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Search of human proteins with 4503083
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4503083 chorionic somatomammotropin hormone 1 isoform 1
[Homo sapiens]
(217 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4503083 chorionic somatomammotropin hormone 1 isoform 1 [Homo... 441 e-124
gi|10334861 chorionic somatomammotropin hormone 2 isoform 1 [Hom... 438 e-123
gi|12545376 chorionic somatomammotropin hormone-like 1 isoform 1... 392 e-109
gi|13027812 growth hormone 1 isoform 1 [Homo sapiens] 375 e-104
gi|4503991 growth hormone 2 isoform 1 [Homo sapiens] 344 3e-95
gi|12545381 chorionic somatomammotropin hormone-like 1 isoform 2... 343 5e-95
gi|13027814 growth hormone 1 isoform 2 [Homo sapiens] 339 9e-94
gi|13027822 growth hormone 2 isoform 4 [Homo sapiens] 313 9e-86
gi|12408685 chorionic somatomammotropin hormone 1 isoform 2 [Hom... 306 7e-84
gi|12408692 chorionic somatomammotropin hormone 2 isoform 2 [Hom... 303 6e-83
gi|13027816 growth hormone 1 isoform 3 [Homo sapiens] 289 1e-78
gi|12545378 chorionic somatomammotropin hormone-like 1 isoform 4... 253 1e-67
gi|38201628 chorionic somatomammotropin hormone-like 1 isoform 3... 239 2e-63
gi|13027826 growth hormone 2 isoform 3 [Homo sapiens] 226 9e-60
gi|13027824 growth hormone 2 isoform 2 [Homo sapiens] 226 1e-59
gi|239756908 PREDICTED: similar to chorionic somatomammotropin h... 201 4e-52
gi|12408687 chorionic somatomammotropin hormone 1 isoform 3 [Hom... 139 2e-33
gi|12408694 chorionic somatomammotropin hormone 2 isoform 3 [Hom... 139 2e-33
gi|13027818 growth hormone 1 isoform 4 [Homo sapiens] 129 1e-30
gi|4506105 prolactin precursor [Homo sapiens] 69 2e-12
gi|34452709 bromodomain containing 8 isoform 3 [Homo sapiens] 31 0.92
gi|34452707 bromodomain containing 8 isoform 2 [Homo sapiens] 31 0.92
gi|34452705 bromodomain containing 8 isoform 1 [Homo sapiens] 31 0.92
gi|126032338 ryanodine receptor 3 [Homo sapiens] 30 1.2
gi|112799847 cardiac muscle ryanodine receptor [Homo sapiens] 30 1.6
gi|10863937 tumor necrosis factor, alpha-induced protein 1 [Homo... 30 1.6
gi|5032281 dystrophin Dp427c isoform [Homo sapiens] 30 2.1
gi|5032315 dystrophin Dp427p2 isoform [Homo sapiens] 30 2.1
gi|5032287 dystrophin Dp427p1 isoform [Homo sapiens] 30 2.1
gi|5032285 dystrophin Dp427l isoform [Homo sapiens] 30 2.1
>gi|4503083 chorionic somatomammotropin hormone 1 isoform 1 [Homo
sapiens]
Length = 217
Score = 441 bits (1134), Expect = e-124
Identities = 217/217 (100%), Positives = 217/217 (100%)
Query: 1 MAPGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEET 60
MAPGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEET
Sbjct: 1 MAPGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEET 60
Query: 61 YIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLR 120
YIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLR
Sbjct: 61 YIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLR 120
Query: 121 SMFANNLVYDTSDSDDYHLLKDLEEGIQTLMGRLEDGSRRTGQILKQTYSKFDTNSHNHD 180
SMFANNLVYDTSDSDDYHLLKDLEEGIQTLMGRLEDGSRRTGQILKQTYSKFDTNSHNHD
