Search of human proteins with 4504299

Search of human proteins with 4504299

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4504299 histone cluster 3, H3 [Homo sapiens]
         (136 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4504299 histone cluster 3, H3 [Homo sapiens]                       266   3e-72
gi|4504287 histone cluster 1, H3e [Homo sapiens]                      261   2e-70
gi|4504295 histone cluster 1, H3h [Homo sapiens]                      261   2e-70
gi|4504289 histone cluster 1, H3i [Homo sapiens]                      261   2e-70
gi|4504281 histone cluster 1, H3a [Homo sapiens]                      261   2e-70
gi|10440560 histone cluster 1, H3f [Homo sapiens]                     261   2e-70
gi|21071021 histone cluster 1, H3d [Homo sapiens]                     261   2e-70
gi|4504297 histone cluster 1, H3b [Homo sapiens]                      261   2e-70
gi|4504293 histone cluster 1, H3j [Homo sapiens]                      261   2e-70
gi|4504285 histone cluster 1, H3c [Homo sapiens]                      261   2e-70
gi|4504291 H3 histone family, member H [Homo sapiens]                 261   2e-70
gi|53793688 histone cluster 2, H3a [Homo sapiens]                     257   2e-69
gi|31742503 histone cluster 2, H3c [Homo sapiens]                     257   2e-69
gi|183076548 histone cluster 2, H3d [Homo sapiens]                    257   2e-69
gi|4885385 H3 histone, family 3B [Homo sapiens]                       251   1e-67
gi|4504279 H3 histone, family 3A [Homo sapiens]                       251   1e-67
gi|188528667 histone H3-like [Homo sapiens]                           236   6e-63
gi|239742494 PREDICTED: similar to hCG1642908 [Homo sapiens]          209   4e-55
gi|169167761 PREDICTED: similar to HIStone family member (his-72...   206   5e-54
gi|88987392 PREDICTED: similar to HIStone family member (his-72)...   206   5e-54
gi|41147170 PREDICTED: similar to HIStone family member (his-72)...   206   5e-54
gi|239742093 PREDICTED: similar to histone H3.3B [Homo sapiens]       200   3e-52
gi|169167750 PREDICTED: similar to hCG1642908 [Homo sapiens]          153   5e-38
gi|169168508 PREDICTED: similar to hCG1642908 [Homo sapiens]          153   5e-38
gi|4502775 centromere protein A isoform a [Homo sapiens]              107   2e-24
gi|109637779 centromere protein A isoform b [Homo sapiens]             79   1e-15
gi|126722969 centromere protein T [Homo sapiens]                       32   0.21 
gi|169216381 PREDICTED: H2B histone family, member M [Homo sapiens]    31   0.27 
gi|169216635 PREDICTED: H2B histone family, member M [Homo sapiens]    31   0.27 
gi|4507963 zinc finger protein 37 homolog [Homo sapiens]               31   0.27 

>gi|4504299 histone cluster 3, H3 [Homo sapiens]
          Length = 136

 Score =  266 bits (681), Expect = 3e-72
 Identities = 136/136 (100%), Positives = 136/136 (100%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKVARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKVARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKVARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 61  LLIRKLPFQRLMREIAQDFKTDLRFQSSAVMALQEACESYLVGLFEDTNLCVIHAKRVTI 120
           LLIRKLPFQRLMREIAQDFKTDLRFQSSAVMALQEACESYLVGLFEDTNLCVIHAKRVTI
Sbjct: 61  LLIRKLPFQRLMREIAQDFKTDLRFQSSAVMALQEACESYLVGLFEDTNLCVIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 136
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136


>gi|4504287 histone cluster 1, H3e [Homo sapiens]
          Length = 136

 Score =  261 bits (666), Expect = 2e-70
 Identities = 132/136 (97%), Positives = 134/136 (98%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKVARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATK ARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 61  LLIRKLPFQRLMREIAQDFKTDLRFQSSAVMALQEACESYLVGLFEDTNLCVIHAKRVTI 120
           LLIRKLPFQRL+REIAQDFKTDLRFQSSAVMALQEACE+YLVGLFEDTNLC IHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 136
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136


>gi|4504295 histone cluster 1, H3h [Homo sapiens]
          Length = 136

 Score =  261 bits (666), Expect = 2e-70
 Identities = 132/136 (97%), Positives = 134/136 (98%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKVARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATK ARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 61  LLIRKLPFQRLMREIAQDFKTDLRFQSSAVMALQEACESYLVGLFEDTNLCVIHAKRVTI 120
           LLIRKLPFQRL+REIAQDFKTDLRFQSSAVMALQEACE+YLVGLFEDTNLC IHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 136
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136


