BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|38570064 hypothetical protein LOC136895 [Homo sapiens] (590 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|38570064 hypothetical protein LOC136895 [Homo sapiens] 1257 0.0 gi|66472382 nischarin [Homo sapiens] 34 0.33 gi|239582755 myosin IG [Homo sapiens] 33 0.56 gi|22749187 putative adenylate kinase-like protein C9orf98 [Homo... 33 0.96 gi|239749395 PREDICTED: p150-like [Homo sapiens] 32 1.6 gi|30425368 parathyroid hormone 2 preproprotein [Homo sapiens] 32 2.1 gi|239754856 PREDICTED: p150-like [Homo sapiens] 31 2.8 gi|239754376 PREDICTED: similar to putative p150 [Homo sapiens] 31 2.8 gi|239748989 PREDICTED: hypothetical protein XP_002346845 [Homo ... 31 2.8 gi|239743530 PREDICTED: p150-like [Homo sapiens] 31 2.8 gi|239743009 PREDICTED: hypothetical protein XP_002342695 [Homo ... 31 2.8 gi|239752486 PREDICTED: hypothetical protein XP_002347335 [Homo ... 31 3.6 gi|7657530 rhabdoid tumor deletion region protein 1 [Homo sapiens] 31 3.6 gi|62240989 carbonic anhydrase VII isoform 2 [Homo sapiens] 30 6.2 gi|4885101 carbonic anhydrase VII isoform 1 [Homo sapiens] 30 6.2 gi|62988361 absent in melanoma 1 [Homo sapiens] 30 6.2 gi|23110925 proteasome beta 6 subunit [Homo sapiens] 30 6.2 gi|22749279 zinc finger protein 366 [Homo sapiens] 30 8.1 gi|40807475 PML-RARA regulated adaptor molecule 1 [Homo sapiens] 30 8.1 gi|197333879 genetic suppressor element 1 isoform 2 [Homo sapiens] 30 8.1 gi|44955926 genetic suppressor element 1 isoform 1 [Homo sapiens] 30 8.1 >gi|38570064 hypothetical protein LOC136895 [Homo sapiens] Length = 590 Score = 1257 bits (3252), Expect = 0.0 Identities = 590/590 (100%), Positives = 590/590 (100%) Query: 1 MEVIHGRPYCCRELEGADILSNTFYSNELHNPLQTVTRPTASEDRYQELRESLQQCRLPW 60 MEVIHGRPYCCRELEGADILSNTFYSNELHNPLQTVTRPTASEDRYQELRESLQQCRLPW Sbjct: 1 MEVIHGRPYCCRELEGADILSNTFYSNELHNPLQTVTRPTASEDRYQELRESLQQCRLPW 60 Query: 61 GAEREYGGIIPISLPEDHRPKYEPPRVMGKGHQHYGFGGETWPRKLPVEQFYYLTQNKKS 120 GAEREYGGIIPISLPEDHRPKYEPPRVMGKGHQHYGFGGETWPRKLPVEQFYYLTQNKKS Sbjct: 61 GAEREYGGIIPISLPEDHRPKYEPPRVMGKGHQHYGFGGETWPRKLPVEQFYYLTQNKKS 120 Query: 121 DVYGNDSLIPKPPNSTVGEICLPYPIEHPYHTHICRGAMFPTFTSPEDLYTGIKARTQQP 180 DVYGNDSLIPKPPNSTVGEICLPYPIEHPYHTHICRGAMFPTFTSPEDLYTGIKARTQQP Sbjct: 121 DVYGNDSLIPKPPNSTVGEICLPYPIEHPYHTHICRGAMFPTFTSPEDLYTGIKARTQQP 180 Query: 181 FPPTVPTKAYDSTVLKTRGNPYRYELIDIPMDSKKKALTWPGQGVYYDFPRGVEKNKPVF 240 FPPTVPTKAYDSTVLKTRGNPYRYELIDIPMDSKKKALTWPGQGVYYDFPRGVEKNKPVF Sbjct: 181 FPPTVPTKAYDSTVLKTRGNPYRYELIDIPMDSKKKALTWPGQGVYYDFPRGVEKNKPVF 240 Query: 241 YPKPPKTFAPNTSLNSWDPICSAKEANIQRNLERSHWLTSYTHDFTGLGPMDPLELDDYH 300 YPKPPKTFAPNTSLNSWDPICSAKEANIQRNLERSHWLTSYTHDFTGLGPMDPLELDDYH Sbjct: 241 YPKPPKTFAPNTSLNSWDPICSAKEANIQRNLERSHWLTSYTHDFTGLGPMDPLELDDYH 300 Query: 