Guide to the Human Genome
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Name: SLC10A7 Sequence: fasta or formatted (340aa) NCBI GI: 71725371
Description:

solute carrier family 10 (sodium/bile acid cotransporter family), member 7 isoform b

Referenced in:

Solute Carrier Families

Other entries for this name:
alt prot [159aa] solute carrier family 10 (sodium/bile acid cotransporter family),...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         19           3
 C cysteine            0.9          3           1
 D aspartate           1.8          6           1
 E glutamate           2.6          9           2
 F phenylalanine       7.9         27           2
 G glycine             5.9         20           2
 H histidine           1.8          6           1
 I isoleucine         10.9         37           2
 K lysine              4.7         16           2
 L leucine            15.0         51           5
 M methionine          2.6          9           1
 N asparagine          2.6          9           2
 P proline             5.9         20           3
 Q glutamine           2.4          8           1
 R arginine            2.6          9           2
 S serine              9.4         32           4
 T threonine           7.1         24           2
 V valine              7.6         26           3
 W tryptophan          1.5          5           1
 Y tyrosine            1.2          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 10 (sodium/bile acid cotranspo... 
SLC10A7               0.409   solute carrier family 10 (sodium/bile acid cotranspo...
OR4F6                 0.011   olfactory receptor, family 4, subfamily F, member 6 ...
LOC100288635          0.009   PREDICTED: hypothetical protein 
LOC100288635          0.009   PREDICTED: hypothetical protein XP_002343184 
SDSL                  0.009   serine dehydratase-like 
ADORA2B               0.008   adenosine A2b receptor 
SLC26A7               0.008   solute carrier family 26, member 7 isoform a 
SLC26A7               0.008   solute carrier family 26, member 7 isoform b 
FZD8                  0.008   frizzled 8 
SGPP1                 0.006   sphingosine-1-phosphate phosphatase 1 
OR8D1                 0.006   olfactory receptor, family 8, subfamily D, member 1 ...
IGF2                  0.006   insulin-like growth factor 2 isoform 1 precursor [Hom...
IGF2                  0.006   insulin-like growth factor 2 isoform 1 precursor [H...
IGF2                  0.006   insulin-like growth factor 2 isoform 2 
SLC14A1               0.005   solute carrier family 14 (urea transporter), member...
SLC14A1               0.005   solute carrier family 14 (urea transporter), member...
SLC14A1               0.005   solute carrier family 14 (urea transporter), member...
SLC14A1               0.005   solute carrier family 14 (urea transporter), member...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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