>gi|4504289 histone cluster 1, H3i [Homo sapiens]
          Length = 136

 Score =  261 bits (666), Expect = 2e-70
 Identities = 132/136 (97%), Positives = 134/136 (98%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKVARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATK ARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 61  LLIRKLPFQRLMREIAQDFKTDLRFQSSAVMALQEACESYLVGLFEDTNLCVIHAKRVTI 120
           LLIRKLPFQRL+REIAQDFKTDLRFQSSAVMALQEACE+YLVGLFEDTNLC IHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 136
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136


>gi|4504281 histone cluster 1, H3a [Homo sapiens]
          Length = 136

 Score =  261 bits (666), Expect = 2e-70
 Identities = 132/136 (97%), Positives = 134/136 (98%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKVARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATK ARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 61  LLIRKLPFQRLMREIAQDFKTDLRFQSSAVMALQEACESYLVGLFEDTNLCVIHAKRVTI 120
           LLIRKLPFQRL+REIAQDFKTDLRFQSSAVMALQEACE+YLVGLFEDTNLC IHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 136
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136


>gi|10440560 histone cluster 1, H3f [Homo sapiens]
          Length = 136

 Score =  261 bits (666), Expect = 2e-70
 Identities = 132/136 (97%), Positives = 134/136 (98%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKVARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATK ARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 61  LLIRKLPFQRLMREIAQDFKTDLRFQSSAVMALQEACESYLVGLFEDTNLCVIHAKRVTI 120
           LLIRKLPFQRL+REIAQDFKTDLRFQSSAVMALQEACE+YLVGLFEDTNLC IHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 136
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136


>gi|21071021 histone cluster 1, H3d [Homo sapiens]
          Length = 136

 Score =  261 bits (666), Expect = 2e-70
 Identities = 132/136 (97%), Positives = 134/136 (98%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKVARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATK ARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 61  LLIRKLPFQRLMREIAQDFKTDLRFQSSAVMALQEACESYLVGLFEDTNLCVIHAKRVTI 120
           LLIRKLPFQRL+REIAQDFKTDLRFQSSAVMALQEACE+YLVGLFEDTNLC IHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 136
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136


>gi|4504297 histone cluster 1, H3b [Homo sapiens]
          Length = 136

 Score =  261 bits (666), Expect = 2e-70
 Identities = 132/136 (97%), Positives = 134/136 (98%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKVARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATK ARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 61  LLIRKLPFQRLMREIAQDFKTDLRFQSSAVMALQEACESYLVGLFEDTNLCVIHAKRVTI 120
           LLIRKLPFQRL+REIAQDFKTDLRFQSSAVMALQEACE+YLVGLFEDTNLC IHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 136
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136


>gi|4504293 histone cluster 1, H3j [Homo sapiens]
          Length = 136

 Score =  261 bits (666), Expect = 2e-70
 Identities = 132/136 (97%), Positives = 134/136 (98%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKVARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATK ARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 61  LLIRKLPFQRLMREIAQDFKTDLRFQSSAVMALQEACESYLVGLFEDTNLCVIHAKRVTI 120
           LLIRKLPFQRL+REIAQDFKTDLRFQSSAVMALQEACE+YLVGLFEDTNLC IHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 136
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136


>gi|4504285 histone cluster 1, H3c [Homo sapiens]
          Length = 136

 Score =  261 bits (666), Expect = 2e-70
 Identities = 132/136 (97%), Positives = 134/136 (98%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKVARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATK ARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 61  LLIRKLPFQRLMREIAQDFKTDLRFQSSAVMALQEACESYLVGLFEDTNLCVIHAKRVTI 120
           LLIRKLPFQRL+REIAQDFKTDLRFQSSAVMALQEACE+YLVGLFEDTNLC IHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 136
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136


>gi|4504291 H3 histone family, member H [Homo sapiens]
          Length = 136

 Score =  261 bits (666), Expect = 2e-70
 Identities = 132/136 (97%), Positives = 134/136 (98%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKVARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATK ARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 61  LLIRKLPFQRLMREIAQDFKTDLRFQSSAVMALQEACESYLVGLFEDTNLCVIHAKRVTI 120
           LLIRKLPFQRL+REIAQDFKTDLRFQSSAVMALQEACE+YLVGLFEDTNLC IHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 136
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136


