Guide to the Human Genome
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Search of human proteins with 38570064

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|38570064 hypothetical protein LOC136895 [Homo sapiens]
         (590 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|38570064 hypothetical protein LOC136895 [Homo sapiens]            1257   0.0  
gi|66472382 nischarin [Homo sapiens]                                   34   0.33 
gi|239582755 myosin IG [Homo sapiens]                                  33   0.56 
gi|22749187 putative adenylate kinase-like protein C9orf98 [Homo...    33   0.96 
gi|239749395 PREDICTED: p150-like [Homo sapiens]                       32   1.6  
gi|30425368 parathyroid hormone 2 preproprotein [Homo sapiens]         32   2.1  
gi|239754856 PREDICTED: p150-like [Homo sapiens]                       31   2.8  
gi|239754376 PREDICTED: similar to putative p150 [Homo sapiens]        31   2.8  
gi|239748989 PREDICTED: hypothetical protein XP_002346845 [Homo ...    31   2.8  
gi|239743530 PREDICTED: p150-like [Homo sapiens]                       31   2.8  
gi|239743009 PREDICTED: hypothetical protein XP_002342695 [Homo ...    31   2.8  
gi|239752486 PREDICTED: hypothetical protein XP_002347335 [Homo ...    31   3.6  
gi|7657530 rhabdoid tumor deletion region protein 1 [Homo sapiens]     31   3.6  
gi|62240989 carbonic anhydrase VII isoform 2 [Homo sapiens]            30   6.2  
gi|4885101 carbonic anhydrase VII isoform 1 [Homo sapiens]             30   6.2  
gi|62988361 absent in melanoma 1 [Homo sapiens]                        30   6.2  
gi|23110925 proteasome beta 6 subunit [Homo sapiens]                   30   6.2  
gi|22749279 zinc finger protein 366 [Homo sapiens]                     30   8.1  
gi|40807475 PML-RARA regulated adaptor molecule 1 [Homo sapiens]       30   8.1  
gi|197333879 genetic suppressor element 1 isoform 2 [Homo sapiens]     30   8.1  
gi|44955926 genetic suppressor element 1 isoform 1 [Homo sapiens]      30   8.1  

>gi|38570064 hypothetical protein LOC136895 [Homo sapiens]
          Length = 590

 Score = 1257 bits (3252), Expect = 0.0
 Identities = 590/590 (100%), Positives = 590/590 (100%)

Query: 1   MEVIHGRPYCCRELEGADILSNTFYSNELHNPLQTVTRPTASEDRYQELRESLQQCRLPW 60
           MEVIHGRPYCCRELEGADILSNTFYSNELHNPLQTVTRPTASEDRYQELRESLQQCRLPW
Sbjct: 1   MEVIHGRPYCCRELEGADILSNTFYSNELHNPLQTVTRPTASEDRYQELRESLQQCRLPW 60

Query: 61  GAEREYGGIIPISLPEDHRPKYEPPRVMGKGHQHYGFGGETWPRKLPVEQFYYLTQNKKS 120
           GAEREYGGIIPISLPEDHRPKYEPPRVMGKGHQHYGFGGETWPRKLPVEQFYYLTQNKKS
Sbjct: 61  GAEREYGGIIPISLPEDHRPKYEPPRVMGKGHQHYGFGGETWPRKLPVEQFYYLTQNKKS 120

Query: 121 DVYGNDSLIPKPPNSTVGEICLPYPIEHPYHTHICRGAMFPTFTSPEDLYTGIKARTQQP 180
           DVYGNDSLIPKPPNSTVGEICLPYPIEHPYHTHICRGAMFPTFTSPEDLYTGIKARTQQP
Sbjct: 121 DVYGNDSLIPKPPNSTVGEICLPYPIEHPYHTHICRGAMFPTFTSPEDLYTGIKARTQQP 180

Query: 181 FPPTVPTKAYDSTVLKTRGNPYRYELIDIPMDSKKKALTWPGQGVYYDFPRGVEKNKPVF 240
           FPPTVPTKAYDSTVLKTRGNPYRYELIDIPMDSKKKALTWPGQGVYYDFPRGVEKNKPVF
Sbjct: 181 FPPTVPTKAYDSTVLKTRGNPYRYELIDIPMDSKKKALTWPGQGVYYDFPRGVEKNKPVF 240

