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Search of human proteins with 37675377
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|37675377 dendritic cell-associated C-type lectin 1 isoform d
[Homo sapiens]
(143 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|37675377 dendritic cell-associated C-type lectin 1 isoform d ... 298 1e-81
gi|37675375 dendritic cell-associated C-type lectin 1 isoform c ... 276 5e-75
gi|13384604 dendritic cell-associated C-type lectin 1 isoform b ... 246 5e-66
gi|37675373 dendritic cell-associated C-type lectin 1 isoform a ... 224 2e-59
gi|37675379 dendritic cell-associated C-type lectin 1 isoform e ... 166 6e-42
gi|37675387 dendritic cell-associated C-type lectin 1 isoform f ... 137 4e-33
gi|153252029 C-type lectin domain family 1, member B isoform a [... 61 4e-10
gi|47717092 killer cell lectin-like receptor subfamily C, member... 57 5e-09
gi|7262384 killer cell lectin-like receptor subfamily C, member ... 57 5e-09
gi|153252048 C-type lectin domain family 1, member B isoform b [... 54 4e-08
gi|75709169 killer cell lectin-like receptor subfamily C, member... 54 6e-08
gi|168229214 C-type lectin domain family 2, member L [Homo sapiens] 52 2e-07
gi|4505501 oxidized low density lipoprotein (lectin-like) recept... 52 2e-07
gi|47717094 killer cell lectin-like receptor subfamily C, member... 51 4e-07
gi|4504881 killer cell lectin-like receptor subfamily C, member ... 51 4e-07
gi|75709175 killer cell lectin-like receptor subfamily C, member... 50 5e-07
gi|75709177 killer cell lectin-like receptor subfamily C, member... 50 5e-07
gi|94557290 myeloid inhibitory C-type lectin-like receptor isofo... 50 8e-07
gi|94557293 myeloid inhibitory C-type lectin-like receptor isofo... 50 8e-07
gi|46409326 C-type lectin domain family 9, member A [Homo sapiens] 49 1e-06
gi|4502683 CD72 molecule [Homo sapiens] 48 2e-06
gi|52426782 osteoclast inhibitory lectin isoform 2 [Homo sapiens] 47 5e-06
gi|7019447 osteoclast inhibitory lectin isoform 1 [Homo sapiens] 47 5e-06
gi|38348332 killer cell lectin-like receptor subfamily G, member... 47 7e-06
gi|169234653 NKG2-D type II integral membrane protein [Homo sapi... 46 9e-06
gi|7710124 killer cell lectin-like receptor subfamily C, member ... 46 1e-05
gi|4502681 CD69 molecule [Homo sapiens] 45 2e-05
gi|7657333 C-type lectin domain family 4, member E [Homo sapiens] 45 3e-05
gi|37577119 C-type lectin domain family 4, member A isoform 2 [H... 44 4e-05
gi|223029388 CD209 molecule isoform 4 [Homo sapiens] 43 8e-05
>gi|37675377 dendritic cell-associated C-type lectin 1 isoform d
[Homo sapiens]
Length = 143
Score = 298 bits (762), Expect = 1e-81
Identities = 143/143 (100%), Positives = 143/143 (100%)
Query: 1 MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKGSCAASPPWRLIAVILGILCLVILVI 60
MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKGSCAASPPWRLIAVILGILCLVILVI
Sbjct: 1 MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKGSCAASPPWRLIAVILGILCLVILVI 60
Query: 61 AVVLGTMGVLSSPCPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELIS 120
AVVLGTMGVLSSPCPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELIS
Sbjct: 61 AVVLGTMGVLSSPCPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELIS 120
Query: 121 DQNHSYPRKPISKLCMDSRVSHL 143
DQNHSYPRKPISKLCMDSRVSHL