>gi|53793688 histone cluster 2, H3a [Homo sapiens]
          Length = 136

 Score =  257 bits (656), Expect = 2e-69
 Identities = 131/136 (96%), Positives = 133/136 (97%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKVARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATK ARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 61  LLIRKLPFQRLMREIAQDFKTDLRFQSSAVMALQEACESYLVGLFEDTNLCVIHAKRVTI 120
           LLIRKLPFQRL+REIAQDFKTDLRFQSSAVMALQEA E+YLVGLFEDTNLC IHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 136
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136


>gi|31742503 histone cluster 2, H3c [Homo sapiens]
          Length = 136

 Score =  257 bits (656), Expect = 2e-69
 Identities = 131/136 (96%), Positives = 133/136 (97%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKVARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATK ARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 61  LLIRKLPFQRLMREIAQDFKTDLRFQSSAVMALQEACESYLVGLFEDTNLCVIHAKRVTI 120
           LLIRKLPFQRL+REIAQDFKTDLRFQSSAVMALQEA E+YLVGLFEDTNLC IHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 136
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136


>gi|183076548 histone cluster 2, H3d [Homo sapiens]
          Length = 136

 Score =  257 bits (656), Expect = 2e-69
 Identities = 131/136 (96%), Positives = 133/136 (97%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKVARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATK ARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 61  LLIRKLPFQRLMREIAQDFKTDLRFQSSAVMALQEACESYLVGLFEDTNLCVIHAKRVTI 120
           LLIRKLPFQRL+REIAQDFKTDLRFQSSAVMALQEA E+YLVGLFEDTNLC IHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 136
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136


>gi|4885385 H3 histone, family 3B [Homo sapiens]
          Length = 136

 Score =  251 bits (641), Expect = 1e-67
 Identities = 127/136 (93%), Positives = 132/136 (97%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKVARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATK ARKSAP+TGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 61  LLIRKLPFQRLMREIAQDFKTDLRFQSSAVMALQEACESYLVGLFEDTNLCVIHAKRVTI 120
           LLIRKLPFQRL+REIAQDFKTDLRFQS+A+ ALQEA E+YLVGLFEDTNLC IHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 136
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136


>gi|4504279 H3 histone, family 3A [Homo sapiens]
          Length = 136

 Score =  251 bits (641), Expect = 1e-67
 Identities = 127/136 (93%), Positives = 132/136 (97%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKVARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATK ARKSAP+TGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 61  LLIRKLPFQRLMREIAQDFKTDLRFQSSAVMALQEACESYLVGLFEDTNLCVIHAKRVTI 120
           LLIRKLPFQRL+REIAQDFKTDLRFQS+A+ ALQEA E+YLVGLFEDTNLC IHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 136
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136


>gi|188528667 histone H3-like [Homo sapiens]
          Length = 135

 Score =  236 bits (601), Expect = 6e-63
 Identities = 123/136 (90%), Positives = 127/136 (93%), Gaps = 1/136 (0%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKVARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATK ARKS P+T GVK PHRYRPGTVALREIRRYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSTPSTCGVK-PHRYRPGTVALREIRRYQKSTE 59

Query: 61  LLIRKLPFQRLMREIAQDFKTDLRFQSSAVMALQEACESYLVGLFEDTNLCVIHAKRVTI 120
           LLIRKLPFQRL+REIAQDF TDLRFQS+AV ALQEA E+YLVGL EDTNLC IHAKRVTI
Sbjct: 60  LLIRKLPFQRLVREIAQDFNTDLRFQSAAVGALQEASEAYLVGLLEDTNLCAIHAKRVTI 119

Query: 121 MPKDIQLARRIRGERA 136
           MPKDIQLARRIRGERA
Sbjct: 120 MPKDIQLARRIRGERA 135


>gi|239742494 PREDICTED: similar to hCG1642908 [Homo sapiens]
          Length = 147

 Score =  209 bits (533), Expect = 4e-55
 Identities = 104/136 (76%), Positives = 120/136 (88%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKVARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARK+T  +APRK LATK ARK A  TGG+KKPHRY+PGT+ALREIR+YQKST+
Sbjct: 1   MARTKQTARKATAWQAPRKPLATKAARKRASPTGGIKKPHRYKPGTLALREIRKYQKSTQ 60

