Search of human proteins with 4504573

Search of human proteins with 4504573

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4504573 inhibitor of DNA binding 4, dominant negative
helix-loop-helix protein [Homo sapiens]
         (161 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4504573 inhibitor of DNA binding 4, dominant negative helix-l...   333   4e-92
gi|31982933 inhibitor of DNA binding 2 [Homo sapiens]                  95   3e-20
gi|31317299 inhibitor of DNA binding 1 isoform a [Homo sapiens]        85   3e-17
gi|31317297 inhibitor of DNA binding 1 isoform b [Homo sapiens]        82   2e-16
gi|156119621 inhibitor of DNA binding 3 [Homo sapiens]                 82   2e-16
gi|161484632 nescient helix loop helix 2 [Homo sapiens]                47   5e-06
gi|5031945 nescient helix loop helix 2 [Homo sapiens]                  47   5e-06
gi|34147558 lymphoblastic leukemia derived sequence 1 [Homo sapi...    47   5e-06
gi|21553337 atonal homolog 7 [Homo sapiens]                            44   5e-05
gi|5031943 nescient helix loop helix 1 [Homo sapiens]                  43   1e-04
gi|239752994 PREDICTED: achaete-scute complex homolog 5 (Drosoph...    42   2e-04
gi|239747548 PREDICTED: achaete-scute complex homolog 5 (Drosoph...    42   2e-04
gi|239741422 PREDICTED: achaete-scute complex homolog 5 [Homo sa...    42   2e-04
gi|116805332 musculin [Homo sapiens]                                   42   2e-04
gi|4885665 achaete-scute complex homolog-like 2 [Homo sapiens]         42   2e-04
gi|68989258 neurogenin 3 [Homo sapiens]                                41   4e-04
gi|4885075 atonal homolog 1 [Homo sapiens]                             41   5e-04
gi|4507363 T-cell acute lymphocytic leukemia 1 [Homo sapiens]          41   5e-04
gi|30039710 pancreas specific transcription factor, 1a [Homo sap...    40   7e-04
gi|148922889 scleraxis homolog B [Homo sapiens]                        40   0.001
gi|186972126 scleraxis homolog A [Homo sapiens]                        40   0.001
gi|4885619 T-cell acute lymphocytic leukemia 2 [Homo sapiens]          40   0.001
gi|48255909 basic helix-loop-helix transcription factor 15 [Homo...    39   0.003
gi|55743094 achaete-scute complex homolog 1 [Homo sapiens]             38   0.003
gi|4507741 twist [Homo sapiens]                                        38   0.004
gi|134288906 tripartite motif-containing 67 [Homo sapiens]             38   0.004
gi|239749439 PREDICTED: similar to transcription factor 23 [Homo...    37   0.006
gi|239743573 PREDICTED: similar to transcription factor 23 [Homo...    37   0.006
gi|206597481 achaete-scute complex-like 4 [Homo sapiens]               37   0.007
gi|116517330 factor in the germline alpha [Homo sapiens]               37   0.007

>gi|4504573 inhibitor of DNA binding 4, dominant negative
           helix-loop-helix protein [Homo sapiens]
          Length = 161

 Score =  333 bits (854), Expect = 4e-92
 Identities = 161/161 (100%), Positives = 161/161 (100%)

Query: 1   MKAVSPVRPSGRKAPSGCGGGELALRCLAEHGHSLGGSAAAAAAAAAARCKAAEAAADEP 60
           MKAVSPVRPSGRKAPSGCGGGELALRCLAEHGHSLGGSAAAAAAAAAARCKAAEAAADEP
Sbjct: 1   MKAVSPVRPSGRKAPSGCGGGELALRCLAEHGHSLGGSAAAAAAAAAARCKAAEAAADEP 60

