Guide to the Human Genome
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Search of human proteins with 41680688

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|41680688 ceramide kinase-like isoform a [Homo sapiens]
         (532 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|41680688 ceramide kinase-like isoform a [Homo sapiens]            1071   0.0  
gi|71896723 ceramide kinase-like isoform b [Homo sapiens]            1057   0.0  
gi|237757361 ceramide kinase-like isoform g [Homo sapiens]            949   0.0  
gi|71896711 ceramide kinase-like isoform d [Homo sapiens]             867   0.0  
gi|71896725 ceramide kinase-like isoform c [Homo sapiens]             533   e-151
gi|20336726 ceramide kinase [Homo sapiens]                            209   5e-54
gi|8922701 acylglycerol kinase [Homo sapiens]                          70   6e-12
gi|217272885 sphingosine kinase 1 isoform 3 [Homo sapiens]             68   2e-11
gi|217272883 sphingosine kinase 1 isoform 3 [Homo sapiens]             68   2e-11
gi|21361088 sphingosine kinase 1 isoform 1 [Homo sapiens]              68   2e-11
gi|217272880 sphingosine kinase 1 isoform 2 [Homo sapiens]             68   2e-11
gi|21361699 sphingosine kinase 2 [Homo sapiens]                        67   5e-11
gi|48255900 SWI/SNF-related matrix-associated actin-dependent re...    33   0.50 
gi|48255898 SWI/SNF-related matrix-associated actin-dependent re...    33   0.50 
gi|39930469 brix domain containing 1 [Homo sapiens]                    32   1.9  
gi|4502897 cleft lip and palate associated transmembrane protein...    32   1.9  
gi|51093832 GTPase activating protein and VPS9 domains 1 [Homo s...    30   4.2  
gi|33356148 formin-like 1 [Homo sapiens]                               30   4.2  
gi|7661950 SH2 domain binding protein 1 [Homo sapiens]                 30   5.5  
gi|55743118 RAB3 GTPase-activating protein [Homo sapiens]              30   7.2  
gi|109948304 smu-1 suppressor of mec-8 and unc-52 homolog [Homo ...    30   7.2  
gi|33598960 alpha-2B-adrenergic receptor [Homo sapiens]                29   9.4  
gi|62243658 PI-3-kinase-related kinase SMG-1 [Homo sapiens]            29   9.4  
gi|11055976 carbohydrate (N-acetylglucosamine 6-O) sulfotransfer...    29   9.4  

>gi|41680688 ceramide kinase-like isoform a [Homo sapiens]
          Length = 532

 Score = 1071 bits (2771), Expect = 0.0
 Identities = 532/532 (100%), Positives = 532/532 (100%)

Query: 1   MPWRRRRNRVSALEGGREEEAPPEAAAVPPALLTSPQQTEAAAERILLRGIFEIGRDSCD 60
           MPWRRRRNRVSALEGGREEEAPPEAAAVPPALLTSPQQTEAAAERILLRGIFEIGRDSCD
Sbjct: 1   MPWRRRRNRVSALEGGREEEAPPEAAAVPPALLTSPQQTEAAAERILLRGIFEIGRDSCD 60

Query: 61  VVLSERALRWRPIQPERPAGDSKYDLLCKEEFIELKDIFSVKLKRRCSVKQQRSGTLLGI 120
           VVLSERALRWRPIQPERPAGDSKYDLLCKEEFIELKDIFSVKLKRRCSVKQQRSGTLLGI
Sbjct: 61  VVLSERALRWRPIQPERPAGDSKYDLLCKEEFIELKDIFSVKLKRRCSVKQQRSGTLLGI 120

Query: 121 TLFICLKKEQNKLKNSTLDLINLSEDHCDIWFRQFKKILAGFPNRPKSLKILLNPQSHKK 180
           TLFICLKKEQNKLKNSTLDLINLSEDHCDIWFRQFKKILAGFPNRPKSLKILLNPQSHKK
Sbjct: 121 TLFICLKKEQNKLKNSTLDLINLSEDHCDIWFRQFKKILAGFPNRPKSLKILLNPQSHKK 180

Query: 181 EATQVYYEKVEPLLKLAGIKTDVTIMEYEGHALSLLKECELQGFDGVVCVGGDGSASEVA 240
           EATQVYYEKVEPLLKLAGIKTDVTIMEYEGHALSLLKECELQGFDGVVCVGGDGSASEVA
Sbjct: 181 EATQVYYEKVEPLLKLAGIKTDVTIMEYEGHALSLLKECELQGFDGVVCVGGDGSASEVA 240

Query: 241 HALLLRAQKNAGMETDRILTPVRAQLPLGLIPAGSTNVLAHSLHGVPHVITATLHIIMGH 300
           HALLLRAQKNAGMETDRILTPVRAQLPLGLIPAGSTNVLAHSLHGVPHVITATLHIIMGH
Sbjct: 241 HALLLRAQKNAGMETDRILTPVRAQLPLGLIPAGSTNVLAHSLHGVPHVITATLHIIMGH 300

Query: 301 VQLVDVCTFSTAGKLLRFGFSAMFGFGGRTLALAEKYRWMSPNQRRDFAVVKALAKLKAE 360
           VQLVDVCTFSTAGKLLRFGFSAMFGFGGRTLALAEKYRWMSPNQRRDFAVVKALAKLKAE
Sbjct: 301 VQLVDVCTFSTAGKLLRFGFSAMFGFGGRTLALAEKYRWMSPNQRRDFAVVKALAKLKAE 360

Query: 361 DCEISFLPFNSSDDVQERRAQGSPKSDCNDQWQMIQGQFLNVSIMAIPCLCSVAPRGLAP 420
           DCEISFLPFNSSDDVQERRAQGSPKSDCNDQWQMIQGQFLNVSIMAIPCLCSVAPRGLAP
Sbjct: 361 DCEISFLPFNSSDDVQERRAQGSPKSDCNDQWQMIQGQFLNVSIMAIPCLCSVAPRGLAP 420

