Search of human proteins with 124494254

Search of human proteins with 124494254

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|124494254 ErbB3-binding protein 1 [Homo sapiens]
         (394 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|124494254 ErbB3-binding protein 1 [Homo sapiens]                   779   0.0  
gi|5803092 methionyl aminopeptidase 2 [Homo sapiens]                  107   2e-23
gi|40385867 methionine aminopeptidase 1D [Homo sapiens]                42   7e-04
gi|164420681 methionyl aminopeptidase 1 [Homo sapiens]                 41   0.002
gi|110349721 titin isoform novex-3 [Homo sapiens]                      33   0.58 
gi|110349719 titin isoform N2-A [Homo sapiens]                         33   0.58 
gi|239748962 PREDICTED: hypothetical protein XP_002346868 [Homo ...    32   1.3  
gi|239742982 PREDICTED: hypothetical protein XP_002342710 [Homo ...    32   1.3  
gi|87116683 proline/serine-rich coiled-coil 2 [Homo sapiens]           32   1.3  
gi|142976783 PDZ domain containing RING finger 4 [Homo sapiens]        31   2.2  
gi|239756957 PREDICTED: dynein, axonemal, heavy chain 17 [Homo s...    30   2.9  
gi|239751459 PREDICTED: dynein, axonemal, heavy chain 17 [Homo s...    30   2.9  
gi|239745966 PREDICTED: dynein, axonemal, heavy chain 17 [Homo s...    30   2.9  
gi|148839294 Ca2+-dependent activator protein for secretion 2 is...    29   6.5  
gi|148839284 Ca2+-dependent activator protein for secretion 2 is...    29   6.5  
gi|42560244 peptidylprolyl isomerase G [Homo sapiens]                  29   6.5  
gi|211059425 hypothetical protein LOC284422 [Homo sapiens]             29   6.5  
gi|27436957 membrane associated guanylate kinase, WW and PDZ dom...    29   8.4  
gi|4503337 dyskerin isoform 1 [Homo sapiens]                           29   8.4  
gi|149589008 peptidase D [Homo sapiens]                                29   8.4  
gi|215599015 dyskerin isoform 2 [Homo sapiens]                         29   8.4  
gi|31563330 A-kinase anchor protein 13 isoform 1 [Homo sapiens]        29   8.4  
gi|21493029 A-kinase anchor protein 13 isoform 2 [Homo sapiens]        29   8.4  
gi|149192855 HLA-B associated transcript 2-like [Homo sapiens]         29   8.4  
gi|91206454 hypothetical protein LOC257415 isoform 2 [Homo sapiens]    29   8.4  
gi|91206456 hypothetical protein LOC257415 isoform 1 [Homo sapiens]    29   8.4  
gi|9256614 protocadherin beta 3 precursor [Homo sapiens]               29   8.4  

>gi|124494254 ErbB3-binding protein 1 [Homo sapiens]
          Length = 394

 Score =  779 bits (2011), Expect = 0.0
 Identities = 394/394 (100%), Positives = 394/394 (100%)

Query: 1   MSGEDEQQEQTIAEDLVVTKYKMGGDIANRVLRSLVEASSSGVSVLSLCEKGDAMIMEET 60
           MSGEDEQQEQTIAEDLVVTKYKMGGDIANRVLRSLVEASSSGVSVLSLCEKGDAMIMEET
Sbjct: 1   MSGEDEQQEQTIAEDLVVTKYKMGGDIANRVLRSLVEASSSGVSVLSLCEKGDAMIMEET 60

Query: 61  GKIFKKEKEMKKGIAFPTSISVNNCVCHFSPLKSDQDYILKEGDLVKIDLGVHVDGFIAN 120
           GKIFKKEKEMKKGIAFPTSISVNNCVCHFSPLKSDQDYILKEGDLVKIDLGVHVDGFIAN
Sbjct: 61  GKIFKKEKEMKKGIAFPTSISVNNCVCHFSPLKSDQDYILKEGDLVKIDLGVHVDGFIAN 120