Query: 61  ALCLQCDMNDCYSRLRRLVPTIPPNKKVSKVEILQHVIDYILDLQLALETHPALLRQPPP 120
           ALCLQCDMNDCYSRLRRLVPTIPPNKKVSKVEILQHVIDYILDLQLALETHPALLRQPPP
Sbjct: 61  ALCLQCDMNDCYSRLRRLVPTIPPNKKVSKVEILQHVIDYILDLQLALETHPALLRQPPP 120

Query: 121 PAPPHHPAGTCPAAPPRTPLTALNTDPAGAVNKQGDSILCR 161
           PAPPHHPAGTCPAAPPRTPLTALNTDPAGAVNKQGDSILCR
Sbjct: 121 PAPPHHPAGTCPAAPPRTPLTALNTDPAGAVNKQGDSILCR 161


>gi|31982933 inhibitor of DNA binding 2 [Homo sapiens]
          Length = 134

 Score = 94.7 bits (234), Expect = 3e-20
 Identities = 64/146 (43%), Positives = 82/146 (56%), Gaps = 37/146 (25%)

Query: 1   MKAVSPVRPSGRKAPSGCGGGELALRCLAEHGHSLGGSAAAAAAAAAARCKAAEAAADEP 60
           MKA SPVR   + + S                HSLG S +             +   D+P
Sbjct: 1   MKAFSPVRSVRKNSLSD---------------HSLGISRS-------------KTPVDDP 32

Query: 61  ALCLQCDMNDCYSRLRRLVPTIPPNKKVSKVEILQHVIDYILDLQLALETHPALLRQPPP 120
            + L  +MNDCYS+L+ LVP+IP NKKVSK+EILQHVIDYILDLQ+AL++HP ++     
Sbjct: 33  -MSLLYNMNDCYSKLKELVPSIPQNKKVSKMEILQHVIDYILDLQIALDSHPTIV----- 86

Query: 121 PAPPHHPAGTCPAAPPRTPLTALNTD 146
            +  H   G   A+  RTPLT LNTD
Sbjct: 87  -SLHHQRPGQNQAS--RTPLTTLNTD 109


>gi|31317299 inhibitor of DNA binding 1 isoform a [Homo sapiens]
          Length = 155

 Score = 84.7 bits (208), Expect = 3e-17
 Identities = 60/148 (40%), Positives = 74/148 (50%), Gaps = 24/148 (16%)

Query: 19  GGGELALRCLAEHGHSLGGSAAAAAAAAAARCKAAEAAADEPALCLQCDMNDCYSRLRRL 78
           G GE+ +RCL+E       S A +  A  A  +      ++    L  DMN CYSRL+ L
Sbjct: 27  GAGEV-VRCLSEQ------SVAISRCAGGAGARLPALLDEQQVNVLLYDMNGCYSRLKEL 79

Query: 79  VPTIPPNKKVSKVEILQHVIDYILDLQLALETHPALLRQPPPPAPPHHPAGTCPAAPPRT 138
           VPT+P N+KVSKVEILQHVIDYI DLQL L +   +            P G     P R 
Sbjct: 80  VPTLPQNRKVSKVEILQHVIDYIRDLQLELNSESEV----------GTPGGR--GLPVRA 127

Query: 139 PLTALNTD-----PAGAVNKQGDSILCR 161
           PL+ LN +        A     D ILCR
Sbjct: 128 PLSTLNGEISALTAEAACVPADDRILCR 155


>gi|31317297 inhibitor of DNA binding 1 isoform b [Homo sapiens]
          Length = 149

 Score = 82.4 bits (202), Expect = 2e-16
 Identities = 54/126 (42%), Positives = 67/126 (53%), Gaps = 19/126 (15%)

Query: 19  GGGELALRCLAEHGHSLGGSAAAAAAAAAARCKAAEAAADEPALCLQCDMNDCYSRLRRL 78
           G GE+ +RCL+E       S A +  A  A  +      ++    L  DMN CYSRL+ L
Sbjct: 27  GAGEV-VRCLSEQ------SVAISRCAGGAGARLPALLDEQQVNVLLYDMNGCYSRLKEL 79

