Search of human proteins with 12751491

Search of human proteins with 12751491

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|12751491 hypothetical protein LOC65260 [Homo sapiens]
         (231 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|12751491 hypothetical protein LOC65260 [Homo sapiens]              491   e-139
gi|151301150 sel-1 suppressor of lin-12-like 2 [Homo sapiens]          49   3e-06
gi|19923669 sel-1 suppressor of lin-12-like [Homo sapiens]             42   3e-04
gi|33620759 LRP2 binding protein [Homo sapiens]                        38   0.008
gi|111118994 brain-specific angiogenesis inhibitor 1 precursor [...    33   0.21 
gi|38570062 hypothetical protein LOC51608 [Homo sapiens]               30   1.7  
gi|38044290 zinc finger, CCHC domain containing 8 [Homo sapiens]       29   3.0  
gi|13129068 nucleolar complex associated 4 homolog [Homo sapiens]      29   3.9  
gi|33946313 ninein isoform 4 [Homo sapiens]                            29   3.9  
gi|33946321 ninein isoform 5 [Homo sapiens]                            29   3.9  
gi|148536871 ninein isoform 1 [Homo sapiens]                           29   3.9  
gi|148536869 ninein isoform 2 [Homo sapiens]                           29   3.9  
gi|6005902 thrombospondin 3 precursor [Homo sapiens]                   29   3.9  
gi|215598688 ubiquitin thiolesterase 13 [Homo sapiens]                 28   5.1  
gi|218505670 epithelial cell adhesion molecule precursor [Homo s...    28   6.6  
gi|91199540 dihydrolipoamide dehydrogenase precursor [Homo sapiens]    28   6.6  
gi|55769548 PHD finger protein 14 isoform 2 [Homo sapiens]             28   6.6  
gi|55769550 PHD finger protein 14 isoform 1 [Homo sapiens]             28   6.6  
gi|110626177 zinc finger protein 699 [Homo sapiens]                    28   8.7  

>gi|12751491 hypothetical protein LOC65260 [Homo sapiens]
          Length = 231

 Score =  491 bits (1265), Expect = e-139
 Identities = 231/231 (100%), Positives = 231/231 (100%)

Query: 1   MAGMVDFQDEEQVKSFLENMEVECNYHCYHEKDPDGCYRLVDYLEGIRKNFDEAAKVLKF 60
           MAGMVDFQDEEQVKSFLENMEVECNYHCYHEKDPDGCYRLVDYLEGIRKNFDEAAKVLKF
Sbjct: 1   MAGMVDFQDEEQVKSFLENMEVECNYHCYHEKDPDGCYRLVDYLEGIRKNFDEAAKVLKF 60

Query: 61  NCEENQHSDSCYKLGAHYVTGKGGLTQDLKAAARCFLMACEKPGKKSIAACHNVGLLAHD 120
           NCEENQHSDSCYKLGAHYVTGKGGLTQDLKAAARCFLMACEKPGKKSIAACHNVGLLAHD
Sbjct: 61  NCEENQHSDSCYKLGAHYVTGKGGLTQDLKAAARCFLMACEKPGKKSIAACHNVGLLAHD 120

Query: 121 GQVNEDGQPDLGKARDYYTRACDGGYTSSCFNLSAMFLQGAPGFPKDMDLACKYSMKACD 180
           GQVNEDGQPDLGKARDYYTRACDGGYTSSCFNLSAMFLQGAPGFPKDMDLACKYSMKACD
Sbjct: 121 GQVNEDGQPDLGKARDYYTRACDGGYTSSCFNLSAMFLQGAPGFPKDMDLACKYSMKACD 180

Query: 181 LGHIWACANASRMYKLGDGVDKDEAKAEVLKNRAQQLHREQQKGVQPLTFG 231
           LGHIWACANASRMYKLGDGVDKDEAKAEVLKNRAQQLHREQQKGVQPLTFG
Sbjct: 181 LGHIWACANASRMYKLGDGVDKDEAKAEVLKNRAQQLHREQQKGVQPLTFG 231