Sbjct: 121 DQNHSYPRKPISKLCMDSRVSHL 143
>gi|37675375 dendritic cell-associated C-type lectin 1 isoform c
[Homo sapiens]
Length = 189
Score = 276 bits (705), Expect = 5e-75
Identities = 143/189 (75%), Positives = 143/189 (75%), Gaps = 46/189 (24%)
Query: 1 MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKGSCAASPPWRLIAVILGILCLVILVI 60
MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKGSCAASPPWRLIAVILGILCLVILVI
Sbjct: 1 MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKGSCAASPPWRLIAVILGILCLVILVI 60
Query: 61 AVVLGTM----------------------------------------------GVLSSPC 74
AVVLGTM GVLSSPC
Sbjct: 61 AVVLGTMAIWRSNSGSNTLENGYFLSRNKENHSQPTQSSLEDSVTPTKAVKTTGVLSSPC 120
Query: 75 PPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELISDQNHSYPRKPISKL 134
PPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELISDQNHSYPRKPISKL
Sbjct: 121 PPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELISDQNHSYPRKPISKL 180
Query: 135 CMDSRVSHL 143
CMDSRVSHL
Sbjct: 181 CMDSRVSHL 189
>gi|13384604 dendritic cell-associated C-type lectin 1 isoform b
[Homo sapiens]
Length = 201
Score = 246 bits (628), Expect = 5e-66
Identities = 118/118 (100%), Positives = 118/118 (100%)
Query: 1 MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKGSCAASPPWRLIAVILGILCLVILVI 60
MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKGSCAASPPWRLIAVILGILCLVILVI
Sbjct: 1 MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKGSCAASPPWRLIAVILGILCLVILVI 60
Query: 61 AVVLGTMGVLSSPCPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNEL 118
AVVLGTMGVLSSPCPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNEL
Sbjct: 61 AVVLGTMGVLSSPCPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNEL 118
>gi|37675373 dendritic cell-associated C-type lectin 1 isoform a
[Homo sapiens]
Length = 247
Score = 224 bits (571), Expect = 2e-59
Identities = 118/164 (71%), Positives = 118/164 (71%), Gaps = 46/164 (28%)
Query: 1 MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKGSCAASPPWRLIAVILGILCLVILVI 60
MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKGSCAASPPWRLIAVILGILCLVILVI
Sbjct: 1 MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKGSCAASPPWRLIAVILGILCLVILVI 60
Query: 61 AVVLGTM----------------------------------------------GVLSSPC 74
AVVLGTM GVLSSPC
Sbjct: 61 AVVLGTMAIWRSNSGSNTLENGYFLSRNKENHSQPTQSSLEDSVTPTKAVKTTGVLSSPC 120
Query: 75 PPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNEL 118
PPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNEL
Sbjct: 121 PPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNEL 164
>gi|37675379 dendritic cell-associated C-type lectin 1 isoform e
[Homo sapiens]
Length = 168
Score = 166 bits (420), Expect = 6e-42
Identities = 85/118 (72%), Positives = 85/118 (72%), Gaps = 33/118 (27%)
Query: 1 MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKGSCAASPPWRLIAVILGILCLVILVI 60
MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKG
Sbjct: 1 MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKG------------------------- 35
Query: 61 AVVLGTMGVLSSPCPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNEL 118
VLSSPCPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNEL
Sbjct: 36 --------VLSSPCPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNEL 85
>gi|37675387 dendritic cell-associated C-type lectin 1 isoform f
