BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|37655183 N-myc downstream regulated 1 [Homo sapiens] (394 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|207028748 N-myc downstream regulated 1 [Homo sapiens] 802 0.0 gi|37655183 N-myc downstream regulated 1 [Homo sapiens] 802 0.0 gi|14165266 N-myc downstream-regulated gene 3 isoform a [Homo sa... 481 e-136 gi|32130514 N-myc downstream-regulated gene 3 isoform b [Homo sa... 469 e-132 gi|194440722 NDRG family member 4 isoform 2 [Homo sapiens] 445 e-125 gi|13430864 NDRG family member 4 isoform 1 [Homo sapiens] 445 e-125 gi|14165264 NDRG family member 4 isoform 1 [Homo sapiens] 445 e-125 gi|42544224 N-myc downstream-regulated gene 2 isoform b [Homo sa... 399 e-111 gi|42544222 N-myc downstream-regulated gene 2 isoform a [Homo sa... 399 e-111 gi|42544220 N-myc downstream-regulated gene 2 isoform a [Homo sa... 399 e-111 gi|42544218 N-myc downstream-regulated gene 2 isoform b [Homo sa... 399 e-111 gi|42544216 N-myc downstream-regulated gene 2 isoform a [Homo sa... 399 e-111 gi|10280620 N-myc downstream-regulated gene 2 isoform b [Homo sa... 399 e-111 gi|42544213 N-myc downstream-regulated gene 2 isoform b [Homo sa... 399 e-111 gi|42544211 N-myc downstream-regulated gene 2 isoform a [Homo sa... 399 e-111 gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens] 35 0.12 gi|23200008 abhydrolase domain containing 11 isoform 1 [Homo sap... 35 0.12 gi|23200012 abhydrolase domain containing 11 isoform 2 [Homo sap... 35 0.12 gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens] 35 0.15 gi|42741682 zinc finger protein 265 isoform 2 [Homo sapiens] 35 0.15 gi|148233596 LPS-responsive vesicle trafficking, beach and ancho... 34 0.20 gi|239742514 PREDICTED: similar to Putative POM121-like protein ... 34 0.26 gi|167234419 thyroid hormone receptor associated protein 3 [Homo... 33 0.34 gi|239742580 PREDICTED: similar to Putative POM121-like protein ... 33 0.45 gi|239740827 PREDICTED: hypothetical protein XP_002344067 [Homo ... 32 1.00 gi|116089325 splicing factor, arginine/serine-rich 12 isoform a ... 32 1.00 gi|21040255 splicing factor, arginine/serine-rich 12 isoform b [... 