Query: 421 NTRLNNGSMALIIARNTSRPEFIKHLKRYASVKNQFNFPFVETYTVEEVKVHPRNNTGGY 480
           NTRLNNGSMALIIARNTSRPEFIKHLKRYASVKNQFNFPFVETYTVEEVKVHPRNNTGGY
Sbjct: 421 NTRLNNGSMALIIARNTSRPEFIKHLKRYASVKNQFNFPFVETYTVEEVKVHPRNNTGGY 480

Query: 481 NPEEEEDETASENCFPWNVDGDLMEVASEVHIRLHPRLISLYGGSMEEMIPK 532
           NPEEEEDETASENCFPWNVDGDLMEVASEVHIRLHPRLISLYGGSMEEMIPK
Sbjct: 481 NPEEEEDETASENCFPWNVDGDLMEVASEVHIRLHPRLISLYGGSMEEMIPK 532


>gi|71896723 ceramide kinase-like isoform b [Homo sapiens]
          Length = 558

 Score = 1057 bits (2734), Expect = 0.0
 Identities = 532/558 (95%), Positives = 532/558 (95%), Gaps = 26/558 (4%)

Query: 1   MPWRRRRNRVSALEGGREEEAPPEAAAVPPALLTSPQQTEAAAERILLRGIFEIGRDSCD 60
           MPWRRRRNRVSALEGGREEEAPPEAAAVPPALLTSPQQTEAAAERILLRGIFEIGRDSCD
Sbjct: 1   MPWRRRRNRVSALEGGREEEAPPEAAAVPPALLTSPQQTEAAAERILLRGIFEIGRDSCD 60

Query: 61  VVLSERALRWRPIQPERPAGDSKYDLLCKEEFIELKDIFSVKLKRRCSVKQQRSGTLLGI 120
           VVLSERALRWRPIQPERPAGDSKYDLLCKEEFIELKDIFSVKLKRRCSVKQQRSGTLLGI
Sbjct: 61  VVLSERALRWRPIQPERPAGDSKYDLLCKEEFIELKDIFSVKLKRRCSVKQQRSGTLLGI 120

Query: 121 TLFICLKKEQNKLKNSTLDLINLSEDHCDIWFRQFKKILAGFPNRPKSLKILLNPQSHKK 180
           TLFICLKKEQNKLKNSTLDLINLSEDHCDIWFRQFKKILAGFPNRPKSLKILLNPQSHKK
Sbjct: 121 TLFICLKKEQNKLKNSTLDLINLSEDHCDIWFRQFKKILAGFPNRPKSLKILLNPQSHKK 180

Query: 181 EATQVYYEKVEPLLKLAGIKTDVTIMEYEGHALSLLKECELQGFDG-------------- 226
           EATQVYYEKVEPLLKLAGIKTDVTIMEYEGHALSLLKECELQGFDG              
Sbjct: 181 EATQVYYEKVEPLLKLAGIKTDVTIMEYEGHALSLLKECELQGFDGGHRKPLFAIHWSVQ 240

Query: 227 ------------VVCVGGDGSASEVAHALLLRAQKNAGMETDRILTPVRAQLPLGLIPAG 274
                       VVCVGGDGSASEVAHALLLRAQKNAGMETDRILTPVRAQLPLGLIPAG
Sbjct: 241 RLFTGMQTLEPSVVCVGGDGSASEVAHALLLRAQKNAGMETDRILTPVRAQLPLGLIPAG 300

Query: 275 STNVLAHSLHGVPHVITATLHIIMGHVQLVDVCTFSTAGKLLRFGFSAMFGFGGRTLALA 334
           STNVLAHSLHGVPHVITATLHIIMGHVQLVDVCTFSTAGKLLRFGFSAMFGFGGRTLALA
Sbjct: 301 STNVLAHSLHGVPHVITATLHIIMGHVQLVDVCTFSTAGKLLRFGFSAMFGFGGRTLALA 360

Query: 335 EKYRWMSPNQRRDFAVVKALAKLKAEDCEISFLPFNSSDDVQERRAQGSPKSDCNDQWQM 394
           EKYRWMSPNQRRDFAVVKALAKLKAEDCEISFLPFNSSDDVQERRAQGSPKSDCNDQWQM
Sbjct: 361 EKYRWMSPNQRRDFAVVKALAKLKAEDCEISFLPFNSSDDVQERRAQGSPKSDCNDQWQM 420

Query: 395 IQGQFLNVSIMAIPCLCSVAPRGLAPNTRLNNGSMALIIARNTSRPEFIKHLKRYASVKN 454
           IQGQFLNVSIMAIPCLCSVAPRGLAPNTRLNNGSMALIIARNTSRPEFIKHLKRYASVKN
Sbjct: 421 IQGQFLNVSIMAIPCLCSVAPRGLAPNTRLNNGSMALIIARNTSRPEFIKHLKRYASVKN 480

Query: 455 QFNFPFVETYTVEEVKVHPRNNTGGYNPEEEEDETASENCFPWNVDGDLMEVASEVHIRL 514
           QFNFPFVETYTVEEVKVHPRNNTGGYNPEEEEDETASENCFPWNVDGDLMEVASEVHIRL
Sbjct: 481 QFNFPFVETYTVEEVKVHPRNNTGGYNPEEEEDETASENCFPWNVDGDLMEVASEVHIRL 540

Query: 515 HPRLISLYGGSMEEMIPK 532
           HPRLISLYGGSMEEMIPK
Sbjct: 541 HPRLISLYGGSMEEMIPK 558


>gi|237757361 ceramide kinase-like isoform g [Homo sapiens]
          Length = 514

 Score =  949 bits (2452), Expect = 0.0
 Identities = 487/558 (87%), Positives = 488/558 (87%), Gaps = 70/558 (12%)

Query: 1   MPWRRRRNRVSALEGGREEEAPPEAAAVPPALLTSPQQTEAAAERILLRGIFEIGRDSCD 60
           MPWRRRRNRVSALEGGREEEAPPEAAAVPPALLTSPQQTEAAAERILLRGIFEIGRDSCD
Sbjct: 1   MPWRRRRNRVSALEGGREEEAPPEAAAVPPALLTSPQQTEAAAERILLRGIFEIGRDSCD 60