>gi|151301150 sel-1 suppressor of lin-12-like 2 [Homo sapiens]
          Length = 688

 Score = 49.3 bits (116), Expect = 3e-06
 Identities = 39/128 (30%), Positives = 58/128 (45%), Gaps = 9/128 (7%)

Query: 74  LGAHYVTGKGGLTQDLKAAARCFLMACEKPGKKSIAACHNVGLLAHDGQVNEDGQP-DLG 132
           +G  Y+ G   + Q+   A + F MA  K     +   H +GLL   G+    G P +  
Sbjct: 340 IGKMYLEGNAAVPQNNATAFKYFSMAASKGNAIGL---HGLGLLYFHGK----GVPLNYA 392

Query: 133 KARDYYTRACDGGYTSSCFNLSAMFLQGAPGFPKDMDLACKYSMKACDLGHIWACANASR 192
           +A  Y+ +A + G+  + F L  M+  G+ G  KD  LA KY   A   G   A    ++
Sbjct: 393 EALKYFQKAAEKGWPDAQFQLGFMYYSGS-GIWKDYKLAFKYFYLASQSGQPLAIYYLAK 451

Query: 193 MYKLGDGV 200
           MY  G GV
Sbjct: 452 MYATGTGV 459



 Score = 38.1 bits (87), Expect = 0.006
 Identities = 36/130 (27%), Positives = 53/130 (40%), Gaps = 6/130 (4%)

Query: 74  LGAHYVTGKGGLTQDLKAAARCFLMACEKPGKKSIAACHNVGLLAHDGQVNEDGQPDLGK 133
           LG  ++ G+ GL QD   A   FL A +     ++A    +G +  +G  N     +   
Sbjct: 303 LGQLHLIGRKGLDQDYYKALHYFLKAAKAGSANAMAF---IGKMYLEG--NAAVPQNNAT 357

Query: 134 ARDYYTRACDGGYTSSCFNLSAMFLQGAPGFPKDMDLACKYSMKACDLGHIWACANASRM 193
           A  Y++ A   G       L  ++  G  G P +   A KY  KA + G   A      M
Sbjct: 358 AFKYFSMAASKGNAIGLHGLGLLYFHGK-GVPLNYAEALKYFQKAAEKGWPDAQFQLGFM 416

Query: 194 YKLGDGVDKD 203
           Y  G G+ KD
Sbjct: 417 YYSGSGIWKD 426


>gi|19923669 sel-1 suppressor of lin-12-like [Homo sapiens]
          Length = 794

 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 45/169 (26%), Positives = 65/169 (38%), Gaps = 11/169 (6%)

Query: 46  GIRKNFDEAAKVLKFNCEENQ-HSDSCYKLGAHYVTGKGGLTQDLKAAARCFLMACEKPG 104
           G+ +N   A     FN   N  +S +   LG  Y  G   + Q  + A   F  A +   
Sbjct: 389 GVEQNHQRAFDY--FNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 446

Query: 105 KKSIAACHNVGLLAHDGQVNEDGQPDLGKARDYYTRACDGGYTSSCFNLSAMFLQGAPGF 164
               +      L     QVN D       A  Y+ +A + G+      L +M+  G  G 
Sbjct: 447 PVGQSGLGMAYLYGRGVQVNYD------LALKYFQKAAEQGWVDGQLQLGSMYYNGI-GV 499

Query: 165 PKDMDLACKYSMKACDLGHIWACANASRMYKLGDGVDKD-EAKAEVLKN 212
            +D   A KY   A   GHI A  N ++M+  G GV +      E+ KN
Sbjct: 500 KRDYKQALKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKN 548



 Score = 37.0 bits (84), Expect = 0.014
 Identities = 39/147 (26%), Positives = 61/147 (41%), Gaps = 14/147 (9%)

Query: 74  LGAHYVTGKGGLTQDLKAAARCFLMACEKPGKKSIAACHNVGLLAHDGQVNEDGQPDLGK 133
           LG  ++ G  G+ Q+ + A   F +A         A   N   +A  G++  +G   + +
Sbjct: 379 LGQLHLHGGRGVEQNHQRAFDYFNLA---------ANAGNSHAMAFLGKMYSEGSDIVPQ 429