Query: 121 VAHTFVVDVAQGTQVTGRKADVIKAAHLCAEAALRLVKPGNQNTQVTEAWNKVAHSFNCT 180
           VAHTFVVDVAQGTQVTGRKADVIKAAHLCAEAALRLVKPGNQNTQVTEAWNKVAHSFNCT
Sbjct: 121 VAHTFVVDVAQGTQVTGRKADVIKAAHLCAEAALRLVKPGNQNTQVTEAWNKVAHSFNCT 180

Query: 181 PIEGMLSHQLKQHVIDGEKTIIQNPTDQQKKDHEKAEFEVHEVYAVDVLVSSGEGKAKDA 240
           PIEGMLSHQLKQHVIDGEKTIIQNPTDQQKKDHEKAEFEVHEVYAVDVLVSSGEGKAKDA
Sbjct: 181 PIEGMLSHQLKQHVIDGEKTIIQNPTDQQKKDHEKAEFEVHEVYAVDVLVSSGEGKAKDA 240

Query: 241 GQRTTIYKRDPSKQYGLKMKTSRAFFSEVERRFDAMPFTLRAFEDEKKARMGVVECAKHE 300
           GQRTTIYKRDPSKQYGLKMKTSRAFFSEVERRFDAMPFTLRAFEDEKKARMGVVECAKHE
Sbjct: 241 GQRTTIYKRDPSKQYGLKMKTSRAFFSEVERRFDAMPFTLRAFEDEKKARMGVVECAKHE 300

Query: 301 LLQPFNVLYEKEGEFVAQFKFTVLLMPNGPMRITSGPFEPDLYKSEMEVQDAELKALLQS 360
           LLQPFNVLYEKEGEFVAQFKFTVLLMPNGPMRITSGPFEPDLYKSEMEVQDAELKALLQS
Sbjct: 301 LLQPFNVLYEKEGEFVAQFKFTVLLMPNGPMRITSGPFEPDLYKSEMEVQDAELKALLQS 360

Query: 361 SASRKTQKKKKKKASKTAENATSGETLEENEAGD 394
           SASRKTQKKKKKKASKTAENATSGETLEENEAGD
Sbjct: 361 SASRKTQKKKKKKASKTAENATSGETLEENEAGD 394


>gi|5803092 methionyl aminopeptidase 2 [Homo sapiens]
          Length = 478

 Score =  107 bits (267), Expect = 2e-23
 Identities = 78/327 (23%), Positives = 144/327 (44%), Gaps = 17/327 (5%)

Query: 5   DEQQEQTIAEDLVVTKYKMGGDIANRVLRSLVEASSSGVSVLSLCEKGDAMIMEETGKIF 64
           +E++    A + +   ++   +   +V + ++     G++++ +CEK     +E+  +  
Sbjct: 153 EEKKALDQASEEIWNDFREAAEAHRQVRKYVMSWIKPGMTMIEICEK-----LEDCSRKL 207

Query: 65  KKEKEMKKGIAFPTSISVNNCVCHFSPLKSDQDYILKEGDLVKIDLGVHVDGFIANVAHT 124
            KE  +  G+AFPT  S+NNC  H++P   D   +L+  D+ KID G H+ G I + A T
Sbjct: 208 IKENGLNAGLAFPTGCSLNNCAAHYTPNAGDTT-VLQYDDICKIDFGTHISGRIIDCAFT 266

Query: 125 FVVDVAQGTQVTGRKADVIKAAHLCAEAALRLVKPGNQNTQVTEAWNKV--AHSFNCTPI 182
              +    T +   K D       CA   +RL   G    +V E++       ++   PI
Sbjct: 267 VTFNPKYDTLLKAVK-DATNTGIKCAGIDVRLCDVGEAIQEVMESYEVEIDGKTYQVKPI 325

Query: 183 EGMLSHQLKQHVIDGEKTIIQNPTDQQKKDHEKAEFEVHEVYAVDVLVSSGEGKAKDAGQ 242
             +  H + Q+ I   KT+         K  E    E  EVYA++   S+G+G   D  +
Sbjct: 326 RNLNGHSIGQYRIHAGKTV------PIVKGGEATRMEEGEVYAIETFGSTGKGVVHDDME 379

