Guide to the Human Genome
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Name: KLRC4 Sequence: fasta or formatted (158aa) NCBI GI: 7710124
Description:

killer cell lectin-like receptor subfamily C, member 4

Referenced in:

Lectin Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.2          5           1
 C cysteine            5.1          8           1
 D aspartate           1.9          3           1
 E glutamate           7.0         11           2
 F phenylalanine       1.9          3           1
 G glycine             5.7          9           1
 H histidine           2.5          4           1
 I isoleucine          7.6         12           2
 K lysine              7.6         12           1
 L leucine            10.1         16           2
 M methionine          1.9          3           1
 N asparagine          5.7          9           2
 P proline             4.4          7           3
 Q glutamine           6.3         10           2
 R arginine            7.0         11           2
 S serine              5.7          9           2
 T threonine           5.7          9           1
 V valine              5.7          9           1
 W tryptophan          1.9          3           1
 Y tyrosine            3.2          5           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   killer cell lectin-like receptor subfamily C, member ... 
KLRC2                 0.739   killer cell lectin-like receptor subfamily C, member...
KLRC3                 0.722   killer cell lectin-like receptor subfamily C, member...
KLRC3                 0.722   killer cell lectin-like receptor subfamily C, member...
KLRC1                 0.562   killer cell lectin-like receptor subfamily C, member...
KLRC1                 0.562   killer cell lectin-like receptor subfamily C, member ...
KLRC1                 0.480   killer cell lectin-like receptor subfamily C, member...
KLRC1                 0.480   killer cell lectin-like receptor subfamily C, member ...
KLRD1                 0.095   killer cell lectin-like receptor subfamily D, membe...
KLRD1                 0.095   killer cell lectin-like receptor subfamily D, member ...
CLEC7A                0.069   dendritic cell-associated C-type lectin 1 isoform d ...
CLEC7A                0.069   dendritic cell-associated C-type lectin 1 isoform b ...
KLRK1                 0.059   NKG2-D type II integral membrane protein 
KLRG1                 0.059   killer cell lectin-like receptor subfamily G, member...
KLRD1                 0.056   killer cell lectin-like receptor subfamily D, member ...
CLEC7A                0.049   dendritic cell-associated C-type lectin 1 isoform c ...
CLEC7A                0.049   dendritic cell-associated C-type lectin 1 isoform a ...
CLEC4M                0.046   C-type lectin domain family 4, member M isoform 9 [...
CLEC4M                0.046   C-type lectin domain family 4, member M isoform 10 ...
CLEC4M                0.046   C-type lectin domain family 4, member M isoform 7 [...
CLEC4M                0.046   C-type lectin domain family 4, member M isoform 12 ...
CLEC4M                0.046   C-type lectin domain family 4, member M isoform 2 [...
FCER2                 0.046   Fc fragment of IgE, low affinity II, receptor for (C...
CLEC4M                0.046   C-type lectin domain family 4, member M isoform 3 [...
CLEC4M                0.046   C-type lectin domain family 4, member M isoform 8 [...
CLEC4M                0.046   C-type lectin domain family 4, member M isoform 11 ...
CLEC4M                0.046   C-type lectin domain family 4, member M isoform 1 [H...
CD69                  0.042   CD69 molecule 
CLEC12A               0.039   myeloid inhibitory C-type lectin-like receptor isofo...
CLEC12A               0.039   myeloid inhibitory C-type lectin-like receptor isofo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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