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Search of human proteins with 38201659
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|38201659 inhibitor of growth family, member 3 isoform 3
[Homo sapiens]
(92 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|38201659 inhibitor of growth family, member 3 isoform 3 [Homo... 187 1e-48
gi|38201655 inhibitor of growth family, member 3 isoform 1 [Homo... 180 2e-46
gi|18644730 inhibitor of growth family, member 5 [Homo sapiens] 66 5e-12
gi|189083832 inhibitor of growth family, member 4 isoform 6 [Hom... 60 3e-10
gi|189083828 inhibitor of growth family, member 4 isoform 4 [Hom... 60 3e-10
gi|189083826 inhibitor of growth family, member 4 isoform 3 [Hom... 60 3e-10
gi|38201670 inhibitor of growth family, member 4 isoform 1 [Homo... 60 3e-10
gi|189083821 inhibitor of growth family, member 4 isoform 9 [Hom... 60 3e-10
gi|38201667 inhibitor of growth family, member 1 isoform A [Homo... 52 1e-07
gi|4504695 inhibitor of growth family, member 2 [Homo sapiens] 45 2e-05
gi|63252900 tropomyosin 1 alpha chain isoform 4 [Homo sapiens] 34 0.029
gi|63252898 tropomyosin 1 alpha chain isoform 1 [Homo sapiens] 34 0.029
gi|63252896 tropomyosin 1 alpha chain isoform 3 [Homo sapiens] 34 0.029
gi|27597085 tropomyosin 1 alpha chain isoform 5 [Homo sapiens] 34 0.029
gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo... 34 0.029
gi|189083830 inhibitor of growth family, member 4 isoform 5 [Hom... 33 0.050
gi|114155140 tropomyosin 3 isoform 1 [Homo sapiens] 33 0.065
gi|31542661 transmembrane protein 57 [Homo sapiens] 33 0.065
gi|75677351 suppressor of defective silencing 3 [Homo sapiens] 32 0.084
gi|110611903 myosin, heavy polypeptide 4, skeletal muscle [Homo ... 32 0.084
gi|21735548 centrosomal protein 2 [Homo sapiens] 32 0.11
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens] 32 0.11
gi|36031016 CTCL tumor antigen L14-2 [Homo sapiens] 32 0.14
gi|239748549 PREDICTED: hypothetical protein LOC100129791 [Homo ... 30 0.32
gi|239742533 PREDICTED: hypothetical protein LOC100129791 [Homo ... 30 0.32
gi|156104908 myosin heavy chain 6 [Homo sapiens] 30 0.32
gi|8922950 meiosis-specific nuclear structural 1 [Homo sapiens] 29 0.72
gi|64085252 hypothetical protein LOC145508 [Homo sapiens] 29 0.72
gi|157419140 laminin, gamma 2 isoform b precursor [Homo sapiens] 29 0.93
gi|157419138 laminin, gamma 2 isoform a precursor [Homo sapiens] 29 0.93
>gi|38201659 inhibitor of growth family, member 3 isoform 3 [Homo
sapiens]
Length = 92
Score = 187 bits (476), Expect = 1e-48