Query: 79  VPTIPPNKKVSKVEILQHVIDYILDLQLALETHPALLRQPPPPAPPHHPAGTCPAAPPRT 138
           VPT+P N+KVSKVEILQHVIDYI DLQL L +   +            P G     P R 
Sbjct: 80  VPTLPQNRKVSKVEILQHVIDYIRDLQLELNSESEV----------GTPGGR--GLPVRA 127

Query: 139 PLTALN 144
           PL+ LN
Sbjct: 128 PLSTLN 133


>gi|156119621 inhibitor of DNA binding 3 [Homo sapiens]
          Length = 119

 Score = 82.4 bits (202), Expect = 2e-16
 Identities = 61/135 (45%), Positives = 72/135 (53%), Gaps = 29/135 (21%)

Query: 1   MKAVSPVRPSGRKAPSGCGGGELALRCLAEHGHSLGGSAAAAAAAAAARCKAAEAAADEP 60
           MKA+SPVR        GC     A+ CL+E             + A AR +    AA+EP
Sbjct: 1   MKALSPVR--------GCYE---AVCCLSER------------SLAIARGRGKGPAAEEP 37

Query: 61  ALCLQCDMNDCYSRLRRLVPTIPPNKKVSKVEILQHVIDYILDLQLALETHPALLRQPPP 120
            L L  DMN CYSRLR LVP +P   ++S+VEILQ VIDYILDLQ+ L   PA    P P
Sbjct: 38  -LSLLDDMNHCYSRLRELVPGVPRGTQLSQVEILQRVIDYILDLQVVL-AEPA----PGP 91

Query: 121 PAPPHHPAGTCPAAP 135
           P  PH P  T    P
Sbjct: 92  PDGPHLPIQTAELTP 106


>gi|161484632 nescient helix loop helix 2 [Homo sapiens]
          Length = 135

 Score = 47.4 bits (111), Expect = 5e-06
 Identities = 34/107 (31%), Positives = 51/107 (47%), Gaps = 6/107 (5%)

Query: 3   AVSPVRPSGRKAPSGCGGGELALRCLAEHGHSLGGSAAAAAAAAAARCKAAEAAADEPAL 62
           +VS + P       G GG   AL     H   L          A A+ ++A A  +   +
Sbjct: 34  SVSDLEPVEEAEGDGKGGSRAALY---PHPQQLSREEKRRRRRATAKYRSAHATRERIRV 90

Query: 63  CLQCDMNDCYSRLRRLVPTIPPNKKVSKVEILQHVIDYILDLQLALE 109
                 N  ++ LR+L+PT+PP+KK+SK+EIL+  I YI  L   L+
Sbjct: 91  EA---FNLAFAELRKLLPTLPPDKKLSKIEILRLAICYISYLNHVLD 134


>gi|5031945 nescient helix loop helix 2 [Homo sapiens]
          Length = 135

 Score = 47.4 bits (111), Expect = 5e-06
 Identities = 34/107 (31%), Positives = 51/107 (47%), Gaps = 6/107 (5%)

Query: 3   AVSPVRPSGRKAPSGCGGGELALRCLAEHGHSLGGSAAAAAAAAAARCKAAEAAADEPAL 62
           +VS + P       G GG   AL     H   L          A A+ ++A A  +   +
Sbjct: 34  SVSDLEPVEEAEGDGKGGSRAALY---PHPQQLSREEKRRRRRATAKYRSAHATRERIRV 90

Query: 63  CLQCDMNDCYSRLRRLVPTIPPNKKVSKVEILQHVIDYILDLQLALE 109
                 N  ++ LR+L+PT+PP+KK+SK+EIL+  I YI  L   L+
Sbjct: 91  EA---FNLAFAELRKLLPTLPPDKKLSKIEILRLAICYISYLNHVLD 134


