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Search of human proteins with 4503963
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4503963 glucosaminyl (N-acetyl) transferase 2, I-branching
enzyme isoform B [Homo sapiens]
(400 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4503963 glucosaminyl (N-acetyl) transferase 2, I-branching en... 836 0.0
gi|21717810 glucosaminyl (N-acetyl) transferase 2, I-branching e... 608 e-174
gi|85790495 glucosaminyl (N-acetyl) transferase 2, I-branching e... 606 e-173
gi|190684701 glucosaminyl (N-acetyl) transferase family member 7... 383 e-106
gi|4758422 glucosaminyl (N-acetyl) transferase 3, mucin type [Ho... 298 4e-81
gi|239754233 PREDICTED: glucosaminyl (N-acetyl) transferase 6 [H... 292 4e-79
gi|239748765 PREDICTED: glucosaminyl (N-acetyl) transferase 6 [H... 292 4e-79
gi|239742810 PREDICTED: glucosaminyl (N-acetyl) transferase 6 [H... 292 4e-79
gi|148277035 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,... 285 4e-77
gi|148277033 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,... 285 4e-77
gi|148277031 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,... 285 4e-77
gi|148277029 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,... 285 4e-77
gi|21614523 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6... 285 4e-77
gi|7706127 core 2 beta-1,6-N-acetylglucosaminyltransferase 3 [Ho... 274 9e-74
gi|110611246 xylosyltransferase II [Homo sapiens] 85 1e-16
gi|28269693 xylosyltransferase I [Homo sapiens] 73 4e-13
gi|239749942 PREDICTED: similar to Parkinson disease 7 domain co... 30 3.0
gi|38202214 SEC23-related protein A [Homo sapiens] 30 3.0
gi|32699045 Parkinson disease 7 domain containing 1 [Homo sapiens] 30 3.0
gi|14591924 Sec23 homolog B [Homo sapiens] 30 3.9
gi|14591926 Sec23 homolog B [Homo sapiens] 30 3.9
gi|14591928 Sec23 homolog B [Homo sapiens] 30 3.9
gi|169173184 PREDICTED: hypothetical protein [Homo sapiens] 29 6.6
>gi|4503963 glucosaminyl (N-acetyl) transferase 2, I-branching
enzyme isoform B [Homo sapiens]
Length = 400
Score = 836 bits (2160), Expect = 0.0
Identities = 400/400 (100%), Positives = 400/400 (100%)
Query: 1 MPLSMRYLFIISVSSVIIFIVFSVFNFGGDPSFQRLNISDPLRLTQVCTSFINGKTRFLW 60
MPLSMRYLFIISVSSVIIFIVFSVFNFGGDPSFQRLNISDPLRLTQVCTSFINGKTRFLW
Sbjct: 1 MPLSMRYLFIISVSSVIIFIVFSVFNFGGDPSFQRLNISDPLRLTQVCTSFINGKTRFLW 60
Query: 61 KNKLMIHEKSSCKEYLTQSHYITAPLSKEEADFPLAYIMVIHHHFDTFARLFRAIYMPQN 120
KNKLMIHEKSSCKEYLTQSHYITAPLSKEEADFPLAYIMVIHHHFDTFARLFRAIYMPQN
Sbjct: 61 KNKLMIHEKSSCKEYLTQSHYITAPLSKEEADFPLAYIMVIHHHFDTFARLFRAIYMPQN 120
Query: 121 IYCVHVDEKATTEFKDAVEQLLSCFPNAFLASKMEPVVYGGISRLQADLNCIRDLSAFEV 180
IYCVHVDEKATTEFKDAVEQLLSCFPNAFLASKMEPVVYGGISRLQADLNCIRDLSAFEV
Sbjct: 121 IYCVHVDEKATTEFKDAVEQLLSCFPNAFLASKMEPVVYGGISRLQADLNCIRDLSAFEV 180
Query: 181 SWKYVINTCGQDFPLKTNKEIVQYLKGFKGKNITPGVLPPAHAIGRTKYVHQEHLGKELS 240
SWKYVINTCGQDFPLKTNKEIVQYLKGFKGKNITPGVLPPAHAIGRTKYVHQEHLGKELS
Sbjct: 181 SWKYVINTCGQDFPLKTNKEIVQYLKGFKGKNITPGVLPPAHAIGRTKYVHQEHLGKELS 240
Query: 241 YVIRTTALKPPPPHNLTIYFGSAYVALSREFANFVLHDPRAVDLLQWSKDTFSPDEHFWV 300
YVIRTTALKPPPPHNLTIYFGSAYVALSREFANFVLHDPRAVDLLQWSKDTFSPDEHFWV
Sbjct: 241 YVIRTTALKPPPPHNLTIYFGSAYVALSREFANFVLHDPRAVDLLQWSKDTFSPDEHFWV 300
Query: 301 TLNRIPGVPGSMPNASWTGNLRAIKWSDMEDRHGGCHGHYVHGICIYGNGDLKWLVNSPS 360
TLNRIPGVPGSMPNASWTGNLRAIKWSDMEDRHGGCHGHYVHGICIYGNGDLKWLVNSPS
Sbjct: 301 TLNRIPGVPGSMPNASWTGNLRAIKWSDMEDRHGGCHGHYVHGICIYGNGDLKWLVNSPS 360
Query: 361 LFANKFELNTYPLTVECLELRHRERTLNQSETAIQPSWYF 400
LFANKFELNTYPLTVECLELRHRERTLNQSETAIQPSWYF
Sbjct: 361 LFANKFELNTYPLTVECLELRHRERTLNQSETAIQPSWYF 400
>gi|21717810 glucosaminyl (N-acetyl) transferase 2, I-branching