Identities = 92/92 (100%), Positives = 92/92 (100%)
Query: 1 MLYLEDYLEMIEQLPMDLRDRFTEMREMDLQVQNAMDQLEQRVSEFFMNAKKNKPEWREE 60
MLYLEDYLEMIEQLPMDLRDRFTEMREMDLQVQNAMDQLEQRVSEFFMNAKKNKPEWREE
Sbjct: 1 MLYLEDYLEMIEQLPMDLRDRFTEMREMDLQVQNAMDQLEQRVSEFFMNAKKNKPEWREE 60
Query: 61 QMASIKKDYYKALEDADEKVQLANQIYDLQHF 92
QMASIKKDYYKALEDADEKVQLANQIYDLQHF
Sbjct: 61 QMASIKKDYYKALEDADEKVQLANQIYDLQHF 92
>gi|38201655 inhibitor of growth family, member 3 isoform 1 [Homo
sapiens]
Length = 418
Score = 180 bits (457), Expect = 2e-46
Identities = 89/89 (100%), Positives = 89/89 (100%)
Query: 1 MLYLEDYLEMIEQLPMDLRDRFTEMREMDLQVQNAMDQLEQRVSEFFMNAKKNKPEWREE 60
MLYLEDYLEMIEQLPMDLRDRFTEMREMDLQVQNAMDQLEQRVSEFFMNAKKNKPEWREE
Sbjct: 1 MLYLEDYLEMIEQLPMDLRDRFTEMREMDLQVQNAMDQLEQRVSEFFMNAKKNKPEWREE 60
Query: 61 QMASIKKDYYKALEDADEKVQLANQIYDL 89
QMASIKKDYYKALEDADEKVQLANQIYDL
Sbjct: 61 QMASIKKDYYKALEDADEKVQLANQIYDL 89
>gi|18644730 inhibitor of growth family, member 5 [Homo sapiens]
Length = 240
Score = 66.2 bits (160), Expect = 5e-12
Identities = 32/88 (36%), Positives = 53/88 (60%)
Query: 2 LYLEDYLEMIEQLPMDLRDRFTEMREMDLQVQNAMDQLEQRVSEFFMNAKKNKPEWREEQ 61
+YLE YL+ IE LP +L+ F MRE+D + ++ +++ +E+ K P+ R E+
Sbjct: 5 MYLEHYLDSIENLPCELQRNFQLMRELDQRTEDKKAEIDILAAEYISTVKTLSPDQRVER 64
Query: 62 MASIKKDYYKALEDADEKVQLANQIYDL 89
+ I+ Y K E +D+KVQLA Q Y++
Sbjct: 65 LQKIQNAYSKCKEYSDDKVQLAMQTYEM 92
>gi|189083832 inhibitor of growth family, member 4 isoform 6 [Homo
sapiens]
Length = 179
Score = 60.5 bits (145), Expect = 3e-10
Identities = 29/88 (32%), Positives = 53/88 (60%)
Query: 2 LYLEDYLEMIEQLPMDLRDRFTEMREMDLQVQNAMDQLEQRVSEFFMNAKKNKPEWREEQ 61
+YLE YL+ IE LP +L+ F MR++D + ++ ++++ +E+ +A+ E +
Sbjct: 5 MYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMSSARSLSSEEKLAL 64
Query: 62 MASIKKDYYKALEDADEKVQLANQIYDL 89
+ I++ Y K E D+KVQLA Q Y++
Sbjct: 65 LKQIQEAYGKCKEFGDDKVQLAMQTYEM 92
>gi|189083828 inhibitor of growth family, member 4 isoform 4 [Homo
sapiens]
Length = 245
Score = 60.5 bits (145), Expect = 3e-10
Identities = 29/88 (32%), Positives = 53/88 (60%)
Query: 2 LYLEDYLEMIEQLPMDLRDRFTEMREMDLQVQNAMDQLEQRVSEFFMNAKKNKPEWREEQ 61
+YLE YL+ IE LP +L+ F MR++D + ++ ++++ +E+ +A+ E +
Sbjct: 5 MYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMSSARSLSSEEKLAL 64
Query: 62 MASIKKDYYKALEDADEKVQLANQIYDL 89
+ I++ Y K E D+KVQLA Q Y++
Sbjct: 65 LKQIQEAYGKCKEFGDDKVQLAMQTYEM 92
>gi|189083826 inhibitor of growth family, member 4 isoform 3 [Homo
sapiens]
Length = 246
Score = 60.5 bits (145), Expect = 3e-10
Identities = 29/88 (32%), Positives = 53/88 (60%)
