Search of human proteins with 40254921

Search of human proteins with 40254921

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|40254921 transmembrane protein 144 [Homo sapiens]
         (345 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|40254921 transmembrane protein 144 [Homo sapiens]                  712   0.0  
gi|154937330 sodium-dependent glucose transporter 1 [Homo sapiens]     35   0.098
gi|46485465 Numb-interacting protein [Homo sapiens]                    33   0.49 
gi|169204521 PREDICTED: hypothetical protein [Homo sapiens]            31   1.4  
gi|169205149 PREDICTED: hypothetical protein [Homo sapiens]            31   1.4  
gi|169204400 PREDICTED: hypothetical protein [Homo sapiens]            31   1.4  
gi|51593090 mucin 13, epithelial transmembrane [Homo sapiens]          30   3.2  
gi|110618256 trace amine associated receptor 9 [Homo sapiens]          30   4.1  
gi|7669546 tachykinin receptor 1 isoform short [Homo sapiens]          29   7.0  
gi|4507343 tachykinin receptor 1 isoform long [Homo sapiens]           29   7.0  
gi|116812584 SID1 transmembrane family, member 1 [Homo sapiens]        28   9.2  
gi|149944526 additional sex combs like 3 [Homo sapiens]                28   9.2  
gi|122937259 solute carrier family 45, member 4 [Homo sapiens]         28   9.2  

>gi|40254921 transmembrane protein 144 [Homo sapiens]
          Length = 345

 Score =  712 bits (1837), Expect = 0.0
 Identities = 345/345 (100%), Positives = 345/345 (100%)

Query: 1   MSNNGADLTFGYISCFVAILLFGSNFVPLKKFDTGDGMFLQWVLCAAIWLVALVVNLILH 60
           MSNNGADLTFGYISCFVAILLFGSNFVPLKKFDTGDGMFLQWVLCAAIWLVALVVNLILH
Sbjct: 1   MSNNGADLTFGYISCFVAILLFGSNFVPLKKFDTGDGMFLQWVLCAAIWLVALVVNLILH 60

Query: 61  CPKFWPFAMLGGCIWATGNIAVVPIIKTIGLGLGILIWGSFNALTGWASSRFGWFGLDAE 120
           CPKFWPFAMLGGCIWATGNIAVVPIIKTIGLGLGILIWGSFNALTGWASSRFGWFGLDAE
Sbjct: 61  CPKFWPFAMLGGCIWATGNIAVVPIIKTIGLGLGILIWGSFNALTGWASSRFGWFGLDAE 120

Query: 121 EVSNPLLNYIGAGLSVVSAFIFLFIKSEIPNNTCSMDTTPLITEHVINTTQDPCSWVDKL 180
           EVSNPLLNYIGAGLSVVSAFIFLFIKSEIPNNTCSMDTTPLITEHVINTTQDPCSWVDKL
Sbjct: 121 EVSNPLLNYIGAGLSVVSAFIFLFIKSEIPNNTCSMDTTPLITEHVINTTQDPCSWVDKL 180

Query: 181 STVHHRIVGCSLAVISGVLYGSTFVPIIYIKDHSKRNDSIYAGASQYDLDYVFAHFSGIF 240
           STVHHRIVGCSLAVISGVLYGSTFVPIIYIKDHSKRNDSIYAGASQYDLDYVFAHFSGIF
Sbjct: 181 STVHHRIVGCSLAVISGVLYGSTFVPIIYIKDHSKRNDSIYAGASQYDLDYVFAHFSGIF 240

Query: 241 LTSTVYFLAYCIAMKNSPKLYPEAVLPGFLSGVLWAIATCCWFIANHSLSAVVSFPIITA 300
           LTSTVYFLAYCIAMKNSPKLYPEAVLPGFLSGVLWAIATCCWFIANHSLSAVVSFPIITA
Sbjct: 241 LTSTVYFLAYCIAMKNSPKLYPEAVLPGFLSGVLWAIATCCWFIANHSLSAVVSFPIITA 300