Query: 61  VVLSERALRWRPIQPERPAGDSKYDLLCKEEFIELKDIFSVKLKRRCSVKQQRSGTLLGI 120
           VVLSERALRWRPIQPERPAGDSKYDLLCKEEFIELKDIFSVKLKRRCSVKQQRSGTLLGI
Sbjct: 61  VVLSERALRWRPIQPERPAGDSKYDLLCKEEFIELKDIFSVKLKRRCSVKQQRSGTLLGI 120

Query: 121 TLFICLKKEQNKLKNSTLDLINLSEDHCDIWFRQFKKILAGFPNRPKSLKILLNPQSHKK 180
           TLFICLKKEQNKLKNSTLDLINLSEDHCDIWFRQFKKILA                    
Sbjct: 121 TLFICLKKEQNKLKNSTLDLINLSEDHCDIWFRQFKKILA-------------------- 160

Query: 181 EATQVYYEKVEPLLKLAGIKTDVTIMEYEGHALSLLKECELQGFDG-------------- 226
                                   +MEYEGHALSLLKECELQGFDG              
Sbjct: 161 ------------------------VMEYEGHALSLLKECELQGFDGGHRKPLFAIHWSVQ 196

Query: 227 ------------VVCVGGDGSASEVAHALLLRAQKNAGMETDRILTPVRAQLPLGLIPAG 274
                       VVCVGGDGSASEVAHALLLRAQKNAGMETDRILTPVRAQLPLGLIPAG
Sbjct: 197 RLFTGMQTLEPSVVCVGGDGSASEVAHALLLRAQKNAGMETDRILTPVRAQLPLGLIPAG 256

Query: 275 STNVLAHSLHGVPHVITATLHIIMGHVQLVDVCTFSTAGKLLRFGFSAMFGFGGRTLALA 334
           STNVLAHSLHGVPHVITATLHIIMGHVQLVDVCTFSTAGKLLRFGFSAMFGFGGRTLALA
Sbjct: 257 STNVLAHSLHGVPHVITATLHIIMGHVQLVDVCTFSTAGKLLRFGFSAMFGFGGRTLALA 316

Query: 335 EKYRWMSPNQRRDFAVVKALAKLKAEDCEISFLPFNSSDDVQERRAQGSPKSDCNDQWQM 394
           EKYRWMSPNQRRDFAVVKALAKLKAEDCEISFLPFNSSDDVQERRAQGSPKSDCNDQWQM
Sbjct: 317 EKYRWMSPNQRRDFAVVKALAKLKAEDCEISFLPFNSSDDVQERRAQGSPKSDCNDQWQM 376

Query: 395 IQGQFLNVSIMAIPCLCSVAPRGLAPNTRLNNGSMALIIARNTSRPEFIKHLKRYASVKN 454
           IQGQFLNVSIMAIPCLCSVAPRGLAPNTRLNNGSMALIIARNTSRPEFIKHLKRYASVKN
Sbjct: 377 IQGQFLNVSIMAIPCLCSVAPRGLAPNTRLNNGSMALIIARNTSRPEFIKHLKRYASVKN 436

Query: 455 QFNFPFVETYTVEEVKVHPRNNTGGYNPEEEEDETASENCFPWNVDGDLMEVASEVHIRL 514
           QFNFPFVETYTVEEVKVHPRNNTGGYNPEEEEDETASENCFPWNVDGDLMEVASEVHIRL
Sbjct: 437 QFNFPFVETYTVEEVKVHPRNNTGGYNPEEEEDETASENCFPWNVDGDLMEVASEVHIRL 496

Query: 515 HPRLISLYGGSMEEMIPK 532
           HPRLISLYGGSMEEMIPK
Sbjct: 497 HPRLISLYGGSMEEMIPK 514


>gi|71896711 ceramide kinase-like isoform d [Homo sapiens]
          Length = 463

 Score =  867 bits (2241), Expect = 0.0
 Identities = 449/532 (84%), Positives = 455/532 (85%), Gaps = 69/532 (12%)

Query: 1   MPWRRRRNRVSALEGGREEEAPPEAAAVPPALLTSPQQTEAAAERILLRGIFEIGRDSCD 60
           MPWRRRRNRVSALEGGREEEAPPEAAAVPPALLTSPQQTEAAAERILLRGIFEIGRDSCD
Sbjct: 1   MPWRRRRNRVSALEGGREEEAPPEAAAVPPALLTSPQQTEAAAERILLRGIFEIGRDSCD 60

Query: 61  VVLSERALRWRPIQPERPAGDSKYDLLCKEEFIELKDIFSVKLKRRCSVKQQRSGTLLGI 120
           VVLSERALRWRPIQPERPAGDSKYDLLCKEEFIELKDIFSVKLKRRCSVKQQRSGTLLGI
Sbjct: 61  VVLSERALRWRPIQPERPAGDSKYDLLCKEEFIELKDIFSVKLKRRCSVKQQRSGTLLGI 120

Query: 121 TLFICLKKEQNKLKNSTLDLINLSEDHCDIWFRQFKKILAGFPNRPKSLKILLNPQSHKK 180
           TLFICLKKEQNKLKNSTLDLINLSEDHCDIWFRQFKKILAGFPNRPKSLKILLNPQSHKK
Sbjct: 121 TLFICLKKEQNKLKNSTLDLINLSEDHCDIWFRQFKKILAGFPNRPKSLKILLNPQSHKK 180

Query: 181 EATQVYYEKVEPLLKLAGIKTDVTIMEYEGHALSLLKECELQGFDGVVCVGGDGSASEVA 240
           EATQVYYEKVEPLLKLAGIKTDVT                              S + +A
Sbjct: 181 EATQVYYEKVEPLLKLAGIKTDVT-----------------------------RSTNVLA 211

Query: 241 HALLLRAQKNAGMETDRILTPVRAQLPLGLIPAGSTNVLAHSLHGVPHVITATLHIIMGH 300
           H+L                              G  +V+  +LH           IIMGH
Sbjct: 212 HSL-----------------------------HGVPHVITATLH-----------IIMGH 231