Query: 134 ARD----YYTRACDGGYTSSCFNLSAMFLQGAPGFPKDMDLACKYSMKACDLGHIWACAN 189
           + +    Y+ +A D G       L   +L G  G   + DLA KY  KA + G +     
Sbjct: 430 SNETALHYFKKAADMGNPVGQSGLGMAYLYGR-GVQVNYDLALKYFQKAAEQGWVDGQLQ 488

Query: 190 ASRMYKLGDGVDKDEAKAEVLKNRAQQ 216
              MY  G GV +D  +A    N A Q
Sbjct: 489 LGSMYYNGIGVKRDYKQALKYFNLASQ 515


>gi|33620759 LRP2 binding protein [Homo sapiens]
          Length = 347

 Score = 37.7 bits (86), Expect = 0.008
 Identities = 37/159 (23%), Positives = 66/159 (41%), Gaps = 9/159 (5%)

Query: 63  EENQHSDSCYKLGAHYVTGKGGLTQDLKAA---ARCFLMACEKPGKKSIAACHNVGLLAH 119
           +E  H  + Y+LG  Y  G G      K      +     C K      AA +N+G   +
Sbjct: 86  KEKDHQ-ATYQLGVMYYDGLGTTLDAEKGVDYMKKILDSPCPKARHLKFAAAYNLGRAYY 144

Query: 120 DGQVNEDGQPDLGKARDYYTRACDGGYTSSCFNLSAMF-LQGAPGFPKDMDLACKYSMKA 178
           +G+  +    +   A   +  A D G   +     +M  L  +   PK+++ A  +  +A
Sbjct: 145 EGKGVKRSNEE---AERLWLIAADNGNPKASVKAQSMLGLYYSTKEPKELEKAFYWHSEA 201

Query: 179 CDLGHIWACANASRMYKLGDGVDKD-EAKAEVLKNRAQQ 216
           C  G++ +      MY  G G+ +D EA  + L+  A++
Sbjct: 202 CGNGNLESQGALGLMYLYGQGIRQDTEAALQCLREAAER 240


>gi|111118994 brain-specific angiogenesis inhibitor 1 precursor [Homo
            sapiens]
          Length = 1584

 Score = 33.1 bits (74), Expect = 0.21
 Identities = 31/137 (22%), Positives = 53/137 (38%), Gaps = 19/137 (13%)

Query: 38   YRLVDYLEG---------IRKNFDEAAKVLKFNCEENQHSDSCYKLGAHYVTGKGGLTQD 88
            + + D LEG         +R+   +A K    + +E  + DS    G  +  G   L  D
Sbjct: 1169 FAVFDSLEGFVIVMVHCILRREVQDAVKCRVVDRQEEGNGDS----GGSFQNGHAQLMTD 1224

Query: 89   LKAAARCFLMACEKPGKKSIAACHNVGLLAHDGQVNEDGQPDLGKARDYYTRACDGGYTS 148
             +       +AC     K IAAC    +    G +     P+  K +  + +     + S
Sbjct: 1225 FEKDVD---LACRSVLNKDIAACRTATIT---GTLKRPSLPEEEKLKLAHAKGPPTNFNS 1278

Query: 149  SCFNLSAMFLQGAPGFP 165
               N+S + L G+P +P
Sbjct: 1279 LPANVSKLHLHGSPRYP 1295


>gi|38570062 hypothetical protein LOC51608 [Homo sapiens]
          Length = 327

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 5/53 (9%)

Query: 23  ECNYHCYHEKDPDGCYR-LVDY--LEGIRKNFD--EAAKVLKFNCEENQHSDS 70
           E  YH  H  D +GC   LV+Y    G R   D   A  VL+F C +N+ S S
Sbjct: 161 ESRYHFLHSADGEGCANMLVEYSTSRGFRSEVDMFVAQAVLQFLCLKNKSSAS 213


>gi|38044290 zinc finger, CCHC domain containing 8 [Homo sapiens]
          Length = 707