enzyme isoform A [Homo sapiens]
Length = 402
Score = 608 bits (1567), Expect = e-174
Identities = 291/394 (73%), Positives = 325/394 (82%), Gaps = 1/394 (0%)
Query: 8 LFIISVSSVIIFIVFSVFNFGGDPSFQRLNISDPLRLTQVCTSFINGKTRFLWKNKLMIH 67
LF S+ S +IF+ + F R +S+ L + C GK + +N L
Sbjct: 9 LFSASLISALIFVFVYNTELWENKRFLRAALSNASLLAEACHQIFEGKVFYPTENALKTT 68
Query: 68 -EKSSCKEYLTQSHYITAPLSKEEADFPLAYIMVIHHHFDTFARLFRAIYMPQNIYCVHV 126
++++C EY+ +SHY+T LS+EEA FPLAY + IH F TF RLFRAIYMPQN+YCVH+
Sbjct: 69 LDEATCYEYMVRSHYVTETLSEEEAGFPLAYTVTIHKDFGTFERLFRAIYMPQNVYCVHL 128
Query: 127 DEKATTEFKDAVEQLLSCFPNAFLASKMEPVVYGGISRLQADLNCIRDLSAFEVSWKYVI 186
D+KAT FK AV+QLLSCFPNAFLASK E VVYGGISRLQADLNC+ DL A EV WKYVI
Sbjct: 129 DQKATDAFKGAVKQLLSCFPNAFLASKKESVVYGGISRLQADLNCLEDLVASEVPWKYVI 188
Query: 187 NTCGQDFPLKTNKEIVQYLKGFKGKNITPGVLPPAHAIGRTKYVHQEHLGKELSYVIRTT 246
NTCGQDFPLKTN+EIVQYLKGFKGKNITPGVLPP HA+GRTKYVHQE L + SYVI+TT
Sbjct: 189 NTCGQDFPLKTNREIVQYLKGFKGKNITPGVLPPDHAVGRTKYVHQELLNHKNSYVIKTT 248
Query: 247 ALKPPPPHNLTIYFGSAYVALSREFANFVLHDPRAVDLLQWSKDTFSPDEHFWVTLNRIP 306
LK PPPH++ IYFG+AYVAL+R+FANFVL D A+DLL WSKDT+SPDEHFWVTLNRIP
Sbjct: 249 KLKTPPPHDMVIYFGTAYVALTRDFANFVLQDQLALDLLSWSKDTYSPDEHFWVTLNRIP 308
Query: 307 GVPGSMPNASWTGNLRAIKWSDMEDRHGGCHGHYVHGICIYGNGDLKWLVNSPSLFANKF 366
GVPGSMPNASWTGNLRAIKWSDMEDRHGGCHGHYVHGICIYGNGDLKWLVNSPSLFANKF
Sbjct: 309 GVPGSMPNASWTGNLRAIKWSDMEDRHGGCHGHYVHGICIYGNGDLKWLVNSPSLFANKF 368
Query: 367 ELNTYPLTVECLELRHRERTLNQSETAIQPSWYF 400
ELNTYPLTVECLELRHRERTLNQSETAIQPSWYF
Sbjct: 369 ELNTYPLTVECLELRHRERTLNQSETAIQPSWYF 402
>gi|85790495 glucosaminyl (N-acetyl) transferase 2, I-branching
enzyme isoform C [Homo sapiens]
Length = 402
Score = 606 bits (1563), Expect = e-173
Identities = 292/394 (74%), Positives = 325/394 (82%), Gaps = 2/394 (0%)
Query: 9 FIISVSSVIIFIVFSVFNFGGDPSFQRLNISDPLRLTQV-CTSFINGKTRFLWKNKLMIH 67
F ++ SV+IF+ F S+++LN S + C + FLW+N L
Sbjct: 9 FAFTLLSVVIFVRFYSSQLSPPKSYEKLNSSSERYFRKTACNHALEKMPVFLWENILPSP 68
Query: 68 EKS-SCKEYLTQSHYITAPLSKEEADFPLAYIMVIHHHFDTFARLFRAIYMPQNIYCVHV 126
+S CK+YLTQ+HYIT+PLS+EEA FPLAY+MVIH FDTF RLFRAIYMPQN+YCVHV
Sbjct: 69 LRSVPCKDYLTQNHYITSPLSEEEAAFPLAYVMVIHKDFDTFERLFRAIYMPQNVYCVHV 128
Query: 127 DEKATTEFKDAVEQLLSCFPNAFLASKMEPVVYGGISRLQADLNCIRDLSAFEVSWKYVI 186
DEKA E+K++V QLLSCF NAF+ASK E VVY GISRLQADLNC++DL A EV WKYVI
Sbjct: 129 DEKAPAEYKESVRQLLSCFQNAFIASKTESVVYAGISRLQADLNCLKDLVASEVPWKYVI 188
Query: 187 NTCGQDFPLKTNKEIVQYLKGFKGKNITPGVLPPAHAIGRTKYVHQEHLGKELSYVIRTT 246
NTCGQDFPLKTN+EIVQ+LKGFKGKNITPGVLPP HAI RTKYVHQEH K +V T
Sbjct: 189 NTCGQDFPLKTNREIVQHLKGFKGKNITPGVLPPDHAIKRTKYVHQEHTDKGGFFVKNTN 248
Query: 247 ALKPPPPHNLTIYFGSAYVALSREFANFVLHDPRAVDLLQWSKDTFSPDEHFWVTLNRIP 306
LK PPH LTIYFG+AYVAL+R+F +FVL D RA+DLLQWSKDT+SPDEHFWVTLNR+
Sbjct: 249 ILKTSPPHQLTIYFGTAYVALTRDFVDFVLRDQRAIDLLQWSKDTYSPDEHFWVTLNRVS 308
Query: 307 GVPGSMPNASWTGNLRAIKWSDMEDRHGGCHGHYVHGICIYGNGDLKWLVNSPSLFANKF 366
GVPGSMPNASWTGNLRAIKWSDMEDRHGGCHGHYVHGICIYGNGDLKWLVNSPSLFANKF
Sbjct: 309 GVPGSMPNASWTGNLRAIKWSDMEDRHGGCHGHYVHGICIYGNGDLKWLVNSPSLFANKF 368
Query: 367 ELNTYPLTVECLELRHRERTLNQSETAIQPSWYF 400
ELNTYPLTVECLELRHRERTLNQSETAIQPSWYF
Sbjct: 369 ELNTYPLTVECLELRHRERTLNQSETAIQPSWYF 402
>gi|190684701 glucosaminyl (N-acetyl) transferase family member 7
[Homo sapiens]
Length = 430
Score = 383 bits (984), Expect = e-106
Identities = 180/337 (53%), Positives = 226/337 (67%), Gaps = 2/337 (0%)
Query: 66 IHEKSSCKEYLTQSHYITAPLSKEEADFPLAYIMVIHHHFDTFARLFRAIYMPQNIYCVH 125
+H +C H+IT PLS EE DF LAYI+ IH F +L RAIY+PQN+YC+H
Sbjct: 82 LHTPGNCSRISRGLHFITRPLSAEEGDFSLAYIITIHKELAMFVQLLRAIYVPQNVYCIH 141
Query: 126 VDEKATTEFKDAVEQLLSCFPNAFLASKMEPVVYGGISRLQADLNCIRDLSAFEVSWKYV 185
