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Search of human proteins with 42544117
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|42544117 rTS beta protein isoform rTS gamma [Homo sapiens]
(450 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|42544117 rTS beta protein isoform rTS gamma [Homo sapiens] 914 0.0
gi|42544119 enolase superfamily 1 isoform rTS beta [Homo sapiens] 827 0.0
gi|186972148 enolase superfamily 1 isoform rTSalpha [Homo sapiens] 667 0.0
gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens] 33 0.69
gi|120587019 zinc finger protein 318 [Homo sapiens] 33 0.69
gi|226246554 hypothetical protein LOC643677 [Homo sapiens] 30 5.8
gi|239756039 PREDICTED: hypothetical protein LOC643677 [Homo sap... 30 5.8
gi|239750569 PREDICTED: hypothetical protein LOC643677 [Homo sap... 30 5.8
gi|239744870 PREDICTED: hypothetical protein LOC643677 [Homo sap... 30 5.8
gi|169183850 PREDICTED: similar to hCG1809973 [Homo sapiens] 29 9.9
gi|169179690 PREDICTED: similar to ATP synthase, H+ transporting... 29 9.9
gi|169179753 PREDICTED: similar to hCG1809973 [Homo sapiens] 29 9.9
gi|239743684 PREDICTED: hypothetical protein LOC138864 [Homo sap... 29 9.9
gi|54607089 semaphorin 3B isoform 2 precursor [Homo sapiens] 29 9.9
gi|4759092 semaphorin 3B isoform 1 precursor [Homo sapiens] 29 9.9
gi|47419911 transcriptional intermediary factor 1 alpha isoform ... 29 9.9
gi|47419909 transcriptional intermediary factor 1 alpha isoform ... 29 9.9
gi|14249568 hypothetical protein LOC84933 [Homo sapiens] 29 9.9
>gi|42544117 rTS beta protein isoform rTS gamma [Homo sapiens]
Length = 450
Score = 914 bits (2363), Expect = 0.0
Identities = 450/450 (100%), Positives = 450/450 (100%)
Query: 1 MVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMHTDPDYSAAYV 60
MVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMHTDPDYSAAYV
Sbjct: 1 MVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMHTDPDYSAAYV 60
Query: 61 VIETDAEDGIKGCGITFTLGKGTEVVVCAVNALAHHVLNKDLKDIVGDFRGFYRQLTSDG 120
VIETDAEDGIKGCGITFTLGKGTEVVVCAVNALAHHVLNKDLKDIVGDFRGFYRQLTSDG
Sbjct: 61 VIETDAEDGIKGCGITFTLGKGTEVVVCAVNALAHHVLNKDLKDIVGDFRGFYRQLTSDG 120
Query: 121 QLRWIGPEKGVVHLATAAVLNAVWDLWAKQEGKPVWKLLVDMDPRMLVSCIDFRYITDVL 180
QLRWIGPEKGVVHLATAAVLNAVWDLWAKQEGKPVWKLLVDMDPRMLVSCIDFRYITDVL
Sbjct: 121 QLRWIGPEKGVVHLATAAVLNAVWDLWAKQEGKPVWKLLVDMDPRMLVSCIDFRYITDVL 180
Query: 181 TEEDALEILQKGQIGKKEREKQMLAQGYPAYTTSCAWLGYSDDTLKQLCAQALKDGWTRF 240
TEEDALEILQKGQIGKKEREKQMLAQGYPAYTTSCAWLGYSDDTLKQLCAQALKDGWTRF
Sbjct: 181 TEEDALEILQKGQIGKKEREKQMLAQGYPAYTTSCAWLGYSDDTLKQLCAQALKDGWTRF 240
Query: 241 KVKVGADLQDDMRRCQIIRDMIGPEKTLMMDANQRWDVPEAVEWMSKLAKFKPLWIEEPT 300
KVKVGADLQDDMRRCQIIRDMIGPEKTLMMDANQRWDVPEAVEWMSKLAKFKPLWIEEPT
Sbjct: 241 KVKVGADLQDDMRRCQIIRDMIGPEKTLMMDANQRWDVPEAVEWMSKLAKFKPLWIEEPT 300
Query: 301 SPDDILGHATISKCHNRVIFKQLLQAKALQFLQIDSCRLGSVNENLSVLLMAKKFEIPVC 360
SPDDILGHATISKCHNRVIFKQLLQAKALQFLQIDSCRLGSVNENLSVLLMAKKFEIPVC
Sbjct: 301 SPDDILGHATISKCHNRVIFKQLLQAKALQFLQIDSCRLGSVNENLSVLLMAKKFEIPVC 360
Query: 361 PHAGGVGLCELVQHLIIFDYISVSASLENRVCEYVDHLHEHFKYPVMIQRASYMPPKDPG 420
PHAGGVGLCELVQHLIIFDYISVSASLENRVCEYVDHLHEHFKYPVMIQRASYMPPKDPG
Sbjct: 361 PHAGGVGLCELVQHLIIFDYISVSASLENRVCEYVDHLHEHFKYPVMIQRASYMPPKDPG 420
Query: 421 YSTEMKEESVKKHQYPDGEVWKKLLPAQEN 450
YSTEMKEESVKKHQYPDGEVWKKLLPAQEN
Sbjct: 421 YSTEMKEESVKKHQYPDGEVWKKLLPAQEN 450
>gi|42544119 enolase superfamily 1 isoform rTS beta [Homo sapiens]
Length = 443
Score = 827 bits (2136), Expect = 0.0
Identities = 405/419 (96%), Positives = 405/419 (96%), Gaps = 14/419 (3%)
Query: 46 ADAMHTDPDYSAAYVVIETDAEDGIKGCGITFTLGKGTEVVVCAVNALAHHVLNKDLKDI 105
ADAMHTDPDYSAAYVVIETDAEDGIKGCGITFTLGKGTEVVVCAVNALAHHVLNKDLKDI
Sbjct: 25 ADAMHTDPDYSAAYVVIETDAEDGIKGCGITFTLGKGTEVVVCAVNALAHHVLNKDLKDI 84
Query: 106 VGDFRGFYRQLTSDGQLRWIGPEKGVVHLATAAVLNAVWDLWAKQEGKPVWKLLVDMDPR 165
VGDFRGFYRQLTSDGQLRWIGPEKGVVHLATAAVLNAVWDLWAKQEGKPVWKLLVDMDPR