>gi|34147558 lymphoblastic leukemia derived sequence 1 [Homo
           sapiens]
          Length = 280

 Score = 47.4 bits (111), Expect = 5e-06
 Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 1/69 (1%)

Query: 65  QCDMNDCYSRLRRLVPTIPPNKKVSKVEILQHVIDYI-LDLQLALETHPALLRQPPPPAP 123
           Q ++N  ++ LR+L+PT PP++K+SK E+L+  + YI   ++L  +   AL   P PP P
Sbjct: 163 QQNVNGAFAELRKLLPTHPPDRKLSKNEVLRLAMKYIGFLVRLLRDQAAALAAGPTPPGP 222

Query: 124 PHHPAGTCP 132
              P    P
Sbjct: 223 RKRPVHRVP 231


>gi|21553337 atonal homolog 7 [Homo sapiens]
          Length = 152

 Score = 44.3 bits (103), Expect = 5e-05
 Identities = 36/106 (33%), Positives = 48/106 (45%), Gaps = 16/106 (15%)

Query: 1   MKAVSPVRP--SGRKAPSGCGGGELALRCLAEHGHSLGGSAAAAAAAAAARCKAAEAAAD 58
           MK+  P  P    R AP   GG E A  C           A A    +AAR + A  A +
Sbjct: 1   MKSCKPSGPPAGARVAPPCAGGTECAGTC-----------AGAGRLESAARRRLAANARE 49

Query: 59  EPALCLQCDMNDCYSRLRRLVPTIPPNKKVSKVEILQHVIDYILDL 104
              +     +N  + RLRR+VP    +KK+SK E LQ  + YI+ L
Sbjct: 50  RRRMQ---GLNTAFDRLRRVVPQWGQDKKLSKYETLQMALSYIMAL 92


>gi|5031943 nescient helix loop helix 1 [Homo sapiens]
          Length = 133

 Score = 43.1 bits (100), Expect = 1e-04
 Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 7/99 (7%)

Query: 15  PSGCGGGELALRCLAEHGHS----LGGSAAAAAAAAAARCKAAEAAADEPALCLQCDMND 70
           P G GGG+       E G      L          A A+ + A A  +   +      N 
Sbjct: 37  PGGPGGGQARGPEPGEPGRKDLQHLSREERRRRRRATAKYRTAHATRERIRVEA---FNL 93

Query: 71  CYSRLRRLVPTIPPNKKVSKVEILQHVIDYILDLQLALE 109
            ++ LR+L+PT+PP+KK+SK+EIL+  I YI  L   L+
Sbjct: 94  AFAELRKLLPTLPPDKKLSKIEILRLAICYISYLNHVLD 132


>gi|239752994 PREDICTED: achaete-scute complex homolog 5
           (Drosophila) [Homo sapiens]
          Length = 313

 Score = 42.4 bits (98), Expect = 2e-04
 Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 3/72 (4%)

Query: 68  MNDCYSRLRRLVPTIPPNKKVSKVEILQHVIDYILDLQLALETHPALLRQPPPPAPPHHP 127
           +N+ Y+RLR  +P     K++SKVE L+  I YI  LQ  L + P      PP +     
Sbjct: 206 VNEGYARLRGHLPGALAEKRLSKVETLRAAIRYIKYLQELLSSAPD--GSTPPASRGLPG 263

Query: 128 AGTCPAAPPRTP 139
            G CP APP TP
Sbjct: 264 TGPCP-APPATP 274


>gi|239747548 PREDICTED: achaete-scute complex homolog 5
           (Drosophila) [Homo sapiens]
          Length = 313

 Score = 42.4 bits (98), Expect = 2e-04
 Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 3/72 (4%)