Sbjct: 121 SMFANNLVYDTSDSDDYHLLKDLEEGIQTLMGRLEDGSRRTGQILKQTYSKFDTNSHNHD 180
Query: 181 ALLKNYGLLYCFRKDMDKVETFLRMVQCRSVEGSCGF 217
ALLKNYGLLYCFRKDMDKVETFLRMVQCRSVEGSCGF
Sbjct: 181 ALLKNYGLLYCFRKDMDKVETFLRMVQCRSVEGSCGF 217
>gi|10334861 chorionic somatomammotropin hormone 2 isoform 1 [Homo
sapiens]
Length = 217
Score = 438 bits (1126), Expect = e-123
Identities = 216/217 (99%), Positives = 216/217 (99%)
Query: 1 MAPGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEET 60
MA GSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEET
Sbjct: 1 MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEET 60
Query: 61 YIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLR 120
YIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLR
Sbjct: 61 YIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLR 120
Query: 121 SMFANNLVYDTSDSDDYHLLKDLEEGIQTLMGRLEDGSRRTGQILKQTYSKFDTNSHNHD 180
SMFANNLVYDTSDSDDYHLLKDLEEGIQTLMGRLEDGSRRTGQILKQTYSKFDTNSHNHD
Sbjct: 121 SMFANNLVYDTSDSDDYHLLKDLEEGIQTLMGRLEDGSRRTGQILKQTYSKFDTNSHNHD 180
Query: 181 ALLKNYGLLYCFRKDMDKVETFLRMVQCRSVEGSCGF 217
ALLKNYGLLYCFRKDMDKVETFLRMVQCRSVEGSCGF
Sbjct: 181 ALLKNYGLLYCFRKDMDKVETFLRMVQCRSVEGSCGF 217
>gi|12545376 chorionic somatomammotropin hormone-like 1 isoform 1
precursor [Homo sapiens]
Length = 222
Score = 392 bits (1006), Expect = e-109
Identities = 200/222 (90%), Positives = 202/222 (90%), Gaps = 5/222 (2%)
Query: 1 MAPGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEF--- 57
MA GSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLF AMLQAHRAHQLAIDTYQEF
Sbjct: 1 MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFKEAMLQAHRAHQLAIDTYQEFISS 60
Query: 58 --EETYIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEP 115
E YI K+QKYSFLHDSQTSFCFSDSIPT SNMEETQQKSNLELL ISLLLIES LEP
Sbjct: 61 WGMEAYITKEQKYSFLHDSQTSFCFSDSIPTSSNMEETQQKSNLELLHISLLLIESRLEP 120
Query: 116 VRFLRSMFANNLVYDTSDSDDYHLLKDLEEGIQTLMGRLEDGSRRTGQILKQTYSKFDTN 175
VRFLRS F NNLVYDTSDSDDYHLLKDLEEGIQ LMGRLEDGS TGQ LKQTYSKFDTN
Sbjct: 121 VRFLRSTFTNNLVYDTSDSDDYHLLKDLEEGIQMLMGRLEDGSHLTGQTLKQTYSKFDTN 180
Query: 176 SHNHDALLKNYGLLYCFRKDMDKVETFLRMVQCRSVEGSCGF 217
SHNHDALLKNYGLL+CFRKDMDKVETFLRMVQCRSVEGSCGF
Sbjct: 181 SHNHDALLKNYGLLHCFRKDMDKVETFLRMVQCRSVEGSCGF 222
>gi|13027812 growth hormone 1 isoform 1 [Homo sapiens]
Length = 217
Score = 375 bits (962), Expect = e-104
Identities = 185/217 (85%), Positives = 197/217 (90%)
Query: 1 MAPGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEET 60
MA GSRTSLLLAF LLCLPWLQE A T+PLSRLFD+AML+AHR HQLA DTYQEFEE
Sbjct: 1 MATGSRTSLLLAFGLLCLPWLQEGSAFPTIPLSRLFDNAMLRAHRLHQLAFDTYQEFEEA 60
Query: 61 YIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLR 120
YIPK+QKYSFL + QTS CFS+SIPTPSN EETQQKSNLELLRISLLLI+SWLEPV+FLR
Sbjct: 61 YIPKEQKYSFLQNPQTSLCFSESIPTPSNREETQQKSNLELLRISLLLIQSWLEPVQFLR 120
Query: 121 SMFANNLVYDTSDSDDYHLLKDLEEGIQTLMGRLEDGSRRTGQILKQTYSKFDTNSHNHD 180
S+FAN+LVY SDS+ Y LLKDLEEGIQTLMGRLEDGS RTGQI KQTYSKFDTNSHN D
Sbjct: 121 SVFANSLVYGASDSNVYDLLKDLEEGIQTLMGRLEDGSPRTGQIFKQTYSKFDTNSHNDD 180
Query: 181 ALLKNYGLLYCFRKDMDKVETFLRMVQCRSVEGSCGF 217