Query: 241 YPKPPKTFAPNTSLNSWDPICSAKEANIQRNLERSHWLTSYTHDFTGLGPMDPLELDDYH 300
           YPKPPKTFAPNTSLNSWDPICSAKEANIQRNLERSHWLTSYTHDFTGLGPMDPLELDDYH
Sbjct: 241 YPKPPKTFAPNTSLNSWDPICSAKEANIQRNLERSHWLTSYTHDFTGLGPMDPLELDDYH 300

Query: 301 EKMVAELTRKIGFDPEPQEKFHPVFKPPRPLEGRIARLIQNRRSLEAIVQQRPRSCPDCT 360
           EKMVAELTRKIGFDPEPQEKFHPVFKPPRPLEGRIARLIQNRRSLEAIVQQRPRSCPDCT
Sbjct: 301 EKMVAELTRKIGFDPEPQEKFHPVFKPPRPLEGRIARLIQNRRSLEAIVQQRPRSCPDCT 360

Query: 361 PRVLCNFHTFVPSSKEMVALSDNIPAGVTHKNQDIEEKIIEEQSLLSTYELPSCYPTKDL 420
           PRVLCNFHTFVPSSKEMVALSDNIPAGVTHKNQDIEEKIIEEQSLLSTYELPSCYPTKDL
Sbjct: 361 PRVLCNFHTFVPSSKEMVALSDNIPAGVTHKNQDIEEKIIEEQSLLSTYELPSCYPTKDL 420

Query: 421 TSIYDIKPFPKITDTKKTEDLYWRQQSLKTQPTPYCKPDHWIHYENLKSPLRDQYNMCPD 480
           TSIYDIKPFPKITDTKKTEDLYWRQQSLKTQPTPYCKPDHWIHYENLKSPLRDQYNMCPD
Sbjct: 421 TSIYDIKPFPKITDTKKTEDLYWRQQSLKTQPTPYCKPDHWIHYENLKSPLRDQYNMCPD 480

Query: 481 PVSLSKPSVLQNKQDTEAFTLEHFLSKPEEELFLNMENNEETRPVLGWIPRAGVTKPQTN 540
           PVSLSKPSVLQNKQDTEAFTLEHFLSKPEEELFLNMENNEETRPVLGWIPRAGVTKPQTN
Sbjct: 481 PVSLSKPSVLQNKQDTEAFTLEHFLSKPEEELFLNMENNEETRPVLGWIPRAGVTKPQTN 540

Query: 541 LLELKNSFSKTGAQKRFHKSILEDHKDLRDNEHSGMKHQFYGHNSYYFYN 590
           LLELKNSFSKTGAQKRFHKSILEDHKDLRDNEHSGMKHQFYGHNSYYFYN
Sbjct: 541 LLELKNSFSKTGAQKRFHKSILEDHKDLRDNEHSGMKHQFYGHNSYYFYN 590


>gi|66472382 nischarin [Homo sapiens]
          Length = 1504

 Score = 34.3 bits (77), Expect = 0.33
 Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 14/78 (17%)

Query: 295 ELDDYHEKMVAELTRKIGFDPEPQEKFHPVFKPPRPLEGRIARLIQNRRS--LEAIVQQR 352
           +  D HEK+VAE             K      PP+ + G+ +R +  +R   LE  +Q+ 
Sbjct: 52  DFHDLHEKLVAE------------RKIDKNLLPPKKIIGKNSRSLVEKREKDLEVYLQKL 99

Query: 353 PRSCPDCTPRVLCNFHTF 370
             + P  TPRVL +F  F
Sbjct: 100 LAAFPGVTPRVLAHFLHF 117


>gi|239582755 myosin IG [Homo sapiens]
          Length = 1018

 Score = 33.5 bits (75), Expect = 0.56
 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)

Query: 271 NLERSHWLTSYTHDFTGLGPM--DPLELDDYHEKMVAELTRKIGFDPEPQEKFHPV 324
           +LER+  + ++TH   GL       L+ D+   + V E  R IGF PE  E  H +
Sbjct: 220 HLERNPAVYNFTHQGAGLNMTVHSALDSDEQSHQAVTEAMRVIGFSPEEVESVHRI 275


>gi|22749187 putative adenylate kinase-like protein C9orf98 [Homo
           sapiens]
          Length = 479

 Score = 32.7 bits (73), Expect = 0.96
 Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 7/83 (8%)

Query: 268 IQRNLERSHWLTSYTHDFTGLGPMDPLELDDYHEKMVAELTRKIGFDPEPQEKFHPVFKP 327
           + R+L+++H L        G  P     L+   + ++  LT +   DP   E++H ++KP
Sbjct: 355 VPRDLDQAHLLNRL-----GYNPNRVFFLNVPFDSIMERLTLR-RIDPVTGERYHLMYKP 408