VDEKA ++K AV+ L++CF N F++SK E V Y G +RLQAD+NC++ L + W YV
Sbjct: 142 VDEKAPMKYKTAVQTLVNCFENVFISSKTEKVAYAGFTRLQADINCMKVLVHSKFQWNYV 201
Query: 186 INTCGQDFPLKTNKEIVQYLKG-FKGKNITPGVLPPAHAIGRTKYVHQEHLGKELSYVIR 244
IN CGQDFP+KTN+EI+ Y++ + KNITPGV+ P H +T H E + K Y
Sbjct: 202 INLCGQDFPIKTNREIIHYIRSKWSDKNITPGVIQPLHIKSKTSQSHLEFVPKGSIYAPP 261
Query: 245 TTALKPPPPHNLTIYFGSAYVALSREFANFVLHDPRAVDLLQWSKDTFSPDEHFWVTLNR 304
K PPHNLTIYFGSAY L+R+F F+L D A D+LQWSKD SP++H+WVTLNR
Sbjct: 262 NNRFKDKPPHNLTIYFGSAYYVLTRKFVEFILTDIHAKDMLQWSKDIRSPEQHYWVTLNR 321
Query: 305 IPGVPGSMPNASWTGNLRAIKWSDMEDR-HGGCHGHYVHGICIYGNGDLKWLVNSPSLFA 363
+ PG+ PNA W GN+RAIK E H GC G YV IC+YG GDL WL+ SPSLFA
Sbjct: 322 LKDAPGATPNAGWEGNVRAIKRKSEEGNVHDGCKGRYVEDICVYGPGDLPWLIQSPSLFA 381
Query: 364 NKFELNTYPLTVECLELRHRERTLNQSETAIQPSWYF 400
NKFE +T PL V CLE RHR + L Q+E I+P W+F
Sbjct: 382 NKFEPSTDPLVVTCLERRHRLQVLRQAEVPIEPHWHF 418
>gi|4758422 glucosaminyl (N-acetyl) transferase 3, mucin type [Homo
sapiens]
Length = 438
Score = 298 bits (764), Expect = 4e-81
Identities = 161/386 (41%), Positives = 223/386 (57%), Gaps = 22/386 (5%)
Query: 24 VFNFGGDPSFQRLNISDPLRLTQ--VCTSFING----KTRFLWKNKLMIHEKSSCKEYLT 77
++NF P+ + +N S R Q V + +N K R + + + C+ +
Sbjct: 56 LYNFLKLPAKRSINCSGVTRGDQEAVLQAILNNLEVKKKREPFTDTHYLSLTRDCEHFKA 115
Query: 78 QSHYITAPLSKEEADFPLAYIMVIHHHFDTFARLFRAIYMPQNIYCVHVDEKATTEFKDA 137
+ +I PLSKEE +FP+AY MVIH + F RL RA+Y PQNIYCVHVDEK+ FK+A
Sbjct: 116 ERKFIQFPLSKEEVEFPIAYSMVIHEKIENFERLLRAVYAPQNIYCVHVDEKSPETFKEA 175
Query: 138 VEQLLSCFPNAFLASKMEPVVYGGISRLQADLNCIRDLSAFEVSWKYVINTCGQDFPLKT 197
V+ ++SCFPN F+ASK+ VVY SR+QADLNC+ DL V WKY +NTCG DFP+K+
Sbjct: 176 VKAIISCFPNVFIASKLVRVVYASWSRVQADLNCMEDLLQSSVPWKYFLNTCGTDFPIKS 235
Query: 198 NKEIVQYLKGFKGKNITPGVLPPAHAIGRTKYVHQEHLGKELSYVIRTTALKPPPPHNLT 257
N E+VQ LK G+N +PP H R KY H E + L T K PPP+NLT
Sbjct: 236 NAEMVQALKMLNGRNSMESEVPPKHKETRWKY-HFEVVRDTLHL---TNKKKDPPPYNLT 291
Query: 258 IYFGSAYVALSREFANFVLHDPRAVDLLQWSKDTFSPDEHFWVTLNRIPGVPGSMPN--- 314
++ G+AY+ SR+F VL +P++ L++W KDT+SPDEH W TL R +PGS+PN
Sbjct: 292 MFTGNAYIVASRDFVQHVLKNPKSQQLIEWVKDTYSPDEHLWATLQRARWMPGSVPNHPK 351
Query: 315 ---ASWTGNLRAIKWS------DMEDRHGGCHGHYVHGICIYGNGDLKWLVNSPSLFANK 365
+ T R +KW D + C G + IC+YG GDL W++ + L ANK
Sbjct: 352 YDISDMTSIARLVKWQGHEGDIDKGAPYAPCSGIHQRAICVYGAGDLNWMLQNHHLLANK 411
Query: 366 FELNTYPLTVECLELRHRERTLNQSE 391
F+ ++CLE R + + +E
Sbjct: 412 FDPKVDDNALQCLEEYLRYKAIYGTE 437
>gi|239754233 PREDICTED: glucosaminyl (N-acetyl) transferase 6 [Homo
sapiens]
Length = 391
Score = 292 bits (747), Expect = 4e-79
Identities = 157/331 (47%), Positives = 213/331 (64%), Gaps = 11/331 (3%)
Query: 7 YLFIISVSSVIIFIVFSVFNFGGDPSFQRLNIS---DPLRLTQVCTSFINGKTRFLWKNK 63
YL II++ +II V + S Q ++ L +C + +NGKT + +
Sbjct: 7 YLCIITLQIIIIVTVLYNVHVSQPDSGQIDDVGGEYQALSRLHICDAALNGKTVQVLPSA 66
Query: 64 LM-IHEKSSCKEYLTQSHYITAPLSKEEADFPLAYIMVIHHHFDTFARLFRAIYMPQNIY 122
L + SC Y+ ++HYIT PLS EEA FPLAY+M I FDTF LF AIYMPQN+Y
Sbjct: 67 LSTMFGIDSCPYYVLENHYITTPLSTEEAAFPLAYVMTISQDFDTFEWLFWAIYMPQNVY 126
Query: 123 CVHVDEKATTEFKDAVEQLLSCFPNAFLASKMEPVVYGGISRLQADLNCIRDLSAFEVSW 182
C+HVD+ AT +FK AV +LL CF NAF++S+ E ++YGG SRLQADL C+RDL A V W
Sbjct: 127 CIHVDKAATIDFKIAVSELLECFSNAFISSQSEYIIYGGKSRLQADLACMRDLIASTVQW 186
Query: 183 KYVINTCGQDFPLKTNKEIVQYLKGFKGKNITPGVLPPAHAIGRTKYVHQEHLGKELSYV 242
+YV NT DFPLKTN+EIVQYLK NITP ++ + R KY H+E+ + ++V
Sbjct: 187 RYVTNTGDHDFPLKTNREIVQYLKTMNWTNITPNLVSVLKSTERIKYTHREYRTRAHAFV 246
Query: 243 IRTTALKPPPPHNLTIYFGSAYVALSREFANFVLHDPRAVDLLQWSKDTFSPDEHFWVTL 302
++ K PPP L I+FGS+YVAL+REF +F L++ A++LLQ S+DT+SPD+HFW+TL
Sbjct: 247 LKKHKKKSPPPRQLKIHFGSSYVALTREFVHFALYNKIAIELLQRSQDTYSPDKHFWITL 306