Query: 243 RTTIYKRDPSKQYGLKMKTSRAFFSEVERRFDAMPFTLRAFE--DEKKARMGVVECAKHE 300
            +   K        +++  ++   + +   F  + F  R  +   E K  M +       
Sbjct: 380 CSHYMKNFDVGHVPIRLPRTKHLLNVINENFGTLAFCRRWLDRLGESKYLMALKNLCDLG 439

Query: 301 LLQPFNVLYEKEGEFVAQFKFTVLLMP 327
           ++ P+  L + +G + AQF+ T+LL P
Sbjct: 440 IVDPYPPLCDIKGSYTAQFEHTILLRP 466


>gi|40385867 methionine aminopeptidase 1D [Homo sapiens]
          Length = 335

 Score = 42.4 bits (98), Expect = 7e-04
 Identities = 27/102 (26%), Positives = 51/102 (50%), Gaps = 11/102 (10%)

Query: 76  FPTSI--SVNNCVCHFSPLKSDQDYILKEGDLVKIDLGVHVDGFIANVAHTFVVDVAQGT 133
           FP S+  SVNN +CH  P        L++GD++ ID+ V+ +G+  + + TF+V      
Sbjct: 147 FPKSVCTSVNNVLCHGIP----DSRPLQDGDIINIDVTVYYNGYHGDTSETFLVG---NV 199

Query: 134 QVTGRKADVIKAAHLCAEAALRLVKPGNQNTQVTEAWNKVAH 175
              G+K  +++ A  C + A+   + G   + +    + + H
Sbjct: 200 DECGKK--LVEVARRCRDEAIAACRAGAPFSVIGNTISHITH 239


>gi|164420681 methionyl aminopeptidase 1 [Homo sapiens]
          Length = 386

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 11/115 (9%)

Query: 76  FPTSI--SVNNCVCHFSPLKSDQDYILKEGDLVKIDLGVHVDGFIANVAHTFVVDVAQGT 133
           FP S   SVN  +CH  P +      L+EGD+V +D+ ++ +G+  ++  TF V      
Sbjct: 189 FPKSCCTSVNEVICHGIPDRRP----LQEGDIVNVDITLYRNGYHGDLNETFFVG----- 239

Query: 134 QVTGRKADVIKAAHLCAEAALRLVKPGNQNTQVTEAWNKVAHSFNCTPIEGMLSH 188
           +V      +++  + C   A+  VKPG +  ++     K A +   + +     H
Sbjct: 240 EVDDGARKLVQTTYECLMQAIDAVKPGVRYRELGNIIQKHAQANGFSVVRSYCGH 294


>gi|110349721 titin isoform novex-3 [Homo sapiens]
          Length = 5604

 Score = 32.7 bits (73), Expect = 0.58
 Identities = 58/291 (19%), Positives = 105/291 (36%), Gaps = 42/291 (14%)

Query: 117 FIANVAHTFVVDVAQGTQVTGRKADVIKAAHLCA--EAALRLVKPGNQNTQVT------- 167
           + A    T   +V Q    +   A V+ A  +    E  +  V+   Q T  T       
Sbjct: 404 YAAEAVATGAKEVKQDADKSAAVATVVAAVDMARVREPVISAVEQTAQRTTTTAVHIQPA 463

Query: 168 -EAWNKVAHSFNCTPIEGMLSHQLKQHVIDGEKTIIQNPTDQQKKDHEKAEFEVHEVYAV 226
            E   K A     T +        +Q +    K +I    +Q    HE+   E  + +  
Sbjct: 464 QEQVRKEAEKTAVTKVVVAADKAKEQELKSRTKEVITTKQEQMHVTHEQIRKETEKTFVP 523

Query: 227 DVLVSSGEGKAKDAGQRTTIYKRDPSKQYGLKMKTSRAFFSEVERRFDAMPFTLRAFEDE 286
            V++S+ + K     Q T I +    KQ   K  T  A   E E    +M     A    
Sbjct: 524 KVVISAAKAKE----QETRISEEITKKQ---KQVTQEAIRQETEITAASMVVVATA---- 572