ALLKNYGLLYCFRKDMDKVETFLR+VQCRSVEGSCGF
Sbjct: 181 ALLKNYGLLYCFRKDMDKVETFLRIVQCRSVEGSCGF 217
>gi|4503991 growth hormone 2 isoform 1 [Homo sapiens]
Length = 217
Score = 344 bits (883), Expect = 3e-95
Identities = 173/217 (79%), Positives = 188/217 (86%)
Query: 1 MAPGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEET 60
MA GSRTSLLLAF LLCL WLQE A T+PLSRLFD+AML+A R +QLA DTYQEFEE
Sbjct: 1 MAAGSRTSLLLAFGLLCLSWLQEGSAFPTIPLSRLFDNAMLRARRLYQLAYDTYQEFEEA 60
Query: 61 YIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLR 120
YI K+QKYSFL + QTS CFS+SIPTPSN +TQQKSNLELLRISLLLI+SWLEPV+ LR
Sbjct: 61 YILKEQKYSFLQNPQTSLCFSESIPTPSNRVKTQQKSNLELLRISLLLIQSWLEPVQLLR 120
Query: 121 SMFANNLVYDTSDSDDYHLLKDLEEGIQTLMGRLEDGSRRTGQILKQTYSKFDTNSHNHD 180
S+FAN+LVY SDS+ Y LKDLEEGIQTLM RLEDGS RTGQI Q+YSKFDT SHN D
Sbjct: 121 SVFANSLVYGASDSNVYRHLKDLEEGIQTLMWRLEDGSPRTGQIFNQSYSKFDTKSHNDD 180
Query: 181 ALLKNYGLLYCFRKDMDKVETFLRMVQCRSVEGSCGF 217
ALLKNYGLLYCFRKDMDKVETFLR+VQCRSVEGSCGF
Sbjct: 181 ALLKNYGLLYCFRKDMDKVETFLRIVQCRSVEGSCGF 217
>gi|12545381 chorionic somatomammotropin hormone-like 1 isoform 2
precursor [Homo sapiens]
Length = 199
Score = 343 bits (881), Expect = 5e-95
Identities = 180/217 (82%), Positives = 183/217 (84%), Gaps = 18/217 (8%)
Query: 1 MAPGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEET 60
MA GSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLF AMLQAHRAHQLAIDTYQEF +
Sbjct: 1 MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFKEAMLQAHRAHQLAIDTYQEFISS 60
Query: 61 YIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLR 120
+ DSIPT SNMEETQQKSNLELL ISLLLIES LEPVRFLR
Sbjct: 61 W------------------GMDSIPTSSNMEETQQKSNLELLHISLLLIESRLEPVRFLR 102
Query: 121 SMFANNLVYDTSDSDDYHLLKDLEEGIQTLMGRLEDGSRRTGQILKQTYSKFDTNSHNHD 180
S F NNLVYDTSDSDDYHLLKDLEEGIQ LMGRLEDGS TGQ LKQTYSKFDTNSHNHD
Sbjct: 103 STFTNNLVYDTSDSDDYHLLKDLEEGIQMLMGRLEDGSHLTGQTLKQTYSKFDTNSHNHD 162
Query: 181 ALLKNYGLLYCFRKDMDKVETFLRMVQCRSVEGSCGF 217
ALLKNYGLL+CFRKDMDKVETFLRMVQCRSVEGSCGF
Sbjct: 163 ALLKNYGLLHCFRKDMDKVETFLRMVQCRSVEGSCGF 199
>gi|13027814 growth hormone 1 isoform 2 [Homo sapiens]
Length = 202
Score = 339 bits (870), Expect = 9e-94
Identities = 173/217 (79%), Positives = 184/217 (84%), Gaps = 15/217 (6%)
Query: 1 MAPGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEET 60
MA GSRTSLLLAF LLCLPWLQE A T+PLSRLFD+AML+AHR HQLA DTYQEF
Sbjct: 1 MATGSRTSLLLAFGLLCLPWLQEGSAFPTIPLSRLFDNAMLRAHRLHQLAFDTYQEF--- 57
Query: 61 YIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLR 120
+ QTS CFS+SIPTPSN EETQQKSNLELLRISLLLI+SWLEPV+FLR
Sbjct: 58 ------------NPQTSLCFSESIPTPSNREETQQKSNLELLRISLLLIQSWLEPVQFLR 105
Query: 121 SMFANNLVYDTSDSDDYHLLKDLEEGIQTLMGRLEDGSRRTGQILKQTYSKFDTNSHNHD 180
S+FAN+LVY SDS+ Y LLKDLEEGIQTLMGRLEDGS RTGQI KQTYSKFDTNSHN D
Sbjct: 106 SVFANSLVYGASDSNVYDLLKDLEEGIQTLMGRLEDGSPRTGQIFKQTYSKFDTNSHNDD 165
Query: 181 ALLKNYGLLYCFRKDMDKVETFLRMVQCRSVEGSCGF 217
ALLKNYGLLYCFRKDMDKVETFLR+VQCRSVEGSCGF
Sbjct: 166 ALLKNYGLLYCFRKDMDKVETFLRIVQCRSVEGSCGF 202
>gi|13027822 growth hormone 2 isoform 4 [Homo sapiens]
Length = 202
Score = 313 bits (801), Expect = 9e-86