Query: 303 NRIPGVPGSMPNASWTGNLRAIKWSDMEDRH 333
N IP V G+ P W + A+ ++RH
Sbjct: 307 NNIP-VEGTGP---W---ILAVNSGSCQNRH 330
>gi|239748765 PREDICTED: glucosaminyl (N-acetyl) transferase 6 [Homo
sapiens]
Length = 391
Score = 292 bits (747), Expect = 4e-79
Identities = 157/331 (47%), Positives = 213/331 (64%), Gaps = 11/331 (3%)
Query: 7 YLFIISVSSVIIFIVFSVFNFGGDPSFQRLNIS---DPLRLTQVCTSFINGKTRFLWKNK 63
YL II++ +II V + S Q ++ L +C + +NGKT + +
Sbjct: 7 YLCIITLQIIIIVTVLYNVHVSQPDSGQIDDVGGEYQALSRLHICDAALNGKTVQVLPSA 66
Query: 64 LM-IHEKSSCKEYLTQSHYITAPLSKEEADFPLAYIMVIHHHFDTFARLFRAIYMPQNIY 122
L + SC Y+ ++HYIT PLS EEA FPLAY+M I FDTF LF AIYMPQN+Y
Sbjct: 67 LSTMFGIDSCPYYVLENHYITTPLSTEEAAFPLAYVMTISQDFDTFEWLFWAIYMPQNVY 126
Query: 123 CVHVDEKATTEFKDAVEQLLSCFPNAFLASKMEPVVYGGISRLQADLNCIRDLSAFEVSW 182
C+HVD+ AT +FK AV +LL CF NAF++S+ E ++YGG SRLQADL C+RDL A V W
Sbjct: 127 CIHVDKAATIDFKIAVSELLECFSNAFISSQSEYIIYGGKSRLQADLACMRDLIASTVQW 186
Query: 183 KYVINTCGQDFPLKTNKEIVQYLKGFKGKNITPGVLPPAHAIGRTKYVHQEHLGKELSYV 242
+YV NT DFPLKTN+EIVQYLK NITP ++ + R KY H+E+ + ++V
Sbjct: 187 RYVTNTGDHDFPLKTNREIVQYLKTMNWTNITPNLVSVLKSTERIKYTHREYRTRAHAFV 246
Query: 243 IRTTALKPPPPHNLTIYFGSAYVALSREFANFVLHDPRAVDLLQWSKDTFSPDEHFWVTL 302
++ K PPP L I+FGS+YVAL+REF +F L++ A++LLQ S+DT+SPD+HFW+TL
Sbjct: 247 LKKHKKKSPPPRQLKIHFGSSYVALTREFVHFALYNKIAIELLQRSQDTYSPDKHFWITL 306
Query: 303 NRIPGVPGSMPNASWTGNLRAIKWSDMEDRH 333
N IP V G+ P W + A+ ++RH
Sbjct: 307 NNIP-VEGTGP---W---ILAVNSGSCQNRH 330
>gi|239742810 PREDICTED: glucosaminyl (N-acetyl) transferase 6 [Homo
sapiens]
Length = 391
Score = 292 bits (747), Expect = 4e-79
Identities = 157/331 (47%), Positives = 213/331 (64%), Gaps = 11/331 (3%)
Query: 7 YLFIISVSSVIIFIVFSVFNFGGDPSFQRLNIS---DPLRLTQVCTSFINGKTRFLWKNK 63
YL II++ +II V + S Q ++ L +C + +NGKT + +
Sbjct: 7 YLCIITLQIIIIVTVLYNVHVSQPDSGQIDDVGGEYQALSRLHICDAALNGKTVQVLPSA 66
Query: 64 LM-IHEKSSCKEYLTQSHYITAPLSKEEADFPLAYIMVIHHHFDTFARLFRAIYMPQNIY 122
L + SC Y+ ++HYIT PLS EEA FPLAY+M I FDTF LF AIYMPQN+Y
Sbjct: 67 LSTMFGIDSCPYYVLENHYITTPLSTEEAAFPLAYVMTISQDFDTFEWLFWAIYMPQNVY 126
Query: 123 CVHVDEKATTEFKDAVEQLLSCFPNAFLASKMEPVVYGGISRLQADLNCIRDLSAFEVSW 182
C+HVD+ AT +FK AV +LL CF NAF++S+ E ++YGG SRLQADL C+RDL A V W
Sbjct: 127 CIHVDKAATIDFKIAVSELLECFSNAFISSQSEYIIYGGKSRLQADLACMRDLIASTVQW 186
Query: 183 KYVINTCGQDFPLKTNKEIVQYLKGFKGKNITPGVLPPAHAIGRTKYVHQEHLGKELSYV 242
+YV NT DFPLKTN+EIVQYLK NITP ++ + R KY H+E+ + ++V
Sbjct: 187 RYVTNTGDHDFPLKTNREIVQYLKTMNWTNITPNLVSVLKSTERIKYTHREYRTRAHAFV 246
Query: 243 IRTTALKPPPPHNLTIYFGSAYVALSREFANFVLHDPRAVDLLQWSKDTFSPDEHFWVTL 302
++ K PPP L I+FGS+YVAL+REF +F L++ A++LLQ S+DT+SPD+HFW+TL
Sbjct: 247 LKKHKKKSPPPRQLKIHFGSSYVALTREFVHFALYNKIAIELLQRSQDTYSPDKHFWITL 306
Query: 303 NRIPGVPGSMPNASWTGNLRAIKWSDMEDRH 333
N IP V G+ P W + A+ ++RH
Sbjct: 307 NNIP-VEGTGP---W---ILAVNSGSCQNRH 330
>gi|148277035 beta-1,3-galactosyl-O-glycosyl-glycoprotein
beta-1,6-N-acetylglucosaminyltransferase [Homo sapiens]
Length = 428
Score = 285 bits (730), Expect = 4e-77
Identities = 159/411 (38%), Positives = 230/411 (55%), Gaps = 38/411 (9%)
Query: 6 RYLFIISVSSVIIFIVFSVFNFGGDPSFQRLNISDPLRLTQV-CTSFINGKTRFLWKNKL 64
+Y F++ V S+I F V + S + L ++ + + CT + G + K KL
Sbjct: 16 KYYFMVLVLSLITFSVLRIHQKPEFVSVRHLELAGENPSSDINCTKVLQGDVNEIQKVKL 75
Query: 65 -----------------MIHEKSSCKEYLTQSHYITAPLSKEEADFPLAYIMVIHHHFDT 107
I+ S C ++ + YI PLSKEEA+FP+AY +V+HH +
Sbjct: 76 EILTVKFKKRPRWTPDDYINMTSDCSSFIKRRKYIVEPLSKEEAEFPIAYSIVVHHKIEM 135
Query: 108 FARLFRAIYMPQNIYCVHVDEKATTEFKDAVEQLLSCFPNAFLASKMEPVVYGGISRLQA 167
RL RAIYMPQN YC+HVD K+ + AV + SCF N F+AS++E VVY SR+QA
Sbjct: 136 LDRLLRAIYMPQNFYCIHVDTKSEDSYLAAVMGIASCFSNVFVASRLESVVYASWSRVQA 195