Query: 68  MNDCYSRLRRLVPTIPPNKKVSKVEILQHVIDYILDLQLALETHPALLRQPPPPAPPHHP 127
           +N+ Y+RLR  +P     K++SKVE L+  I YI  LQ  L + P      PP +     
Sbjct: 206 VNEGYARLRGHLPGALAEKRLSKVETLRAAIRYIKYLQELLSSAPD--GSTPPASRGLPG 263

Query: 128 AGTCPAAPPRTP 139
            G CP APP TP
Sbjct: 264 TGPCP-APPATP 274


>gi|239741422 PREDICTED: achaete-scute complex homolog 5 [Homo
           sapiens]
          Length = 313

 Score = 42.4 bits (98), Expect = 2e-04
 Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 3/72 (4%)

Query: 68  MNDCYSRLRRLVPTIPPNKKVSKVEILQHVIDYILDLQLALETHPALLRQPPPPAPPHHP 127
           +N+ Y+RLR  +P     K++SKVE L+  I YI  LQ  L + P      PP +     
Sbjct: 206 VNEGYARLRGHLPGALAEKRLSKVETLRAAIRYIKYLQELLSSAPD--GSTPPASRGLPG 263

Query: 128 AGTCPAAPPRTP 139
            G CP APP TP
Sbjct: 264 TGPCP-APPATP 274


>gi|116805332 musculin [Homo sapiens]
          Length = 206

 Score = 42.4 bits (98), Expect = 2e-04
 Identities = 34/116 (29%), Positives = 51/116 (43%), Gaps = 15/116 (12%)

Query: 12  RKAPSGCGGGELALRCLAEHGHSLGGSAAAAAAAAAARCKAAEA-AADEPALCLQCDMND 70
           RK P   GGG       A      GG     A  +AA CK ++  AA+         ++ 
Sbjct: 72  RKRPRVAGGGG------AGGSAGGGGKKPLPAKGSAAECKQSQRNAANARERARMRVLSK 125

Query: 71  CYSRLRRLVPTIPPNKKVSKVEILQHVIDYILDLQLALE--------THPALLRQP 118
            +SRL+  +P +PP+ K+SK++ L+    YI  L+  L+         HP  L  P
Sbjct: 126 AFSRLKTSLPWVPPDTKLSKLDTLRLASSYIAHLRQLLQEDRYENGYVHPVNLTWP 181


>gi|4885665 achaete-scute complex homolog-like 2 [Homo sapiens]
          Length = 193

 Score = 42.0 bits (97), Expect = 2e-04
 Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 10/92 (10%)

Query: 72  YSRLRRLVPTIPPNKKVSKVEILQHVIDYILDLQLALETHPA--------LLRQPPPPAP 123
           +  LR+ VP    +KK+SKVE L+  ++YI  LQ  L  H A        L  Q   P+ 
Sbjct: 70  FQALRQHVPHGGASKKLSKVETLRSAVEYIRALQRLLAEHDAVRNALAGGLRPQAVRPSA 129

Query: 124 PHHPAGTCPAAPPRTPLTALNTDPAGAVNKQG 155
           P  P GT P A   +P  A ++   G  ++ G
Sbjct: 130 PRGPPGTTPVA--ASPSRASSSPGRGGSSEPG 159


>gi|68989258 neurogenin 3 [Homo sapiens]
          Length = 214

 Score = 41.2 bits (95), Expect = 4e-04
 Identities = 37/134 (27%), Positives = 57/134 (42%), Gaps = 8/134 (5%)

Query: 5   SPVRPSGRKAPS---GCGGGELALRCLAEHGHSLGGSAAAAAAAAAARCKAAEAAADEPA 61
           SP R  G  A +   GC G    LR  A  G   G S   +  A + + ++    A++  
Sbjct: 38  SPTRTRGNCAEAEEGGCRGAPRKLR--ARRG---GRSRPKSELALSKQRRSRRKKANDRE 92