Query: 287 KKARMGVVECAKHELLQPFNVLYEKEGEFVAQFKFTVLLMPNGPMRITSGPFEPDLYKSE 346
           K  ++  V  A+ E     + ++    + + + + TV+               P +  + 
Sbjct: 573 KSTKLETVPGAQEETTTQQDQMHLSYEKIMKETRKTVV---------------PKVIVAT 617

Query: 347 MEVQDAELKALLQSSASRK------TQKKKKKKASKTAENATSGETLEENE 391
            +V++ +L +  +   + K      TQ+K +K+A KTA +  +  T +  E
Sbjct: 618 PKVKEQDLVSRGREGITTKREQVQITQEKMRKEAEKTALSTIAVATAKAKE 668


>gi|110349719 titin isoform N2-A [Homo sapiens]
          Length = 33423

 Score = 32.7 bits (73), Expect = 0.58
 Identities = 58/291 (19%), Positives = 105/291 (36%), Gaps = 42/291 (14%)

Query: 117 FIANVAHTFVVDVAQGTQVTGRKADVIKAAHLCA--EAALRLVKPGNQNTQVT------- 167
           + A    T   +V Q    +   A V+ A  +    E  +  V+   Q T  T       
Sbjct: 404 YAAEAVATGAKEVKQDADKSAAVATVVAAVDMARVREPVISAVEQTAQRTTTTAVHIQPA 463

Query: 168 -EAWNKVAHSFNCTPIEGMLSHQLKQHVIDGEKTIIQNPTDQQKKDHEKAEFEVHEVYAV 226
            E   K A     T +        +Q +    K +I    +Q    HE+   E  + +  
Sbjct: 464 QEQVRKEAEKTAVTKVVVAADKAKEQELKSRTKEVITTKQEQMHVTHEQIRKETEKTFVP 523

Query: 227 DVLVSSGEGKAKDAGQRTTIYKRDPSKQYGLKMKTSRAFFSEVERRFDAMPFTLRAFEDE 286
            V++S+ + K     Q T I +    KQ   K  T  A   E E    +M     A    
Sbjct: 524 KVVISAAKAKE----QETRISEEITKKQ---KQVTQEAIRQETEITAASMVVVATA---- 572

Query: 287 KKARMGVVECAKHELLQPFNVLYEKEGEFVAQFKFTVLLMPNGPMRITSGPFEPDLYKSE 346
           K  ++  V  A+ E     + ++    + + + + TV+               P +  + 
Sbjct: 573 KSTKLETVPGAQEETTTQQDQMHLSYEKIMKETRKTVV---------------PKVIVAT 617

Query: 347 MEVQDAELKALLQSSASRK------TQKKKKKKASKTAENATSGETLEENE 391
            +V++ +L +  +   + K      TQ+K +K+A KTA +  +  T +  E
Sbjct: 618 PKVKEQDLVSRGREGITTKREQVQITQEKMRKEAEKTALSTIAVATAKAKE 668


>gi|239748962 PREDICTED: hypothetical protein XP_002346868 [Homo
           sapiens]
          Length = 155

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 8/63 (12%)

Query: 340 PDLYKSEMEVQDAELK--------ALLQSSASRKTQKKKKKKASKTAENATSGETLEENE 391
           PD+ ++  +    +LK        A  Q SA +K +KKKKK A  TA    +G  +  N 
Sbjct: 75  PDVVQTRQQAYSDKLKQQQAAAATANQQGSAKKKKKKKKKKNAENTANGEENGAHIIANN 134

Query: 392 AGD 394
             D
Sbjct: 135 HTD 137


>gi|239742982 PREDICTED: hypothetical protein XP_002342710 [Homo
           sapiens]
          Length = 177

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 8/63 (12%)

Query: 340 PDLYKSEMEVQDAELK--------ALLQSSASRKTQKKKKKKASKTAENATSGETLEENE 391
           PD+ ++  +    +LK        A  Q SA +K +KKKKK A  TA    +G  +  N 
Sbjct: 97  PDVVQTRQQAYSDKLKQQQAAAATANQQGSAKKKKKKKKKKNAENTANGEENGAHIIANN 156