Query: 168 DLNCIRDLSAFEVSWKYVINTCGQDFPLKTNKEIVQYLKGFKGKNITPGVLPPAHAIGRT 227
DLNC++DL A +WKY+IN CG DFP+KTN EIV+ LK G+N P+H R
Sbjct: 196 DLNCMKDLYAMSANWKYLINLCGMDFPIKTNLEIVRKLKLLMGENNLETERMPSHKEERW 255
Query: 228 KYVHQEHLGKELSYVIRTTALKPPPPHNLTIYFGSAYVALSREFANFVLHDPRAVDLLQW 287
K ++ GK + T +K PP ++ GSAY +SRE+ +VL + + L++W
Sbjct: 256 KKRYEVVNGK----LTNTGTVKMLPPLETPLFSGSAYFVVSREYVGYVLQNEKIQKLMEW 311
Query: 288 SKDTFSPDEHFWVTLNRIPGVPGSMPNASWTGNL-------RAIKWSDMEDR------HG 334
++DT+SPDE+ W T+ RIP VPGS+P AS +L R +KW E +
Sbjct: 312 AQDTYSPDEYLWATIQRIPEVPGSLP-ASHKYDLSDMQAVARFVKWQYFEGDVSKGAPYP 370
Query: 335 GCHGHYVHGICIYGNGDLKWLVNSPSLFANKFELNTYPLTVECLE--LRHR 383
C G +V +CI+G GDL W++ LFANKF+++ ++CL+ LRH+
Sbjct: 371 PCDGVHVRSVCIFGAGDLNWMLRKHHLFANKFDVDVDLFAIQCLDEHLRHK 421
>gi|148277033 beta-1,3-galactosyl-O-glycosyl-glycoprotein
beta-1,6-N-acetylglucosaminyltransferase [Homo sapiens]
Length = 428
Score = 285 bits (730), Expect = 4e-77
Identities = 159/411 (38%), Positives = 230/411 (55%), Gaps = 38/411 (9%)
Query: 6 RYLFIISVSSVIIFIVFSVFNFGGDPSFQRLNISDPLRLTQV-CTSFINGKTRFLWKNKL 64
+Y F++ V S+I F V + S + L ++ + + CT + G + K KL
Sbjct: 16 KYYFMVLVLSLITFSVLRIHQKPEFVSVRHLELAGENPSSDINCTKVLQGDVNEIQKVKL 75
Query: 65 -----------------MIHEKSSCKEYLTQSHYITAPLSKEEADFPLAYIMVIHHHFDT 107
I+ S C ++ + YI PLSKEEA+FP+AY +V+HH +
Sbjct: 76 EILTVKFKKRPRWTPDDYINMTSDCSSFIKRRKYIVEPLSKEEAEFPIAYSIVVHHKIEM 135
Query: 108 FARLFRAIYMPQNIYCVHVDEKATTEFKDAVEQLLSCFPNAFLASKMEPVVYGGISRLQA 167
RL RAIYMPQN YC+HVD K+ + AV + SCF N F+AS++E VVY SR+QA
Sbjct: 136 LDRLLRAIYMPQNFYCIHVDTKSEDSYLAAVMGIASCFSNVFVASRLESVVYASWSRVQA 195
Query: 168 DLNCIRDLSAFEVSWKYVINTCGQDFPLKTNKEIVQYLKGFKGKNITPGVLPPAHAIGRT 227
DLNC++DL A +WKY+IN CG DFP+KTN EIV+ LK G+N P+H R
Sbjct: 196 DLNCMKDLYAMSANWKYLINLCGMDFPIKTNLEIVRKLKLLMGENNLETERMPSHKEERW 255
Query: 228 KYVHQEHLGKELSYVIRTTALKPPPPHNLTIYFGSAYVALSREFANFVLHDPRAVDLLQW 287
K ++ GK + T +K PP ++ GSAY +SRE+ +VL + + L++W
Sbjct: 256 KKRYEVVNGK----LTNTGTVKMLPPLETPLFSGSAYFVVSREYVGYVLQNEKIQKLMEW 311
Query: 288 SKDTFSPDEHFWVTLNRIPGVPGSMPNASWTGNL-------RAIKWSDMEDR------HG 334
++DT+SPDE+ W T+ RIP VPGS+P AS +L R +KW E +
Sbjct: 312 AQDTYSPDEYLWATIQRIPEVPGSLP-ASHKYDLSDMQAVARFVKWQYFEGDVSKGAPYP 370
Query: 335 GCHGHYVHGICIYGNGDLKWLVNSPSLFANKFELNTYPLTVECLE--LRHR 383
C G +V +CI+G GDL W++ LFANKF+++ ++CL+ LRH+
Sbjct: 371 PCDGVHVRSVCIFGAGDLNWMLRKHHLFANKFDVDVDLFAIQCLDEHLRHK 421
>gi|148277031 beta-1,3-galactosyl-O-glycosyl-glycoprotein
beta-1,6-N-acetylglucosaminyltransferase [Homo sapiens]
Length = 428
Score = 285 bits (730), Expect = 4e-77
Identities = 159/411 (38%), Positives = 230/411 (55%), Gaps = 38/411 (9%)
Query: 6 RYLFIISVSSVIIFIVFSVFNFGGDPSFQRLNISDPLRLTQV-CTSFINGKTRFLWKNKL 64
+Y F++ V S+I F V + S + L ++ + + CT + G + K KL
Sbjct: 16 KYYFMVLVLSLITFSVLRIHQKPEFVSVRHLELAGENPSSDINCTKVLQGDVNEIQKVKL 75
Query: 65 -----------------MIHEKSSCKEYLTQSHYITAPLSKEEADFPLAYIMVIHHHFDT 107
I+ S C ++ + YI PLSKEEA+FP+AY +V+HH +
Sbjct: 76 EILTVKFKKRPRWTPDDYINMTSDCSSFIKRRKYIVEPLSKEEAEFPIAYSIVVHHKIEM 135
Query: 108 FARLFRAIYMPQNIYCVHVDEKATTEFKDAVEQLLSCFPNAFLASKMEPVVYGGISRLQA 167
RL RAIYMPQN YC+HVD K+ + AV + SCF N F+AS++E VVY SR+QA
Sbjct: 136 LDRLLRAIYMPQNFYCIHVDTKSEDSYLAAVMGIASCFSNVFVASRLESVVYASWSRVQA 195
Query: 168 DLNCIRDLSAFEVSWKYVINTCGQDFPLKTNKEIVQYLKGFKGKNITPGVLPPAHAIGRT 227
DLNC++DL A +WKY+IN CG DFP+KTN EIV+ LK G+N P+H R
Sbjct: 196 DLNCMKDLYAMSANWKYLINLCGMDFPIKTNLEIVRKLKLLMGENNLETERMPSHKEERW 255
Query: 228 KYVHQEHLGKELSYVIRTTALKPPPPHNLTIYFGSAYVALSREFANFVLHDPRAVDLLQW 287
K ++ GK + T +K PP ++ GSAY +SRE+ +VL + + L++W
Sbjct: 256 KKRYEVVNGK----LTNTGTVKMLPPLETPLFSGSAYFVVSREYVGYVLQNEKIQKLMEW 311