Query: 2 LYLEDYLEMIEQLPMDLRDRFTEMREMDLQVQNAMDQLEQRVSEFFMNAKKNKPEWREEQ 61
+YLE YL+ IE LP +L+ F MR++D + ++ ++++ +E+ +A+ E +
Sbjct: 5 MYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMSSARSLSSEEKLAL 64
Query: 62 MASIKKDYYKALEDADEKVQLANQIYDL 89
+ I++ Y K E D+KVQLA Q Y++
Sbjct: 65 LKQIQEAYGKCKEFGDDKVQLAMQTYEM 92
>gi|38201670 inhibitor of growth family, member 4 isoform 1 [Homo
sapiens]
Length = 248
Score = 60.5 bits (145), Expect = 3e-10
Identities = 29/88 (32%), Positives = 53/88 (60%)
Query: 2 LYLEDYLEMIEQLPMDLRDRFTEMREMDLQVQNAMDQLEQRVSEFFMNAKKNKPEWREEQ 61
+YLE YL+ IE LP +L+ F MR++D + ++ ++++ +E+ +A+ E +
Sbjct: 5 MYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMSSARSLSSEEKLAL 64
Query: 62 MASIKKDYYKALEDADEKVQLANQIYDL 89
+ I++ Y K E D+KVQLA Q Y++
Sbjct: 65 LKQIQEAYGKCKEFGDDKVQLAMQTYEM 92
>gi|189083821 inhibitor of growth family, member 4 isoform 9 [Homo
sapiens]
Length = 249
Score = 60.5 bits (145), Expect = 3e-10
Identities = 29/88 (32%), Positives = 53/88 (60%)
Query: 2 LYLEDYLEMIEQLPMDLRDRFTEMREMDLQVQNAMDQLEQRVSEFFMNAKKNKPEWREEQ 61
+YLE YL+ IE LP +L+ F MR++D + ++ ++++ +E+ +A+ E +
Sbjct: 5 MYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMSSARSLSSEEKLAL 64
Query: 62 MASIKKDYYKALEDADEKVQLANQIYDL 89
+ I++ Y K E D+KVQLA Q Y++
Sbjct: 65 LKQIQEAYGKCKEFGDDKVQLAMQTYEM 92
>gi|38201667 inhibitor of growth family, member 1 isoform A [Homo
sapiens]
Length = 279
Score = 51.6 bits (122), Expect = 1e-07
Identities = 25/87 (28%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 3 YLEDYLEMIEQLPMDLRDRFTEMREMDLQVQNAMDQLEQRVSEFFMNAKKNKPEWREEQM 62
Y+EDYL+ IE LP DL+ + MRE+D + Q + +L++ F +++ + +
Sbjct: 15 YVEDYLDSIESLPFDLQRNVSLMREIDAKYQEILKELDECYERF---SRETDGAQKRRML 71
Query: 63 ASIKKDYYKALEDADEKVQLANQIYDL 89
+++ ++ E DEK+Q+ +Q+ +L
Sbjct: 72 HCVQRALIRSQELGDEKIQIVSQMVEL 98
>gi|4504695 inhibitor of growth family, member 2 [Homo sapiens]
Length = 280
Score = 44.7 bits (104), Expect = 2e-05
Identities = 21/87 (24%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 3 YLEDYLEMIEQLPMDLRDRFTEMREMDLQVQNAMDQLEQRVSEFFMNAKKNKPEWREEQM 62
Y++DYLE +E LP D++ + +RE+D + Q + +++ ++ K++ ++
Sbjct: 27 YVQDYLECVESLPHDMQRNVSVLRELDNKYQETLKEIDDVYEKY---KKEDDLNQKKRLQ 83
Query: 63 ASIKKDYYKALEDADEKVQLANQIYDL 89
+++ + E DEK+Q+ Q+ +L
Sbjct: 84 QLLQRALINSQELGDEKIQIVTQMLEL 110
>gi|63252900 tropomyosin 1 alpha chain isoform 4 [Homo sapiens]
Length = 284
Score = 33.9 bits (76), Expect = 0.029
Identities = 21/72 (29%), Positives = 42/72 (58%), Gaps = 12/72 (16%)