Query: 328 PRPLEGRIARLIQNRRSLEAIVQ 350
           P  +E + ARL+QN +  E  V+
Sbjct: 409 PPTMEIQ-ARLLQNPKDAEEQVK 430


>gi|239749395 PREDICTED: p150-like [Homo sapiens]
          Length = 262

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 5/43 (11%)

Query: 240 FYPKPPKTFAPNTSLNSWDPI-----CSAKEANIQRNLERSHW 277
           F  K PK  A    ++ WD I     C+AKE  I+ N + + W
Sbjct: 182 FMSKTPKAMATKAKIDKWDQIKLKSFCTAKETTIRVNRQPTKW 224


>gi|30425368 parathyroid hormone 2 preproprotein [Homo sapiens]
          Length = 100

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 16/39 (41%), Positives = 18/39 (46%)

Query: 245 PKTFAPNTSLNSWDPICSAKEANIQRNLERSHWLTSYTH 283
           P T  P  SL   D     + A +   LER HWL SY H
Sbjct: 54  PATPRPRRSLALADDAAFRERARLLAALERRHWLNSYMH 92


>gi|239754856 PREDICTED: p150-like [Homo sapiens]
          Length = 262

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 5/43 (11%)

Query: 240 FYPKPPKTFAPNTSLNSWDPI-----CSAKEANIQRNLERSHW 277
           F  K PK  A    ++ WD I     C+AKE  I+ N + + W
Sbjct: 182 FMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKW 224


>gi|239754376 PREDICTED: similar to putative p150 [Homo sapiens]
          Length = 295

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 5/43 (11%)

Query: 240 FYPKPPKTFAPNTSLNSWDPI-----CSAKEANIQRNLERSHW 277
           F  K PK  A    ++ WD I     C+AKE  I+ N + + W
Sbjct: 124 FMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKW 166


>gi|239748989 PREDICTED: hypothetical protein XP_002346845 [Homo
           sapiens]
          Length = 295

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 5/43 (11%)

Query: 240 FYPKPPKTFAPNTSLNSWDPI-----CSAKEANIQRNLERSHW 277
           F  K PK  A    ++ WD I     C+AKE  I+ N + + W
Sbjct: 124 FMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKW 166


>gi|239743530 PREDICTED: p150-like [Homo sapiens]
          Length = 262

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 5/43 (11%)

Query: 240 FYPKPPKTFAPNTSLNSWDPI-----CSAKEANIQRNLERSHW 277
           F  K PK  A    ++ WD I     C+AKE  I+ N + + W
Sbjct: 182 FMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKW 224


>gi|239743009 PREDICTED: hypothetical protein XP_002342695 [Homo
           sapiens]
          Length = 295

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 5/43 (11%)

Query: 240 FYPKPPKTFAPNTSLNSWDPI-----CSAKEANIQRNLERSHW 277
           F  K PK  A    ++ WD I     C+AKE  I+ N + + W
Sbjct: 124 FMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKW 166


>gi|239752486 PREDICTED: hypothetical protein XP_002347335 [Homo
           sapiens]
          Length = 137

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 5/43 (11%)

Query: 240 FYPKPPKTFAPNTSLNSWD-----PICSAKEANIQRNLERSHW 277
           F  + PK  A  T +  WD      ICSAK+  I+ N + + W
Sbjct: 5   FITRTPKAMATETKIYKWDLTKLKSICSAKDTIIRVNRQPTEW 47


>gi|7657530 rhabdoid tumor deletion region protein 1 [Homo sapiens]
          Length = 348

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 6/77 (7%)

Query: 407 STYELPSCYPTKDLTSIYDIKPFPKITDTKKTEDLYWRQQSLKT------QPTPYCKPDH 460
           ++ ELP       +T+ Y  +  PK+ +  ++EDL  RQ++L         P    K  +
Sbjct: 6   NSLELPININATQITTAYGHRALPKLKEELQSEDLQTRQKALMALCDLMHDPECIYKAMN 65

Query: 461 WIHYENLKSPLRDQYNM 477
               ENLK+ L+D  +M
Sbjct: 66  IGCMENLKALLKDSNSM 82


>gi|62240989 carbonic anhydrase VII isoform 2 [Homo sapiens]
          Length = 208

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 2/31 (6%)