Query: 301 GPGFIAAMWGIFMFKEIKGLQNYLLMILAFCIILTGALCTAFSKI 345
           GPGFIAAMWGIFMFKEIKGLQNYLLMILAFCIILTGALCTAFSKI
Sbjct: 301 GPGFIAAMWGIFMFKEIKGLQNYLLMILAFCIILTGALCTAFSKI 345


>gi|154937330 sodium-dependent glucose transporter 1 [Homo sapiens]
          Length = 518

 Score = 35.0 bits (79), Expect = 0.098
 Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 20/120 (16%)

Query: 92  GLGILIWGSFNALTGWASSRFGWFGLDAEEVSNPLLNYIGAGLSVVSAFIFLFIKSEIPN 151
           GL  + WG+F A  G A     +F    +  +  +L+ IG+  S  S F+ LF K+ I  
Sbjct: 269 GLNSIFWGTFAACRGLAI----FFATCLQPGTMIVLSNIGSLTS--SLFLVLFDKNPI-- 320

Query: 152 NTCSMDTTPLITEHVINTTQDPCSWVDKLSTVHHR-----IVGCSLA-----VISGVLYG 201
             C    T +    +  T     SW+++ +T+H +     ++G SL       + G+L G
Sbjct: 321 --CLWIATSVYGASMATTFPSGVSWIEQYTTIHGKSAAFFVIGASLGEMAIPAVIGILQG 378


>gi|46485465 Numb-interacting protein [Homo sapiens]
          Length = 483

 Score = 32.7 bits (73), Expect = 0.49
 Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 10/120 (8%)

Query: 195 ISGVLYGSTFVPIIYIKDHSKRNDSI-YAGASQYDLDYVFAHFSGIFLTSTVYFLAYCIA 253
           + GV    T  P+  + +    N+   +     Y  +Y  A   G  L   V +LA    
Sbjct: 105 LGGVNITLTGTPVQQLNETINYNEEFTWRLGENYAEEYAKALEKG--LPDPVLYLAEKFT 162

Query: 254 MKNSPKLYPEAVLPG-FLSGVLWAIATCCWFIANHSLSAVVSFPIITAGPGFIAAMWGIF 312
            ++   LY +  L G + S +LW +A  CW +AN     ++S P++  G G++    GIF
Sbjct: 163 PRSPCGLYRQYRLAGHYTSAMLW-VAFLCWLLAN----VMLSMPVLVYG-GYMLLATGIF 216


>gi|169204521 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 430

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 9/47 (19%)

Query: 68  AMLGGCIWATGNIAVVPIIKTIGLGLGILIWGSFNALTGWASSRFGW 114
           A  GGC WAT  +AV   + +         WGS  AL G A+   GW
Sbjct: 85  AAAGGC-WATWEVAVAVTVSSR--------WGSGGALCGTAAGMLGW 122


>gi|169205149 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 430

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 9/47 (19%)

Query: 68  AMLGGCIWATGNIAVVPIIKTIGLGLGILIWGSFNALTGWASSRFGW 114
           A  GGC WAT  +AV   + +         WGS  AL G A+   GW
Sbjct: 85  AAAGGC-WATWEVAVAVTVSSR--------WGSGGALCGTAAGMLGW 122


>gi|169204400 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 430

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 9/47 (19%)

Query: 68  AMLGGCIWATGNIAVVPIIKTIGLGLGILIWGSFNALTGWASSRFGW 114
           A  GGC WAT  +AV   + +         WGS  AL G A+   GW
Sbjct: 85  AAAGGC-WATWEVAVAVTVSSR--------WGSGGALCGTAAGMLGW 122


>gi|51593090 mucin 13, epithelial transmembrane [Homo sapiens]
          Length = 511

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%)