301 EKMVAELTRKIGFDPEPQEKFHPVFKPPRPLEGRIARLIQNRRSLEAIVQQRPRSCPDCT 360 EKMVAELTRKIGFDPEPQEKFHPVFKPPRPLEGRIARLIQNRRSLEAIVQQRPRSCPDCT Sbjct: 301 EKMVAELTRKIGFDPEPQEKFHPVFKPPRPLEGRIARLIQNRRSLEAIVQQRPRSCPDCT 360 Query: 361 PRVLCNFHTFVPSSKEMVALSDNIPAGVTHKNQDIEEKIIEEQSLLSTYELPSCYPTKDL 420 PRVLCNFHTFVPSSKEMVALSDNIPAGVTHKNQDIEEKIIEEQSLLSTYELPSCYPTKDL Sbjct: 361 PRVLCNFHTFVPSSKEMVALSDNIPAGVTHKNQDIEEKIIEEQSLLSTYELPSCYPTKDL 420 Query: 421 TSIYDIKPFPKITDTKKTEDLYWRQQSLKTQPTPYCKPDHWIHYENLKSPLRDQYNMCPD 480 TSIYDIKPFPKITDTKKTEDLYWRQQSLKTQPTPYCKPDHWIHYENLKSPLRDQYNMCPD Sbjct: 421 TSIYDIKPFPKITDTKKTEDLYWRQQSLKTQPTPYCKPDHWIHYENLKSPLRDQYNMCPD 480 Query: 481 PVSLSKPSVLQNKQDTEAFTLEHFLSKPEEELFLNMENNEETRPVLGWIPRAGVTKPQTN 540 PVSLSKPSVLQNKQDTEAFTLEHFLSKPEEELFLNMENNEETRPVLGWIPRAGVTKPQTN Sbjct: 481 PVSLSKPSVLQNKQDTEAFTLEHFLSKPEEELFLNMENNEETRPVLGWIPRAGVTKPQTN 540 Query: 541 LLELKNSFSKTGAQKRFHKSILEDHKDLRDNEHSGMKHQFYGHNSYYFYN 590 LLELKNSFSKTGAQKRFHKSILEDHKDLRDNEHSGMKHQFYGHNSYYFYN Sbjct: 541 LLELKNSFSKTGAQKRFHKSILEDHKDLRDNEHSGMKHQFYGHNSYYFYN 590 >gi|66472382 nischarin [Homo sapiens] Length = 1504 Score = 34.3 bits (77), Expect = 0.33 Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 14/78 (17%) Query: 295 ELDDYHEKMVAELTRKIGFDPEPQEKFHPVFKPPRPLEGRIARLIQNRRS--LEAIVQQR 352 + D HEK+VAE K PP+ + G+ +R + +R LE +Q+ Sbjct: 52 DFHDLHEKLVAE------------RKIDKNLLPPKKIIGKNSRSLVEKREKDLEVYLQKL 99 Query: 353 PRSCPDCTPRVLCNFHTF 370 + P TPRVL +F F Sbjct: 100 LAAFPGVTPRVLAHFLHF 117 >gi|239582755 myosin IG [Homo sapiens] Length = 1018 Score = 33.5 bits (75), Expect = 0.56 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%) Query: 271 NLERSHWLTSYTHDFTGLGPM--DPLELDDYHEKMVAELTRKIGFDPEPQEKFHPV 324 +LER+ + ++TH GL L+ D+ + V E R IGF PE E H + Sbjct: 220 HLERNPAVYNFTHQGAGLNMTVHSALDSDEQSHQAVTEAMRVIGFSPEEVESVHRI 275 >gi|22749187 putative adenylate kinase-like protein C9orf98 [Homo sapiens] Length = 479 Score = 32.7 bits (73), Expect = 0.96 Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 7/83 (8%) Query: 268 IQRNLERSHWLTSYTHDFTGLGPMDPLELDDYHEKMVAELTRKIGFDPEPQEKFHPVFKP 327 + R+L+++H L G P L+ + ++ LT + DP E++H ++KP Sbjct: 355 VPRDLDQAHLLNRL-----GYNPNRVFFLNVPFDSIMERLTLR-RIDPVTGERYHLMYKP 408 Query: 328 PRPLEGRIARLIQNRRSLEAIVQ 350 P +E + ARL+QN + E V+ Sbjct: 409 PPTMEIQ-ARLLQNPKDAEEQVK 430 >gi|239749395 PREDICTED: p150-like [Homo sapiens] Length = 262 Score = 32.0 bits (71), Expect = 1.6 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 5/43 (11%) Query: 240 FYPKPPKTFAPNTSLNSWDPI-----CSAKEANIQRNLERSHW 277 F K PK A ++ WD I C+AKE I+ N + + W Sbjct: 182 FMSKTPKAMATKAKIDKWDQIKLKSFCTAKETTIRVNRQPTKW 224 >gi|30425368 parathyroid hormone 2 preproprotein [Homo sapiens] Length = 100 Score = 31.6 bits (70), Expect = 2.1 Identities = 16/39 (41%), Positives = 18/39 (46%) Query: 245 