Query: 288 SKDTFSPDEHFWVTLNRIPGVPGSMPNASWTGNL-------RAIKWSDMEDR------HG 334
++DT+SPDE+ W T+ RIP VPGS+P AS +L R +KW E +
Sbjct: 312 AQDTYSPDEYLWATIQRIPEVPGSLP-ASHKYDLSDMQAVARFVKWQYFEGDVSKGAPYP 370
Query: 335 GCHGHYVHGICIYGNGDLKWLVNSPSLFANKFELNTYPLTVECLE--LRHR 383
C G +V +CI+G GDL W++ LFANKF+++ ++CL+ LRH+
Sbjct: 371 PCDGVHVRSVCIFGAGDLNWMLRKHHLFANKFDVDVDLFAIQCLDEHLRHK 421
>gi|148277029 beta-1,3-galactosyl-O-glycosyl-glycoprotein
beta-1,6-N-acetylglucosaminyltransferase [Homo sapiens]
Length = 428
Score = 285 bits (730), Expect = 4e-77
Identities = 159/411 (38%), Positives = 230/411 (55%), Gaps = 38/411 (9%)
Query: 6 RYLFIISVSSVIIFIVFSVFNFGGDPSFQRLNISDPLRLTQV-CTSFINGKTRFLWKNKL 64
+Y F++ V S+I F V + S + L ++ + + CT + G + K KL
Sbjct: 16 KYYFMVLVLSLITFSVLRIHQKPEFVSVRHLELAGENPSSDINCTKVLQGDVNEIQKVKL 75
Query: 65 -----------------MIHEKSSCKEYLTQSHYITAPLSKEEADFPLAYIMVIHHHFDT 107
I+ S C ++ + YI PLSKEEA+FP+AY +V+HH +
Sbjct: 76 EILTVKFKKRPRWTPDDYINMTSDCSSFIKRRKYIVEPLSKEEAEFPIAYSIVVHHKIEM 135
Query: 108 FARLFRAIYMPQNIYCVHVDEKATTEFKDAVEQLLSCFPNAFLASKMEPVVYGGISRLQA 167
RL RAIYMPQN YC+HVD K+ + AV + SCF N F+AS++E VVY SR+QA
Sbjct: 136 LDRLLRAIYMPQNFYCIHVDTKSEDSYLAAVMGIASCFSNVFVASRLESVVYASWSRVQA 195
Query: 168 DLNCIRDLSAFEVSWKYVINTCGQDFPLKTNKEIVQYLKGFKGKNITPGVLPPAHAIGRT 227
DLNC++DL A +WKY+IN CG DFP+KTN EIV+ LK G+N P+H R
Sbjct: 196 DLNCMKDLYAMSANWKYLINLCGMDFPIKTNLEIVRKLKLLMGENNLETERMPSHKEERW 255
Query: 228 KYVHQEHLGKELSYVIRTTALKPPPPHNLTIYFGSAYVALSREFANFVLHDPRAVDLLQW 287
K ++ GK + T +K PP ++ GSAY +SRE+ +VL + + L++W
Sbjct: 256 KKRYEVVNGK----LTNTGTVKMLPPLETPLFSGSAYFVVSREYVGYVLQNEKIQKLMEW 311
Query: 288 SKDTFSPDEHFWVTLNRIPGVPGSMPNASWTGNL-------RAIKWSDMEDR------HG 334
++DT+SPDE+ W T+ RIP VPGS+P AS +L R +KW E +
Sbjct: 312 AQDTYSPDEYLWATIQRIPEVPGSLP-ASHKYDLSDMQAVARFVKWQYFEGDVSKGAPYP 370
Query: 335 GCHGHYVHGICIYGNGDLKWLVNSPSLFANKFELNTYPLTVECLE--LRHR 383
C G +V +CI+G GDL W++ LFANKF+++ ++CL+ LRH+
Sbjct: 371 PCDGVHVRSVCIFGAGDLNWMLRKHHLFANKFDVDVDLFAIQCLDEHLRHK 421
>gi|21614523 beta-1,3-galactosyl-O-glycosyl-glycoprotein
beta-1,6-N-acetylglucosaminyltransferase [Homo sapiens]
Length = 428
Score = 285 bits (730), Expect = 4e-77
Identities = 159/411 (38%), Positives = 230/411 (55%), Gaps = 38/411 (9%)
Query: 6 RYLFIISVSSVIIFIVFSVFNFGGDPSFQRLNISDPLRLTQV-CTSFINGKTRFLWKNKL 64
+Y F++ V S+I F V + S + L ++ + + CT + G + K KL
Sbjct: 16 KYYFMVLVLSLITFSVLRIHQKPEFVSVRHLELAGENPSSDINCTKVLQGDVNEIQKVKL 75
Query: 65 -----------------MIHEKSSCKEYLTQSHYITAPLSKEEADFPLAYIMVIHHHFDT 107
I+ S C ++ + YI PLSKEEA+FP+AY +V+HH +
Sbjct: 76 EILTVKFKKRPRWTPDDYINMTSDCSSFIKRRKYIVEPLSKEEAEFPIAYSIVVHHKIEM 135
Query: 108 FARLFRAIYMPQNIYCVHVDEKATTEFKDAVEQLLSCFPNAFLASKMEPVVYGGISRLQA 167
RL RAIYMPQN YC+HVD K+ + AV + SCF N F+AS++E VVY SR+QA
Sbjct: 136 LDRLLRAIYMPQNFYCIHVDTKSEDSYLAAVMGIASCFSNVFVASRLESVVYASWSRVQA 195
Query: 168 DLNCIRDLSAFEVSWKYVINTCGQDFPLKTNKEIVQYLKGFKGKNITPGVLPPAHAIGRT 227
DLNC++DL A +WKY+IN CG DFP+KTN EIV+ LK G+N P+H R
Sbjct: 196 DLNCMKDLYAMSANWKYLINLCGMDFPIKTNLEIVRKLKLLMGENNLETERMPSHKEERW 255
Query: 228 KYVHQEHLGKELSYVIRTTALKPPPPHNLTIYFGSAYVALSREFANFVLHDPRAVDLLQW 287
K ++ GK + T +K PP ++ GSAY +SRE+ +VL + + L++W
Sbjct: 256 KKRYEVVNGK----LTNTGTVKMLPPLETPLFSGSAYFVVSREYVGYVLQNEKIQKLMEW 311
Query: 288 SKDTFSPDEHFWVTLNRIPGVPGSMPNASWTGNL-------RAIKWSDMEDR------HG 334
++DT+SPDE+ W T+ RIP VPGS+P AS +L R +KW E +
Sbjct: 312 AQDTYSPDEYLWATIQRIPEVPGSLP-ASHKYDLSDMQAVARFVKWQYFEGDVSKGAPYP 370
Query: 335 GCHGHYVHGICIYGNGDLKWLVNSPSLFANKFELNTYPLTVECLE--LRHR 383
C G +V +CI+G GDL W++ LFANKF+++ ++CL+ LRH+
Sbjct: 371 PCDGVHVRSVCIFGAGDLNWMLRKHHLFANKFDVDVDLFAIQCLDEHLRHK 421
>gi|7706127 core 2 beta-1,6-N-acetylglucosaminyltransferase 3 [Homo