Query: 62  LCLQCDMNDCYSRLRRLVPTIPPNKKVSKVEILQHVIDYILDLQLALETHPALLRQPPPP 121
                ++N     LR ++PT P + K++K+E L+   +YI  L   L      L    PP
Sbjct: 93  RNRMHNLNSALDALRGVLPTFPDDAKLTKIETLRFAHNYIWALTQTLRIADHSLYALEPP 152

Query: 122 APPHHPAGTCPAAP 135
           AP     G+   +P
Sbjct: 153 APHCGELGSPGGSP 166


>gi|4885075 atonal homolog 1 [Homo sapiens]
          Length = 354

 Score = 40.8 bits (94), Expect = 5e-04
 Identities = 31/93 (33%), Positives = 42/93 (45%), Gaps = 7/93 (7%)

Query: 68  MNDCYSRLRRLVPTIPPNKKVSKVEILQHVIDYILDLQLALETHPALLRQPPPPA---PP 124
           +N  + +LR ++P+   +KK+SK E LQ    YI  L   L+T     + PPPPA     
Sbjct: 175 LNHAFDQLRNVIPSFNNDKKLSKYETLQMAQIYINALSELLQTPSGGEQPPPPPASCKSD 234

Query: 125 HHPAGTCPAAPPRTPLTALNTDPAGAVNKQGDS 157
           HH   T  +        A N   AGA    G S
Sbjct: 235 HHHLRTAASYEG----GAGNATAAGAQQASGGS 263


>gi|4507363 T-cell acute lymphocytic leukemia 1 [Homo sapiens]
          Length = 331

 Score = 40.8 bits (94), Expect = 5e-04
 Identities = 18/37 (48%), Positives = 28/37 (75%)

Query: 65  QCDMNDCYSRLRRLVPTIPPNKKVSKVEILQHVIDYI 101
           Q ++N  ++ LR+L+PT PP+KK+SK EIL+  + YI
Sbjct: 200 QQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYI 236


>gi|30039710 pancreas specific transcription factor, 1a [Homo
           sapiens]
          Length = 328

 Score = 40.4 bits (93), Expect = 7e-04
 Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 8/101 (7%)

Query: 9   PSGRKAPSGCGGGELALRCLAEHGHSLGGSAAAAAAAAAARCKA-AEA-------AADEP 60
           P    +P  C     A   +   G  L G + AAAAAA  R +  +EA       AA+  
Sbjct: 112 PYSPGSPPSCLAYPCAGAAVLSPGARLRGLSGAAAAAARRRRRVRSEAELQQLRQAANVR 171

Query: 61  ALCLQCDMNDCYSRLRRLVPTIPPNKKVSKVEILQHVIDYI 101
                  +ND +  LR  +PT+P  K++SKV+ L+  I YI
Sbjct: 172 ERRRMQSINDAFEGLRSHIPTLPYEKRLSKVDTLRLAIGYI 212


>gi|148922889 scleraxis homolog B [Homo sapiens]
          Length = 201

 Score = 39.7 bits (91), Expect = 0.001
 Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 17/74 (22%)

Query: 68  MNDCYSRLRRLVPTIPPNKKVSKVEILQHVIDYILDLQLALET----------------- 110
           +N  ++ LR L+PT P ++K+SK+E L+    YI  L   L                   
Sbjct: 91  VNTAFTALRTLIPTEPADRKLSKIETLRLASSYISHLGNVLLAGEACGDGQPCHSGPAFF 150

Query: 111 HPALLRQPPPPAPP 124
           H A    PPPP PP
Sbjct: 151 HAARAGSPPPPPPP 164


>gi|186972126 scleraxis homolog A [Homo sapiens]
          Length = 201

 Score = 39.7 bits (91), Expect = 0.001
 Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 17/74 (22%)

Query: 68  MNDCYSRLRRLVPTIPPNKKVSKVEILQHVIDYILDLQLALET----------------- 110
           +N  ++ LR L+PT P ++K+SK+E L+    YI  L   L                   
Sbjct: 91  VNTAFTALRTLIPTEPADRKLSKIETLRLASSYISHLGNVLLAGEACGDGQPCHSGPAFF 150