[Homo sapiens]
Length = 77
Score = 137 bits (344), Expect = 4e-33
Identities = 67/67 (100%), Positives = 67/67 (100%)
Query: 1 MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKGSCAASPPWRLIAVILGILCLVILVI 60
MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKGSCAASPPWRLIAVILGILCLVILVI
Sbjct: 1 MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKGSCAASPPWRLIAVILGILCLVILVI 60
Query: 61 AVVLGTM 67
AVVLGTM
Sbjct: 61 AVVLGTM 67
>gi|153252029 C-type lectin domain family 1, member B isoform a
[Homo sapiens]
Length = 229
Score = 60.8 bits (146), Expect = 4e-10
Identities = 47/157 (29%), Positives = 66/157 (42%), Gaps = 48/157 (30%)
Query: 11 DEDGYTQLHFDSQSNTRIAVVSEKGSCAASPPWRLIAVILGILCLVILVIAVVLGTMGVL 70
DEDGY L+ ++ I+V S A+S WR++A+IL ILC+ ++V V LG V+
Sbjct: 3 DEDGYITLNIKTRKPALISVGS-----ASSSWWRVMALILLILCVGMVVGLVALGIWSVM 57
Query: 71 S-----------------------------------------SPCPPNWIIYEKSCYLFS 89
SPC NW Y SCY F
Sbjct: 58 QRNYLQGENENRTGTLQQLAKRFCQYVVKQSELKGTFKGHKCSPCDTNWRYYGDSCYGFF 117
Query: 90 MSLNSWDGSKRQCWQLGSNLLKIDSSN--ELISDQNH 124
+W+ SK+ C + + LLKID+ N E I + H
Sbjct: 118 RHNLTWEESKQYCTDMNATLLKIDNRNIVEYIKARTH 154
>gi|47717092 killer cell lectin-like receptor subfamily C, member 1
isoform NKG2-B [Homo sapiens]
Length = 215
Score = 57.0 bits (136), Expect = 5e-09
Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 40 SPPWRLIAVILGILCLVILVIAVVLGTMGVLSSP----CPPNWIIYEKSCYLFSMSLNSW 95
S P +LI ILGI+CL+++ V T+ V+ S CP WI Y SCY +W
Sbjct: 66 SAPEKLIVGILGIICLILMASVV---TIVVIPSRHCGHCPEEWITYSNSCYYIGKERRTW 122
Query: 96 DGSKRQCWQLGSNLLKIDSSNEL 118
+ S C S+LL ID+ E+
Sbjct: 123 EESLLACTSKNSSLLSIDNEEEM 145
>gi|7262384 killer cell lectin-like receptor subfamily C, member 1
isoform NKG2-B [Homo sapiens]
Length = 215
Score = 57.0 bits (136), Expect = 5e-09
Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 40 SPPWRLIAVILGILCLVILVIAVVLGTMGVLSSP----CPPNWIIYEKSCYLFSMSLNSW 95
S P +LI ILGI+CL+++ V T+ V+ S CP WI Y SCY +W
Sbjct: 66 SAPEKLIVGILGIICLILMASVV---TIVVIPSRHCGHCPEEWITYSNSCYYIGKERRTW 122
Query: 96 DGSKRQCWQLGSNLLKIDSSNEL 118
+ S C S+LL ID+ E+
Sbjct: 123 EESLLACTSKNSSLLSIDNEEEM 145
>gi|153252048 C-type lectin domain family 1, member B isoform b
[Homo sapiens]
Length = 196
Score = 53.9 bits (128), Expect = 4e-08
Identities = 36/119 (30%), Positives = 55/119 (46%), Gaps = 5/119 (4%)
Query: 11 DEDGYTQLHFDSQSNTRIAVVSEKGSCAASPPWRL--IAVILGILCLVILVIAVVLGTM- 67
DEDGY L+ ++ I+ V ++ R + + C ++ + + GT
Sbjct: 3 DEDGYITLNIKTRKPALISAVMQRNYLQGENENRTGTLQQLAKRFCQYVVKQSELKGTFK 62
Query: 68 GVLSSPCPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSN--ELISDQNH 124
G SPC NW Y SCY F +W+ SK+ C + + LLKID+ N E I + H
Sbjct: 63 GHKCSPCDTNWRYYGDSCYGFFRHNLTWEESKQYCTDMNATLLKIDNRNIVEYIKARTH 121
>gi|75709169 killer cell lectin-like receptor subfamily C, member 2
[Homo sapiens]
Length = 231
Score = 53.5 bits (127), Expect = 6e-08
Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 21/97 (21%)
Query: 41 PPWRLIAVILGILCLVILVIAVVLGTMGVLS-------SP------------CPPNWIIY 81
PP +L A +LGI+C+V++ A VL T+ ++ SP CP WI Y
Sbjct: 67 PPEKLTAEVLGIICIVLM--ATVLKTIVLIPFLEQNNFSPNTRTQKARHCGHCPEEWITY 124
Query: 82 EKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNEL 118
SCY +W+ S C S+LL ID+ E+
Sbjct: 125 SNSCYYIGKERRTWEESLLACTSKNSSLLSIDNEEEM 161
>gi|168229214 C-type lectin domain family 2, member L [Homo sapiens]