 Score = 29.3 bits (64), Expect = 3.0
 Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 3/84 (3%)

Query: 103 PGKKSIAACHNVGLLAHDGQVNEDGQPDLGKARDYYTRACDGGYTSSCFNLSAMFLQGAP 162
           PG    A   N GL  +DG+   DG+ ++G+ +   +   D    S   N     +    
Sbjct: 320 PGWLKEAELENSGLALYDGKDGTDGETEVGEIQQNKSVTYD---LSKLVNYPGFNISTPR 376

Query: 163 GFPKDMDLACKYSMKACDLGHIWA 186
           G P +  +     M+AC    ++A
Sbjct: 377 GIPDEWRIFGSIPMQACQQKDVFA 400


>gi|13129068 nucleolar complex associated 4 homolog [Homo sapiens]
          Length = 516

 Score = 28.9 bits (63), Expect = 3.9
 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%)

Query: 105 KKSIAACHNVGLLAHDGQVNEDGQPDLGKARDYYTRACDGGYTSSCFNLSAMFL 158
           K  ++    V L+ HD  + +  QP L    D+ TRACD G   S   L+ +F+
Sbjct: 263 KLPLSLYKKVLLIVHDAILPQLAQPTL--MIDFLTRACDLGGALSLLALNGLFI 314


>gi|33946313 ninein isoform 4 [Homo sapiens]
          Length = 2096

 Score = 28.9 bits (63), Expect = 3.9
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 17  LENMEVECNYHCYHEKDPDGCYRLVDYLEGIRKN 50
           L+N++ E     +H  DPDG   + D+  G+ KN
Sbjct: 222 LQNVDGEMLEEVFHNLDPDGTMSVEDFFYGLFKN 255


>gi|33946321 ninein isoform 5 [Homo sapiens]
          Length = 2090

 Score = 28.9 bits (63), Expect = 3.9
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 17  LENMEVECNYHCYHEKDPDGCYRLVDYLEGIRKN 50
           L+N++ E     +H  DPDG   + D+  G+ KN
Sbjct: 216 LQNVDGEMLEEVFHNLDPDGTMSVEDFFYGLFKN 249


>gi|148536871 ninein isoform 1 [Homo sapiens]
          Length = 2046

 Score = 28.9 bits (63), Expect = 3.9
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 17  LENMEVECNYHCYHEKDPDGCYRLVDYLEGIRKN 50
           L+N++ E     +H  DPDG   + D+  G+ KN
Sbjct: 216 LQNVDGEMLEEVFHNLDPDGTMSVEDFFYGLFKN 249


>gi|148536869 ninein isoform 2 [Homo sapiens]
          Length = 2133

 Score = 28.9 bits (63), Expect = 3.9
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 17  LENMEVECNYHCYHEKDPDGCYRLVDYLEGIRKN 50
           L+N++ E     +H  DPDG   + D+  G+ KN
Sbjct: 216 LQNVDGEMLEEVFHNLDPDGTMSVEDFFYGLFKN 249


>gi|6005902 thrombospondin 3 precursor [Homo sapiens]
          Length = 956

 Score = 28.9 bits (63), Expect = 3.9
 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 4/44 (9%)

Query: 6   DFQDEEQVKSFLENMEVECNYHCYHEK----DPDGCYRLVDYLE 45
           D +D+ +  S + N  +EC    +HE+     P+ C+R VD +E
Sbjct: 248 DIRDQVKEMSLIRNTIMECQVCGFHEQRSHCSPNPCFRGVDCME 291


>gi|215598688 ubiquitin thiolesterase 13 [Homo sapiens]
          Length = 863

 Score = 28.5 bits (62), Expect = 5.1
 Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 5/45 (11%)

Query: 191 SRMYKLGDGV-----DKDEAKAEVLKNRAQQLHREQQKGVQPLTF 230
           ++M KLG G+      K   K+E+++   ++ H+ QQ G+ P  F
Sbjct: 385 TQMTKLGHGLLSGQYSKPPVKSELIEQVMKEEHKPQQNGISPRMF 429