Query: 111 HPALLRQPPPPAPP 124
           H A    PPPP PP
Sbjct: 151 HAARAGSPPPPPPP 164


>gi|4885619 T-cell acute lymphocytic leukemia 2 [Homo sapiens]
          Length = 108

 Score = 39.7 bits (91), Expect = 0.001
 Identities = 17/37 (45%), Positives = 28/37 (75%)

Query: 65  QCDMNDCYSRLRRLVPTIPPNKKVSKVEILQHVIDYI 101
           Q ++N  +++LR+L+PT PP+KK+SK E L+  + YI
Sbjct: 15  QQNVNSAFAKLRKLIPTHPPDKKLSKNETLRLAMRYI 51


>gi|48255909 basic helix-loop-helix transcription factor 15 [Homo
           sapiens]
          Length = 199

 Score = 38.5 bits (88), Expect = 0.003
 Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 3/87 (3%)

Query: 18  CGGGELALRCLAEHGHSLGGSAAAAAAAAAARCKAAEAAADEPALCLQCDMNDCYSRLRR 77
           C G E A R     G    G    A      R + A  A +         +N  ++ LR 
Sbjct: 41  CEGPEAARRGPGPGGGRRAGGGGGAGPVVVVRQRQAANARERDRTQ---SVNTAFTALRT 97

Query: 78  LVPTIPPNKKVSKVEILQHVIDYILDL 104
           L+PT P ++K+SK+E L+    YI  L
Sbjct: 98  LIPTEPVDRKLSKIETLRLASSYIAHL 124


>gi|55743094 achaete-scute complex homolog 1 [Homo sapiens]
          Length = 236

 Score = 38.1 bits (87), Expect = 0.003
 Identities = 19/43 (44%), Positives = 27/43 (62%)

Query: 72  YSRLRRLVPTIPPNKKVSKVEILQHVIDYILDLQLALETHPAL 114
           ++ LR  VP    NKK+SKVE L+  ++YI  LQ  L+ H A+
Sbjct: 138 FATLREHVPNGAANKKMSKVETLRSAVEYIRALQQLLDEHDAV 180


>gi|4507741 twist [Homo sapiens]
          Length = 202

 Score = 37.7 bits (86), Expect = 0.004
 Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 8/106 (7%)

Query: 5   SPVRPSGRKAPSGCGGGELALRCLAEHGHSLGGSAAAAAAAAAARCKAAEAAADEPALCL 64
           SP +    K  +GCGGG  A       G   G S+   +  +    +     A+      
Sbjct: 68  SPAQGKRGKKSAGCGGGGGA-------GGGGGSSSGGGSPQSYEELQTQRVMANVRERQR 120

Query: 65  QCDMNDCYSRLRRLVPTIPPNKKVSKVEILQHVIDYILDLQLALET 110
              +N+ ++ LR+++PT+ P+ K+SK++ L+    YI  L   L++
Sbjct: 121 TQSLNEAFAALRKIIPTL-PSDKLSKIQTLKLAARYIDFLYQVLQS 165


>gi|134288906 tripartite motif-containing 67 [Homo sapiens]
          Length = 783

 Score = 37.7 bits (86), Expect = 0.004
 Identities = 31/106 (29%), Positives = 40/106 (37%), Gaps = 30/106 (28%)

Query: 36  GGSAAAAAAAAAARCKAAEAAADEPA--LCLQCDMNDCYSRLRRLVPTIPPNKKVSKVEI 93
           G     +AAAA A C+  +    EPA  LC QCD+  C +   +  P+  P  K      
Sbjct: 194 GAVPGTSAAAAVAICQLCDRTPPEPAATLCEQCDVLYCSACQLKCHPSRGPFAK------ 247