Query: 24 EMREMDLQVQNAMDQLEQRVSEFFMNAKKNKPEWREEQMASIKKD----------YYKAL 73
+M+ + L +NA+D+ EQ +E A +++ + E+++ S++K Y +AL
Sbjct: 7 KMQMLKLDKENALDRAEQ--AEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEAL 64
Query: 74 EDADEKVQLANQ 85
+DA EK++LA +
Sbjct: 65 KDAQEKLELAEK 76
>gi|63252898 tropomyosin 1 alpha chain isoform 1 [Homo sapiens]
Length = 284
Score = 33.9 bits (76), Expect = 0.029
Identities = 21/72 (29%), Positives = 42/72 (58%), Gaps = 12/72 (16%)
Query: 24 EMREMDLQVQNAMDQLEQRVSEFFMNAKKNKPEWREEQMASIKKD----------YYKAL 73
+M+ + L +NA+D+ EQ +E A +++ + E+++ S++K Y +AL
Sbjct: 7 KMQMLKLDKENALDRAEQ--AEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEAL 64
Query: 74 EDADEKVQLANQ 85
+DA EK++LA +
Sbjct: 65 KDAQEKLELAEK 76
>gi|63252896 tropomyosin 1 alpha chain isoform 3 [Homo sapiens]
Length = 284
Score = 33.9 bits (76), Expect = 0.029
Identities = 21/72 (29%), Positives = 42/72 (58%), Gaps = 12/72 (16%)
Query: 24 EMREMDLQVQNAMDQLEQRVSEFFMNAKKNKPEWREEQMASIKKD----------YYKAL 73
+M+ + L +NA+D+ EQ +E A +++ + E+++ S++K Y +AL
Sbjct: 7 KMQMLKLDKENALDRAEQ--AEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEAL 64
Query: 74 EDADEKVQLANQ 85
+DA EK++LA +
Sbjct: 65 KDAQEKLELAEK 76
>gi|27597085 tropomyosin 1 alpha chain isoform 5 [Homo sapiens]
Length = 284
Score = 33.9 bits (76), Expect = 0.029
Identities = 21/72 (29%), Positives = 42/72 (58%), Gaps = 12/72 (16%)
Query: 24 EMREMDLQVQNAMDQLEQRVSEFFMNAKKNKPEWREEQMASIKKD----------YYKAL 73
+M+ + L +NA+D+ EQ +E A +++ + E+++ S++K Y +AL
Sbjct: 7 KMQMLKLDKENALDRAEQ--AEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEAL 64
Query: 74 EDADEKVQLANQ 85
+DA EK++LA +
Sbjct: 65 KDAQEKLELAEK 76
>gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo
sapiens]
Length = 1939
Score = 33.9 bits (76), Expect = 0.029
Identities = 18/67 (26%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 18 LRDRFTEMREMDLQVQNAMDQLEQRVSEFFMNAKKNKPEWREEQMASIKKDYYKALEDAD 77
LR+++ E +E ++Q AM + V+++ + + + R E++ KK + L+DA+
Sbjct: 1347 LREQYEEEQEAKAELQRAMSKANSEVAQWRTKYETDAIQ-RTEELEEAKKKLAQRLQDAE 1405
Query: 78 EKVQLAN 84
E V+ N
Sbjct: 1406 EHVEAVN 1412
>gi|189083830 inhibitor of growth family, member 4 isoform 5 [Homo
sapiens]
Length = 225
Score = 33.1 bits (74), Expect = 0.050
Identities = 16/58 (27%), Positives = 32/58 (55%)
Query: 32 VQNAMDQLEQRVSEFFMNAKKNKPEWREEQMASIKKDYYKALEDADEKVQLANQIYDL 89
+ N ++++ +E+ +A+ E + + I++ Y K E D+KVQLA Q Y++
Sbjct: 11 LDNLKAEIDKLATEYMSSARSLSSEEKLALLKQIQEAYGKCKEFGDDKVQLAMQTYEM 68
>gi|114155140 tropomyosin 3 isoform 1 [Homo sapiens]
Length = 285
Score = 32.7 bits (73), Expect = 0.065