sapiens]
Length = 453
Score = 274 bits (701), Expect = 9e-74
Identities = 142/325 (43%), Positives = 184/325 (56%), Gaps = 10/325 (3%)
Query: 70 SSCKEYLTQSHYITAPLSKEEADFPLAYIMVIHHHFDTFARLFRAIYMPQNIYCVHVDEK 129
S C Y T Y +SKEE FP+AY +V+H RL AIY NIYC+H D K
Sbjct: 108 SDCDIYQTLRGYAQKLVSKEEKSFPIAYSLVVHKDAIMVERLIHAIYNQHNIYCIHYDRK 167
Query: 130 ATTEFKDAVEQLLSCFPNAFLASKMEPVVYGGISRLQADLNCIRDLSAFEVSWKYVINTC 189
A FK A+ L CF N F+ASK+E V Y ISRLQADLNC+ DL + WKYVIN C
Sbjct: 168 APDTFKVAMNNLAKCFSNIFIASKLEAVEYAHISRLQADLNCLSDLLKSSIQWKYVINLC 227
Query: 190 GQDFPLKTNKEIVQYLKGFKGKNITPGVLPPAHAIGRTKYVHQEHLGKELSYV---IRTT 246
GQDFPLK+N E+V LK G N+ V PP + R Y H E YV IRT
Sbjct: 228 GQDFPLKSNFELVSELKKLNGANMLETVKPPNSKLERFTY-HHELRRVPYEYVKLPIRTN 286
Query: 247 ALKPPPPHNLTIYFGSAYVALSREFANFVLHDPRAVDLLQWSKDTFSPDEHFWVTLNRIP 306
K PPHN+ I+ GSAY LS+ F ++ ++ D WSKDT+SPDEHFW TL R+P
Sbjct: 287 ISKEAPPHNIQIFVGSAYFVLSQAFVKYIFNNSIVQDFFAWSKDTYSPDEHFWATLIRVP 346
Query: 307 GVPGSMPNAS-----WTGNLRAIKWSDMED-RHGGCHGHYVHGICIYGNGDLKWLVNSPS 360
G+PG + ++ R +KW+ E + C G ++ +CIYG +L+WL+
Sbjct: 347 GIPGEISRSAQDVSDLQSKTRLVKWNYYEGFFYPSCTGSHLRSVCIYGAAELRWLIKDGH 406
Query: 361 LFANKFELNTYPLTVECLELRHRER 385
FANKF+ P+ ++CL + E+
Sbjct: 407 WFANKFDSKVDPILIKCLAEKLEEQ 431
>gi|110611246 xylosyltransferase II [Homo sapiens]
Length = 865
Score = 84.7 bits (208), Expect = 1e-16
Identities = 80/305 (26%), Positives = 138/305 (45%), Gaps = 39/305 (12%)
Query: 95 LAYIMVIHHH-FDTFARLFRAIYMPQNIYCVHVDEKATTEFKDAVEQLLSCFPNAFLASK 153
+AY++V+H RL +A+Y Q+ + +HVD+++ ++ VE L + N +
Sbjct: 234 IAYMLVVHGRAIRQLKRLLKAVYHEQHFFYIHVDKRSDYLHREVVE-LAQGYDNVRVTPW 292
Query: 154 MEPVVYGGISRLQADLNCIRDLSAFEV---SWKYVINTCGQDFPLKTNKEIVQYLKGFKG 210
++GG S L+ L +RDL EV +W + IN D+P +TN+E+V +L +
Sbjct: 293 RMVTIWGGASLLRMYLRSMRDL--LEVPGWAWDFFINLSATDYPTRTNEELVAFLSKNRD 350
Query: 211 KNITPGVLPPAHAIGRTKYVHQEHLGKEL----SYVIRTTALKPPPPHNLTIYFGSAYVA 266
KN +H ++++ ++ L + S++ R + P + + GS +
Sbjct: 351 KNFL-----KSHGRDNSRFIKKQGLDRLFHECDSHMWRLGERQIPA--GIVVDGGSDWFV 403
Query: 267 LSREFANFVLH--DPRAVDLLQWSKDTFSPDEHFWVTLNRIPGVPGSMPNASWT-GNLRA 323
L+R F +V++ DP L Q+ T P E F+ T+ + S+ + NLR
Sbjct: 404 LTRSFVEYVVYTDDPLVAQLRQFYTYTLLPAESFFHTV-----LENSLACETLVDNNLRV 458
Query: 324 IKWSDMEDRHGGCHGHYVHGI--CIYGNGDLK-------WLVNSPSLFANKFELNTYPLT 374
W +R GC Y H + C D K V+ P+ FA KFE
Sbjct: 459 TNW----NRKLGCKCQYKHIVDWCGCSPNDFKPQDFLRLQQVSRPTFFARKFESTVNQEV 514
Query: 375 VECLE 379
+E L+
Sbjct: 515 LEILD 519
>gi|28269693 xylosyltransferase I [Homo sapiens]
Length = 959
Score = 73.2 bits (178), Expect = 4e-13
Identities = 70/291 (24%), Positives = 123/291 (42%), Gaps = 35/291 (12%)
Query: 95 LAYIMVIHHHFDT-FARLFRAIYMPQNIYCVHVDEKATTEFKDAVEQLLSCFPNAFLASK 153
+A+++V+H R+F+AIY + Y +HVD+++ + + Q+ + N +
Sbjct: 328 IAFVLVVHGRASRQLQRMFKAIYHKDHFYYIHVDKRSNYLHRQVL-QVSRQYSNVRVTPW 386
Query: 154 MEPVVYGGISRLQADLNCIRDLSAF-EVSWKYVINTCGQDFPLKTNKEIVQYLKGFKGKN 212
++GG S L L +RDL + W + IN D+P++TN ++V +L ++ N
Sbjct: 387 RMATIWGGASLLSTYLQSMRDLLEMTDWPWDFFINLSAADYPIRTNDQLVAFLSRYRDMN 446
Query: 213 ITPGVLPPAHAIGRTKYVHQEHLGKEL----SYVIRTTALKPPPPHNLTIYFGSAYVALS 268
+H +++ ++ L + +++ R + P + + GS + L+
Sbjct: 447 FL-----KSHGRDNARFIRKQGLDRLFLECDAHMWRLGDRR--IPEGIAVDGGSDWFLLN 499
Query: 269 REFANFVLH--DPRAVDLLQWSKDTFSPDEHFWVT-LNRIPGVPGSMPNASWTGNLRAIK 325
R F +V D + Q+ T P E F+ T L P + N NLR
Sbjct: 500 RRFVEYVTFSTDDLVTKMKQFYSYTLLPAESFFHTVLENSPHCDTMVDN-----NLRITN 554
Query: 326 WSDMEDRHGGCHGHYVHGI--CIYGNGDLK-------WLVNSPSLFANKFE 367
W +R GC Y H + C D K P+ FA KFE
Sbjct: 555 W----NRKLGCKCQYKHIVDWCGCSPNDFKPQDFHRFQQTARPTFFARKFE 601
>gi|239749942 PREDICTED: similar to Parkinson disease 7 domain