Sbjct: 85 VGDFRGFYRQLTSDGQLRWIGPEKGVVHLATAAVLNAVWDLWAKQEGKPVWKLLVDMDPR 144
Query: 166 MLVSCIDFRYITDVLTEEDALEILQKGQIGKKEREKQMLAQGYPAYTTSCAWLGYSDDTL 225
MLVSCIDFRYITDVLTEEDALEILQKGQIGKKEREKQMLAQGYPAYTTSCAWLGYSDDTL
Sbjct: 145 MLVSCIDFRYITDVLTEEDALEILQKGQIGKKEREKQMLAQGYPAYTTSCAWLGYSDDTL 204
Query: 226 KQLCAQALKDGWTRFKVKVGADLQDDMRRCQIIRDMIGPEKTLMMDANQRWDVPEAVEWM 285
KQLCAQALKDGWTRFKVKVGADLQDDMRRCQIIRDMIGPEKTLMMDANQRWDVPEAVEWM
Sbjct: 205 KQLCAQALKDGWTRFKVKVGADLQDDMRRCQIIRDMIGPEKTLMMDANQRWDVPEAVEWM 264
Query: 286 SKLAKFKPLWIEEPTSPDDILGHATISK--------------CHNRVIFKQLLQAKALQF 331
SKLAKFKPLWIEEPTSPDDILGHATISK CHNRVIFKQLLQAKALQF
Sbjct: 265 SKLAKFKPLWIEEPTSPDDILGHATISKALVPLGIGIATGEQCHNRVIFKQLLQAKALQF 324
Query: 332 LQIDSCRLGSVNENLSVLLMAKKFEIPVCPHAGGVGLCELVQHLIIFDYISVSASLENRV 391
LQIDSCRLGSVNENLSVLLMAKKFEIPVCPHAGGVGLCELVQHLIIFDYISVSASLENRV
Sbjct: 325 LQIDSCRLGSVNENLSVLLMAKKFEIPVCPHAGGVGLCELVQHLIIFDYISVSASLENRV 384
Query: 392 CEYVDHLHEHFKYPVMIQRASYMPPKDPGYSTEMKEESVKKHQYPDGEVWKKLLPAQEN 450
CEYVDHLHEHFKYPVMIQRASYMPPKDPGYSTEMKEESVKKHQYPDGEVWKKLLPAQEN
Sbjct: 385 CEYVDHLHEHFKYPVMIQRASYMPPKDPGYSTEMKEESVKKHQYPDGEVWKKLLPAQEN 443
>gi|186972148 enolase superfamily 1 isoform rTSalpha [Homo sapiens]
Length = 361
Score = 667 bits (1720), Expect = 0.0
Identities = 327/343 (95%), Positives = 328/343 (95%), Gaps = 14/343 (4%)
Query: 122 LRWIGPEKGVVHLATAAVLNAVWDLWAKQEGKPVWKLLVDMDPRMLVSCIDFRYITDVLT 181
L+ IGPEKGVVHLATAAVLNAVWDLWAKQEGKPVWKLLVDMDPRMLVSCIDFRYITDVLT
Sbjct: 19 LKLIGPEKGVVHLATAAVLNAVWDLWAKQEGKPVWKLLVDMDPRMLVSCIDFRYITDVLT 78
Query: 182 EEDALEILQKGQIGKKEREKQMLAQGYPAYTTSCAWLGYSDDTLKQLCAQALKDGWTRFK 241
EEDALEILQKGQIGKKEREKQMLAQGYPAYTTSCAWLGYSDDTLKQLCAQALKDGWTRFK
Sbjct: 79 EEDALEILQKGQIGKKEREKQMLAQGYPAYTTSCAWLGYSDDTLKQLCAQALKDGWTRFK 138
Query: 242 VKVGADLQDDMRRCQIIRDMIGPEKTLMMDANQRWDVPEAVEWMSKLAKFKPLWIEEPTS 301
VKVGADLQDDMRRCQIIRDMIGPEKTLMMDANQRWDVPEAVEWMSKLAKFKPLWIEEPTS
Sbjct: 139 VKVGADLQDDMRRCQIIRDMIGPEKTLMMDANQRWDVPEAVEWMSKLAKFKPLWIEEPTS 198
Query: 302 PDDILGHATISK--------------CHNRVIFKQLLQAKALQFLQIDSCRLGSVNENLS 347
PDDILGHATISK CHNRVIFKQLLQAKALQFLQIDSCRLGSVNENLS
Sbjct: 199 PDDILGHATISKALVPLGIGIATGEQCHNRVIFKQLLQAKALQFLQIDSCRLGSVNENLS 258
Query: 348 VLLMAKKFEIPVCPHAGGVGLCELVQHLIIFDYISVSASLENRVCEYVDHLHEHFKYPVM 407
VLLMAKKFEIPVCPHAGGVGLCELVQHLIIFDYISVSASLENRVCEYVDHLHEHFKYPVM
Sbjct: 259 VLLMAKKFEIPVCPHAGGVGLCELVQHLIIFDYISVSASLENRVCEYVDHLHEHFKYPVM 318
Query: 408 IQRASYMPPKDPGYSTEMKEESVKKHQYPDGEVWKKLLPAQEN 450
IQRASYMPPKDPGYSTEMKEESVKKHQYPDGEVWKKLLPAQEN
Sbjct: 319 IQRASYMPPKDPGYSTEMKEESVKKHQYPDGEVWKKLLPAQEN 361
>gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens]
Length = 1301
Score = 32.7 bits (73), Expect = 0.69
Identities = 18/66 (27%), Positives = 40/66 (60%)
Query: 3 SADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMHTDPDYSAAYVVI 62
S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ ++ ++
Sbjct: 1093 SSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSSDSSESSD 1152
Query: 63 ETDAED 68
+D+ D
Sbjct: 1153 SSDSSD 1158
Score = 32.0 bits (71), Expect = 1.2
Identities = 18/66 (27%), Positives = 39/66 (59%)
Query: 3 SADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMHTDPDYSAAYVVI 62
S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ + ++
Sbjct: 1144 SSDSSESSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSD 1203
Query: 63 ETDAED 68
+D+ D
Sbjct: 1204 SSDSSD 1209
Score = 32.0 bits (71), Expect = 1.2
Identities = 18/66 (27%), Positives = 39/66 (59%)
Query: 3 SADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMHTDPDYSAAYVVI 62
S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ + ++
Sbjct: 1192 SSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSNESSDSSDSSDSSDSSNSSD 1251
Query: 63 ETDAED 68
+D+ D
Sbjct: 1252 SSDSSD 1257
Score = 31.6 bits (70), Expect = 1.5
Identities = 18/66 (27%), Positives = 39/66 (59%)
Query: 3 SADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMHTDPDYSAAYVVI 62
S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ + ++