PKTFAPNTSLNSWDPICSAKEANIQRNLERSHWLTSYTH 283 P T P SL D + A + LER HWL SY H Sbjct: 54 PATPRPRRSLALADDAAFRERARLLAALERRHWLNSYMH 92 >gi|239754856 PREDICTED: p150-like [Homo sapiens] Length = 262 Score = 31.2 bits (69), Expect = 2.8 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 5/43 (11%) Query: 240 FYPKPPKTFAPNTSLNSWDPI-----CSAKEANIQRNLERSHW 277 F K PK A ++ WD I C+AKE I+ N + + W Sbjct: 182 FMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKW 224 >gi|239754376 PREDICTED: similar to putative p150 [Homo sapiens] Length = 295 Score = 31.2 bits (69), Expect = 2.8 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 5/43 (11%) Query: 240 FYPKPPKTFAPNTSLNSWDPI-----CSAKEANIQRNLERSHW 277 F K PK A ++ WD I C+AKE I+ N + + W Sbjct: 124 FMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKW 166 >gi|239748989 PREDICTED: hypothetical protein XP_002346845 [Homo sapiens] Length = 295 Score = 31.2 bits (69), Expect = 2.8 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 5/43 (11%) Query: 240 FYPKPPKTFAPNTSLNSWDPI-----CSAKEANIQRNLERSHW 277 F K PK A ++ WD I C+AKE I+ N + + W Sbjct: 124 FMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKW 166 >gi|239743530 PREDICTED: p150-like [Homo sapiens] Length = 262 Score = 31.2 bits (69), Expect = 2.8 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 5/43 (11%) Query: 240 FYPKPPKTFAPNTSLNSWDPI-----CSAKEANIQRNLERSHW 277 F K PK A ++ WD I C+AKE I+ N + + W Sbjct: 182 FMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKW 224 >gi|239743009 PREDICTED: hypothetical protein XP_002342695 [Homo sapiens] Length = 295 Score = 31.2 bits (69), Expect = 2.8 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 5/43 (11%) Query: 240 FYPKPPKTFAPNTSLNSWDPI-----CSAKEANIQRNLERSHW 277 F K PK A ++ WD I C+AKE I+ N + + W Sbjct: 124 FMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKW 166 >gi|239752486 PREDICTED: hypothetical protein XP_002347335 [Homo sapiens] Length = 137 Score = 30.8 bits (68), Expect = 3.6 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 5/43 (11%) Query: 240 FYPKPPKTFAPNTSLNSWD-----PICSAKEANIQRNLERSHW 277 F + PK A T + WD ICSAK+ I+ N + + W Sbjct: 5 FITRTPKAMATETKIYKWDLTKLKSICSAKDTIIRVNRQPTEW 47 >gi|7657530 rhabdoid tumor deletion region protein 1 [Homo sapiens] Length = 348 Score = 30.8 bits (68), Expect = 3.6 Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 6/77 (7%) Query: 407 STYELPSCYPTKDLTSIYDIKPFPKITDTKKTEDLYWRQQSLKT------QPTPYCKPDH 460 ++ ELP +T+ Y + PK+ + ++EDL RQ++L P K + Sbjct: 6 NSLELPININATQITTAYGHRALPKLKEELQSEDLQTRQKALMALCDLMHDPECIYKAMN 65 Query: 461 WIHYENLKSPLRDQYNM 477 ENLK+ L+D +M Sbjct: 66 IGCMENLKALLKDSNSM 82 >gi|62240989 carbonic anhydrase VII isoform 2 [Homo sapiens] Length = 208 Score = 30.0 bits (66), Expect = 6.2 Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 