Identities = 21/72 (29%), Positives = 42/72 (58%), Gaps = 12/72 (16%)
Query: 24 EMREMDLQVQNAMDQLEQRVSEFFMNAKKNKPEWREEQMASIKKD----------YYKAL 73
+M+ + L +NA+D+ EQ +E +++K E+++A+++K Y +AL
Sbjct: 8 KMQMLKLDKENALDRAEQAEAEQKQAEERSKQ--LEDELAAMQKKLKGTEDELDKYSEAL 65
Query: 74 EDADEKVQLANQ 85
+DA EK++LA +
Sbjct: 66 KDAQEKLELAEK 77
>gi|31542661 transmembrane protein 57 [Homo sapiens]
Length = 664
Score = 32.7 bits (73), Expect = 0.065
Identities = 22/79 (27%), Positives = 47/79 (59%), Gaps = 7/79 (8%)
Query: 12 EQLPMDLRDRFTEMREMDLQVQNAMDQLE-QRVSEFFM---NAKKNKPEWREEQMAS--- 64
++L MD++ + ++RE++L+VQ E ++ +E M +A ++K + E +++
Sbjct: 518 KKLTMDMKVKEDQIRELELKVQELRKYKENEKDTEVLMSALSAMQDKTQHLENSLSAETR 577
Query: 65 IKKDYYKALEDADEKVQLA 83
IK D + AL DA ++++A
Sbjct: 578 IKLDLFSALGDAKRQLEIA 596
>gi|75677351 suppressor of defective silencing 3 [Homo sapiens]
Length = 328
Score = 32.3 bits (72), Expect = 0.084
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 10/90 (11%)
Query: 5 EDYLEMIEQLPMD----LRDRFTEMREMDLQ-VQNAMDQLEQRVSEFFMNAK---KNKPE 56
EDY+EM EQ+ D L+ + +++E LQ Q M +L+Q+ E NA+ + + E
Sbjct: 63 EDYVEMKEQMYQDKLASLKRQLQQLQEGTLQEYQKRMKKLDQQYKERIRNAELFLQLETE 122
Query: 57 WREEQMASIKKDYYKALEDADEKVQLANQI 86
E KK K E D+KV+L +
Sbjct: 123 QVERNYIKEKKAAVKEFE--DKKVELKENL 150
>gi|110611903 myosin, heavy polypeptide 4, skeletal muscle [Homo
sapiens]
Length = 1939
Score = 32.3 bits (72), Expect = 0.084
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 18 LRDRFTEMREMDLQVQNAMDQLEQRVSEFFMNAKKNKPEWREEQMASIKKDYYKALEDAD 77
LR+++ E +E ++Q M + V+++ + + + R E++ KK + L+DA+
Sbjct: 1347 LREQYEEEQEAKAELQRGMSKANSEVAQWRTKYETDAIQ-RTEELEEAKKKLAQRLQDAE 1405
Query: 78 EKVQLAN 84
E V+ N
Sbjct: 1406 EHVEAVN 1412
>gi|21735548 centrosomal protein 2 [Homo sapiens]
Length = 2442
Score = 32.0 bits (71), Expect = 0.11
Identities = 19/55 (34%), Positives = 27/55 (49%)
Query: 7 YLEMIEQLPMDLRDRFTEMREMDLQVQNAMDQLEQRVSEFFMNAKKNKPEWREEQ 61
Y E ++QL L R E+R + Q L QRV E + K+N + REE+
Sbjct: 2033 YQEDVQQLQQALAQRDEELRHQQEREQLLEKSLAQRVQENMIQEKQNLGQEREEE 2087
>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
Length = 2230
Score = 32.0 bits (71), Expect = 0.11
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 12/78 (15%)
Query: 9 EMIEQLPMDLRDRFTEMREMDLQVQNAMDQLEQRVSEFFMNAKKNKPEWREEQMASIKKD 68
+ + ++ +D TE+ +QVQ+ M QLE++ SE E+++ S+ +
Sbjct: 840 KQVAEVEAQKKDVCTELDAHKIQVQDLMQQLEKQNSEM------------EQKVKSLTQV 887
Query: 69 YYKALEDADEKVQLANQI 86
Y LED +++ + QI
Sbjct: 888 YESKLEDGNKEQEQTKQI 905
Score = 26.6 bits (57), Expect = 4.6