Query: 61  LLIRKLPFQRLMREIAQDFKTDLRFQSSAVMALQEACESYLVGLFEDTNLCVIHAKRVTI 120
           LL+RKLPFQRL+REIAQ    DLRFQS+A+ ALQEA E+YLV LFEDTNLC IHA+RVTI
Sbjct: 61  LLLRKLPFQRLVREIAQAISPDLRFQSAAIGALQEASEAYLVQLFEDTNLCAIHARRVTI 120

Query: 121 MPKDIQLARRIRGERA 136
           MP+D+QLARR+RGE A
Sbjct: 121 MPRDMQLARRLRGEGA 136


>gi|169167761 PREDICTED: similar to HIStone family member (his-72)
           [Homo sapiens]
          Length = 136

 Score =  206 bits (524), Expect = 5e-54
 Identities = 102/134 (76%), Positives = 118/134 (88%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKVARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARK+T  +APRK LATK A K AP TGG+KKPHRY+PGT+ALREIR+YQKST+
Sbjct: 1   MARTKQTARKATAWQAPRKPLATKAAGKRAPPTGGIKKPHRYKPGTLALREIRKYQKSTQ 60

Query: 61  LLIRKLPFQRLMREIAQDFKTDLRFQSSAVMALQEACESYLVGLFEDTNLCVIHAKRVTI 120
           LL+RKLPFQRL+REIAQ    DLRFQS+A+ ALQEA E+YLV LFEDTNLC IHA+RVTI
Sbjct: 61  LLLRKLPFQRLVREIAQAISPDLRFQSAAIGALQEASEAYLVQLFEDTNLCAIHARRVTI 120

Query: 121 MPKDIQLARRIRGE 134
           MP+D+QLARR+R E
Sbjct: 121 MPRDMQLARRLRRE 134


>gi|88987392 PREDICTED: similar to HIStone family member (his-72)
           [Homo sapiens]
          Length = 136

 Score =  206 bits (524), Expect = 5e-54
 Identities = 102/134 (76%), Positives = 118/134 (88%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKVARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARK+T  +APRK LATK A K AP TGG+KKPHRY+PGT+ALREIR+YQKST+
Sbjct: 1   MARTKQTARKATAWQAPRKPLATKAAGKRAPPTGGIKKPHRYKPGTLALREIRKYQKSTQ 60

Query: 61  LLIRKLPFQRLMREIAQDFKTDLRFQSSAVMALQEACESYLVGLFEDTNLCVIHAKRVTI 120
           LL+RKLPFQRL+REIAQ    DLRFQS+A+ ALQEA E+YLV LFEDTNLC IHA+RVTI
Sbjct: 61  LLLRKLPFQRLVREIAQAISPDLRFQSAAIGALQEASEAYLVQLFEDTNLCAIHARRVTI 120

Query: 121 MPKDIQLARRIRGE 134
           MP+D+QLARR+R E
Sbjct: 121 MPRDMQLARRLRRE 134


>gi|41147170 PREDICTED: similar to HIStone family member (his-72)
           [Homo sapiens]
          Length = 136

 Score =  206 bits (524), Expect = 5e-54
 Identities = 102/134 (76%), Positives = 118/134 (88%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKVARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARK+T  +APRK LATK A K AP TGG+KKPHRY+PGT+ALREIR+YQKST+
Sbjct: 1   MARTKQTARKATAWQAPRKPLATKAAGKRAPPTGGIKKPHRYKPGTLALREIRKYQKSTQ 60

Query: 61  LLIRKLPFQRLMREIAQDFKTDLRFQSSAVMALQEACESYLVGLFEDTNLCVIHAKRVTI 120
           LL+RKLPFQRL+REIAQ    DLRFQS+A+ ALQEA E+YLV LFEDTNLC IHA+RVTI
Sbjct: 61  LLLRKLPFQRLVREIAQAISPDLRFQSAAIGALQEASEAYLVQLFEDTNLCAIHARRVTI 120

Query: 121 MPKDIQLARRIRGE 134
           MP+D+QLARR+R E
Sbjct: 121 MPRDMQLARRLRRE 134


>gi|239742093 PREDICTED: similar to histone H3.3B [Homo sapiens]
          Length = 141

 Score =  200 bits (509), Expect = 3e-52
 Identities = 100/122 (81%), Positives = 112/122 (91%)