Identities = 162/217 (74%), Positives = 176/217 (81%), Gaps = 15/217 (6%)
Query: 1 MAPGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEET 60
MA GSRTSLLLAF LLCL WLQE A T+PLSRLFD+AML+A R +QLA DTYQEF
Sbjct: 1 MAAGSRTSLLLAFGLLCLSWLQEGSAFPTIPLSRLFDNAMLRARRLYQLAYDTYQEF--- 57
Query: 61 YIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLR 120
+ QTS CFS+SIPTPSN +TQQKSNLELLRISLLLI+SWLEPV+ LR
Sbjct: 58 ------------NPQTSLCFSESIPTPSNRVKTQQKSNLELLRISLLLIQSWLEPVQLLR 105
Query: 121 SMFANNLVYDTSDSDDYHLLKDLEEGIQTLMGRLEDGSRRTGQILKQTYSKFDTNSHNHD 180
S+FAN+LVY SDS+ Y LKDLEEGIQTLM RLEDGS RTGQI Q+YSKFDT SHN D
Sbjct: 106 SVFANSLVYGASDSNVYRHLKDLEEGIQTLMWRLEDGSPRTGQIFNQSYSKFDTKSHNDD 165
Query: 181 ALLKNYGLLYCFRKDMDKVETFLRMVQCRSVEGSCGF 217
ALLKNYGLLYCFRKDMDKVETFLR+VQCRSVEGSCGF
Sbjct: 166 ALLKNYGLLYCFRKDMDKVETFLRIVQCRSVEGSCGF 202
>gi|12408685 chorionic somatomammotropin hormone 1 isoform 2 [Homo
sapiens]
Length = 256
Score = 306 bits (785), Expect = 7e-84
Identities = 152/152 (100%), Positives = 152/152 (100%)
Query: 1 MAPGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEET 60
MAPGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEET
Sbjct: 1 MAPGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEET 60
Query: 61 YIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLR 120
YIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLR
Sbjct: 61 YIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLR 120
Query: 121 SMFANNLVYDTSDSDDYHLLKDLEEGIQTLMG 152
SMFANNLVYDTSDSDDYHLLKDLEEGIQTLMG
Sbjct: 121 SMFANNLVYDTSDSDDYHLLKDLEEGIQTLMG 152
>gi|12408692 chorionic somatomammotropin hormone 2 isoform 2 [Homo
sapiens]
Length = 167
Score = 303 bits (777), Expect = 6e-83
Identities = 151/152 (99%), Positives = 151/152 (99%)
Query: 1 MAPGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEET 60
MA GSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEET
Sbjct: 1 MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEET 60
Query: 61 YIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLR 120
YIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLR
Sbjct: 61 YIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLR 120
Query: 121 SMFANNLVYDTSDSDDYHLLKDLEEGIQTLMG 152
SMFANNLVYDTSDSDDYHLLKDLEEGIQTLMG
Sbjct: 121 SMFANNLVYDTSDSDDYHLLKDLEEGIQTLMG 152
>gi|13027816 growth hormone 1 isoform 3 [Homo sapiens]
Length = 177
Score = 289 bits (740), Expect = 1e-78
Identities = 153/217 (70%), Positives = 162/217 (74%), Gaps = 40/217 (18%)
Query: 1 MAPGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEET 60
MA GSRTSLLLAF LLCLPWLQE A T+PLSRLFD+AML+AHR HQLA DTYQEF
Sbjct: 1 MATGSRTSLLLAFGLLCLPWLQEGSAFPTIPLSRLFDNAMLRAHRLHQLAFDTYQEF--- 57
Query: 61 YIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLR 120
NLELLRISLLLI+SWLEPV+FLR
Sbjct: 58 -------------------------------------NLELLRISLLLIQSWLEPVQFLR 80
Query: 121 SMFANNLVYDTSDSDDYHLLKDLEEGIQTLMGRLEDGSRRTGQILKQTYSKFDTNSHNHD 180
S+FAN+LVY SDS+ Y LLKDLEEGIQTLMGRLEDGS RTGQI KQTYSKFDTNSHN D
Sbjct: 81 SVFANSLVYGASDSNVYDLLKDLEEGIQTLMGRLEDGSPRTGQIFKQTYSKFDTNSHNDD 140