Identities = 17/80 (21%), Positives = 41/80 (51%), Gaps = 10/80 (12%)
Query: 12 EQLPMDLRDRFTEMREMDLQV----QNAMDQLEQRVSEFFMNAKKNKPEW------REEQ 61
++L M +++ + +E++ ++ Q +QL ++++E + K+ + REE+
Sbjct: 2010 QELEMTIKETINKAQEVEAELLESHQEETNQLLKKIAEKDDDLKRTAKRYEEILDAREEE 2069
Query: 62 MASIKKDYYKALEDADEKVQ 81
M + +D LE+ +K Q
Sbjct: 2070 MTAKVRDLQTQLEELQKKYQ 2089
>gi|36031016 CTCL tumor antigen L14-2 [Homo sapiens]
Length = 898
Score = 31.6 bits (70), Expect = 0.14
Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 11 IEQLPMDLRDRFTEMREMDLQVQNAMDQLEQRVSEFFMNAKKNKPEWREEQMASIKK--- 67
IE+L +++ ++ D+ +NA+ QL + +++ A K E R+E+ A + K
Sbjct: 258 IEELNKEVKASRDQLIAQDVTAKNAVQQLHKEMAQRMEQANKKCEEARQEKEAMVMKYVR 317
Query: 68 ------DYYKALEDADEKVQLANQ 85
D K E ++K++ AN+
Sbjct: 318 GEKESLDLRKEKETLEKKLRDANK 341
Score = 29.3 bits (64), Expect = 0.72
Identities = 17/75 (22%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 17 DLRDRFTEMREMDLQVQNAMDQLEQRVSEFFMNAKKNKPEWREEQMAS------IKKDYY 70
+LR+ + E + Q N + QLE R+ E K ++ + + + + + K+
Sbjct: 232 NLREELKKRTETEKQHMNTIKQLESRIEELNKEVKASRDQLIAQDVTAKNAVQQLHKEMA 291
Query: 71 KALEDADEKVQLANQ 85
+ +E A++K + A Q
Sbjct: 292 QRMEQANKKCEEARQ 306
>gi|239748549 PREDICTED: hypothetical protein LOC100129791 [Homo
sapiens]
Length = 338
Score = 30.4 bits (67), Expect = 0.32
Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 16 MDLRDRFTEMREMDLQVQNAMDQLEQRVS--EFFMNAKKNKPEWREEQM 62
M+L+ + E+RE +++ DQLE+RVS E MN K + + RE+++
Sbjct: 91 MELKTKARELREECRSLRSRCDQLEERVSAMEDEMNEMKQEGKVREKRI 139
>gi|239742533 PREDICTED: hypothetical protein LOC100129791 [Homo
sapiens]
Length = 338
Score = 30.4 bits (67), Expect = 0.32
Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 16 MDLRDRFTEMREMDLQVQNAMDQLEQRVS--EFFMNAKKNKPEWREEQM 62
M+L+ + E+RE +++ DQLE+RVS E MN K + + RE+++
Sbjct: 91 MELKTKARELREECRSLRSRCDQLEERVSAMEDEMNEMKQEGKVREKRI 139
>gi|156104908 myosin heavy chain 6 [Homo sapiens]
Length = 1939
Score = 30.4 bits (67), Expect = 0.32
Identities = 16/67 (23%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 18 LRDRFTEMREMDLQVQNAMDQLEQRVSEFFMNAKKNKPEWREEQMASIKKDYYKALEDAD 77
LR+++ E E ++Q + + V+++ + + + R E++ KK + L+DA+
Sbjct: 1345 LREQYEEETEAKAELQRVLSKANSEVAQWRTKYETDAIQ-RTEELEEAKKKLAQRLQDAE 1403
Query: 78 EKVQLAN 84
E V+ N
Sbjct: 1404 EAVEAVN 1410
>gi|8922950 meiosis-specific nuclear structural 1 [Homo sapiens]
Length = 495
Score = 29.3 bits (64), Expect = 0.72
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 6 DYLEMIEQLPMDLRDRFTEMREMDLQVQNAMDQLEQRVSEFFMNAKKNKPEWREEQMASI 65