Query: 392 AGD 394
             D
Sbjct: 157 HTD 159


>gi|87116683 proline/serine-rich coiled-coil 2 [Homo sapiens]
          Length = 1989

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 15/51 (29%), Positives = 31/51 (60%)

Query: 339 EPDLYKSEMEVQDAELKALLQSSASRKTQKKKKKKASKTAENATSGETLEE 389
           E  L + E E+ + +L+ L   SAS+K Q+K+++   ++ E  T  +T+++
Sbjct: 359 EKKLGEDEEELSELQLRLLALQSASKKWQQKEQQVMKESKEKLTKTKTVQQ 409


>gi|142976783 PDZ domain containing RING finger 4 [Homo sapiens]
          Length = 778

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 4/78 (5%)

Query: 320 KFTVLLMPNGPMRITSGPFEPD----LYKSEMEVQDAELKALLQSSASRKTQKKKKKKAS 375
           K  VLL+    +++  G  E +    L +  +E+ + E    +Q +A+   Q KK+++  
Sbjct: 219 KRIVLLVARPEIQLDEGWLEDERNEFLEELNLEMLEEEHNEAMQPTANEVEQPKKQEEEE 278

Query: 376 KTAENATSGETLEENEAG 393
            T + ATS     E ++G
Sbjct: 279 GTTDTATSSSNNHEKDSG 296


>gi|239756957 PREDICTED: dynein, axonemal, heavy chain 17 [Homo
            sapiens]
          Length = 4470

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 10/75 (13%)

Query: 306  NVLYEKEGEFVAQFKFTVLLMPNGPMRITSGPFEPDLYKSEMEVQDAELKALLQSS---- 361
            N+L +K  E VA+ +     + NG M++ S   + D  K+++ +Q+AELK   +S+    
Sbjct: 3037 NLLAKKRTELVAKIE----RLENGLMKLQSTASQVDDLKAKLAIQEAELKQKNESADQLI 3092

Query: 362  --ASRKTQKKKKKKA 374
                 + +K  K+KA
Sbjct: 3093 QVVGIEAEKVSKEKA 3107


>gi|239751459 PREDICTED: dynein, axonemal, heavy chain 17 [Homo
            sapiens]
          Length = 4485

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 10/75 (13%)

Query: 306  NVLYEKEGEFVAQFKFTVLLMPNGPMRITSGPFEPDLYKSEMEVQDAELKALLQSS---- 361
            N+L +K  E VA+ +     + NG M++ S   + D  K+++ +Q+AELK   +S+    
Sbjct: 3015 NLLAKKRTELVAKIE----RLENGLMKLQSTASQVDDLKAKLAIQEAELKQKNESADQLI 3070

Query: 362  --ASRKTQKKKKKKA 374
                 + +K  K+KA
Sbjct: 3071 QVVGIEAEKVSKEKA 3085


>gi|239745966 PREDICTED: dynein, axonemal, heavy chain 17 [Homo
            sapiens]
          Length = 4485

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 10/75 (13%)

Query: 306  NVLYEKEGEFVAQFKFTVLLMPNGPMRITSGPFEPDLYKSEMEVQDAELKALLQSS---- 361
            N+L +K  E VA+ +     + NG M++ S   + D  K+++ +Q+AELK   +S+    
Sbjct: 3015 NLLAKKRTELVAKIE----RLENGLMKLQSTASQVDDLKAKLAIQEAELKQKNESADQLI 3070

Query: 362  --ASRKTQKKKKKKA 374
                 + +K  K+KA
Sbjct: 3071 QVVGIEAEKVSKEKA 3085


>gi|148839294 Ca2+-dependent activator protein for secretion 2
           isoform a [Homo sapiens]
          Length = 1296

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)

Query: 55  MIMEETGKIFKKEKEMKKGIAFPTSISVNNCVCHFSPL-KSDQDYILKEGDLVKIDLGVH 113
           +  E TG +  ++KE+ + I +PTS S  +   H   + K+ QD  LK    V++D   H
Sbjct: 428 LFTESTGVLALEDKELGRVILYPTSNSSKSAELHRMVVPKNSQDSDLKIKLAVRMDKPAH 487