Query: 301 VQLVDVCTFSTAGKLLRFGFSAMFGFGGRTLALAEKYRWMSPNQRRDFAVVKALAKLKAE 360
           VQLVDVCTFSTAGKLLRFGFSAMFGFGGRTLALAEKYRWMSPNQRRDFAVVKALAKLKAE
Sbjct: 232 VQLVDVCTFSTAGKLLRFGFSAMFGFGGRTLALAEKYRWMSPNQRRDFAVVKALAKLKAE 291

Query: 361 DCEISFLPFNSSDDVQERRAQGSPKSDCNDQWQMIQGQFLNVSIMAIPCLCSVAPRGLAP 420
           DCEISFLPFNSSDDVQERRAQGSPKSDCNDQWQMIQGQFLNVSIMAIPCLCSVAPRGLAP
Sbjct: 292 DCEISFLPFNSSDDVQERRAQGSPKSDCNDQWQMIQGQFLNVSIMAIPCLCSVAPRGLAP 351

Query: 421 NTRLNNGSMALIIARNTSRPEFIKHLKRYASVKNQFNFPFVETYTVEEVKVHPRNNTGGY 480
           NTRLNNGSMALIIARNTSRPEFIKHLKRYASVKNQFNFPFVETYTVEEVKVHPRNNTGGY
Sbjct: 352 NTRLNNGSMALIIARNTSRPEFIKHLKRYASVKNQFNFPFVETYTVEEVKVHPRNNTGGY 411

Query: 481 NPEEEEDETASENCFPWNVDGDLMEVASEVHIRLHPRLISLYGGSMEEMIPK 532
           NPEEEEDETASENCFPWNVDGDLMEVASEVHIRLHPRLISLYGGSMEEMIPK
Sbjct: 412 NPEEEEDETASENCFPWNVDGDLMEVASEVHIRLHPRLISLYGGSMEEMIPK 463


>gi|71896725 ceramide kinase-like isoform c [Homo sapiens]
          Length = 419

 Score =  533 bits (1373), Expect = e-151
 Identities = 261/262 (99%), Positives = 261/262 (99%)

Query: 271 IPAGSTNVLAHSLHGVPHVITATLHIIMGHVQLVDVCTFSTAGKLLRFGFSAMFGFGGRT 330
           I AGSTNVLAHSLHGVPHVITATLHIIMGHVQLVDVCTFSTAGKLLRFGFSAMFGFGGRT
Sbjct: 158 ILAGSTNVLAHSLHGVPHVITATLHIIMGHVQLVDVCTFSTAGKLLRFGFSAMFGFGGRT 217

Query: 331 LALAEKYRWMSPNQRRDFAVVKALAKLKAEDCEISFLPFNSSDDVQERRAQGSPKSDCND 390
           LALAEKYRWMSPNQRRDFAVVKALAKLKAEDCEISFLPFNSSDDVQERRAQGSPKSDCND
Sbjct: 218 LALAEKYRWMSPNQRRDFAVVKALAKLKAEDCEISFLPFNSSDDVQERRAQGSPKSDCND 277

Query: 391 QWQMIQGQFLNVSIMAIPCLCSVAPRGLAPNTRLNNGSMALIIARNTSRPEFIKHLKRYA 450
           QWQMIQGQFLNVSIMAIPCLCSVAPRGLAPNTRLNNGSMALIIARNTSRPEFIKHLKRYA
Sbjct: 278 QWQMIQGQFLNVSIMAIPCLCSVAPRGLAPNTRLNNGSMALIIARNTSRPEFIKHLKRYA 337

Query: 451 SVKNQFNFPFVETYTVEEVKVHPRNNTGGYNPEEEEDETASENCFPWNVDGDLMEVASEV 510
           SVKNQFNFPFVETYTVEEVKVHPRNNTGGYNPEEEEDETASENCFPWNVDGDLMEVASEV
Sbjct: 338 SVKNQFNFPFVETYTVEEVKVHPRNNTGGYNPEEEEDETASENCFPWNVDGDLMEVASEV 397

Query: 511 HIRLHPRLISLYGGSMEEMIPK 532
           HIRLHPRLISLYGGSMEEMIPK
Sbjct: 398 HIRLHPRLISLYGGSMEEMIPK 419



 Score =  326 bits (836), Expect = 3e-89
 Identities = 162/164 (98%), Positives = 162/164 (98%)

Query: 1   MPWRRRRNRVSALEGGREEEAPPEAAAVPPALLTSPQQTEAAAERILLRGIFEIGRDSCD 60
           MPWRRRRNRVSALEGGREEEAPPEAAAVPPALLTSPQQTEAAAERILLRGIFEIGRDSCD
Sbjct: 1   MPWRRRRNRVSALEGGREEEAPPEAAAVPPALLTSPQQTEAAAERILLRGIFEIGRDSCD 60

Query: 61  VVLSERALRWRPIQPERPAGDSKYDLLCKEEFIELKDIFSVKLKRRCSVKQQRSGTLLGI 120
           VVLSERALRWRPIQPERPAGDSKYDLLCKEEFIELKDIFSVKLKRRCSVKQQRSGTLLGI
Sbjct: 61  VVLSERALRWRPIQPERPAGDSKYDLLCKEEFIELKDIFSVKLKRRCSVKQQRSGTLLGI 120

Query: 121 TLFICLKKEQNKLKNSTLDLINLSEDHCDIWFRQFKKILAGFPN 164
           TLFICLKKEQNKLKNSTLDLINLSEDHCDIWFRQFKKILAG  N
Sbjct: 121 TLFICLKKEQNKLKNSTLDLINLSEDHCDIWFRQFKKILAGSTN 164


>gi|20336726 ceramide kinase [Homo sapiens]
          Length = 537

 Score =  209 bits (532), Expect = 5e-54
 Identities = 149/532 (28%), Positives = 256/532 (48%), Gaps = 63/532 (11%)