Query: 181 ALLKNYGLLYCFRKDMDKVETFLRMVQCRSVEGSCGF 217
ALLKNYGLLYCFRKDMDKVETFLR+VQCRSVEGSCGF
Sbjct: 141 ALLKNYGLLYCFRKDMDKVETFLRIVQCRSVEGSCGF 177
>gi|12545378 chorionic somatomammotropin hormone-like 1 isoform 4
[Homo sapiens]
Length = 139
Score = 253 bits (645), Expect = 1e-67
Identities = 126/137 (91%), Positives = 128/137 (93%)
Query: 81 SDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLRSMFANNLVYDTSDSDDYHLL 140
+DSIPT SNMEETQQKSNLELL ISLLLIES LEPVRFLRS F NNLVYDTSDSDDYHLL
Sbjct: 3 ADSIPTSSNMEETQQKSNLELLHISLLLIESRLEPVRFLRSTFTNNLVYDTSDSDDYHLL 62
Query: 141 KDLEEGIQTLMGRLEDGSRRTGQILKQTYSKFDTNSHNHDALLKNYGLLYCFRKDMDKVE 200
KDLEEGIQ LMGRLEDGS TGQ LKQTYSKFDTNSHNHDALLKNYGLL+CFRKDMDKVE
Sbjct: 63 KDLEEGIQMLMGRLEDGSHLTGQTLKQTYSKFDTNSHNHDALLKNYGLLHCFRKDMDKVE 122
Query: 201 TFLRMVQCRSVEGSCGF 217
TFLRMVQCRSVEGSCGF
Sbjct: 123 TFLRMVQCRSVEGSCGF 139
>gi|38201628 chorionic somatomammotropin hormone-like 1 isoform 3
[Homo sapiens]
Length = 128
Score = 239 bits (609), Expect = 2e-63
Identities = 119/128 (92%), Positives = 120/128 (93%)
Query: 90 MEETQQKSNLELLRISLLLIESWLEPVRFLRSMFANNLVYDTSDSDDYHLLKDLEEGIQT 149
MEETQQKSNLELL ISLLLIES LEPVRFLRS F NNLVYDTSDSDDYHLLKDLEEGIQ
Sbjct: 1 MEETQQKSNLELLHISLLLIESRLEPVRFLRSTFTNNLVYDTSDSDDYHLLKDLEEGIQM 60
Query: 150 LMGRLEDGSRRTGQILKQTYSKFDTNSHNHDALLKNYGLLYCFRKDMDKVETFLRMVQCR 209
LMGRLEDGS TGQ LKQTYSKFDTNSHNHDALLKNYGLL+CFRKDMDKVETFLRMVQCR
Sbjct: 61 LMGRLEDGSHLTGQTLKQTYSKFDTNSHNHDALLKNYGLLHCFRKDMDKVETFLRMVQCR 120
Query: 210 SVEGSCGF 217
SVEGSCGF
Sbjct: 121 SVEGSCGF 128
>gi|13027826 growth hormone 2 isoform 3 [Homo sapiens]
Length = 245
Score = 226 bits (577), Expect = 9e-60
Identities = 115/152 (75%), Positives = 129/152 (84%)
Query: 1 MAPGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEET 60
MA GSRTSLLLAF LLCL WLQE A T+PLSRLFD+AML+A R +QLA DTYQEFEE
Sbjct: 1 MAAGSRTSLLLAFGLLCLSWLQEGSAFPTIPLSRLFDNAMLRARRLYQLAYDTYQEFEEA 60
Query: 61 YIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLR 120
YI K+QKYSFL + QTS CFS+SIPTPSN +TQQKSNLELLRISLLLI+SWLEPV+ LR
Sbjct: 61 YILKEQKYSFLQNPQTSLCFSESIPTPSNRVKTQQKSNLELLRISLLLIQSWLEPVQLLR 120
Query: 121 SMFANNLVYDTSDSDDYHLLKDLEEGIQTLMG 152
S+FAN+LVY SDS+ Y LKDLEEGIQTL+G
Sbjct: 121 SVFANSLVYGASDSNVYRHLKDLEEGIQTLIG 152
>gi|13027824 growth hormone 2 isoform 2 [Homo sapiens]
Length = 256
Score = 226 bits (575), Expect = 1e-59
Identities = 115/151 (76%), Positives = 128/151 (84%)
Query: 1 MAPGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEET 60
MA GSRTSLLLAF LLCL WLQE A T+PLSRLFD+AML+A R +QLA DTYQEFEE
Sbjct: 1 MAAGSRTSLLLAFGLLCLSWLQEGSAFPTIPLSRLFDNAMLRARRLYQLAYDTYQEFEEA 60
Query: 61 YIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLR 120
YI K+QKYSFL + QTS CFS+SIPTPSN +TQQKSNLELLRISLLLI+SWLEPV+ LR
Sbjct: 61 YILKEQKYSFLQNPQTSLCFSESIPTPSNRVKTQQKSNLELLRISLLLIQSWLEPVQLLR 120
Query: 121 SMFANNLVYDTSDSDDYHLLKDLEEGIQTLM 151
S+FAN+LVY SDS+ Y LKDLEEGIQTLM
Sbjct: 121 SVFANSLVYGASDSNVYRHLKDLEEGIQTLM 151
>gi|239756908 PREDICTED: similar to chorionic somatomammotropin
hormone 2 [Homo sapiens]
Length = 96
Score = 201 bits (511), Expect = 4e-52