Sbjct: 1033 SSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSESSDSSDSSN 1092
Query: 63 ETDAED 68
+D+ D
Sbjct: 1093 SSDSSD 1098
Score = 31.6 bits (70), Expect = 1.5
Identities = 18/66 (27%), Positives = 39/66 (59%)
Query: 3 SADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMHTDPDYSAAYVVI 62
S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ + ++
Sbjct: 1099 SSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSSDSSESSDSSDSSD 1158
Query: 63 ETDAED 68
+D+ D
Sbjct: 1159 SSDSSD 1164
Score = 31.6 bits (70), Expect = 1.5
Identities = 18/66 (27%), Positives = 39/66 (59%)
Query: 3 SADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMHTDPDYSAAYVVI 62
S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ + ++
Sbjct: 1150 SSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSD 1209
Query: 63 ETDAED 68
+D+ D
Sbjct: 1210 SSDSSD 1215
Score = 31.6 bits (70), Expect = 1.5
Identities = 18/66 (27%), Positives = 39/66 (59%)
Query: 3 SADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMHTDPDYSAAYVVI 62
S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ + ++
Sbjct: 1156 SSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSD 1215
Query: 63 ETDAED 68
+D+ D
Sbjct: 1216 SSDSSD 1221
Score = 31.6 bits (70), Expect = 1.5
Identities = 18/66 (27%), Positives = 39/66 (59%)
Query: 3 SADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMHTDPDYSAAYVVI 62
S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ + ++
Sbjct: 1162 SSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSD 1221
Query: 63 ETDAED 68
+D+ D
Sbjct: 1222 SSDSSD 1227
Score = 31.6 bits (70), Expect = 1.5
Identities = 18/66 (27%), Positives = 39/66 (59%)
Query: 3 SADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMHTDPDYSAAYVVI 62
S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ + ++
Sbjct: 1180 SSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSNESSDSSD 1239
Query: 63 ETDAED 68
+D+ D
Sbjct: 1240 SSDSSD 1245
Score = 31.2 bits (69), Expect = 2.0
Identities = 16/49 (32%), Positives = 34/49 (69%)
Query: 3 SADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMHT 51
S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ ++
Sbjct: 734 SSDSSNSSDSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNS 782
Score = 31.2 bits (69), Expect = 2.0
Identities = 17/55 (30%), Positives = 36/55 (65%)
Query: 3 SADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMHTDPDYSA 57
S+D+ S+D+ S+D+ S+++ S+D+ S+D+ S+D+ S+D+ +D S+
Sbjct: 770 SSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSS 824
Score = 31.2 bits (69), Expect = 2.0
Identities = 18/66 (27%), Positives = 39/66 (59%)
Query: 3 SADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMHTDPDYSAAYVVI 62
S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ + ++
Sbjct: 1006 SSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSD 1065
Query: 63 ETDAED 68
+D+ D
Sbjct: 1066 SSDSSD 1071
Score = 31.2 bits (69), Expect = 2.0
Identities = 18/66 (27%), Positives = 39/66 (59%)
Query: 3 SADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMHTDPDYSAAYVVI 62
S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ + ++
Sbjct: 1174 SSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSNE 1233
Query: 63 ETDAED 68
+D+ D
Sbjct: 1234 SSDSSD 1239
Score = 30.8 bits (68), Expect = 2.6
Identities = 16/46 (34%), Positives = 32/46 (69%)
Query: 3 SADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADA 48
S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ S+D+
Sbjct: 740 SSDSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDS 785
Score = 30.8 bits (68), Expect = 2.6
Identities = 17/66 (25%), Positives = 41/66 (62%)
Query: 3 SADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMHTDPDYSAAYVVI 62
S+D+ S+D+ S+D+ S+D+ S+++ S+D+ S+D+ S+D+ ++ +++
Sbjct: 976 SSDSSNSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSNSSDSSNSSDSSNSSDSSD 1035
Query: 63 ETDAED 68
+D+ D