Query: 48  LRGIFEIGRDSCDVVLSE-RALR--WRPIQPERPAGDSKYDLLCKEEFIELKDIFSVKLK 104
           L+ +  + +  C V L   RAL   WR   P   A  +    +   E I +++   V  K
Sbjct: 10  LQSVLWVKQQRCAVSLEPARALLRWWRSPGPGAGAPGADACSVPVSEIIAVEET-DVHGK 68

Query: 105 RRCSVKQQRSGTLLGITLFICLKKEQNKLKNSTLDLINLSEDHCDIWFRQFKKILAGFPN 164
            + S K Q+       T+    +  +++ K + +      E  C +W +  +++L    +
Sbjct: 69  HQGSGKWQKMEKPYAFTVHCVKRARRHRWKWAQVTFWCPEEQLCHLWLQTLREMLEKLTS 128

Query: 165 RPKSLKILLNPQSHKKEATQVYYEKVEPLLKLAGIKTDVTIMEYEGHALSLLKECELQGF 224
           RPK L + +NP   K +  ++Y  KV PL  LA I TD+ + E+   A   L E  +  +
Sbjct: 129 RPKHLLVFINPFGGKGQGKRIYERKVAPLFTLASITTDIIVTEHANQAKETLYEINIDKY 188

Query: 225 DGVVCVGGDGSASEVAHALLLRAQKNAGMETDR---ILTPVRAQLPLGLIPAGSTNVLAH 281
           DG+VCVGGDG  SEV H L+ R Q++AG++ +    +L P  + L +G+IPAGST+ + +
Sbjct: 189 DGIVCVGGDGMFSEVLHGLIGRTQRSAGVDQNHPRAVLVP--SSLRIGIIPAGSTDCVCY 246

Query: 282 SLHGVPHVITATLHIIMGHVQLVDVCTFSTAGKLLRFGFSAM-FGFGGRTLALAEKYRWM 340
           S  G     T+ LHI++G    +DV +      LLR+  S + +GF G  +  +EK RW+
Sbjct: 247 STVGTSDAETSALHIVVGDSLAMDVSSVHHNSTLLRYSVSLLGYGFYGDIIKDSEKKRWL 306

Query: 341 SPNQRRDFAVVKALAKLKAEDCEISFLPFNSS------------------------DDVQ 376
               R DF+ +K        +  +SFLP   +                        ++ Q
Sbjct: 307 G-LARYDFSGLKTFLSHHCYEGTVSFLPAQHTVGSPRDRKPCRAGCFVCRQSKQQLEEEQ 365

Query: 377 ERRAQGSPKSDCNDQWQMIQGQFLNVSIMAIPCLCSVAPRGLAPNTRLNNGSMALIIARN 436
           ++   G   ++  ++WQ++ G+FL ++   + C C  +PRGL+P   L +GS  LI+ R 
Sbjct: 366 KKALYGLEAAEDVEEWQVVCGKFLAINATNMSCACRRSPRGLSPAAHLGDGSSDLILIRK 425

Query: 437 TSRPEFIKHLKRYASVKNQFNFPFVETYTVEEVKVHPRNNTGGYNPEEEEDETASE---- 492
            SR  F++ L R+ + ++QF+F FVE Y V++ +   ++        E+ED    E    
Sbjct: 426 CSRFNFLRFLIRHTNQQDQFDFTFVEVYRVKKFQFTSKH-------MEDEDSDLKEGGKK 478

Query: 493 ----------NC------FPWNVDGDLMEVASEVHIRLHPRLISLYGGSMEE 528
                     +C        WN DG+++  +  + +R+H +L+ L+   +EE
Sbjct: 479 RFGHICSSHPSCCCTVSNSSWNCDGEVLH-SPAIEVRVHCQLVRLFARGIEE 529


>gi|8922701 acylglycerol kinase [Homo sapiens]
          Length = 422

 Score = 69.7 bits (169), Expect = 6e-12
 Identities = 43/145 (29%), Positives = 73/145 (50%), Gaps = 18/145 (12%)

Query: 167 KSLKILLNPQSHKKEATQVYYEKVEPLLKLAGIKTDVTIMEYEGHALSLLKECELQGFDG 226
           K   + LNP + K +A  ++ +   P+L L+G+   +   +YEG A  LL+   ++  D 
Sbjct: 61  KKATVFLNPAACKGKARTLFEKNAAPILHLSGMDVTIVKTDYEGQAKKLLE--LMENTDV 118

Query: 227 VVCVGGDGSASEVAHALLLRAQKNAGMETDRILTPVRAQLPLGLIPAGSTNVLAHSL--- 283
           ++  GGDG+  EV   +L R  +              +++P+G IP G T+ L+H+L   
Sbjct: 119 IIVAGGDGTLQEVVTGVLRRTDE-----------ATFSKIPIGFIPLGETSSLSHTLFAE 167

Query: 284 --HGVPHVITATLHIIMGHVQLVDV 306
             + V H+  ATL I+ G    +DV
Sbjct: 168 SGNKVQHITDATLAIVKGETVPLDV 192


>gi|217272885 sphingosine kinase 1 isoform 3 [Homo sapiens]
          Length = 384

 Score = 67.8 bits (164), Expect = 2e-11
 Identities = 63/214 (29%), Positives = 95/214 (44%), Gaps = 22/214 (10%)

Query: 165 RPKSLKILLNPQSHKKEATQVYYEKVEPLLKLAGIKTDVTIMEYEGHALSLLKECELQGF 224
           RP  + +LLNP+  K +A Q++   V+PLL  A I   + + E   HA  L++  EL  +
Sbjct: 13  RPCRVLVLLNPRGGKGKALQLFRSHVQPLLAEAEISFTLMLTERRNHARELVRSEELGRW 72

Query: 225 DGVVCVGGDGSASEVAHALLLRAQKNAGMETDRILTPVRAQLPLGLIPAGSTNVLAHSLH 284
           D +V + GDG   EV + L+ R      +           Q PL  +PAGS N LA SL+
Sbjct: 73  DALVVMSGDGLMHEVVNGLMERPDWETAI-----------QKPLCSLPAGSGNALAASLN 121

