Guide to the Human Genome
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Name: KIAA0391 Sequence: fasta or formatted (583aa) NCBI GI: 62988276
Description:

mitochondrial RNase P protein 3

Referenced in:

RNases and RNA Stability

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8         28           2
 C cysteine            2.2         13           1
 D aspartate           6.0         35           2
 E glutamate           5.3         31           2
 F phenylalanine       4.8         28           2
 G glycine             5.1         30           2
 H histidine           2.7         16           1
 I isoleucine          5.1         30           2
 K lysine              7.9         46           2
 L leucine            11.5         67           4
 M methionine          2.1         12           1
 N asparagine          4.1         24           2
 P proline             3.9         23           2
 Q glutamine           5.5         32           2
 R arginine            5.7         33           2
 S serine              7.5         44           2
 T threonine           5.0         29           2
 V valine              5.1         30           2
 W tryptophan          2.1         12           1
 Y tyrosine            3.4         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitochondrial RNase P protein 3 
LOC100291612          0.007   PREDICTED: similar to protein-L-isoaspartate (D-asp...
LOC100290997          0.007   PREDICTED: hypothetical protein XP_002346467 
NR0B2                 0.005   short heterodimer partner 
CHI3L1                0.005   chitinase 3-like 1 
ZNF439                0.005   zinc finger protein 439 
PTCD3                 0.005   pentatricopeptide repeat domain 3 
KLRG1                 0.005   killer cell lectin-like receptor subfamily G, member...
LOC388559             0.004   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.004   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.004   PREDICTED: hypothetical protein LOC388559 
LEMD3                 0.004   LEM domain containing 3 
PTCD1                 0.004   pentatricopeptide repeat domain 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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