Sbjct: 1036 SSDSSD 1041
Score = 30.8 bits (68), Expect = 2.6
Identities = 17/66 (25%), Positives = 40/66 (60%)
Query: 3 SADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMHTDPDYSAAYVVI 62
S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ S+++ S+D+ ++ ++
Sbjct: 1045 SSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSESSDSSDSSNSSDSSDSSDSSD 1104
Query: 63 ETDAED 68
+D+ D
Sbjct: 1105 SSDSSD 1110
Score = 30.8 bits (68), Expect = 2.6
Identities = 16/46 (34%), Positives = 32/46 (69%)
Query: 3 SADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADA 48
S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ S+D+
Sbjct: 1087 SSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDS 1132
Score = 30.8 bits (68), Expect = 2.6
Identities = 17/66 (25%), Positives = 40/66 (60%)
Query: 3 SADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMHTDPDYSAAYVVI 62
S+D+ S+++ S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ ++ ++
Sbjct: 1132 SSDSSDSSNSSDSSDSSESSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSD 1191
Query: 63 ETDAED 68
+D+ D
Sbjct: 1192 SSDSSD 1197
Score = 30.4 bits (67), Expect = 3.4
Identities = 17/66 (25%), Positives = 41/66 (62%)
Query: 3 SADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMHTDPDYSAAYVVI 62
S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ S+++ S+D+ ++ +++
Sbjct: 752 SSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSD 811
Query: 63 ETDAED 68
+D+ D
Sbjct: 812 SSDSSD 817
Score = 30.4 bits (67), Expect = 3.4
Identities = 17/66 (25%), Positives = 40/66 (60%)
Query: 3 SADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMHTDPDYSAAYVVI 62
S+D+ S+D+ S+D+ S+++ S+D+ S+D+ S+D+ S+D+ ++ ++
Sbjct: 982 SSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSSDSSD 1041
Query: 63 ETDAED 68
+D+ D
Sbjct: 1042 SSDSSD 1047
Score = 30.4 bits (67), Expect = 3.4
Identities = 17/66 (25%), Positives = 39/66 (59%)
Query: 3 SADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMHTDPDYSAAYVVI 62
S+D+ S+D+ S+D+ S+++ S+D+ S+D+ S+D+ S+D+ + ++
Sbjct: 1036 SSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSESSDSSDSSNSSD 1095
Query: 63 ETDAED 68
+D+ D
Sbjct: 1096 SSDSSD 1101
Score = 30.4 bits (67), Expect = 3.4
Identities = 17/66 (25%), Positives = 40/66 (60%)
Query: 3 SADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMHTDPDYSAAYVVI 62
S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ S+++ + +++
Sbjct: 1039 SSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSESSDSSDSSNSSDSSD 1098
Query: 63 ETDAED 68
+D+ D
Sbjct: 1099 SSDSSD 1104
Score = 30.4 bits (67), Expect = 3.4
Identities = 17/66 (25%), Positives = 39/66 (59%)
Query: 3 SADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMHTDPDYSAAYVVI 62
S+D+ S+D+ S+D+ S+D+ S+++ S+D+ S+D+ S+D+ + ++
Sbjct: 1066 SSDSSDSSDSSDSSDSSESSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSD 1125
Query: 63 ETDAED 68
+D+ D
Sbjct: 1126 SSDSSD 1131
Score = 30.4 bits (67), Expect = 3.4
Identities = 17/66 (25%), Positives = 40/66 (60%)
Query: 3 SADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMHTDPDYSAAYVVI 62
S+D+ S+D+ S+++ S+D+ S+D+ S+D+ S+D+ S+D+ + +++
Sbjct: 1069 SSDSSDSSDSSDSSESSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSD 1128
Query: 63 ETDAED 68
+D+ D
Sbjct: 1129 SSDSSD 1134
Score = 30.4 bits (67), Expect = 3.4
Identities = 17/66 (25%), Positives = 39/66 (59%)
Query: 3 SADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMHTDPDYSAAYVVI 62
S+D+ S+D+ S+D+ S+D+ S+++ S+D+ S+D+ S+D+ + ++
Sbjct: 1123 SSDSSDSSDSSDSSDSSNSSDSSDSSESSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSD 1182
Query: 63 ETDAED 68
+D+ D
Sbjct: 1183 SSDSSD 1188
Score = 30.4 bits (67), Expect = 3.4
Identities = 17/66 (25%), Positives = 40/66 (60%)
Query: 3 SADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMHTDPDYSAAYVVI 62
S+D+ S+D+ S+++ S+D+ S+D+ S+D+ S+D+ S+D+ + +++
Sbjct: 1126 SSDSSDSSDSSDSSNSSDSSDSSESSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSD 1185