Query: 114 V 114
           +
Sbjct: 488 M 488


>gi|148839284 Ca2+-dependent activator protein for secretion 2
           isoform b [Homo sapiens]
          Length = 1255

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)

Query: 55  MIMEETGKIFKKEKEMKKGIAFPTSISVNNCVCHFSPL-KSDQDYILKEGDLVKIDLGVH 113
           +  E TG +  ++KE+ + I +PTS S  +   H   + K+ QD  LK    V++D   H
Sbjct: 428 LFTESTGVLALEDKELGRVILYPTSNSSKSAELHRMVVPKNSQDSDLKIKLAVRMDKPAH 487

Query: 114 V 114
           +
Sbjct: 488 M 488


>gi|42560244 peptidylprolyl isomerase G [Homo sapiens]
          Length = 754

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 12/30 (40%), Positives = 20/30 (66%)

Query: 359 QSSASRKTQKKKKKKASKTAENATSGETLE 388
           ++S   K +KKK+KK+ K+A + +  E LE
Sbjct: 236 KNSRKHKKEKKKRKKSKKSASSESEAENLE 265


>gi|211059425 hypothetical protein LOC284422 [Homo sapiens]
          Length = 130

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 10/63 (15%)

Query: 334 TSGPFEPDLYKSEMEVQDAELKALLQSSASRKTQKKKKKKASKTAENATS--GETLEENE 391
           T+   E +LY+ + E +  + +A        K +++K+KK  KTA+   S  G  LEE E
Sbjct: 67  TTFRMESNLYQDQSEDKREKKEA--------KEKEEKRKKEKKTAKEGESNLGLDLEEKE 118

Query: 392 AGD 394
            GD
Sbjct: 119 PGD 121


>gi|27436957 membrane associated guanylate kinase, WW and PDZ domain
           containing 2 [Homo sapiens]
          Length = 1455

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 28/111 (25%), Positives = 44/111 (39%), Gaps = 19/111 (17%)

Query: 94  SDQDYILKEGDLVKIDLGVHVDGF-IANVAHTFVVDVAQGTQVTGRKADVIKAAHLCA-- 150
           +D+D  L  GD +     V+VDG  +A   H +V+D+       G+    ++   LC   
Sbjct: 813 ADRDGRLHPGDEL-----VYVDGIPVAGKTHRYVIDLMHHAARNGQVNLTVRRKVLCGGE 867

Query: 151 ----------EAALRLVKPGNQNTQVTEAWNKVAHSFNCTPIEGMLSHQLK 191
                       +     P +     T + N  A S N +P EG  SH L+
Sbjct: 868 PCPENGRSPGSVSTHHSSPRSDYATYTNS-NHAAPSSNASPPEGFASHSLQ 917


>gi|4503337 dyskerin isoform 1 [Homo sapiens]
          Length = 514

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 8/51 (15%)

Query: 337 PFEPDLYKSEMEV--QDAELKALLQSSA------SRKTQKKKKKKASKTAE 379
           P  P L K E +   +D + KA L+S A      S  T+KKKKKK +K  E
Sbjct: 460 PAAPQLIKKEKKKSKKDKKAKAGLESGAEPGDGDSDTTKKKKKKKKAKEVE 510


>gi|149589008 peptidase D [Homo sapiens]
          Length = 493

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 4/78 (5%)

Query: 83  NNCVCHFSPLKSDQDYILKEGDLVKIDLGVHVDGFIANVAHTFVVDVAQGTQVTGRKADV 142
           N+ V H+    +  D  ++ GD+   D+G     F +++  +F    A G     +KA V
Sbjct: 250 NSAVLHYGHAGAPNDRTIQNGDMCLFDMGGEYYCFASDITCSF---PANGKFTADQKA-V 305

Query: 143 IKAAHLCAEAALRLVKPG 160
            +A    + A +  +KPG
Sbjct: 306 YEAVLRSSRAVMGAMKPG 323


>gi|215599015 dyskerin isoform 2 [Homo sapiens]
          Length = 509

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 8/51 (15%)