containing 1 isoform 2 [Homo sapiens]
Length = 219
Score = 30.4 bits (67), Expect = 3.0
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 305 IPGVPGSMPNASWTGNL-RAIKWSDMEDRHGGCHGHYVHGICIYGNGDLKWLVNSPSL 361
IP PG++ + + +G+L R ++ E + GH V +C N D W+ +S SL
Sbjct: 91 IPSCPGALTDLASSGSLARILQHFHSESKPICAVGHGVAALCCATNEDRSWVFDSYSL 148
>gi|38202214 SEC23-related protein A [Homo sapiens]
Length = 765
Score = 30.4 bits (67), Expect = 3.0
Identities = 30/107 (28%), Positives = 44/107 (41%), Gaps = 25/107 (23%)
Query: 156 PVVYGGISRLQADLNCIRDLSAFE----------VSWKYVINTCGQDFPLKTNKEIVQYL 205
P Y GIS L + S+ E + + YV++TC +D L+ KE +Q
Sbjct: 95 PPSYAGISELNQPAELLPQFSSIEYVVLRGPQMPLIFLYVVDTCMEDEDLQALKESMQ-- 152
Query: 206 KGFKGKNITPGVLPPAHAIGRTKY---VHQEHLGKE---LSYVIRTT 246
++ +LPP +G + V LG E SYV R T
Sbjct: 153 -------MSLSLLPPTALVGLITFGRMVQVHELGCEGISKSYVFRGT 192
>gi|32699045 Parkinson disease 7 domain containing 1 [Homo sapiens]
Length = 220
Score = 30.4 bits (67), Expect = 3.0
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 305 IPGVPGSMPNASWTGNL-RAIKWSDMEDRHGGCHGHYVHGICIYGNGDLKWLVNSPSL 361
IP PG++ + + +G+L R ++ E + GH V +C N D W+ +S SL
Sbjct: 91 IPSCPGALTDLASSGSLARILQHFHSESKPICAVGHGVAALCCATNEDRSWVFDSYSL 148
>gi|14591924 Sec23 homolog B [Homo sapiens]
Length = 767
Score = 30.0 bits (66), Expect = 3.9
Identities = 28/102 (27%), Positives = 40/102 (39%), Gaps = 15/102 (14%)
Query: 156 PVVYGGISRLQADLNCIRDLSAFE----------VSWKYVINTCGQDFPLKTNKEIVQYL 205
P YGGIS + + S E + + YV++TC ++ L+ KE +Q
Sbjct: 95 PPAYGGISEVNQPAELMPQFSTIEYVIQRGAQSPLIFLYVVDTCLEEDDLQALKESLQMS 154
Query: 206 KGFKGKNITPGVLPPAHAIGRTKYVHQEHL-GKELSYVIRTT 246
+ P L GR VH+ G SYV R T
Sbjct: 155 LSL----LPPDALVGLITFGRMVQVHELSCEGISKSYVFRGT 192
>gi|14591926 Sec23 homolog B [Homo sapiens]
Length = 767
Score = 30.0 bits (66), Expect = 3.9
Identities = 28/102 (27%), Positives = 40/102 (39%), Gaps = 15/102 (14%)
Query: 156 PVVYGGISRLQADLNCIRDLSAFE----------VSWKYVINTCGQDFPLKTNKEIVQYL 205
P YGGIS + + S E + + YV++TC ++ L+ KE +Q
Sbjct: 95 PPAYGGISEVNQPAELMPQFSTIEYVIQRGAQSPLIFLYVVDTCLEEDDLQALKESLQMS 154
Query: 206 KGFKGKNITPGVLPPAHAIGRTKYVHQEHL-GKELSYVIRTT 246
+ P L GR VH+ G SYV R T
Sbjct: 155 LSL----LPPDALVGLITFGRMVQVHELSCEGISKSYVFRGT 192
>gi|14591928 Sec23 homolog B [Homo sapiens]
Length = 767
Score = 30.0 bits (66), Expect = 3.9
Identities = 28/102 (27%), Positives = 40/102 (39%), Gaps = 15/102 (14%)
Query: 156 PVVYGGISRLQADLNCIRDLSAFE----------VSWKYVINTCGQDFPLKTNKEIVQYL 205
P YGGIS + + S E + + YV++TC ++ L+ KE +Q
Sbjct: 95 PPAYGGISEVNQPAELMPQFSTIEYVIQRGAQSPLIFLYVVDTCLEEDDLQALKESLQMS 154
Query: 206 KGFKGKNITPGVLPPAHAIGRTKYVHQEHL-GKELSYVIRTT 246
+ P L GR VH+ G SYV R T
Sbjct: 155 LSL----LPPDALVGLITFGRMVQVHELSCEGISKSYVFRGT 192
>gi|169173184 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1230
Score = 29.3 bits (64), Expect = 6.6
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 246 TALKPPPPHNLTIYFGSAYVALSREFANFVLHDPRAVDL-LQWSKDTFSPD 295
T+ K PPPH+ GS+ +A R A +L D R+V +W + S D
Sbjct: 1158 TSPKKPPPHSGPSVTGSSPLAAVRALALPILRDHRSVSSPTRWKRTFISTD 1208
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.138 0.442
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,621,285
Number of Sequences: 37866
Number of extensions: 763387
Number of successful extensions: 1378
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1342
Number of HSP's gapped (non-prelim): 28
length of query: 400
length of database: 18,247,518
effective HSP length: 104
effective length of query: 296
effective length of database: 14,309,454
effective search space: 4235598384
effective search space used: 4235598384
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.