2/31 (6%) Query: 309 RKIGFDPEPQEKFHPV--FKPPRPLEGRIAR 337 R + F E E+ H V F+PP+PL+GR+ + Sbjct: 173 RSLLFTSEDDERIHMVNNFRPPQPLKGRVVK 203 >gi|4885101 carbonic anhydrase VII isoform 1 [Homo sapiens] Length = 264 Score = 30.0 bits (66), Expect = 6.2 Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 2/31 (6%) Query: 309 RKIGFDPEPQEKFHPV--FKPPRPLEGRIAR 337 R + F E E+ H V F+PP+PL+GR+ + Sbjct: 229 RSLLFTSEDDERIHMVNNFRPPQPLKGRVVK 259 >gi|62988361 absent in melanoma 1 [Homo sapiens] Length = 1723 Score = 30.0 bits (66), Expect = 6.2 Identities = 47/205 (22%), Positives = 77/205 (37%), Gaps = 41/205 (20%) Query: 228 DFPRGVEKNK--PVFYPKPPKTFAPNTSLNSWDPICSAK-EANIQRNLERSHWLTSYTHD 284 D P V+ P PKP TF+ + S P S A ++ + + S Sbjct: 429 DIPTTVDTKDLPPTAMPKPQHTFSDSQSPAESSPGPSLSLSAPAPGDVPKDTCVQSPISS 488 Query: 285 FTGLGPMDPLELDDYHEKMVAELTRKIGFDPEPQEKFHPVFKPPRPLEGRIARLIQNRRS 344 F P L++ + H+ V ++R + EK P L G + RS Sbjct: 489 F----PCTDLKVSENHKGCVLPVSR------QNNEKM-----PLLELGGETTPPLSTERS 533 Query: 345 LEAIVQQRPRSCPDCTPRVLCNFHTFVPSSKEMVALSDNIPAGVTHKNQDIEEKIIEEQS 404 EA+ + C RVL +FV +P T QD+ ++I E S Sbjct: 534 PEAVGSE-------CPSRVLVQVRSFV------------LPVEST---QDVSSQVIPESS 571 Query: 405 LLSTYELPSCYPTK-DLTSIYDIKP 428 + +LP+C+ + ++ S+ P Sbjct: 572 EVREVQLPTCHSNEPEVVSVASCAP 596 >gi|23110925 proteasome beta 6 subunit [Homo sapiens] Length = 239 Score = 30.0 bits (66), Expect = 6.2 Identities = 30/123 (24%), Positives = 49/123 (39%), Gaps = 10/123 (8%) Query: 4 IHGRPYCCRELEGADILSNT--------FYSNELHNPLQTVTRPTASEDRYQELRESLQQ 55 IH R +CCR AD + F+S EL+ P T + ++ RE L Sbjct: 71 IHDRIFCCRSGSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMA 130 Query: 56 CRLPWGAEREYGGIIPISLPEDHRPKYEPPRVMGKGHQH-YGFGGETWPRKLPVEQFYYL 114 + G + + GG + S+P + + G G + YG+ T+ + E+ Sbjct: 131 GIIIAGWDPQEGGQV-YSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQF 189 Query: 115 TQN 117 T N Sbjct: 190 TAN 192 >gi|22749279 zinc finger protein 366 [Homo sapiens] Length = 744 Score = 29.6 bits (65), Expect = 8.1 Identities = 37/128 (28%), Positives = 55/128 (42%), Gaps = 30/128 (23%) Query: 70 IPISLPEDHRPKYEPPRV--MGKGHQHYG----FGGETWPRKLPVEQFYYLTQNKKSDVY 123 +P+ P+ RPKY+ + G Q Y FGG+ PV+Q K S V+ Sbjct: 112 LPLLFPQPPRPKYDSQMIDLCNVGFQFYRSLEHFGGK------PVKQ----EPIKPSAVW 161 Query: 124 GNDSLIPKPPNSTVGEICLPYPIEHPYHTHICRGAMFPTF--TSPEDLYTGIKARTQQPF 181 P+P + LP P +PY+ + G MFP F +S ++ +QP Sbjct: 162 ------PQPTPTPF----LPTP--YPYYPKVHPGLMFPFFVPSSSPFPFSRHTFLPKQPP 209 Query: 182 PPTVPTKA 189 P +P KA Sbjct: 210 EPLLPRKA 217 >gi|40807475 PML-RARA regulated adaptor molecule 1 [Homo sapiens] Length = 669 Score = 29.6 bits (65), Expect = 8.1 Identities = 38/155 (24%), Positives = 55/155 (35%), Gaps = 28/155 (18%) Query: 410 ELPSCYPTKDLTSIYDIKPFPKITDTKK------TEDLYWRQQSLKTQPTPYCKPDHWIH 