Query: 285 ---GVPHV------ITATLHIIMGHVQLVDVCTFSTAGKLLRFG-FSAMFGFGGRTLALA 334
              G   V         TL +    +  +++ +  TA  L  F   S  +GF       +
Sbjct: 122 HYAGYEQVTNEDLLTNCTLLLCRRLLSPMNLLSLHTASGLRLFSVLSLAWGFIADVDLES 181

Query: 335 EKYRWMSPNQRRDFAVVKALAKLKAEDCEISFLP 368
           EKYR +    R        LA L+     +++LP
Sbjct: 182 EKYRRLG-EMRFTLGTFLRLAALRTYRGRLAYLP 214


>gi|217272883 sphingosine kinase 1 isoform 3 [Homo sapiens]
          Length = 384

 Score = 67.8 bits (164), Expect = 2e-11
 Identities = 63/214 (29%), Positives = 95/214 (44%), Gaps = 22/214 (10%)

Query: 165 RPKSLKILLNPQSHKKEATQVYYEKVEPLLKLAGIKTDVTIMEYEGHALSLLKECELQGF 224
           RP  + +LLNP+  K +A Q++   V+PLL  A I   + + E   HA  L++  EL  +
Sbjct: 13  RPCRVLVLLNPRGGKGKALQLFRSHVQPLLAEAEISFTLMLTERRNHARELVRSEELGRW 72

Query: 225 DGVVCVGGDGSASEVAHALLLRAQKNAGMETDRILTPVRAQLPLGLIPAGSTNVLAHSLH 284
           D +V + GDG   EV + L+ R      +           Q PL  +PAGS N LA SL+
Sbjct: 73  DALVVMSGDGLMHEVVNGLMERPDWETAI-----------QKPLCSLPAGSGNALAASLN 121

Query: 285 ---GVPHV------ITATLHIIMGHVQLVDVCTFSTAGKLLRFG-FSAMFGFGGRTLALA 334
              G   V         TL +    +  +++ +  TA  L  F   S  +GF       +
Sbjct: 122 HYAGYEQVTNEDLLTNCTLLLCRRLLSPMNLLSLHTASGLRLFSVLSLAWGFIADVDLES 181

Query: 335 EKYRWMSPNQRRDFAVVKALAKLKAEDCEISFLP 368
           EKYR +    R        LA L+     +++LP
Sbjct: 182 EKYRRLG-EMRFTLGTFLRLAALRTYRGRLAYLP 214


>gi|21361088 sphingosine kinase 1 isoform 1 [Homo sapiens]
          Length = 398

 Score = 67.8 bits (164), Expect = 2e-11
 Identities = 63/214 (29%), Positives = 95/214 (44%), Gaps = 22/214 (10%)

Query: 165 RPKSLKILLNPQSHKKEATQVYYEKVEPLLKLAGIKTDVTIMEYEGHALSLLKECELQGF 224
           RP  + +LLNP+  K +A Q++   V+PLL  A I   + + E   HA  L++  EL  +
Sbjct: 27  RPCRVLVLLNPRGGKGKALQLFRSHVQPLLAEAEISFTLMLTERRNHARELVRSEELGRW 86

Query: 225 DGVVCVGGDGSASEVAHALLLRAQKNAGMETDRILTPVRAQLPLGLIPAGSTNVLAHSLH 284
           D +V + GDG   EV + L+ R      +           Q PL  +PAGS N LA SL+
Sbjct: 87  DALVVMSGDGLMHEVVNGLMERPDWETAI-----------QKPLCSLPAGSGNALAASLN 135

Query: 285 ---GVPHV------ITATLHIIMGHVQLVDVCTFSTAGKLLRFG-FSAMFGFGGRTLALA 334
              G   V         TL +    +  +++ +  TA  L  F   S  +GF       +
Sbjct: 136 HYAGYEQVTNEDLLTNCTLLLCRRLLSPMNLLSLHTASGLRLFSVLSLAWGFIADVDLES 195

Query: 335 EKYRWMSPNQRRDFAVVKALAKLKAEDCEISFLP 368
           EKYR +    R        LA L+     +++LP
Sbjct: 196 EKYRRLG-EMRFTLGTFLRLAALRTYRGRLAYLP 228


>gi|217272880 sphingosine kinase 1 isoform 2 [Homo sapiens]
          Length = 470

 Score = 67.8 bits (164), Expect = 2e-11
 Identities = 63/214 (29%), Positives = 95/214 (44%), Gaps = 22/214 (10%)

Query: 165 RPKSLKILLNPQSHKKEATQVYYEKVEPLLKLAGIKTDVTIMEYEGHALSLLKECELQGF 224
           RP  + +LLNP+  K +A Q++   V+PLL  A I   + + E   HA  L++  EL  +
Sbjct: 99  RPCRVLVLLNPRGGKGKALQLFRSHVQPLLAEAEISFTLMLTERRNHARELVRSEELGRW 158

Query: 225 DGVVCVGGDGSASEVAHALLLRAQKNAGMETDRILTPVRAQLPLGLIPAGSTNVLAHSLH 284
           D +V + GDG   EV + L+ R      +           Q PL  +PAGS N LA SL+
Sbjct: 159 DALVVMSGDGLMHEVVNGLMERPDWETAI-----------QKPLCSLPAGSGNALAASLN 207

Query: 285 ---GVPHV------ITATLHIIMGHVQLVDVCTFSTAGKLLRFG-FSAMFGFGGRTLALA 334
              G   V         TL +    +  +++ +  TA  L  F   S  +GF       +
Sbjct: 208 HYAGYEQVTNEDLLTNCTLLLCRRLLSPMNLLSLHTASGLRLFSVLSLAWGFIADVDLES 267

Query: 335 EKYRWMSPNQRRDFAVVKALAKLKAEDCEISFLP 368
           EKYR +    R        LA L+     +++LP
Sbjct: 268 EKYRRLG-EMRFTLGTFLRLAALRTYRGRLAYLP 300