Query: 63 ETDAED 68
+D+ D
Sbjct: 1186 SSDSSD 1191
Score = 30.0 bits (66), Expect = 4.5
Identities = 16/55 (29%), Positives = 36/55 (65%)
Query: 3 SADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMHTDPDYSA 57
S+++ S+D+ S+D+ S+D+ S+D+ S+D+ S+++ S+D+ +D S+
Sbjct: 662 SSNSSDSSDSSDSSDSSSSSDSSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSS 716
Score = 30.0 bits (66), Expect = 4.5
Identities = 17/66 (25%), Positives = 39/66 (59%)
Query: 3 SADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMHTDPDYSAAYVVI 62
S+++ S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ + ++
Sbjct: 1000 SSNSSDSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSNSSD 1059
Query: 63 ETDAED 68
+D+ D
Sbjct: 1060 SSDSSD 1065
Score = 30.0 bits (66), Expect = 4.5
Identities = 17/66 (25%), Positives = 39/66 (59%)
Query: 3 SADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMHTDPDYSAAYVVI 62
S+D+ S+D+ S+D+ S+D+ S+D+ S+++ S+D+ S+D+ + ++
Sbjct: 1051 SSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSESSDSSDSSNSSDSSDSSDSSDSSDSSD 1110
Query: 63 ETDAED 68
+D+ D
Sbjct: 1111 SSDSSD 1116
Score = 30.0 bits (66), Expect = 4.5
Identities = 17/66 (25%), Positives = 39/66 (59%)
Query: 3 SADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMHTDPDYSAAYVVI 62
S+D+ S+D+ S+D+ S+++ S+D+ S+D+ S+D+ S+D+ + ++
Sbjct: 1063 SSDSSDSSDSSDSSDSSDSSESSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSN 1122
Query: 63 ETDAED 68
+D+ D
Sbjct: 1123 SSDSSD 1128
Score = 30.0 bits (66), Expect = 4.5
Identities = 17/66 (25%), Positives = 39/66 (59%)
Query: 3 SADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMHTDPDYSAAYVVI 62
S+++ S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ + ++
Sbjct: 1081 SSESSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSN 1140
Query: 63 ETDAED 68
+D+ D
Sbjct: 1141 SSDSSD 1146
Score = 30.0 bits (66), Expect = 4.5
Identities = 17/66 (25%), Positives = 39/66 (59%)
Query: 3 SADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMHTDPDYSAAYVVI 62
S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ S+++ + ++
Sbjct: 1105 SSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSSDSSESSDSSDSSDSSDSSD 1164
Query: 63 ETDAED 68
+D+ D
Sbjct: 1165 SSDSSD 1170
Score = 30.0 bits (66), Expect = 4.5
Identities = 17/66 (25%), Positives = 39/66 (59%)
Query: 3 SADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMHTDPDYSAAYVVI 62
S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ S+++ S+D+ + ++
Sbjct: 1111 SSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSSDSSESSDSSDSSDSSDSSDSSDSSD 1170
Query: 63 ETDAED 68
+D+ D
Sbjct: 1171 SSDSSD 1176
Score = 30.0 bits (66), Expect = 4.5
Identities = 17/66 (25%), Positives = 39/66 (59%)
Query: 3 SADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMHTDPDYSAAYVVI 62
S+++ S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ + ++
Sbjct: 1138 SSNSSDSSDSSESSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSD 1197
Query: 63 ETDAED 68
+D+ D
Sbjct: 1198 SSDSSD 1203
Score = 30.0 bits (66), Expect = 4.5
Identities = 17/54 (31%), Positives = 34/54 (62%)
Query: 3 SADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMHTDPDYS 56
S+D+ S+D+ S+D+ S+D+ S+D+ S+++ S+D+ S+D+ D S
Sbjct: 1216 SSDSSDSSDSSDSSDSNESSDSSDSSDSSDSSNSSDSSDSSDSSDSTSDSNDES 1269
Score = 29.6 bits (65), Expect = 5.8
Identities = 17/66 (25%), Positives = 40/66 (60%)
Query: 3 SADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMHTDPDYSAAYVVI 62
S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ S+++ + +++
Sbjct: 746 SSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSDSSN 805
Query: 63 ETDAED 68
+D+ D
Sbjct: 806 SSDSSD 811
Score = 29.6 bits (65), Expect = 5.8
Identities = 17/66 (25%), Positives = 39/66 (59%)
Query: 3 SADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMHTDPDYSAAYVVI 62
S+D+ S+D+ S+++ S+D+ S+D+ S+D+ S+D+ S+D+ + ++
Sbjct: 988 SSDSSDSSDSSDSSNSSDSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSSDSSDSSDSSD 1047
