTYSDGRWTPQQSRLHGDDNGWTPNLDSNKEYLQVDLRFLTMLTAIATQ 345
Query: 89 GSFN----SWDWVTRYMLLYGDRVDSWTPFYQRGHNSTFFGNVNESAVVRHDLHFHFTAR 144
G+ + + +V Y L + W + ++ F N + + VV + LH R
Sbjct: 346 GAISRETQNGYYVKSYKLEVSTNGEDWMVYRHGKNHKVFQANNDATEVVLNKLHAPLLTR 405
Query: 145 YIRIVPLAWNPRGKIGLRLGLYGC 168
++RI P W+ I LRL L+GC
Sbjct: 406 FVRIRPQTWH--SGIALRLELFGC 427
Score = 37.7 bits (86), Expect = 0.077
Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Query: 29 LVGPLYARSLGASSYYSLLTAPRFARL-HGISGWSPRIGDPNP---WLQIDLMKKHRIRA 84
L G + + ASS L +P ARL SGW PRI P WLQ+DL ++
Sbjct: 441 LSGLIADSQISASSTQEYLWSPSAARLVSSRSGWFPRIPQAQPGEEWLQVDLGTPKTVKG 500
Query: 85 VATQGS 90
V QG+
Sbjct: 501 VIIQGA 506
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.140 0.459
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,838,427
Number of Sequences: 37866
Number of extensions: 3243804
Number of successful extensions: 30011
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 343
Number of HSP's successfully gapped in prelim test: 401
Number of HSP's that attempted gapping in prelim test: 18853
Number of HSP's gapped (non-prelim): 8197
length of query: 1384
length of database: 18,247,518
effective HSP length: 115
effective length of query: 1269
effective length of database: 13,892,928
effective search space: 17630125632
effective search space used: 17630125632
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.