>gi|21361699 sphingosine kinase 2 [Homo sapiens]
          Length = 654

 Score = 66.6 bits (161), Expect = 5e-11
 Identities = 58/214 (27%), Positives = 97/214 (45%), Gaps = 22/214 (10%)

Query: 165 RPKSLKILLNPQSHKKEATQVYYEKVEPLLKLAGIKTDVTIMEYEGHALSLLKECELQGF 224
           RP  L +L+NP   +  A Q     V P++  AG+  ++   E + HA  L++   L  +
Sbjct: 179 RPPRLLLLVNPFGGRGLAWQWCKNHVLPMISEAGLSFNLIQTERQNHARELVQGLSLSEW 238

Query: 225 DGVVCVGGDGSASEVAHALLLRAQKNAGMETDRILTPVRAQLPLGLIPAGSTNVLAHSLH 284
           DG+V V GDG   EV + LL           DR       ++P+G++P GS N LA +++
Sbjct: 239 DGIVTVSGDGLLHEVLNGLL-----------DRPDWEEAVKMPVGILPCGSGNALAGAVN 287

Query: 285 ---------GVPHVITATLHIIMGHVQLVDVCTFSTAGKLLRFGF-SAMFGFGGRTLALA 334
                    G+  ++  +L +  G    +D+ + + A     F F S  +GF       +
Sbjct: 288 QHGGFEPALGLDLLLNCSLLLCRGGGHPLDLLSVTLASGSRCFSFLSVAWGFVSDVDIQS 347

Query: 335 EKYRWMSPNQRRDFAVVKALAKLKAEDCEISFLP 368
           E++R +  + R     V  LA L      +S+LP
Sbjct: 348 ERFRALG-SARFTLGTVLGLATLHTYRGRLSYLP 380


>gi|48255900 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin a2 isoform a [Homo sapiens]
          Length = 1590

 Score = 33.5 bits (75), Expect = 0.50
 Identities = 43/174 (24%), Positives = 69/174 (39%), Gaps = 32/174 (18%)

Query: 15  GGREEEAPPEAAAVPPALLTSPQQTEAAAERILLRGIFEIGRDSCDVVLSERALRWRPIQ 74
           GGR   APP AA  P A +  P   + A            G+ S  + L ++  R  PIQ
Sbjct: 284 GGRPSPAPPAAAQPPAAAVPGPSVPQPAP-----------GQPSPVLQLQQKQSRISPIQ 332

Query: 75  PERPAGDSKYDLLCKEEFIELKDIFSVKLKRRCSVKQQRSGTLLGITLFICLKKEQNKLK 134
             +P G    ++L + E+         +L+ R + + Q    L G        K   +LK
Sbjct: 333 --KPQGLDPVEILQEREY---------RLQARIAHRIQELENLPGSLPPDLRTKATVELK 381

Query: 135 NSTLDLINLSEDHCDIWFRQFKKILAGFPNRPKSLKILLNPQSHKKEATQVYYE 188
              L L+N          RQ ++ +     R  +L+  LN +++K+   Q   E
Sbjct: 382 --ALRLLNFQ--------RQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLRE 425


>gi|48255898 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin a2 isoform b [Homo sapiens]
          Length = 1572

 Score = 33.5 bits (75), Expect = 0.50
 Identities = 43/174 (24%), Positives = 69/174 (39%), Gaps = 32/174 (18%)

Query: 15  GGREEEAPPEAAAVPPALLTSPQQTEAAAERILLRGIFEIGRDSCDVVLSERALRWRPIQ 74
           GGR   APP AA  P A +  P   + A            G+ S  + L ++  R  PIQ
Sbjct: 284 GGRPSPAPPAAAQPPAAAVPGPSVPQPAP-----------GQPSPVLQLQQKQSRISPIQ 332

Query: 75  PERPAGDSKYDLLCKEEFIELKDIFSVKLKRRCSVKQQRSGTLLGITLFICLKKEQNKLK 134
             +P G    ++L + E+         +L+ R + + Q    L G        K   +LK
Sbjct: 333 --KPQGLDPVEILQEREY---------RLQARIAHRIQELENLPGSLPPDLRTKATVELK 381

Query: 135 NSTLDLINLSEDHCDIWFRQFKKILAGFPNRPKSLKILLNPQSHKKEATQVYYE 188
              L L+N          RQ ++ +     R  +L+  LN +++K+   Q   E
Sbjct: 382 --ALRLLNFQ--------RQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLRE 425


>gi|39930469 brix domain containing 1 [Homo sapiens]
          Length = 306

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 7/106 (6%)

Query: 118 LGITLFICLKKEQN-KLKNSTLDLINLSEDHCDIW--FRQFKKILAGFPNRPKSLKILLN 174
           LGI  F+ LK  +N K    T  ++  + D  D+   +R+ K +L  F   P    I L 
Sbjct: 119 LGIENFVSLKDIKNSKCPEGTKPMLIFAGDDFDVTEDYRRLKSLLIDFFRGPTVSNIRLA 178

Query: 175 PQSHKKEAT----QVYYEKVEPLLKLAGIKTDVTIMEYEGHALSLL 216
              +    T    ++Y+   + LLK +G +T    +E  G +L L+
Sbjct: 179 GLEYVLHFTALNGKIYFRSYKLLLKKSGCRTPRIELEEMGPSLDLV 224


>gi|4502897 cleft lip and palate associated transmembrane protein 1
           [Homo sapiens]
          Length = 669

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 2/84 (2%)

Query: 373 DDVQERRAQGSPKSDCNDQWQMIQGQFLNVSIMAIPCLCSVAPRGLAPNTRLNNGSMALI 432
           D   E + Q  P     + WQ+I+G    + I  I  + S   RG AP  +   G    +
Sbjct: 34  DPPAETQPQNPPAQPAPNAWQVIKGVLFRIFI--IWAISSWFRRGPAPQDQAGPGGAPRV 91

Query: 433 IARNTSRPEFIKHLKRYASVKNQF 456
            +RN    + + +L  Y S    F
Sbjct: 92  ASRNLFPKDTLMNLHVYISEHEHF 115


>gi|51093832 GTPase activating protein and VPS9 domains 1 [Homo
            sapiens]
          Length = 1487