Query: 63 ETDAED 68
+D+ D
Sbjct: 1048 SSDSSD 1053
Score = 29.6 bits (65), Expect = 5.8
Identities = 17/66 (25%), Positives = 39/66 (59%)
Query: 3 SADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMHTDPDYSAAYVVI 62
S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ S+++ + ++
Sbjct: 1012 SSDSSNSSDSSNSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSD 1071
Query: 63 ETDAED 68
+D+ D
Sbjct: 1072 SSDSSD 1077
Score = 29.6 bits (65), Expect = 5.8
Identities = 17/66 (25%), Positives = 39/66 (59%)
Query: 3 SADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMHTDPDYSAAYVVI 62
S+D+ S+D+ S+D+ S+D+ S+D+ S+++ S+D+ S+D+ + ++
Sbjct: 1024 SSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSE 1083
Query: 63 ETDAED 68
+D+ D
Sbjct: 1084 SSDSSD 1089
Score = 29.6 bits (65), Expect = 5.8
Identities = 17/66 (25%), Positives = 39/66 (59%)
Query: 3 SADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMHTDPDYSAAYVVI 62
S+D+ S+D+ S+++ S+D+ S+D+ S+D+ S+D+ S+D+ + ++
Sbjct: 1042 SSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSESSDSSDSSNSSDSSDSSD 1101
Query: 63 ETDAED 68
+D+ D
Sbjct: 1102 SSDSSD 1107
Score = 29.6 bits (65), Expect = 5.8
Identities = 17/66 (25%), Positives = 39/66 (59%)
Query: 3 SADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMHTDPDYSAAYVVI 62
S+D+ S+D+ S+D+ S+++ S+D+ S+D+ S+D+ S+D+ + ++
Sbjct: 1072 SSDSSDSSDSSESSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSD 1131
Query: 63 ETDAED 68
+D+ D
Sbjct: 1132 SSDSSD 1137
Score = 29.6 bits (65), Expect = 5.8
Identities = 17/66 (25%), Positives = 39/66 (59%)
Query: 3 SADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMHTDPDYSAAYVVI 62
S+D+ S+D+ S+D+ S+++ S+D+ S+D+ S+D+ S+D+ + ++
Sbjct: 1129 SSDSSDSSDSSNSSDSSDSSESSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSD 1188
Query: 63 ETDAED 68
+D+ D
Sbjct: 1189 SSDSSD 1194
Score = 29.6 bits (65), Expect = 5.8
Identities = 17/66 (25%), Positives = 39/66 (59%)
Query: 3 SADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMHTDPDYSAAYVVI 62
S+D+ S+D+ S+D+ S+D+ S+++ S+D+ S+D+ S+D+ + ++
Sbjct: 1153 SSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSD 1212
Query: 63 ETDAED 68
+D+ D
Sbjct: 1213 SSDSSD 1218
Score = 29.6 bits (65), Expect = 5.8
Identities = 17/66 (25%), Positives = 39/66 (59%)
Query: 3 SADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMHTDPDYSAAYVVI 62
S+D+ S+D+ S+D+ S+++ S+D+ S+D+ S+D+ S+D+ + ++
Sbjct: 1159 SSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSD 1218
Query: 63 ETDAED 68
+D+ D
Sbjct: 1219 SSDSSD 1224
Score = 29.6 bits (65), Expect = 5.8
Identities = 17/66 (25%), Positives = 39/66 (59%)
Query: 3 SADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMHTDPDYSAAYVVI 62
S+D+ S+D+ S+++ S+D+ S+D+ S+D+ S+D+ S+D+ + ++
Sbjct: 1165 SSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSD 1224
Query: 63 ETDAED 68
+D+ D
Sbjct: 1225 SSDSSD 1230
Score = 29.3 bits (64), Expect = 7.6
Identities = 16/54 (29%), Positives = 35/54 (64%)
Query: 4 ADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMHTDPDYSA 57
+D+ S+D+ S+D+ S+D+ S+D+ S+++ S+D+ S+D+ +D S+
Sbjct: 859 SDSSNSSDSSDSSDSSNSSDSSDSSDSNESSNSSDSSDSSNSSDSDSSDSSNSS 912
Score = 29.3 bits (64), Expect = 7.6
Identities = 17/66 (25%), Positives = 39/66 (59%)
Query: 3 SADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMHTDPDYSAAYVVI 62
S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ S ++ S+D+ + +++
Sbjct: 1195 SSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSNESSDSSDSSDSSDSSNSSDSSD 1254
Query: 63 ETDAED 68
+D+ D
Sbjct: 1255 SSDSSD 1260
Score = 29.3 bits (64), Expect = 7.6
Identities = 17/67 (25%), Positives = 40/67 (59%)
Query: 3 SADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMHTDPDYSAAYVVI 62
S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ S+++ S+D+ + S +
Sbjct: 1210 SSDSSDSSDSSDSSDSSDSSDSNESSDSSDSSDSSDSSNSSDSSDSSDSSDSTSDSNDES 1269