32 1.00 gi|20127499 arginine/serine-rich splicing factor 6 [Homo sapiens] 31 1.7 gi|151301154 mucin 6, gastric [Homo sapiens] 31 1.7 gi|55743106 alpha 3 type VI collagen isoform 5 precursor [Homo s... 31 2.2 >gi|207028748 N-myc downstream regulated 1 [Homo sapiens] Length = 394 Score = 802 bits (2072), Expect = 0.0 Identities = 394/394 (100%), Positives = 394/394 (100%) Query: 1 MSREMQDVDLAEVKPLVEKGETITGLLQEFDVQEQDIETLHGSVHVTLCGTPKGNRPVIL 60 MSREMQDVDLAEVKPLVEKGETITGLLQEFDVQEQDIETLHGSVHVTLCGTPKGNRPVIL Sbjct: 1 MSREMQDVDLAEVKPLVEKGETITGLLQEFDVQEQDIETLHGSVHVTLCGTPKGNRPVIL 60 Query: 61 TYHDIGMNHKTCYNPLFNYEDMQEITQHFAVCHVDAPGQQDGAASFPAGYMYPSMDQLAE 120 TYHDIGMNHKTCYNPLFNYEDMQEITQHFAVCHVDAPGQQDGAASFPAGYMYPSMDQLAE Sbjct: 61 TYHDIGMNHKTCYNPLFNYEDMQEITQHFAVCHVDAPGQQDGAASFPAGYMYPSMDQLAE 120 Query: 121 MLPGVLQQFGLKSIIGMGTGAGAYILTRFALNNPEMVEGLVLINVNPCAEGWMDWAASKI 180 MLPGVLQQFGLKSIIGMGTGAGAYILTRFALNNPEMVEGLVLINVNPCAEGWMDWAASKI Sbjct: 121 MLPGVLQQFGLKSIIGMGTGAGAYILTRFALNNPEMVEGLVLINVNPCAEGWMDWAASKI 180 Query: 181 SGWTQALPDMVVSHLFGKEEMQSNVEVVHTYRQHIVNDMNPGNLHLFINAYNSRRDLEIE 240 SGWTQALPDMVVSHLFGKEEMQSNVEVVHTYRQHIVNDMNPGNLHLFINAYNSRRDLEIE Sbjct: 181 SGWTQALPDMVVSHLFGKEEMQSNVEVVHTYRQHIVNDMNPGNLHLFINAYNSRRDLEIE 240 Query: 241 RPMPGTHTVTLQCPALLVVGDSSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQISQPAK 300 RPMPGTHTVTLQCPALLVVGDSSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQISQPAK Sbjct: 241 RPMPGTHTVTLQCPALLVVGDSSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQISQPAK 300 Query: 301 LAEAFKYFVQGMGYMPSASMTRLMRSRTASGSSVTSLDGTRSRSHTSEGTRSRSHTSEGT 360 LAEAFKYFVQGMGYMPSASMTRLMRSRTASGSSVTSLDGTRSRSHTSEGTRSRSHTSEGT Sbjct: 301 LAEAFKYFVQGMGYMPSASMTRLMRSRTASGSSVTSLDGTRSRSHTSEGTRSRSHTSEGT 360 Query: 361 RSRSHTSEGAHLDITPNSGAAGNSAGPKSMEVSC 394 RSRSHTSEGAHLDITPNSGAAGNSAGPKSMEVSC Sbjct: 361 RSRSHTSEGAHLDITPNSGAAGNSAGPKSMEVSC 394 >gi|37655183 N-myc downstream regulated 1 [Homo sapiens] Length = 394 Score = 802 bits (2072), Expect = 0.0 Identities = 394/394 (100%), Positives = 394/394 (100%) Query: 1 MSREMQDVDLAEVKPLVEKGETITGLLQEFDVQEQDIETLHGSVHVTLCGTPKGNRPVIL 60 MSREMQDVDLAEVKPLVEKGETITGLLQEFDVQEQDIETLHGSVHVTLCGTPKGNRPVIL Sbjct: 1 MSREMQDVDLAEVKPLVEKGETITGLLQEFDVQEQDIETLHGSVHVTLCGTPKGNRPVIL 60 Query: 61 TYHDIGMNHKTCYNPLFNYEDMQEITQHFAVCHVDAPGQQDGAASFPAGYMYPSMDQLAE 120 TYHDIGMNHKTCYNPLFNYEDMQEITQHFAVCHVDAPGQQDGAASFPAGYMYPSMDQLAE Sbjct: 61 TYHDIGMNHKTCYNPLFNYEDMQEITQHFAVCHVDAPGQQDGAASFPAGYMYPSMDQLAE 120 Query: 121 MLPGVLQQFGLKSIIGMGTGAGAYILTRFALNNPEMVEGLVLINVNPCAEGWMDWAASKI 180 MLPGVLQQFGLKSIIGMGTGAGAYILTRFALNNPEMVEGLVLINVNPCAEGWMDWAASKI Sbjct: 121 MLPGVLQQFGLKSIIGMGTGAGAYILTRFALNNPEMVEGLVLINVNPCAEGWMDWAASKI 180 Query: 