Query: 112 FGWFGLDAEEVSNPLLNYIG--AGLSVVSAFIFLFIKSEIPNNTCSMDTTPLITEHVIN 168
           FG+ GLD ++    +L  +G  AG+ ++S  I L + +   N T  ++   LI E   N
Sbjct: 407 FGYSGLDCKDKFQLILTIVGTIAGIVILSMIIALIVTARSNNKTKHIEEENLIDEDFQN 465


>gi|110618256 trace amine associated receptor 9 [Homo sapiens]
          Length = 348

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 18/57 (31%), Positives = 26/57 (45%)

Query: 289 LSAVVSFPIITAGPGFIAAMWGIFMFKEIKGLQNYLLMILAFCIILTGALCTAFSKI 345
           L AV+ F  + A  G +  M  I  FK++    N+L+  LA    L G     FS +
Sbjct: 35  LYAVLGFGAVLAAFGNLLVMIAILHFKQLHTPTNFLIASLACADFLVGVTVMPFSTV 91


>gi|7669546 tachykinin receptor 1 isoform short [Homo sapiens]
          Length = 311

 Score = 28.9 bits (63), Expect = 7.0
 Identities = 13/41 (31%), Positives = 23/41 (56%)

Query: 290 SAVVSFPIITAGPGFIAAMWGIFMFKEIKGLQNYLLMILAF 330
           +A  +  ++T+  G +  MW I   K ++ + NY L+ LAF
Sbjct: 36  AAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAF 76


>gi|4507343 tachykinin receptor 1 isoform long [Homo sapiens]
          Length = 407

 Score = 28.9 bits (63), Expect = 7.0
 Identities = 13/41 (31%), Positives = 23/41 (56%)

Query: 290 SAVVSFPIITAGPGFIAAMWGIFMFKEIKGLQNYLLMILAF 330
           +A  +  ++T+  G +  MW I   K ++ + NY L+ LAF
Sbjct: 36  AAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAF 76


>gi|116812584 SID1 transmembrane family, member 1 [Homo sapiens]
          Length = 827

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 2/52 (3%)

Query: 234 AHFSGIFLTSTVYFLAYCIAMK--NSPKLYPEAVLPGFLSGVLWAIATCCWF 283
           ++  GIF+ + + +LA+ I MK  +S K+ P  +     + V+WA A   +F
Sbjct: 711 SYMLGIFICNLLLYLAFYIIMKLRSSEKVLPVPLFCIVATAVMWAAALYFFF 762


>gi|149944526 additional sex combs like 3 [Homo sapiens]
          Length = 2248

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 14/61 (22%), Positives = 31/61 (50%)

Query: 138  SAFIFLFIKSEIPNNTCSMDTTPLITEHVINTTQDPCSWVDKLSTVHHRIVGCSLAVISG 197
            S+   LF K+ +P + CS   +  I EH   ++ D  S +  + + +  I  C+++++  
Sbjct: 1225 SSVPMLFNKNSVPVSVCSTAISGAIKEHPFVSSVDKSSVLMSVDSANTTISACNISMLKT 1284

Query: 198  V 198
            +
Sbjct: 1285 I 1285


>gi|122937259 solute carrier family 45, member 4 [Homo sapiens]
          Length = 798

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 11/27 (40%), Positives = 18/27 (66%)

Query: 70  LGGCIWATGNIAVVPIIKTIGLGLGIL 96
           LGG + A G + V+P++ ++G  LG L
Sbjct: 631 LGGVVDAVGTVRVIPMVASVGSFLGFL 657


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.329    0.142    0.471 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,612,435
Number of Sequences: 37866
Number of extensions: 535956
Number of successful extensions: 1283
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1275
Number of HSP's gapped (non-prelim): 13
length of query: 345
length of database: 18,247,518
effective HSP length: 103
effective length of query: 242
effective length of database: 14,347,320
effective search space: 3472051440
effective search space used: 3472051440
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.