Guide to the Human Genome
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Name: RAP1A Sequence: fasta or formatted (184aa) NCBI GI: 58331202
Description:

RAP1A, member of RAS oncogene family

Referenced in:

Ras

Other entries for this name:
alt mRNA [184aa] RAP1A, member of RAS oncogene family
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.3          8           1
 C cysteine            3.3          6           1
 D aspartate           6.5         12           1
 E glutamate           7.6         14           1
 F phenylalanine       3.8          7           1
 G glycine             6.0         11           2
 H histidine           0.0          0           0
 I isoleucine          4.9          9           1
 K lysine              9.2         17           3
 L leucine             9.8         18           3
 M methionine          2.7          5           1
 N asparagine          4.3          8           1
 P proline             2.2          4           1
 Q glutamine           7.6         14           2
 R arginine            4.9          9           1
 S serine              4.9          9           2
 T threonine           4.9          9           1
 V valine              9.2         17           2
 W tryptophan          0.5          1           1
 Y tyrosine            3.3          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RAP1A, member of RAS oncogene family 
RAP1A                 1.000   RAP1A, member of RAS oncogene family 
RAP1B                 0.930   RAP1B, member of RAS oncogene family 
RAP1B                 0.930   RAP1B, member of RAS oncogene family 
RAP2A                 0.587   RAP2A, member of RAS oncogene family 
RAP2C                 0.578   RAP2C, member of RAS oncogene family 
RAP2B                 0.576   RAP2B, member of RAS oncogene family 
KRAS                  0.515   c-K-ras2 protein isoform b precursor 
KRAS                  0.509   c-K-ras2 protein isoform a precursor 
HRAS                  0.491   v-Ha-ras Harvey rat sarcoma viral oncogene homolog ...
HRAS                  0.491   v-Ha-ras Harvey rat sarcoma viral oncogene homolog is...
NRAS                  0.477   neuroblastoma RAS viral (v-ras) oncogene homolog [Hom...
RRAS2                 0.468   related RAS viral (r-ras) oncogene homolog 2 isoform...
MRAS                  0.456   muscle RAS oncogene homolog 
MRAS                  0.456   muscle RAS oncogene homolog 
RALA                  0.456   ras related v-ral simian leukemia viral oncogene hom...
HRAS                  0.451   v-Ha-ras Harvey rat sarcoma viral oncogene homolog i...
RIT1                  0.442   Ras-like without CAAX 1 
RIT2                  0.430   Ras-like without CAAX 2 
RALB                  0.424   v-ral simian leukemia viral oncogene homolog B 
RRAS                  0.413   related RAS viral (r-ras) oncogene homolog 
DIRAS2                0.381   Di-Ras2 
DIRAS1                0.355   DIRAS family, GTP-binding RAS-like 1 
LOC100133211          0.346   PREDICTED: similar to related RAS viral (r-ras) onc...
LOC100133211          0.346   PREDICTED: similar to related RAS viral (r-ras) onc...
LOC100133211          0.346   PREDICTED: similar to related RAS viral (r-ras) onc...
RERG                  0.340   RAS-like, estrogen-regulated, growth inhibitor [Homo...
RHEB                  0.299   Ras homolog enriched in brain 
RAB12                 0.262   RAB12, member RAS oncogene family 
RHEBL1                0.259   Ras homolog enriched in brain like 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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