Length = 214
Score = 52.0 bits (123), Expect = 2e-07
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 44 RLIAVILGILCLVILVIAVVLGTMGVLS--SPCPPNWIIYEKSCYLFSMSLNSWDGSKRQ 101
RL+ + +L ILV+ +L + G + +PCP +W++Y + CY FS W+ ++
Sbjct: 68 RLLLGAIAVLLFAILVVMSILASKGCIKCEAPCPEDWLLYGRKCYFFSEEPRDWNTGRQY 127
Query: 102 CWQLGSNLLKIDSSNEL 118
C + L I S EL
Sbjct: 128 CHTHEAVLAVIQSQKEL 144
>gi|4505501 oxidized low density lipoprotein (lectin-like) receptor
1 [Homo sapiens]
Length = 273
Score = 51.6 bits (122), Expect = 2e-07
Identities = 21/48 (43%), Positives = 34/48 (70%)
Query: 71 SSPCPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNEL 118
S+PCP +WI + ++CYLFS +W+ S+ +C L + LLKI+S+ +L
Sbjct: 141 SAPCPQDWIWHGENCYLFSSGSFNWEKSQEKCLSLDAKLLKINSTADL 188
Score = 30.8 bits (68), Expect = 0.40
Identities = 14/26 (53%), Positives = 18/26 (69%)
Query: 40 SPPWRLIAVILGILCLVILVIAVVLG 65
SP W L A LG+LCL ++V +VLG
Sbjct: 32 SPWWCLAAATLGVLCLGLVVTIMVLG 57
>gi|47717094 killer cell lectin-like receptor subfamily C, member 1
isoform NKG2-A [Homo sapiens]
Length = 233
Score = 50.8 bits (120), Expect = 4e-07
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 19/98 (19%)
Query: 40 SPPWRLIAVILGILCLVIL--VIAVVLGTMGVLS-----------------SPCPPNWII 80
S P +LI ILGI+CL+++ V+ +V+ ++ CP WI
Sbjct: 66 SAPEKLIVGILGIICLILMASVVTIVVIPSTLIQRHNNSSLNTRTQKARHCGHCPEEWIT 125
Query: 81 YEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNEL 118
Y SCY +W+ S C S+LL ID+ E+
Sbjct: 126 YSNSCYYIGKERRTWEESLLACTSKNSSLLSIDNEEEM 163
>gi|4504881 killer cell lectin-like receptor subfamily C, member 1
isoform NKG2-A [Homo sapiens]
Length = 233
Score = 50.8 bits (120), Expect = 4e-07
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 19/98 (19%)
Query: 40 SPPWRLIAVILGILCLVIL--VIAVVLGTMGVLS-----------------SPCPPNWII 80
S P +LI ILGI+CL+++ V+ +V+ ++ CP WI
Sbjct: 66 SAPEKLIVGILGIICLILMASVVTIVVIPSTLIQRHNNSSLNTRTQKARHCGHCPEEWIT 125
Query: 81 YEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNEL 118
Y SCY +W+ S C S+LL ID+ E+
Sbjct: 126 YSNSCYYIGKERRTWEESLLACTSKNSSLLSIDNEEEM 163
>gi|75709175 killer cell lectin-like receptor subfamily C, member 3
isoform E [Homo sapiens]
Length = 240
Score = 50.4 bits (119), Expect = 5e-07
Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 22/98 (22%)
Query: 41 PPWRLIAVILGILCLVILVIAVVLGTMGVL-------SSP------------CPPNWIIY 81
PP +L A +LGI+C+V++ A VL T+ ++ SSP CP WI Y
Sbjct: 67 PPEKLTAEVLGIICIVLM--ATVLKTIVLIPFLEQNNSSPNARTQKARHCGHCPEEWITY 124
Query: 82 EKSCYLFSMSLNSWDGSKRQC-WQLGSNLLKIDSSNEL 118
SCY +W+ S + C + S+LL ID+ E+
Sbjct: 125 SNSCYYIGKERRTWEESLQACASKNSSSLLCIDNEEEM 162
>gi|75709177 killer cell lectin-like receptor subfamily C, member 3
isoform H [Homo sapiens]
Length = 257
Score = 50.4 bits (119), Expect = 5e-07
Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 22/98 (22%)
Query: 41 PPWRLIAVILGILCLVILVIAVVLGTMGVL-------SSP------------CPPNWIIY 81
PP +L A +LGI+C+V++ A VL T+ ++ SSP CP WI Y
Sbjct: 67 PPEKLTAEVLGIICIVLM--ATVLKTIVLIPFLEQNNSSPNARTQKARHCGHCPEEWITY 124
Query: 82 EKSCYLFSMSLNSWDGSKRQC-WQLGSNLLKIDSSNEL 118
SCY +W+ S + C + S+LL ID+ E+
Sbjct: 125 SNSCYYIGKERRTWEESLQACASKNSSSLLCIDNEEEM 162
>gi|94557290 myeloid inhibitory C-type lectin-like receptor isoform
alpha [Homo sapiens]
Length = 265
Score = 49.7 bits (117), Expect = 8e-07
Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 73 PCPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSN--ELISDQNHSY 126
PCP WI ++ SCY S + +W SK C ++LLKI++ N E I Q+ SY
Sbjct: 132 PCPRRWIWHKDSCYFLSDDVQTWQESKMACAAQNASLLKINNKNALEFIKSQSRSY 187
Score = 32.3 bits (72), Expect = 0.14
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Query: 11 DEDGYTQLHFDSQSNTR----IAVVSEKGSCAASPPWRLIAVILGILCLVILVIAVVLGT 66
+E Y L F + S I EK A S WR A+ L +LCL++L+ VL +
Sbjct: 3 EEVTYADLQFQNSSEMEKIPEIGKFGEKAPPAPSHVWRPAALFLTLLCLLLLIGLGVLAS 62
Query: 67 M 67
M
Sbjct: 63 M 63
>gi|94557293 myeloid inhibitory C-type lectin-like receptor isoform
beta [Homo sapiens]
Length = 232
Score = 49.7 bits (117), Expect = 8e-07
Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 73 PCPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSN--ELISDQNHSY 126
PCP WI ++ SCY S + +W SK C ++LLKI++ N E I Q+ SY
Sbjct: 99 PCPRRWIWHKDSCYFLSDDVQTWQESKMACAAQNASLLKINNKNALEFIKSQSRSY 154
>gi|46409326 C-type lectin domain family 9, member A [Homo sapiens]
Length = 241
Score = 48.9 bits (115), Expect = 1e-06
Identities = 22/48 (45%), Positives = 29/48 (60%)
Query: 71 SSPCPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNEL 118
SSPCP NWI +SCY S + W S+ C + GS LL+I+S E+
Sbjct: 110 SSPCPNNWIQNRESCYYVSEIWSIWHTSQENCLKEGSTLLQIESKEEM 157
>gi|4502683 CD72 molecule [Homo sapiens]
Length = 359
Score = 48.1 bits (113), Expect = 2e-06
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Query: 66 TMGVLSSPCPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELISDQNHS 125
T G + CP WI+++KSC+ S++ +W S++QC L S L I Q+HS
Sbjct: 225 TCGSADTCCPSGWIMHQKSCFYISLTSKNWQESQKQCETLSSKLATFSE----IYPQSHS 280
Query: 126 Y 126
Y
Sbjct: 281 Y 281
>gi|52426782 osteoclast inhibitory lectin isoform 2 [Homo sapiens]
Length = 194
Score = 47.0 bits (110), Expect = 5e-06
Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 32 SEKGSCAASPPWRLIAVILGILCLVILVIAVVLGTMG--------VLSSPCPPNWIIYEK 83
S++ S A+ WRL +I+ + +V ++A + L + CP +WI +++
Sbjct: 25 SKEHSIKATLIWRLFFLIMFLTIIVCGMVAALSAIRANCHQEPSVCLQAACPESWIGFQR 84
Query: 84 SCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNEL 118
C+ FS +W S+R C ++L +++S EL
Sbjct: 85 KCFYFSDDTKNWTSSQRFCDSQDADLAQVESFQEL 119
>gi|7019447 osteoclast inhibitory lectin isoform 1 [Homo sapiens]
Length = 191
Score = 47.0 bits (110), Expect = 5e-06
Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 32 SEKGSCAASPPWRLIAVILGILCLVILVIAVVLGTMG--------VLSSPCPPNWIIYEK 83
S++ S A+ WRL +I+ + +V ++A + L + CP +WI +++
Sbjct: 25 SKEHSIKATLIWRLFFLIMFLTIIVCGMVAALSAIRANCHQEPSVCLQAACPESWIGFQR 84
Query: 84 SCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNEL 118
C+ FS +W S+R C ++L +++S EL
Sbjct: 85 KCFYFSDDTKNWTSSQRFCDSQDADLAQVESFQEL 119
>gi|38348332 killer cell lectin-like receptor subfamily G, member 2
[Homo sapiens]
Length = 409
Score = 46.6 bits (109), Expect = 7e-06
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 43 WRL--IAVILGILCLVILVIAVVLGTMGVLSSPCPPNWIIYEKSCYLFSMSLNSWDGSKR 100
W L +AV+L + +VI+V+A G CPP W++ E+ CY FS +W+ S+
Sbjct: 263 WALAFMAVLLAVSGVVIVVLA---SRAGARCQQCPPGWVLSEEHCYYFSAEAQAWEASQA 319
Query: 101 QC 102
C
Sbjct: 320 FC 321
>gi|169234653 NKG2-D type II integral membrane protein [Homo
sapiens]
Length = 216
Score = 46.2 bits (108), Expect = 9e-06
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 14/105 (13%)