463 +LP P ++T + P P++TD K DL + L P P Sbjct: 90 DLPKKPPPPEVTDLPKKPPPPEVTDLPKKPSKLELSDLSKKFPQLGATPFP--------- 140 Query: 464 YENLKSPLRDQYNMCPDPVSLSKPSVLQNKQDTEAFTLEHFLSKPEEELFLNMENNEETR 523 + PL+ + P SL +P K + L H P E Sbjct: 141 ----RKPLQPEVGEAPLKASLPEPGAPARK-PLQPDELSHPARPPSEP-------KSGAF 188 Query: 524 PVLGWIPRAGVTKPQTNLLELKNSFSKTGAQKRFH 558 P W P AG P++ EL ++F K AQ F+ Sbjct: 189 PRKLWQPEAGEATPRSPQPEL-STFPKKPAQPEFN 222 >gi|197333879 genetic suppressor element 1 isoform 2 [Homo sapiens] Length = 1113 Score = 29.6 bits (65), Expect = 8.1 Identities = 51/188 (27%), Positives = 72/188 (38%), Gaps = 38/188 (20%) Query: 183 PTVPTKAYDSTVLKTRGNPYRYELIDIPMDSKKKALTWPGQGVYYDFPRGVEKNKPVFYP 242 P VP +A TR P R+E PG D P+ P+ P Sbjct: 428 PPVPAEAEHRPESTTRPGPNRHE---------------PGGR---DPPQHFGGPPPLISP 469 Query: 243 KPPKTFAPNTSLNSWDPICSAKEANIQRNLERSHWLTSYTHDFT----GLGPMDPLELDD 298 KP AP T+L W+P+ S + ++ SH L S+ F P+ +E Sbjct: 470 KPQLHAAP-TAL--WNPV-SLMDNTLETRRAESHSLHSHPAAFEPSRQAAVPLVKVERVF 525 Query: 299 YHEKMVAELTRKIGFDPEPQEKFHPVFKPPRP---------LEGRIARLIQNRRSLEAIV 349 EK E RK +P P +K+ P PPR L G L + +S + I+ Sbjct: 526 CPEK-AEEGPRKR--EPAPLDKYQPPPPPPREGGSLEHQPFLPGPGPFLAELEKSTQTIL 582 Query: 350 QQRPRSCP 357 Q+ S P Sbjct: 583 GQQRASLP 590 >gi|44955926 genetic suppressor element 1 isoform 1 [Homo sapiens] Length = 1217 Score = 29.6 bits (65), Expect = 8.1 Identities = 51/188 (27%), Positives = 72/188 (38%), Gaps = 38/188 (20%) Query: 183 PTVPTKAYDSTVLKTRGNPYRYELIDIPMDSKKKALTWPGQGVYYDFPRGVEKNKPVFYP 242 P VP +A TR P R+E PG D P+ P+ P Sbjct: 532 PPVPAEAEHRPESTTRPGPNRHE---------------PGGR---DPPQHFGGPPPLISP 573 Query: 243 KPPKTFAPNTSLNSWDPICSAKEANIQRNLERSHWLTSYTHDFT----GLGPMDPLELDD 298 KP AP T+L W+P+ S + ++ SH L S+ F P+ +E Sbjct: 574 KPQLHAAP-TAL--WNPV-SLMDNTLETRRAESHSLHSHPAAFEPSRQAAVPLVKVERVF 629 Query: 299 YHEKMVAELTRKIGFDPEPQEKFHPVFKPPRP---------LEGRIARLIQNRRSLEAIV 349 EK E RK +P P +K+ P PPR L G L + +S + I+ Sbjct: 630 CPEK-AEEGPRKR--EPAPLDKYQPPPPPPREGGSLEHQPFLPGPGPFLAELEKSTQTIL 686 Query: 350 QQRPRSCP 357 Q+ S P Sbjct: 687 GQQRASLP 694 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.317 0.136 0.428 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 27,926,224 Number of Sequences: 37866 Number of extensions: 1494793 Number of successful extensions: 3349 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 2 Number of HSP's successfully gapped in prelim test: 19 Number of HSP's that attempted gapping in prelim test: 3337 Number of HSP's gapped (non-prelim): 25 length of query: 590 length of database: 18,247,518 effective HSP length: 108 effective length of query: 482 effective length of database: 14,157,990 effective search space: 6824151180 effective search space used: 6824151180 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.