Identities = 96/96 (100%), Positives = 96/96 (100%)
Query: 122 MFANNLVYDTSDSDDYHLLKDLEEGIQTLMGRLEDGSRRTGQILKQTYSKFDTNSHNHDA 181
MFANNLVYDTSDSDDYHLLKDLEEGIQTLMGRLEDGSRRTGQILKQTYSKFDTNSHNHDA
Sbjct: 1 MFANNLVYDTSDSDDYHLLKDLEEGIQTLMGRLEDGSRRTGQILKQTYSKFDTNSHNHDA 60
Query: 182 LLKNYGLLYCFRKDMDKVETFLRMVQCRSVEGSCGF 217
LLKNYGLLYCFRKDMDKVETFLRMVQCRSVEGSCGF
Sbjct: 61 LLKNYGLLYCFRKDMDKVETFLRMVQCRSVEGSCGF 96
>gi|12408687 chorionic somatomammotropin hormone 1 isoform 3 [Homo
sapiens]
Length = 122
Score = 139 bits (349), Expect = 2e-33
Identities = 65/65 (100%), Positives = 65/65 (100%)
Query: 153 RLEDGSRRTGQILKQTYSKFDTNSHNHDALLKNYGLLYCFRKDMDKVETFLRMVQCRSVE 212
RLEDGSRRTGQILKQTYSKFDTNSHNHDALLKNYGLLYCFRKDMDKVETFLRMVQCRSVE
Sbjct: 58 RLEDGSRRTGQILKQTYSKFDTNSHNHDALLKNYGLLYCFRKDMDKVETFLRMVQCRSVE 117
Query: 213 GSCGF 217
GSCGF
Sbjct: 118 GSCGF 122
Score = 117 bits (293), Expect = 8e-27
Identities = 57/57 (100%), Positives = 57/57 (100%)
Query: 1 MAPGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEF 57
MAPGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEF
Sbjct: 1 MAPGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEF 57
>gi|12408694 chorionic somatomammotropin hormone 2 isoform 3 [Homo
sapiens]
Length = 122
Score = 139 bits (349), Expect = 2e-33
Identities = 65/65 (100%), Positives = 65/65 (100%)
Query: 153 RLEDGSRRTGQILKQTYSKFDTNSHNHDALLKNYGLLYCFRKDMDKVETFLRMVQCRSVE 212
RLEDGSRRTGQILKQTYSKFDTNSHNHDALLKNYGLLYCFRKDMDKVETFLRMVQCRSVE
Sbjct: 58 RLEDGSRRTGQILKQTYSKFDTNSHNHDALLKNYGLLYCFRKDMDKVETFLRMVQCRSVE 117
Query: 213 GSCGF 217
GSCGF
Sbjct: 118 GSCGF 122
Score = 114 bits (285), Expect = 6e-26
Identities = 56/57 (98%), Positives = 56/57 (98%)
Query: 1 MAPGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEF 57
MA GSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEF
Sbjct: 1 MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEF 57
>gi|13027818 growth hormone 1 isoform 4 [Homo sapiens]
Length = 122
Score = 129 bits (325), Expect = 1e-30
Identities = 61/65 (93%), Positives = 62/65 (95%)
Query: 153 RLEDGSRRTGQILKQTYSKFDTNSHNHDALLKNYGLLYCFRKDMDKVETFLRMVQCRSVE 212
RLEDGS RTGQI KQTYSKFDTNSHN DALLKNYGLLYCFRKDMDKVETFLR+VQCRSVE
Sbjct: 58 RLEDGSPRTGQIFKQTYSKFDTNSHNDDALLKNYGLLYCFRKDMDKVETFLRIVQCRSVE 117
Query: 213 GSCGF 217
GSCGF
Sbjct: 118 GSCGF 122
Score = 96.7 bits (239), Expect = 1e-20
Identities = 46/57 (80%), Positives = 49/57 (85%)
Query: 1 MAPGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEF 57
MA GSRTSLLLAF LLCLPWLQE A T+PLSRLFD+AML+AHR HQLA DTYQEF
Sbjct: 1 MATGSRTSLLLAFGLLCLPWLQEGSAFPTIPLSRLFDNAMLRAHRLHQLAFDTYQEF 57
>gi|4506105 prolactin precursor [Homo sapiens]
Length = 227
Score = 69.3 bits (168), Expect = 2e-12
Identities = 54/220 (24%), Positives = 100/220 (45%), Gaps = 13/220 (5%)
Query: 4 GSRTSLLLAFALLC-----LPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFE 58
GS LL++ LLC LP A V L LFD A++ +H H L+ + + EF+
Sbjct: 10 GSLLLLLVSNLLLCQSVAPLPICPGGAARCQVTLRDLFDRAVVLSHYIHNLSSEMFSEFD 69
Query: 59 ETYIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRF 118
+ Y F+ + S C + S+ TP + E+ QQ + + L + + ++ SW EP+