Query: 15  KAPRKQLATKVARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLMRE 74
           KA RKQL TK A KSAP+TGGVKKPH YRPGTVALREIRRYQK+TELLIRKL FQRL++E
Sbjct: 20  KAARKQLGTKAAHKSAPSTGGVKKPHHYRPGTVALREIRRYQKATELLIRKLRFQRLVQE 79

Query: 75  IAQDFKTDLRFQSSAVMALQEACESYLVGLFEDTNLCVIHAKRVTIMPKDIQLARRIRGE 134
           IAQD KTDLRFQS+A+ ALQEA E+YLVGLFED+NLC IHAKR+TIMPK+IQLARRI+G+
Sbjct: 80  IAQDLKTDLRFQSAAIGALQEASEAYLVGLFEDSNLCAIHAKRLTIMPKEIQLARRIQGK 139

Query: 135 RA 136
           RA
Sbjct: 140 RA 141


>gi|169167750 PREDICTED: similar to hCG1642908 [Homo sapiens]
          Length = 193

 Score =  153 bits (386), Expect = 5e-38
 Identities = 76/101 (75%), Positives = 88/101 (87%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKVARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARK+T  +APRK LATK ARK A  TGG+KKPHRY+PGT+ALREIR+YQKST+
Sbjct: 46  MARTKQTARKATAWQAPRKPLATKAARKRASPTGGIKKPHRYKPGTLALREIRKYQKSTQ 105

Query: 61  LLIRKLPFQRLMREIAQDFKTDLRFQSSAVMALQEACESYL 101
           LL+RKLPFQRL+REIAQ    DLRFQS+A+ ALQEA E+YL
Sbjct: 106 LLLRKLPFQRLVREIAQAISPDLRFQSAAIGALQEASEAYL 146


>gi|169168508 PREDICTED: similar to hCG1642908 [Homo sapiens]
          Length = 193

 Score =  153 bits (386), Expect = 5e-38
 Identities = 76/101 (75%), Positives = 88/101 (87%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKVARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARK+T  +APRK LATK ARK A  TGG+KKPHRY+PGT+ALREIR+YQKST+
Sbjct: 46  MARTKQTARKATAWQAPRKPLATKAARKRASPTGGIKKPHRYKPGTLALREIRKYQKSTQ 105

Query: 61  LLIRKLPFQRLMREIAQDFKTDLRFQSSAVMALQEACESYL 101
           LL+RKLPFQRL+REIAQ    DLRFQS+A+ ALQEA E+YL
Sbjct: 106 LLLRKLPFQRLVREIAQAISPDLRFQSAAIGALQEASEAYL 146


>gi|4502775 centromere protein A isoform a [Homo sapiens]
          Length = 140

 Score =  107 bits (268), Expect = 2e-24
 Identities = 66/132 (50%), Positives = 83/132 (62%), Gaps = 9/132 (6%)

Query: 9   RKSTGGKAPRKQ----LATKVARKSAPATGGVKKPH-RYRPGTVALREIRRYQKSTELLI 63
           R+S   +APR++      T    +  P+ G     H R R G   L+EIR+ QKST LLI
Sbjct: 5   RRSRKPEAPRRRSPSPTPTPGPSRRGPSLGASSHQHSRRRQGW--LKEIRKLQKSTHLLI 62

Query: 64  RKLPFQRLMREIAQDFK--TDLRFQSSAVMALQEACESYLVGLFEDTNLCVIHAKRVTIM 121
           RKLPF RL REI   F    D  +Q+ A++ALQEA E++LV LFED  L  +HA RVT+ 
Sbjct: 63  RKLPFSRLAREICVKFTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGRVTLF 122

Query: 122 PKDIQLARRIRG 133
           PKD+QLARRIRG
Sbjct: 123 PKDVQLARRIRG 134


>gi|109637779 centromere protein A isoform b [Homo sapiens]
          Length = 114

 Score = 79.0 bits (193), Expect = 1e-15
 Identities = 55/130 (42%), Positives = 68/130 (52%), Gaps = 31/130 (23%)

Query: 9   RKSTGGKAPRKQ----LATKVARKSAPATGGVKKPH-RYRPGTVALREIRRYQKSTELLI 63
           R+S   +APR++      T    +  P+ G     H R R G   L+EIR+ QKST LLI
Sbjct: 5   RRSRKPEAPRRRSPSPTPTPGPSRRGPSLGASSHQHSRRRQGW--LKEIRKLQKSTHLLI 62