++ M +Q D + E E LQ+QNA+ Q + + + ++ + E +E+ A I
Sbjct: 272 EFANMQQQREEDRMAKVQENEEKRLQLQNALTQKLEEMLRQREDLEQVRQELYQEEQAEI 331
Query: 66 KKDYYKALEDADEKVQ 81
K K E+A++K++
Sbjct: 332 YKS--KLKEEAEKKLR 345
>gi|64085252 hypothetical protein LOC145508 [Homo sapiens]
Length = 1094
Score = 29.3 bits (64), Expect = 0.72
Identities = 20/77 (25%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 18 LRDRFTEMREMDLQVQNAMDQLEQRVSEFFMNAK-----KNKPEWREEQMASIKKDYYKA 72
LRD + +++L+V+N++D + + SE +K K + EE++A +KK
Sbjct: 567 LRDIKSHQADLELEVKNSLDTIHRLESELKKQSKIQSQMKVEKAHLEEEIAELKK---SQ 623
Query: 73 LEDADEKVQLANQIYDL 89
+D + +++ I DL
Sbjct: 624 AQDKAKLLEMQESIKDL 640
Score = 26.9 bits (58), Expect = 3.5
Identities = 21/87 (24%), Positives = 42/87 (48%), Gaps = 19/87 (21%)
Query: 4 LEDYLEMIEQLPMDLRDRFTEMREMDLQVQNAMDQLEQRVSEFFMNAKKNKPEWREEQMA 63
LE ++L +L E +++ L+ Q DQLE+R E+
Sbjct: 754 LEKLKSQCDRLTEELTQNENENKKLKLKYQCLKDQLEER-----------------EKHI 796
Query: 64 SIKKDYYKALEDADEKVQLANQIYDLQ 90
SI++++ + +E+A ++QL +Q+ L+
Sbjct: 797 SIEEEHLRRMEEA--RLQLKDQLLCLE 821
>gi|157419140 laminin, gamma 2 isoform b precursor [Homo sapiens]
Length = 1111
Score = 28.9 bits (63), Expect = 0.93
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Query: 25 MREMDLQVQNAMDQLEQRVSEFFMNAKK-----NKPEWREEQMASIKKDYYKALEDADEK 79
+RE DLQV N + E+ + ++K +K + E + S D +A A E
Sbjct: 955 LREFDLQVDNRKAEAEEAMKRLSYISQKVSDASDKTQQAERALGSAAADAQRAKNGAGEA 1014
Query: 80 VQLANQI 86
++++++I
Sbjct: 1015 LEISSEI 1021
>gi|157419138 laminin, gamma 2 isoform a precursor [Homo sapiens]
Length = 1193
Score = 28.9 bits (63), Expect = 0.93
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Query: 25 MREMDLQVQNAMDQLEQRVSEFFMNAKK-----NKPEWREEQMASIKKDYYKALEDADEK 79
+RE DLQV N + E+ + ++K +K + E + S D +A A E
Sbjct: 955 LREFDLQVDNRKAEAEEAMKRLSYISQKVSDASDKTQQAERALGSAAADAQRAKNGAGEA 1014
Query: 80 VQLANQI 86
++++++I
Sbjct: 1015 LEISSEI 1021
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.132 0.367
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,880,837
Number of Sequences: 37866
Number of extensions: 101550
Number of successful extensions: 810
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 64
Number of HSP's that attempted gapping in prelim test: 745
Number of HSP's gapped (non-prelim): 136
length of query: 92
length of database: 18,247,518
effective HSP length: 63
effective length of query: 29
effective length of database: 15,861,960
effective search space: 459996840
effective search space used: 459996840
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.