Query: 27 RIAVVSEKGSCAASPPWR--LIAVILGILCLVILVI--AVVLGTM----------GVLSS 72
R VV K ASP + IAV +GI ++++ I AV L ++
Sbjct: 38 RCPVVKSKCRENASPFFFCCFIAVAMGIRFIIMVTIWSAVFLNSLFNQEVQIPLTESYCG 97
Query: 73 PCPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNE 117
PCP NWI Y+ +CY F +W S+ C ++LLK+ S +
Sbjct: 98 PCPKNWICYKNNCYQFFDESKNWYESQASCMSQNASLLKVYSKED 142
>gi|7710124 killer cell lectin-like receptor subfamily C, member 4
[Homo sapiens]
Length = 158
Score = 45.8 bits (107), Expect = 1e-05
Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 22/83 (26%)
Query: 41 PPWRLIAVILGILCLVILVIA----VVLGTMGVLSSP----------------CPPNWII 80
PP +L A +LGI+C+V++ V++ +GVL CP WI
Sbjct: 67 PPEKLTAEVLGIICIVLMATVLKTIVLIPCIGVLEQNNFSLNRRMQKARHCGHCPEEWIT 126
Query: 81 YEKSCYLFSMSLNSWDGSKRQCW 103
Y SCY +W+ +R CW
Sbjct: 127 YSNSCYYIGKERRTWE--ERVCW 147
>gi|4502681 CD69 molecule [Homo sapiens]
Length = 199
Score = 45.4 bits (106), Expect = 2e-05
Identities = 20/89 (22%), Positives = 43/89 (48%), Gaps = 15/89 (16%)
Query: 45 LIAVILGILCLVILVIAVVLGTMGVLSSP---------------CPPNWIIYEKSCYLFS 89
++ ++ ++ + IL+IA++ ++G + P C +W+ Y++ CY S
Sbjct: 41 VLCAVMNVVFITILIIALIALSVGQYNCPGQYTFSMPSDSHVSSCSEDWVGYQRKCYFIS 100
Query: 90 MSLNSWDGSKRQCWQLGSNLLKIDSSNEL 118
SW ++ C + G+ L IDS ++
Sbjct: 101 TVKRSWTSAQNACSEHGATLAVIDSEKDM 129
>gi|7657333 C-type lectin domain family 4, member E [Homo sapiens]
Length = 219
Score = 44.7 bits (104), Expect = 3e-05
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 68 GVLSSPCPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNE 117
G + + CP NW ++ SCY FS SW S + C +G++L+ I+S E
Sbjct: 74 GSVKNCCPLNWEYFQSSCYFFSTDTISWALSLKNCSAMGAHLVVINSQEE 123
>gi|37577119 C-type lectin domain family 4, member A isoform 2 [Homo
sapiens]
Length = 204
Score = 44.3 bits (103), Expect = 4e-05
Identities = 26/110 (23%), Positives = 51/110 (46%), Gaps = 7/110 (6%)
Query: 15 YTQLHFDSQ-SNTRIAVVSEKGSCAASPPWRLIAVILGILCLVILVIAVVLGTMGVLS-- 71
Y ++ F ++ ++ I S S + P + +LC +L+ ++L ++
Sbjct: 7 YAEVRFKNEFKSSGINTASSAASKERTAPHKSNTGFPKLLCASLLIFFLLLAISFFIAFV 66
Query: 72 ----SPCPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNE 117
S CP NW + +CY S SW S++ C ++ ++LL I++ E
Sbjct: 67 KTAWSCCPKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLLVINTQEE 116
>gi|223029388 CD209 molecule isoform 4 [Homo sapiens]
Length = 398
Score = 43.1 bits (100), Expect = 8e-05
Identities = 19/54 (35%), Positives = 28/54 (51%)
Query: 70 LSSPCPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELISDQN 123
L PCP W ++ +CY S S +W S C ++G+ L+ I S+ E S N
Sbjct: 252 LCHPCPWEWTFFQGNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQSSRSN 305
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.135 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,792,213
Number of Sequences: 37866
Number of extensions: 229027
Number of successful extensions: 900
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 114
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 735
Number of HSP's gapped (non-prelim): 153
length of query: 143
length of database: 18,247,518
effective HSP length: 92
effective length of query: 51
effective length of database: 14,763,846
effective search space: 752956146
effective search space used: 752956146
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.