Query: 309 RKIGFDPEPQEKFHPV--FKPPRPLEGRIAR 337
           R + F  E  E+ H V  F+PP+PL+GR+ +
Sbjct: 173 RSLLFTSEDDERIHMVNNFRPPQPLKGRVVK 203


>gi|4885101 carbonic anhydrase VII isoform 1 [Homo sapiens]
          Length = 264

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 2/31 (6%)

Query: 309 RKIGFDPEPQEKFHPV--FKPPRPLEGRIAR 337
           R + F  E  E+ H V  F+PP+PL+GR+ +
Sbjct: 229 RSLLFTSEDDERIHMVNNFRPPQPLKGRVVK 259


>gi|62988361 absent in melanoma 1 [Homo sapiens]
          Length = 1723

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 47/205 (22%), Positives = 77/205 (37%), Gaps = 41/205 (20%)

Query: 228 DFPRGVEKNK--PVFYPKPPKTFAPNTSLNSWDPICSAK-EANIQRNLERSHWLTSYTHD 284
           D P  V+     P   PKP  TF+ + S     P  S    A    ++ +   + S    
Sbjct: 429 DIPTTVDTKDLPPTAMPKPQHTFSDSQSPAESSPGPSLSLSAPAPGDVPKDTCVQSPISS 488

Query: 285 FTGLGPMDPLELDDYHEKMVAELTRKIGFDPEPQEKFHPVFKPPRPLEGRIARLIQNRRS 344
           F    P   L++ + H+  V  ++R      +  EK      P   L G     +   RS
Sbjct: 489 F----PCTDLKVSENHKGCVLPVSR------QNNEKM-----PLLELGGETTPPLSTERS 533

Query: 345 LEAIVQQRPRSCPDCTPRVLCNFHTFVPSSKEMVALSDNIPAGVTHKNQDIEEKIIEEQS 404
            EA+  +       C  RVL    +FV            +P   T   QD+  ++I E S
Sbjct: 534 PEAVGSE-------CPSRVLVQVRSFV------------LPVEST---QDVSSQVIPESS 571

Query: 405 LLSTYELPSCYPTK-DLTSIYDIKP 428
            +   +LP+C+  + ++ S+    P
Sbjct: 572 EVREVQLPTCHSNEPEVVSVASCAP 596


>gi|23110925 proteasome beta 6 subunit [Homo sapiens]
          Length = 239

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 30/123 (24%), Positives = 49/123 (39%), Gaps = 10/123 (8%)

Query: 4   IHGRPYCCRELEGADILSNT--------FYSNELHNPLQTVTRPTASEDRYQELRESLQQ 55
           IH R +CCR    AD  +          F+S EL+ P    T  +  ++     RE L  
Sbjct: 71  IHDRIFCCRSGSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMA 130

Query: 56  CRLPWGAEREYGGIIPISLPEDHRPKYEPPRVMGKGHQH-YGFGGETWPRKLPVEQFYYL 114
             +  G + + GG +  S+P       +   + G G  + YG+   T+   +  E+    
Sbjct: 131 GIIIAGWDPQEGGQV-YSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQF 189

Query: 115 TQN 117
           T N
Sbjct: 190 TAN 192


>gi|22749279 zinc finger protein 366 [Homo sapiens]
          Length = 744

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 37/128 (28%), Positives = 55/128 (42%), Gaps = 30/128 (23%)

Query: 70  IPISLPEDHRPKYEPPRV--MGKGHQHYG----FGGETWPRKLPVEQFYYLTQNKKSDVY 123
           +P+  P+  RPKY+   +     G Q Y     FGG+      PV+Q       K S V+
Sbjct: 112 LPLLFPQPPRPKYDSQMIDLCNVGFQFYRSLEHFGGK------PVKQ----EPIKPSAVW 161

Query: 124 GNDSLIPKPPNSTVGEICLPYPIEHPYHTHICRGAMFPTF--TSPEDLYTGIKARTQQPF 181
                 P+P  +      LP P  +PY+  +  G MFP F  +S    ++      +QP 
Sbjct: 162 ------PQPTPTPF----LPTP--YPYYPKVHPGLMFPFFVPSSSPFPFSRHTFLPKQPP 209

Query: 182 PPTVPTKA 189
            P +P KA
Sbjct: 210 EPLLPRKA 217


>gi|40807475 PML-RARA regulated adaptor molecule 1 [Homo sapiens]
          Length = 669

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 38/155 (24%), Positives = 55/155 (35%), Gaps = 28/155 (18%)