Query: 337 PFEPDLYKSEMEV--QDAELKALLQSSA------SRKTQKKKKKKASKTAE 379
           P  P L K E +   +D + KA L+S A      S  T+KKKKKK +K  E
Sbjct: 455 PAAPQLIKKEKKKSKKDKKAKAGLESGAEPGDGDSDTTKKKKKKKKAKEVE 505


>gi|31563330 A-kinase anchor protein 13 isoform 1 [Homo sapiens]
          Length = 2817

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 14/42 (33%), Positives = 24/42 (57%)

Query: 350 QDAELKALLQSSASRKTQKKKKKKASKTAENATSGETLEENE 391
           ++ +L  + +SSA+++  K K    S   ENA S  TL+E +
Sbjct: 910 EEGKLLVVSESSAAQEQDKDKAVTCSSIKENALSSGTLQEEQ 951


>gi|21493029 A-kinase anchor protein 13 isoform 2 [Homo sapiens]
          Length = 2813

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 14/42 (33%), Positives = 24/42 (57%)

Query: 350 QDAELKALLQSSASRKTQKKKKKKASKTAENATSGETLEENE 391
           ++ +L  + +SSA+++  K K    S   ENA S  TL+E +
Sbjct: 910 EEGKLLVVSESSAAQEQDKDKAVTCSSIKENALSSGTLQEEQ 951


>gi|149192855 HLA-B associated transcript 2-like [Homo sapiens]
          Length = 2229

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 5/59 (8%)

Query: 335 SGPFEPDLYKS-EMEVQDAELKALLQSSASRKTQKKKKKKASKTAENATSGETLEENEA 392
           SGP +  + K+ ++E ++ EL+ + Q      T+  K+K+ S TAE     +  EEN+A
Sbjct: 939 SGPIKKPVLKALKVEDKEKELEKIKQELGEESTRLAKEKEQSPTAEK----DEDEENDA 993


>gi|91206454 hypothetical protein LOC257415 isoform 2 [Homo sapiens]
          Length = 237

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 14/52 (26%), Positives = 30/52 (57%)

Query: 343 YKSEMEVQDAELKALLQSSASRKTQKKKKKKASKTAENATSGETLEENEAGD 394
           +K E+E    +L +  +SS+ ++ +KKK+KK S    +++S  +   + + D
Sbjct: 59  WKKELEKHREKLLSGSESSSKKRQRKKKEKKKSGRYSSSSSSSSDSSSSSSD 110


>gi|91206456 hypothetical protein LOC257415 isoform 1 [Homo sapiens]
          Length = 247

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 14/52 (26%), Positives = 30/52 (57%)

Query: 343 YKSEMEVQDAELKALLQSSASRKTQKKKKKKASKTAENATSGETLEENEAGD 394
           +K E+E    +L +  +SS+ ++ +KKK+KK S    +++S  +   + + D
Sbjct: 69  WKKELEKHREKLLSGSESSSKKRQRKKKEKKKSGRYSSSSSSSSDSSSSSSD 120


>gi|9256614 protocadherin beta 3 precursor [Homo sapiens]
          Length = 796

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 7/93 (7%)

Query: 37  EASSSGVSVLSLCEKGDAMIMEETGKIFKKEKEMKKGIAFPTSISVNNCVCHFS-PLKSD 95
           E ++ G  V+S   K    +  +TG +   EK  ++ +  PT      C+ HF   L++ 
Sbjct: 58  ELAARGAQVVSKGNKQHFQLSHQTGDLLLNEKLDREELCGPT----EPCILHFQILLQNP 113

Query: 96  QDYILKEGDLVKIDLGVHVDGFIANVAHTFVVD 128
             ++  E  L  ID+  H   F  N  H  +++
Sbjct: 114 LQFVTNE--LRIIDVNDHSPVFFENEMHLKILE 144


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.313    0.129    0.359 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,798,802
Number of Sequences: 37866
Number of extensions: 581157
Number of successful extensions: 1911
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 1866
Number of HSP's gapped (non-prelim): 45
length of query: 394
length of database: 18,247,518
effective HSP length: 104
effective length of query: 290
effective length of database: 14,309,454
effective search space: 4149741660
effective search space used: 4149741660
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.