Sbjct: 70 KRYT---HGRGFITKAINS-CHTSSLATPEDKEQAQQMNQKDFLSLIVSILRSWNEPLYH 125
Query: 119 L----RSMFANNLVYDTSDSDDYHLLKDLEEGIQTLMGRLEDGSRRTGQILKQTYSKFDT 174
L R M + + K L EG++ ++ ++ ++ +
Sbjct: 126 LVTEVRGMQEAPEAILSKAVEIEEQTKRLLEGMELIVSQVHPETKENEIYPVWSGLPSLQ 185
Query: 175 NSHNHDALLKNYGLLYCFRKDMDKVETFLRMVQCRSVEGS 214
+ L Y LL+C R+D K++ +L++++CR + +
Sbjct: 186 MADEESRLSAYYNLLHCLRRDSHKIDNYLKLLKCRIIHNN 225
>gi|34452709 bromodomain containing 8 isoform 3 [Homo sapiens]
Length = 757
Score = 30.8 bits (68), Expect = 0.92
Identities = 14/40 (35%), Positives = 24/40 (60%)
Query: 108 LIESWLEPVRFLRSMFANNLVYDTSDSDDYHLLKDLEEGI 147
LI S E R + MF N ++Y++SD D YH+ +++ +
Sbjct: 659 LIRSTAEFQRDIMLMFQNAVMYNSSDHDVYHMAVEMQRDV 698
>gi|34452707 bromodomain containing 8 isoform 2 [Homo sapiens]
Length = 1235
Score = 30.8 bits (68), Expect = 0.92
Identities = 14/40 (35%), Positives = 24/40 (60%)
Query: 108 LIESWLEPVRFLRSMFANNLVYDTSDSDDYHLLKDLEEGI 147
LI S E R + MF N ++Y++SD D YH+ +++ +
Sbjct: 765 LIRSTAEFQRDIMLMFQNAVMYNSSDHDVYHMAVEMQRDV 804
>gi|34452705 bromodomain containing 8 isoform 1 [Homo sapiens]
Length = 951
Score = 30.8 bits (68), Expect = 0.92
Identities = 14/40 (35%), Positives = 24/40 (60%)
Query: 108 LIESWLEPVRFLRSMFANNLVYDTSDSDDYHLLKDLEEGI 147
LI S E R + MF N ++Y++SD D YH+ +++ +
Sbjct: 838 LIRSTAEFQRDIMLMFQNAVMYNSSDHDVYHMAVEMQRDV 877
>gi|126032338 ryanodine receptor 3 [Homo sapiens]
Length = 4870
Score = 30.4 bits (67), Expect = 1.2
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 112 WLEPVRFLRSMFANNLVYDTSDSDDYHLLKDLEEGIQ---TLMGRLEDGSRRTGQILKQT 168
W V FL +FAN + + DS LLK+L + +Q ++ L +G+ G I KQ
Sbjct: 3837 WDAVVGFLH-VFANMQMKLSQDSSQIELLKELLDLLQDMVVMLLSLLEGNVVNGTIGKQM 3895
Query: 169 YSKFDTNSHNHDALLKNYGLLYCFRKDMDKVETF 202
+S N + +LK + ++ KD+ +TF
Sbjct: 3896 VDTLVESSTNVEMILKFFD-MFLKLKDLTSSDTF 3928
>gi|112799847 cardiac muscle ryanodine receptor [Homo sapiens]
Length = 4967
Score = 30.0 bits (66), Expect = 1.6
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 112 WLEPVRFLRSMFANNLVYDTSDSDDYHLLK---DLEEGIQTLMGRLEDGSRRTGQILKQT 168
W V FL +FA+ + + DS LLK DL++ + ++ + +G+ G I KQ
Sbjct: 3941 WDAVVGFLH-VFAHMQMKLSQDSSQIELLKELMDLQKDMVVMLLSMLEGNVVNGTIGKQM 3999
Query: 169 YSKFDTNSHNHDALLKNYGLLYCFRKDMDKVETF 202
+S+N + +LK + ++ KD+ +TF
Sbjct: 4000 VDMLVESSNNVEMILKFFD-MFLKLKDLTSSDTF 4032
>gi|10863937 tumor necrosis factor, alpha-induced protein 1 [Homo
sapiens]
Length = 316
Score = 30.0 bits (66), Expect = 1.6
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 13/76 (17%)
Query: 69 SFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLRSMFANNLV 128
S L D + S+ +IP ++++E ++ LIES +PV L +NN
Sbjct: 122 SALQDKKDSYQPVCNIPIITSLKEEER------------LIESSTKPVVKLLYNRSNNKY 169
Query: 129 YDTSDSDDYHLLKDLE 144
TS+SDD HLLK++E
Sbjct: 170 SYTSNSDD-HLLKNIE 184
>gi|5032281 dystrophin Dp427c isoform [Homo sapiens]
Length = 3677
Score = 29.6 bits (65), Expect = 2.1
Identities = 37/161 (22%), Positives = 61/161 (37%), Gaps = 22/161 (13%)
Query: 21 LQEAGAVQTVPLSRLFDHAML--QAHRAHQLAIDTYQEFEETYIPKDQKYSFLHDSQTSF 78
+QE + P +H L Q H + Q+ + Q +E T PK + S+ +