Query: 63 ETDAEDG 69
++ ++ G
Sbjct: 1270 DSQSKSG 1276
Score = 28.9 bits (63), Expect = 9.9
Identities = 15/46 (32%), Positives = 32/46 (69%)
Query: 3 SADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADA 48
S+++ S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ S+D+
Sbjct: 728 SSNSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDS 773
Score = 28.9 bits (63), Expect = 9.9
Identities = 17/66 (25%), Positives = 38/66 (57%)
Query: 3 SADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMHTDPDYSAAYVVI 62
S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ S+D+ S ++ + ++
Sbjct: 1189 SSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSNESSDSSDSSDSSDSSN 1248
Query: 63 ETDAED 68
+D+ D
Sbjct: 1249 SSDSSD 1254
>gi|120587019 zinc finger protein 318 [Homo sapiens]
Length = 2279
Score = 32.7 bits (73), Expect = 0.69
Identities = 20/45 (44%), Positives = 21/45 (46%)
Query: 9 SADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMHTDP 53
SAD S D SAD S D SAD S D SAD +DP
Sbjct: 629 SADRRSSVDRYFSADHCSSVDHRFSADRCSSVDHCFSADRRSSDP 673
>gi|226246554 hypothetical protein LOC643677 [Homo sapiens]
Length = 7081
Score = 29.6 bits (65), Expect = 5.8
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 151 EGKPVWKLLVDMDPRMLVSCIDFR----YITDVLTEEDALEILQKGQIGKKEREKQMLAQ 206
+G+ L +DM+ +ML C D + ++D+L + L+ K Q K + +K +
Sbjct: 5010 QGEEKGGLRIDMEDKMLPKCTDLKAKQLLLSDILNTK-KLQWKSKEQKRKIQEDKNKQVK 5068
Query: 207 GYPAYTTS 214
G P+ TS
Sbjct: 5069 GLPSINTS 5076
>gi|239756039 PREDICTED: hypothetical protein LOC643677 [Homo sapiens]
Length = 6929
Score = 29.6 bits (65), Expect = 5.8
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 151 EGKPVWKLLVDMDPRMLVSCIDFR----YITDVLTEEDALEILQKGQIGKKEREKQMLAQ 206
+G+ L +DM+ +ML C D + ++D+L + L+ K Q K + +K +
Sbjct: 4858 QGEEKGGLRIDMEDKMLPKCTDLKAKQLLLSDILNTK-KLQWKSKEQKRKIQEDKNKQVK 4916
Query: 207 GYPAYTTS 214
G P+ TS
Sbjct: 4917 GLPSINTS 4924
>gi|239750569 PREDICTED: hypothetical protein LOC643677 [Homo sapiens]
Length = 6929
Score = 29.6 bits (65), Expect = 5.8
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 151 EGKPVWKLLVDMDPRMLVSCIDFR----YITDVLTEEDALEILQKGQIGKKEREKQMLAQ 206
+G+ L +DM+ +ML C D + ++D+L + L+ K Q K + +K +
Sbjct: 4858 QGEEKGGLRIDMEDKMLPKCTDLKAKQLLLSDILNTK-KLQWKSKEQKRKIQEDKNKQVK 4916
Query: 207 GYPAYTTS 214
G P+ TS
Sbjct: 4917 GLPSINTS 4924
>gi|239744870 PREDICTED: hypothetical protein LOC643677 [Homo sapiens]
Length = 6929
Score = 29.6 bits (65), Expect = 5.8
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 151 EGKPVWKLLVDMDPRMLVSCIDFR----YITDVLTEEDALEILQKGQIGKKEREKQMLAQ 206
+G+ L +DM+ +ML C D + ++D+L + L+ K Q K + +K +
Sbjct: 4858 QGEEKGGLRIDMEDKMLPKCTDLKAKQLLLSDILNTK-KLQWKSKEQKRKIQEDKNKQVK 4916
Query: 207 GYPAYTTS 214
G P+ TS
Sbjct: 4917 GLPSINTS 4924
>gi|169183850 PREDICTED: similar to hCG1809973 [Homo sapiens]
Length = 144
Score = 28.9 bits (63), Expect = 9.9
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 237 WTRFKVKVG-ADLQDDM-RRCQIIRDMIGPEK-TLMMDANQRWDVPEAVEWMS 286
WT +K V A L DD ++ ++ + +K T +DA ++ DV EWMS
Sbjct: 54 WTYYKASVAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAEEKEDVKTCAEWMS 106
>gi|169179690 PREDICTED: similar to ATP synthase, H+ transporting,
mitochondrial F0 complex, subunit d [Homo sapiens]
Length = 144
Score = 28.9 bits (63), Expect = 9.9
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 237 WTRFKVKVG-ADLQDDM-RRCQIIRDMIGPEK-TLMMDANQRWDVPEAVEWMS 286
WT +K V A L DD ++ ++ + +K T +DA ++ DV EWMS
Sbjct: 54 WTYYKASVAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAEEKEDVKTCAEWMS 106
>gi|169179753 PREDICTED: similar to hCG1809973 [Homo sapiens]
Length = 160
Score = 28.9 bits (63), Expect = 9.9
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 237 WTRFKVKVG-ADLQDDM-RRCQIIRDMIGPEK-TLMMDANQRWDVPEAVEWMS 286
WT +K V A L DD ++ ++ + +K T +DA ++ DV EWMS
Sbjct: 54 WTYYKASVAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAEEKEDVKTCAEWMS 106
>gi|239743684 PREDICTED: hypothetical protein LOC138864 [Homo
sapiens]
Length = 144
Score = 28.9 bits (63), Expect = 9.9
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 237 WTRFKVKVG-ADLQDDM-RRCQIIRDMIGPEK-TLMMDANQRWDVPEAVEWMS 286
WT +K V A L DD ++ ++ + +K T +DA ++ DV EWMS
Sbjct: 54 WTYYKASVAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAEEKEDVKTCAEWMS 106
>gi|54607089 semaphorin 3B isoform 2 precursor [Homo sapiens]
Length = 748
Score = 28.9 bits (63), Expect = 9.9
Identities = 27/117 (23%), Positives = 51/117 (43%), Gaps = 20/117 (17%)
Query: 203 MLAQGYPAYTTSCAWLGY---SDDTLKQLCAQALKDGWTRF---------KVKVGADLQD 250
+LA G A+ +CA++ +++ + +L ++DG + V VG +L
Sbjct: 128 LLACGTGAFHPTCAFVEVGHRAEEPVLRLDPGRIEDGKGKSPYDPRHRAASVLVGEELYS 187
Query: 251 DMRRCQIIRDMIGPEKTLMMDANQRWDV---PEAVEWMSKLAKFKPLWIEEPTSPDD 304
+ D++G + T+ QR + P W+++ K WI E +PDD
Sbjct: 188 G-----VAADLMGRDFTIFRSLGQRPSLRTEPHDSRWLNEPKFVKVFWIPESENPDD 239
>gi|4759092 semaphorin 3B isoform 1 precursor [Homo sapiens]
Length = 749
Score = 28.9 bits (63), Expect = 9.9
Identities = 27/117 (23%), Positives = 51/117 (43%), Gaps = 20/117 (17%)
Query: 203 MLAQGYPAYTTSCAWLGY---SDDTLKQLCAQALKDGWTRF---------KVKVGADLQD 250
+LA G A+ +CA++ +++ + +L ++DG + V VG +L
Sbjct: 128 LLACGTGAFHPTCAFVEVGHRAEEPVLRLDPGRIEDGKGKSPYDPRHRAASVLVGEELYS 187
Query: 251 DMRRCQIIRDMIGPEKTLMMDANQRWDV---PEAVEWMSKLAKFKPLWIEEPTSPDD 304
+ D++G + T+ QR + P W+++ K WI E +PDD
Sbjct: 188 G-----VAADLMGRDFTIFRSLGQRPSLRTEPHDSRWLNEPKFVKVFWIPESENPDD 239
>gi|47419911 transcriptional intermediary factor 1 alpha isoform a
[Homo sapiens]
Length = 1050
Score = 28.9 bits (63), Expect = 9.9
Identities = 22/129 (17%), Positives = 55/129 (42%), Gaps = 3/129 (2%)
Query: 9 SADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMHTDPDYSAAYVVIETDAED 68
SA ++ S + S+ AD+ ++ + + +Y V+++ ++++
Sbjct: 687 SASSVGSRGSSGSSSKPAGADSTHKVPVVMLEPIRIKQENSGPPENYDFPVVIVKQESDE 746
Query: 69 GIKGCGITFTLGKGTEVVVCAVNALAHH--VLNKDLKDIVGDFRGFYRQLTSDGQLRWIG 126
+ + T +++ + + VL D D GD G ++ +S+G+ W+
Sbjct: 747 ESRPQNANYPRSILTSLLLNSSQSSTSEETVLRSDAPDSTGDQPGLHQDNSSNGKSEWLD 806
Query: 127 P-EKGVVHL 134
P +K +H+
Sbjct: 807 PSQKSPLHV 815
>gi|47419909 transcriptional intermediary factor 1 alpha isoform b
[Homo sapiens]
Length = 1016
Score = 28.9 bits (63), Expect = 9.9
Identities = 22/129 (17%), Positives = 55/129 (42%), Gaps = 3/129 (2%)
Query: 9 SADAMVSADAMVSADAMVSADAMVSADAMVSADAMVSADAMHTDPDYSAAYVVIETDAED 68
SA ++ S + S+ AD+ ++ + + +Y V+++ ++++
Sbjct: 653 SASSVGSRGSSGSSSKPAGADSTHKVPVVMLEPIRIKQENSGPPENYDFPVVIVKQESDE 712
Query: 69 GIKGCGITFTLGKGTEVVVCAVNALAHH--VLNKDLKDIVGDFRGFYRQLTSDGQLRWIG 126
+ + T +++ + + VL D D GD G ++ +S+G+ W+
Sbjct: 713 ESRPQNANYPRSILTSLLLNSSQSSTSEETVLRSDAPDSTGDQPGLHQDNSSNGKSEWLD 772
Query: 127 P-EKGVVHL 134
P +K +H+
Sbjct: 773 PSQKSPLHV 781
>gi|14249568 hypothetical protein LOC84933 [Homo sapiens]
Length = 380
Score = 28.9 bits (63), Expect = 9.9
Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 14/107 (13%)
Query: 292 KPLWIEEPTSPDDILGHATISKCHNRVIFKQLLQAKALQFLQIDSCRLGSVNENLSVLLM 351
+P W E T D + T+ K + +++ KALQ S++E LS
Sbjct: 37 EPQWFYEETESSDDVEVLTLKKFKGDLAYRRQEYQKALQ-------EYSSISEKLSSTNF 89
Query: 352 AKKFEIPVCPHAGGVGLCELVQHLIIFDYISVSASLENRVCEYVDHL 398
A K ++ L L +H+ + + ++A+LEN+ DHL
Sbjct: 90 AMKRDV---QEGQARCLAHLGRHM---EALEIAANLENKATN-TDHL 129
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.134 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,599,257
Number of Sequences: 37866
Number of extensions: 702102
Number of successful extensions: 1760
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 1581
Number of HSP's gapped (non-prelim): 138
length of query: 450
length of database: 18,247,518
effective HSP length: 106
effective length of query: 344
effective length of database: 14,233,722
effective search space: 4896400368
effective search space used: 4896400368
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.