Query: 94  LQHVIDYILDLQLALETHPALLRQPPPPAPPHH----PAGTCPAAP 135
                               L++ PPPP PP      P GT   AP
Sbjct: 248 ------------------HRLVQPPPPPPPPAEAASGPTGTAQGAP 275


>gi|239749439 PREDICTED: similar to transcription factor 23 [Homo
           sapiens]
          Length = 167

 Score = 37.4 bits (85), Expect = 0.006
 Identities = 30/107 (28%), Positives = 45/107 (42%), Gaps = 23/107 (21%)

Query: 3   AVSPVRPSGRKAPSGCGGGELALRCLAEHGHSLGGSAAAAAAAAAARCKAAEAAADEPAL 62
           A+   RP GR  P   G G          G S  GS   AAA AA      +        
Sbjct: 23  AIRDSRP-GRTGPGPAGPG----------GGSRSGSGRPAAANAARERSRVQT------- 64

Query: 63  CLQCDMNDCYSRLRRLVPTIPPNKKVSKVEILQHVIDYILDLQLALE 109
                +   +  L+R +P++PP+ K+SK+++L     YI  L  +L+
Sbjct: 65  -----LRHAFLELQRTLPSVPPDTKLSKLDVLLLATTYIAHLTRSLQ 106


>gi|239743573 PREDICTED: similar to transcription factor 23 [Homo
           sapiens]
          Length = 167

 Score = 37.4 bits (85), Expect = 0.006
 Identities = 30/107 (28%), Positives = 45/107 (42%), Gaps = 23/107 (21%)

Query: 3   AVSPVRPSGRKAPSGCGGGELALRCLAEHGHSLGGSAAAAAAAAAARCKAAEAAADEPAL 62
           A+   RP GR  P   G G          G S  GS   AAA AA      +        
Sbjct: 23  AIRDSRP-GRTGPGPAGPG----------GGSRSGSGRPAAANAARERSRVQT------- 64

Query: 63  CLQCDMNDCYSRLRRLVPTIPPNKKVSKVEILQHVIDYILDLQLALE 109
                +   +  L+R +P++PP+ K+SK+++L     YI  L  +L+
Sbjct: 65  -----LRHAFLELQRTLPSVPPDTKLSKLDVLLLATTYIAHLTRSLQ 106


>gi|206597481 achaete-scute complex-like 4 [Homo sapiens]
          Length = 173

 Score = 37.0 bits (84), Expect = 0.007
 Identities = 20/42 (47%), Positives = 28/42 (66%)

Query: 68  MNDCYSRLRRLVPTIPPNKKVSKVEILQHVIDYILDLQLALE 109
           +N+ Y+RLR  +P    +K++SKVE L+  IDYI  LQ  LE
Sbjct: 89  VNEGYARLRDHLPRELADKRLSKVETLRAAIDYIKHLQELLE 130


>gi|116517330 factor in the germline alpha [Homo sapiens]
          Length = 219

 Score = 37.0 bits (84), Expect = 0.007
 Identities = 20/53 (37%), Positives = 32/53 (60%)

Query: 67  DMNDCYSRLRRLVPTIPPNKKVSKVEILQHVIDYILDLQLALETHPALLRQPP 119
           ++N  ++RL+ LVP +P ++K SKV+IL+   +YI  L   LE      +Q P
Sbjct: 80  NLNRGFARLKALVPFLPQSRKPSKVDILKGATEYIQVLSDLLEGAKDSKKQDP 132


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.133    0.415 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,335,649
Number of Sequences: 37866
Number of extensions: 456259
Number of successful extensions: 10517
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 403
Number of HSP's successfully gapped in prelim test: 270
Number of HSP's that attempted gapping in prelim test: 6806
Number of HSP's gapped (non-prelim): 3009
length of query: 161
length of database: 18,247,518
effective HSP length: 94
effective length of query: 67
effective length of database: 14,688,114
effective search space: 984103638
effective search space used: 984103638
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.