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 7/69 (10%)

Query: 3    WRRRRNRVSALEGGREEEAPPEAAAVPPALLTSPQQTEAAAERILLRGIFEIGRDSCDVV 62
            W RR        G  E E PP AA    +L+ +P  + ++  +   RG  E  +DS D  
Sbjct: 945  WNRR-------PGNEERELPPAAAIGATSLVAAPHSSSSSPSKDSSRGETEERKDSDDEK 997

Query: 63   LSERALRWR 71
                   WR
Sbjct: 998  SDRNRPWWR 1006


>gi|33356148 formin-like 1 [Homo sapiens]
          Length = 1100

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 21/74 (28%), Positives = 28/74 (37%), Gaps = 4/74 (5%)

Query: 7   RNRVSALEGGREEEAPPEAAAVPPALLTSPQQTEAAAERILLRGIFEIGRDSCDVVLSER 66
           R R S          PPE    PPA  T P   E   E +  +G+  I R   D V    
Sbjct: 444 RERFSESTAMGASRRPPEPEKAPPAAPTRPSALELKVEELEEKGLIRILRGPGDAV---- 499

Query: 67  ALRWRPIQPERPAG 80
           ++   P+    P+G
Sbjct: 500 SIEILPVAVATPSG 513


>gi|7661950 SH2 domain binding protein 1 [Homo sapiens]
          Length = 1173

 Score = 30.0 bits (66), Expect = 5.5
 Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 16/80 (20%)

Query: 155 FKKILAGFPNRPKSLKILLN-------------PQSHKKEATQVYYEKVEPLLKLAGI-- 199
           F+K+L  +PN  +++KIL +              + H K+ T+ Y + VE  ++LA I  
Sbjct: 364 FEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQILE 423

Query: 200 KTDVT-IMEYEGHALSLLKE 218
           +TD+   +   G A  +L+E
Sbjct: 424 QTDIQGALSAYGTATRILQE 443


>gi|55743118 RAB3 GTPase-activating protein [Homo sapiens]
          Length = 981

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 27/103 (26%), Positives = 39/103 (37%), Gaps = 5/103 (4%)

Query: 156 KKILAGFPNRPKSLKILLNPQSHKKEATQVYYEKVEPLLKLAG-----IKTDVTIMEYEG 210
           KKI+    +    +    NP+  K E        VE L+  A        T+    E E 
Sbjct: 805 KKIIKQIISHSSKVLHFPNPEDKKLEEIIHQITNVEALIARARSLKAKFGTEKCEQEEEK 864

Query: 211 HALSLLKECELQGFDGVVCVGGDGSASEVAHALLLRAQKNAGM 253
             L     C L+  + +V   G G A  + H L + AQ+ A M
Sbjct: 865 EDLERFVSCLLEQPEVLVTGAGRGHAGRIIHKLFVNAQRAAAM 907


>gi|109948304 smu-1 suppressor of mec-8 and unc-52 homolog [Homo
           sapiens]
          Length = 513

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 27/146 (18%), Positives = 61/146 (41%), Gaps = 12/146 (8%)

Query: 92  FIELKDIFSVKLKRRCSVKQQRSGTLLG-ITLFICLKKEQNKLKNSTLDLINLSEDHCDI 150
           FIE+ +  + K+++    + Q +  ++    L +C  ++   L     D          +
Sbjct: 237 FIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGAQD------GKIKV 290

Query: 151 WFRQFKKILAGFPN-RPKSLKILLNPQSHKKEATQVYYEKVEPLLKLAGIKTDVTIMEYE 209
           W  Q  + L  F     K +  L    S  K+++Q+     +  +++ G+K+  T+ E+ 
Sbjct: 291 WKIQSGQCLRRFERAHSKGVTCL----SFSKDSSQILSASFDQTIRIHGLKSGKTLKEFR 346

Query: 210 GHALSLLKECELQGFDGVVCVGGDGS 235
           GH+  + +    Q    ++    DG+
Sbjct: 347 GHSSFVNEATFTQDGHYIISASSDGT 372


>gi|33598960 alpha-2B-adrenergic receptor [Homo sapiens]
          Length = 450

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 2/45 (4%)

Query: 14  EGGREEEAPPEAAAVPPALLTSPQQTEAAAERIL--LRGIFEIGR 56
           E   EEE  P+A  V PA   SP   +    R+L  LRG   +GR
Sbjct: 303 EEEEEEECEPQAVPVSPASACSPPLQQPQGSRVLATLRGQVLLGR 347


>gi|62243658 PI-3-kinase-related kinase SMG-1 [Homo sapiens]
          Length = 3661

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 11/36 (30%), Positives = 21/36 (58%)

Query: 183  TQVYYEKVEPLLKLAGIKTDVTIMEYEGHALSLLKE 218
            +++YY K+ P LK  G+  DV+  ++  H +  + E
Sbjct: 2250 SELYYSKIGPALKTVGLSLDVSRRDWPLHVMKAVLE 2285


>gi|11055976 carbohydrate (N-acetylglucosamine 6-O) sulfotransferase
           6 [Homo sapiens]
          Length = 395

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 8/69 (11%)

Query: 1   MPWRRRRNRVSALEGGREEEAPPEAAAVPPALLTSPQQTEAAAERILLRGIFEIGRDSC- 59
           +PWRR  + +      R   +PP  +A P   ++S    EA  + +  R  F + R++C 
Sbjct: 111 LPWRRNLSDLFQWAVSRALCSPPACSAFPRGAISS----EAVCKPLCARQSFTLAREACR 166

Query: 60  ---DVVLSE 65
               VVL E
Sbjct: 167 SYSHVVLKE 175


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.136    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,662,807
Number of Sequences: 37866
Number of extensions: 930597
Number of successful extensions: 2756
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 2725
Number of HSP's gapped (non-prelim): 30
length of query: 532
length of database: 18,247,518
effective HSP length: 107
effective length of query: 425
effective length of database: 14,195,856
effective search space: 6033238800
effective search space used: 6033238800
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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