Sbjct: 240 IQEVEMLPRPPKVTKEEHFQLHHQMHYSQQITVSLAQGYERTSSPKPRFKSYAYTQAAYV 299
Query: 79 CFSDSIPTP---SNMEETQQKS----------NLELLRISLLLIESWLEPVRFLRSMFAN 125
SD +P ++E + KS NL+ + +L + SWL +
Sbjct: 300 TTSDPTRSPFPSQHLEAPEDKSFGSSLMESEVNLDRYQTALEEVLSWLLSAE-------D 352
Query: 126 NLVYDTSDSDDYHLLKDLEEGIQTLMGRLEDGSRRTGQILK 166
L S+D ++KD + M L R G IL+
Sbjct: 353 TLQAQGEISNDVEVVKDQFHTHEGYMMDLTAHQGRVGNILQ 393
>gi|5032315 dystrophin Dp427p2 isoform [Homo sapiens]
Length = 3562
Score = 29.6 bits (65), Expect = 2.1
Identities = 37/161 (22%), Positives = 61/161 (37%), Gaps = 22/161 (13%)
Query: 21 LQEAGAVQTVPLSRLFDHAML--QAHRAHQLAIDTYQEFEETYIPKDQKYSFLHDSQTSF 78
+QE + P +H L Q H + Q+ + Q +E T PK + S+ +
Sbjct: 125 IQEVEMLPRPPKVTKEEHFQLHHQMHYSQQITVSLAQGYERTSSPKPRFKSYAYTQAAYV 184
Query: 79 CFSDSIPTP---SNMEETQQKS----------NLELLRISLLLIESWLEPVRFLRSMFAN 125
SD +P ++E + KS NL+ + +L + SWL +
Sbjct: 185 TTSDPTRSPFPSQHLEAPEDKSFGSSLMESEVNLDRYQTALEEVLSWLLSAE-------D 237
Query: 126 NLVYDTSDSDDYHLLKDLEEGIQTLMGRLEDGSRRTGQILK 166
L S+D ++KD + M L R G IL+
Sbjct: 238 TLQAQGEISNDVEVVKDQFHTHEGYMMDLTAHQGRVGNILQ 278
>gi|5032287 dystrophin Dp427p1 isoform [Homo sapiens]
Length = 3681
Score = 29.6 bits (65), Expect = 2.1
Identities = 37/161 (22%), Positives = 61/161 (37%), Gaps = 22/161 (13%)
Query: 21 LQEAGAVQTVPLSRLFDHAML--QAHRAHQLAIDTYQEFEETYIPKDQKYSFLHDSQTSF 78
+QE + P +H L Q H + Q+ + Q +E T PK + S+ +
Sbjct: 244 IQEVEMLPRPPKVTKEEHFQLHHQMHYSQQITVSLAQGYERTSSPKPRFKSYAYTQAAYV 303
Query: 79 CFSDSIPTP---SNMEETQQKS----------NLELLRISLLLIESWLEPVRFLRSMFAN 125
SD +P ++E + KS NL+ + +L + SWL +
Sbjct: 304 TTSDPTRSPFPSQHLEAPEDKSFGSSLMESEVNLDRYQTALEEVLSWLLSAE-------D 356
Query: 126 NLVYDTSDSDDYHLLKDLEEGIQTLMGRLEDGSRRTGQILK 166
L S+D ++KD + M L R G IL+
Sbjct: 357 TLQAQGEISNDVEVVKDQFHTHEGYMMDLTAHQGRVGNILQ 397
>gi|5032285 dystrophin Dp427l isoform [Homo sapiens]
Length = 3562
Score = 29.6 bits (65), Expect = 2.1
Identities = 37/161 (22%), Positives = 61/161 (37%), Gaps = 22/161 (13%)
Query: 21 LQEAGAVQTVPLSRLFDHAML--QAHRAHQLAIDTYQEFEETYIPKDQKYSFLHDSQTSF 78
+QE + P +H L Q H + Q+ + Q +E T PK + S+ +
Sbjct: 125 IQEVEMLPRPPKVTKEEHFQLHHQMHYSQQITVSLAQGYERTSSPKPRFKSYAYTQAAYV 184
Query: 79 CFSDSIPTP---SNMEETQQKS----------NLELLRISLLLIESWLEPVRFLRSMFAN 125
SD +P ++E + KS NL+ + +L + SWL +
Sbjct: 185 TTSDPTRSPFPSQHLEAPEDKSFGSSLMESEVNLDRYQTALEEVLSWLLSAE-------D 237
Query: 126 NLVYDTSDSDDYHLLKDLEEGIQTLMGRLEDGSRRTGQILK 166
L S+D ++KD + M L R G IL+
Sbjct: 238 TLQAQGEISNDVEVVKDQFHTHEGYMMDLTAHQGRVGNILQ 278
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.135 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,777,150
Number of Sequences: 37866
Number of extensions: 305468
Number of successful extensions: 862
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 824
Number of HSP's gapped (non-prelim): 44
length of query: 217
length of database: 18,247,518
effective HSP length: 98
effective length of query: 119
effective length of database: 14,536,650
effective search space: 1729861350
effective search space used: 1729861350
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.