Guide to the Human Genome
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Name: METAP1 Sequence: fasta or formatted (386aa) NCBI GI: 164420681
Description:

methionyl aminopeptidase 1

Referenced in:

Aminopeptidases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         26           2
 C cysteine            4.1         16           2
 D aspartate           5.4         21           2
 E glutamate           6.5         25           2
 F phenylalanine       2.8         11           2
 G glycine             7.8         30           2
 H histidine           4.1         16           1
 I isoleucine          5.2         20           2
 K lysine              5.7         22           2
 L leucine             6.7         26           2
 M methionine          2.3          9           1
 N asparagine          3.1         12           1
 P proline             5.4         21           1
 Q glutamine           3.6         14           1
 R arginine            5.7         22           2
 S serine              5.7         22           2
 T threonine           6.5         25           2
 V valine              7.0         27           2
 W tryptophan          1.6          6           1
 Y tyrosine            3.9         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   methionyl aminopeptidase 1 
MAP1D                 0.290   methionine aminopeptidase 1D 
PA2G4                 0.020   ErbB3-binding protein 1 
ANKMY2                0.011   ankyrin repeat and MYND domain containing 2 
MYO1H                 0.010   myosin 1H 
XPNPEP3               0.010   X-prolyl aminopeptidase (aminopeptidase P) 3, putati...
TDRD1                 0.009   tudor domain containing 1 
ABCC1                 0.006   ATP-binding cassette, sub-family C, member 1 isofor...
ABCC1                 0.006   ATP-binding cassette, sub-family C, member 1 isofor...
ABCC1                 0.006   ATP-binding cassette, sub-family C, member 1 isofor...
ABCC1                 0.006   ATP-binding cassette, sub-family C, member 1 isofor...
ABCC1                 0.006   ATP-binding cassette, sub-family C, member 1 isofor...
ZMYND10               0.006   zinc finger, MYND domain-containing 10 
LTBP2                 0.006   latent transforming growth factor beta binding protei...
L3MBTL2               0.005   l(3)mbt-like 2 
CRYGD                 0.005   crystallin, gamma D 
RIMBP3B               0.005   RIMS binding protein 3B 
RIMBP3C               0.005   RIMS binding protein 3C 
ZNHIT6                0.005   zinc finger, HIT type 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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