Query: 410 ELPSCYPTKDLTSIYDIKPFPKITDTKK------TEDLYWRQQSLKTQPTPYCKPDHWIH 463
           +LP   P  ++T +    P P++TD  K        DL  +   L   P P         
Sbjct: 90  DLPKKPPPPEVTDLPKKPPPPEVTDLPKKPSKLELSDLSKKFPQLGATPFP--------- 140

Query: 464 YENLKSPLRDQYNMCPDPVSLSKPSVLQNKQDTEAFTLEHFLSKPEEELFLNMENNEETR 523
               + PL+ +    P   SL +P     K   +   L H    P E             
Sbjct: 141 ----RKPLQPEVGEAPLKASLPEPGAPARK-PLQPDELSHPARPPSEP-------KSGAF 188

Query: 524 PVLGWIPRAGVTKPQTNLLELKNSFSKTGAQKRFH 558
           P   W P AG   P++   EL ++F K  AQ  F+
Sbjct: 189 PRKLWQPEAGEATPRSPQPEL-STFPKKPAQPEFN 222


>gi|197333879 genetic suppressor element 1 isoform 2 [Homo sapiens]
          Length = 1113

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 51/188 (27%), Positives = 72/188 (38%), Gaps = 38/188 (20%)

Query: 183 PTVPTKAYDSTVLKTRGNPYRYELIDIPMDSKKKALTWPGQGVYYDFPRGVEKNKPVFYP 242
           P VP +A       TR  P R+E               PG     D P+      P+  P
Sbjct: 428 PPVPAEAEHRPESTTRPGPNRHE---------------PGGR---DPPQHFGGPPPLISP 469

Query: 243 KPPKTFAPNTSLNSWDPICSAKEANIQRNLERSHWLTSYTHDFT----GLGPMDPLELDD 298
           KP    AP T+L  W+P+ S  +  ++     SH L S+   F        P+  +E   
Sbjct: 470 KPQLHAAP-TAL--WNPV-SLMDNTLETRRAESHSLHSHPAAFEPSRQAAVPLVKVERVF 525

Query: 299 YHEKMVAELTRKIGFDPEPQEKFHPVFKPPRP---------LEGRIARLIQNRRSLEAIV 349
             EK   E  RK   +P P +K+ P   PPR          L G    L +  +S + I+
Sbjct: 526 CPEK-AEEGPRKR--EPAPLDKYQPPPPPPREGGSLEHQPFLPGPGPFLAELEKSTQTIL 582

Query: 350 QQRPRSCP 357
            Q+  S P
Sbjct: 583 GQQRASLP 590


>gi|44955926 genetic suppressor element 1 isoform 1 [Homo sapiens]
          Length = 1217

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 51/188 (27%), Positives = 72/188 (38%), Gaps = 38/188 (20%)

Query: 183 PTVPTKAYDSTVLKTRGNPYRYELIDIPMDSKKKALTWPGQGVYYDFPRGVEKNKPVFYP 242
           P VP +A       TR  P R+E               PG     D P+      P+  P
Sbjct: 532 PPVPAEAEHRPESTTRPGPNRHE---------------PGGR---DPPQHFGGPPPLISP 573

Query: 243 KPPKTFAPNTSLNSWDPICSAKEANIQRNLERSHWLTSYTHDFT----GLGPMDPLELDD 298
           KP    AP T+L  W+P+ S  +  ++     SH L S+   F        P+  +E   
Sbjct: 574 KPQLHAAP-TAL--WNPV-SLMDNTLETRRAESHSLHSHPAAFEPSRQAAVPLVKVERVF 629

Query: 299 YHEKMVAELTRKIGFDPEPQEKFHPVFKPPRP---------LEGRIARLIQNRRSLEAIV 349
             EK   E  RK   +P P +K+ P   PPR          L G    L +  +S + I+
Sbjct: 630 CPEK-AEEGPRKR--EPAPLDKYQPPPPPPREGGSLEHQPFLPGPGPFLAELEKSTQTIL 686

Query: 350 QQRPRSCP 357
            Q+  S P
Sbjct: 687 GQQRASLP 694


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.136    0.428 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,926,224
Number of Sequences: 37866
Number of extensions: 1494793
Number of successful extensions: 3349
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 3337
Number of HSP's gapped (non-prelim): 25
length of query: 590
length of database: 18,247,518
effective HSP length: 108
effective length of query: 482
effective length of database: 14,157,990
effective search space: 6824151180
effective search space used: 6824151180
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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