>gi|218505670 epithelial cell adhesion molecule precursor [Homo
           sapiens]
          Length = 314

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 12/85 (14%)

Query: 90  KAAARCFLMACEKPGKKSIAACHNVGLLAHDGQVNEDG--QPDLGKARDYYTRACDGGYT 147
           K AA+C +M  E  G K        G L      N DG   PD  ++  +  + C+G  T
Sbjct: 61  KLAAKCLVMKAEMNGSKLGRRAKPEGALQ-----NNDGLYDPDCDESGLFKAKQCNG--T 113

Query: 148 SSCFNLSAMFLQGAPGFPKDMDLAC 172
           S C+ ++     G     KD ++ C
Sbjct: 114 SMCWCVNT---AGVRRTDKDTEITC 135


>gi|91199540 dihydrolipoamide dehydrogenase precursor [Homo sapiens]
          Length = 509

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 15/64 (23%), Positives = 26/64 (40%)

Query: 80  TGKGGLTQDLKAAARCFLMACEKPGKKSIAACHNVGLLAHDGQVNEDGQPDLGKARDYYT 139
           +G GG    +KAA   F   C +  +     C NVG +     +N      +   +D+ +
Sbjct: 49  SGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGKDFAS 108

Query: 140 RACD 143
           R  +
Sbjct: 109 RGIE 112


>gi|55769548 PHD finger protein 14 isoform 2 [Homo sapiens]
          Length = 888

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 15/63 (23%), Positives = 22/63 (34%), Gaps = 7/63 (11%)

Query: 95  CFLMACEKPGKKSIAACHNVGLLAHDGQVNEDGQPDL-------GKARDYYTRACDGGYT 147
           C  +         I  C N G+  H+G    DG+ D             ++  AC  G +
Sbjct: 323 CVCLGDNSEDADEIIQCDNCGITVHEGCYGVDGESDSIMSSASENSTEPWFCDACKCGVS 382

Query: 148 SSC 150
            SC
Sbjct: 383 PSC 385


>gi|55769550 PHD finger protein 14 isoform 1 [Homo sapiens]
          Length = 948

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 15/63 (23%), Positives = 22/63 (34%), Gaps = 7/63 (11%)

Query: 95  CFLMACEKPGKKSIAACHNVGLLAHDGQVNEDGQPDL-------GKARDYYTRACDGGYT 147
           C  +         I  C N G+  H+G    DG+ D             ++  AC  G +
Sbjct: 323 CVCLGDNSEDADEIIQCDNCGITVHEGCYGVDGESDSIMSSASENSTEPWFCDACKCGVS 382

Query: 148 SSC 150
            SC
Sbjct: 383 PSC 385


>gi|110626177 zinc finger protein 699 [Homo sapiens]
          Length = 642

 Score = 27.7 bits (60), Expect = 8.7
 Identities = 27/109 (24%), Positives = 43/109 (39%), Gaps = 15/109 (13%)

Query: 5   VDFQDEEQVKSFLENMEVECNYHCYHEKDPDGCYRLVDYLEGIRKNFDEAAKVLKFNCEE 64
           +D+Q++   +  L N  VE  Y CY E      +  V  L+ +++N     +V    C E
Sbjct: 145 IDYQNKSHERH-LRNHMVENIYECYEENQDGQTFSQVPNLDSLKRN----TEVKSCECHE 199

Query: 65  -----NQHSDSCYKLGAHYVTGKGGLTQDLKAAARCF-LMACEKPGKKS 107
                  HS     L +H  +  G      K   + F  +AC K   K+
Sbjct: 200 CGKAFVDHS----SLKSHIRSHTGSKPYQCKECGKAFHFLACFKKHMKT 244


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.136    0.425 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,478,897
Number of Sequences: 37866
Number of extensions: 429846
Number of successful extensions: 860
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 843
Number of HSP's gapped (non-prelim): 24
length of query: 231
length of database: 18,247,518
effective HSP length: 99
effective length of query: 132
effective length of database: 14,498,784
effective search space: 1913839488
effective search space used: 1913839488
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.