Query: 64  RKLPFQRLMREIAQDFKTDLRFQSSAVMALQEACESYLVGLFEDTNLCVIHAKRVTIMPK 123
           RKLPF RL                        A E++LV LFED  L  +HA RVT+ PK
Sbjct: 63  RKLPFSRL------------------------AAEAFLVHLFEDAYLLTLHAGRVTLFPK 98

Query: 124 DIQLARRIRG 133
           D+QLARRIRG
Sbjct: 99  DVQLARRIRG 108


>gi|126722969 centromere protein T [Homo sapiens]
          Length = 561

 Score = 31.6 bits (70), Expect = 0.21
 Identities = 14/55 (25%), Positives = 28/55 (50%)

Query: 79  FKTDLRFQSSAVMALQEACESYLVGLFEDTNLCVIHAKRVTIMPKDIQLARRIRG 133
           F   +  +  A+  +++  + Y   L +D  +   HA R T+ P+D++L  R +G
Sbjct: 469 FYAKMPMERKALEMVEKCLDKYFQHLCDDLEVFAAHAGRKTVKPEDLELLMRRQG 523


>gi|169216381 PREDICTED: H2B histone family, member M [Homo sapiens]
          Length = 257

 Score = 31.2 bits (69), Expect = 0.27
 Identities = 27/130 (20%), Positives = 51/130 (39%), Gaps = 16/130 (12%)

Query: 2   ARTKQTARKSTGGKAPRKQLATKVARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTEL 61
           A ++ T+ +    + P++  +TK  ++      G ++ H  R G         Y      
Sbjct: 113 ASSETTSEEGQSIQEPKEANSTKAQKQKRRGCRGSRRRHANRRGDSFGDSFTPY------ 166

Query: 62  LIRKLPFQRLMREIAQDFKTDLRFQSSAVMALQEACESYLVGLFEDTNLCVIHAKRVTIM 121
                 F R+++++ Q     L     AV  +       L  +  +      + KRVTI 
Sbjct: 167 ------FPRVLKQVHQG----LSLSQEAVSVMDSMIHDILDRIATEAGQLAHYTKRVTIT 216

Query: 122 PKDIQLARRI 131
            +DIQ+A R+
Sbjct: 217 SRDIQMAVRL 226


>gi|169216635 PREDICTED: H2B histone family, member M [Homo sapiens]
          Length = 257

 Score = 31.2 bits (69), Expect = 0.27
 Identities = 27/130 (20%), Positives = 51/130 (39%), Gaps = 16/130 (12%)

Query: 2   ARTKQTARKSTGGKAPRKQLATKVARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTEL 61
           A ++ T+ +    + P++  +TK  ++      G ++ H  R G         Y      
Sbjct: 113 ASSETTSEEGQSIQEPKEANSTKAQKQKRRGCRGSRRRHANRRGDSFGDSFTPY------ 166

Query: 62  LIRKLPFQRLMREIAQDFKTDLRFQSSAVMALQEACESYLVGLFEDTNLCVIHAKRVTIM 121
                 F R+++++ Q     L     AV  +       L  +  +      + KRVTI 
Sbjct: 167 ------FPRVLKQVHQG----LSLSQEAVSVMDSMIHDILDRIATEAGQLAHYTKRVTIT 216

Query: 122 PKDIQLARRI 131
            +DIQ+A R+
Sbjct: 217 SRDIQMAVRL 226


>gi|4507963 zinc finger protein 37 homolog [Homo sapiens]
          Length = 630

 Score = 31.2 bits (69), Expect = 0.27
 Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 13/87 (14%)

Query: 11  STGGKAPRKQLATKVARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQ- 69
           S G +AP+  + +K+ +  AP  G  K+P +  P  +A    R  QK T+  ++K   Q 
Sbjct: 70  SMGCQAPKPDMISKLEKGEAPWLGKGKRPSQGCPSKIA----RPKQKETDGKVQKDDDQL 125

Query: 70  --------RLMREIAQDFKTDLRFQSS 88
                   +L+RE+A   KT  +   S
Sbjct: 126 ENIQKSQNKLLREVAVKKKTQAKKNGS 152


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.133    0.371 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,571,508
Number of Sequences: 37866
Number of extensions: 171906
Number of successful extensions: 479
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 439
Number of HSP's gapped (non-prelim): 51
length of query: 136
length of database: 18,247,518
effective HSP length: 91
effective length of query: 45
effective length of database: 14,801,712
effective search space: 666077040
effective search space used: 666077040
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.