181 SGWTQALPDMVVSHLFGKEEMQSNVEVVHTYRQHIVNDMNPGNLHLFINAYNSRRDLEIE 240 SGWTQALPDMVVSHLFGKEEMQSNVEVVHTYRQHIVNDMNPGNLHLFINAYNSRRDLEIE Sbjct: 181 SGWTQALPDMVVSHLFGKEEMQSNVEVVHTYRQHIVNDMNPGNLHLFINAYNSRRDLEIE 240 Query: 241 RPMPGTHTVTLQCPALLVVGDSSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQISQPAK 300 RPMPGTHTVTLQCPALLVVGDSSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQISQPAK Sbjct: 241 RPMPGTHTVTLQCPALLVVGDSSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQISQPAK 300 Query: 301 LAEAFKYFVQGMGYMPSASMTRLMRSRTASGSSVTSLDGTRSRSHTSEGTRSRSHTSEGT 360 LAEAFKYFVQGMGYMPSASMTRLMRSRTASGSSVTSLDGTRSRSHTSEGTRSRSHTSEGT Sbjct: 301 LAEAFKYFVQGMGYMPSASMTRLMRSRTASGSSVTSLDGTRSRSHTSEGTRSRSHTSEGT 360 Query: 361 RSRSHTSEGAHLDITPNSGAAGNSAGPKSMEVSC 394 RSRSHTSEGAHLDITPNSGAAGNSAGPKSMEVSC Sbjct: 361 RSRSHTSEGAHLDITPNSGAAGNSAGPKSMEVSC 394 >gi|14165266 N-myc downstream-regulated gene 3 isoform a [Homo sapiens] Length = 375 Score = 481 bits (1239), Expect = e-136 Identities = 236/359 (65%), Positives = 289/359 (80%), Gaps = 5/359 (1%) Query: 4 EMQDVDLAEVKPLVEKGETITGLLQEFDVQEQDIETLHGSVHVTLCGTPKGNRPVILTYH 63 E+QDV L E+KPL+ + T Q+FD QE DIET HG VHVT+ G PKGNRPVILTYH Sbjct: 3 ELQDVQLTEIKPLLND-KNGTRNFQDFDCQEHDIETTHGVVHVTIRGLPKGNRPVILTYH 61 Query: 64 DIGMNHKTCYNPLFNYEDMQEITQHFAVCHVDAPGQQDGAASFPAGYMYPSMDQLAEMLP 123 DIG+NHK+C+N FN+EDMQEITQHFAVCHVDAPGQQ+GA SFP GY YP+MD+LAEMLP Sbjct: 62 DIGLNHKSCFNAFFNFEDMQEITQHFAVCHVDAPGQQEGAPSFPTGYQYPTMDELAEMLP 121 Query: 124 GVLQQFGLKSIIGMGTGAGAYILTRFALNNPEMVEGLVLINVNPCAEGWMDWAASKISGW 183 VL LKSIIG+G GAGAYIL+RFALN+PE+VEGLVLINV+PCA+GW+DWAASK+SG Sbjct: 122 PVLTHLSLKSIIGIGVGAGAYILSRFALNHPELVEGLVLINVDPCAKGWIDWAASKLSGL 181 Query: 184 TQALPDMVVSHLFGKEEMQSNVEVVHTYRQHIVNDMNPGNLHLFINAYNSRRDLEIERPM 243 T + D++++H FG+EE+Q+N++++ TYR HI D+N NL LF+N+YN RRDLEIERP+ Sbjct: 182 TTNVVDIILAHHFGQEELQANLDLIQTYRMHIAQDINQDNLQLFLNSYNGRRDLEIERPI 241 Query: 244 PGTH---TVTLQCPALLVVGDSSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQISQPAK 300 G + + TL+C LLVVGD+SPAV+AVVECNS+L+P TTLLKMADCGGLPQ+ QP K Sbjct: 242 LGQNDNKSKTLKCSTLLVVGDNSPAVEAVVECNSRLNPINTTLLKMADCGGLPQVVQPGK 301 Query: 301 LAEAFKYFVQGMGYMPSASMTRLMRSRT-ASGSSVTSLDGTRSRSHTSEGTRSRSHTSE 358 L EAFKYF+QGMGY+PSASMTRL RSRT ++ SS+ S + SRS TS + + E Sbjct: 302 LTEAFKYFLQGMGYIPSASMTRLARSRTHSTSSSLGSGESPFSRSVTSNQSDGTQESCE 360 >gi|32130514 N-myc downstream-regulated gene 3 isoform b [Homo sapiens] Length = 363 Score = 469 bits (1208), Expect = e-132 Identities = 231/359 (64%), Positives = 283/359 (78%), Gaps = 17/359 (4%) Query: 4 EMQDVDLAEVKPLVEKGETITGLLQEFDVQEQDIETLHGSVHVTLCGTPKGNRPVILTYH 63 E+QDV L E+KPL+ +E DIET HG VHVT+ G PKGNRPVILTYH Sbjct: 3 ELQDVQLTEIKPLLND-------------KEHDIETTHGVVHVTIRGLPKGNRPVILTYH 49 Query: 64 DIGMNHKTCYNPLFNYEDMQEITQHFAVCHVDAPGQQDGAASFPAGYMYPSMDQLAEMLP 123 DIG+NHK+C+N FN+EDMQEITQHFAVCHVDAPGQQ+GA SFP GY YP+MD+LAEMLP Sbjct: 50 DIGLNHKSCFNAFFNFEDMQEITQHFAVCHVDAPGQQEGAPSFPTGYQYPTMDELAEMLP 109 Query: 124 GVLQQFGLKSIIGMGTGAGAYILTRFALNNPEMVEGLVLINVNPCAEGWMDWAASKISGW 183 VL LKSIIG+G GAGAYIL+RFALN+PE+VEGLVLINV+PCA+GW+DWAASK+SG Sbjct: 110 PVLTHLSLKSIIGIGVGAGAYILSRFALNHPELVEGLVLINVDPCAKGWIDWAASKLSGL 169 Query: 184 TQALPDMVVSHLFGKEEMQSNVEVVHTYRQHIVNDMNPGNLHLFINAYNSRRDLEIERPM 243 T + D++++H FG+EE+Q+N++++ TYR HI D+N NL LF+N+YN RRDLEIERP+ Sbjct: 170 TTNVVDIILAHHFGQEELQANLDLIQTYRMHIAQDINQDNLQLFLNSYNGRRDLEIERPI 229 Query: 244 PGTH---TVTLQCPALLVVGDSSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQISQPAK 300 G + + TL+C LLVVGD+SPAV+AVVECNS+L+P TTLLKMADCGGLPQ+ QP K Sbjct: 230 LGQNDNKSKTLKCSTLLVVGDNSPAVEAVVECNSRLNPINTTLLKMADCGGLPQVVQPGK 289 Query: 301 LAEAFKYFVQGMGYMPSASMTRLMRSRT-ASGSSVTSLDGTRSRSHTSEGTRSRSHTSE 358 L EAFKYF+QGMGY+PSASMTRL RSRT ++ SS+ S + SRS TS + + E Sbjct: 290 LTEAFKYFLQGMGYIPSASMTRLARSRTHSTSSSLGSGESPFSRSVTSNQSDGTQESCE 348 >gi|194440722 NDRG family member 4 isoform 2 [Homo sapiens] Length = 391 Score = 445 bits (1145), Expect = e-125 Identities = 219/366 (59%), Positives = 276/366 (75%), Gaps = 13/366 (3%) Query: 5 MQDVDLAEVKPLVEKGETITGL--------LQEFDVQEQDIETLHGSVHVTLCGTPKGNR 56 +Q++ E KPL+ +G+ T L + D +E DIET +G +HV + G+PKGNR Sbjct: 24 LQELRFPEEKPLL-RGQDATELESSDAFLLAADTDWKEHDIETPYGLLHVVIRGSPKGNR 82 Query: 57 PVILTYHDIGMNHKTCYNPLFNYEDMQEITQHFAVCHVDAPGQQDGAASFPAGYMYPSMD 116 P ILTYHD+G+NHK C+N FN+EDMQEIT+HF VCHVDAPGQQ GA+ FP GY +PSM+ Sbjct: 83 PAILTYHDVGLNHKLCFNTFFNFEDMQEITKHFVVCHVDAPGQQVGASQFPQGYQFPSME 142 Query: 117 QLAEMLPGVLQQFGLKSIIGMGTGAGAYILTRFALNNPEMVEGLVLINVNPCAEGWMDWA 176 QLA MLP V+Q FG K +IG+G GAGAY+L +FAL P++VEGLVL+N++P +GW+DWA Sbjct: 143 QLAAMLPSVVQHFGFKYVIGIGVGAGAYVLAKFALIFPDLVEGLVLVNIDPNGKGWIDWA 202 Query: 177 ASKISGWTQALPDMVVSHLFGKEEMQSNVEVVHTYRQHIVNDMNPGNLHLFINAYNSRRD 236 A+K+SG T LPD V+SHLF +EE+ +N E+V +YRQ I N +N NL LF N YNSRRD Sbjct: 203 ATKLSGLTSTLPDTVLSHLFSQEELVNNTELVQSYRQQIGNVVNQANLQLFWNMYNSRRD 262 Query: 237 LEIERPMPGTHTVTLQCPALLVVGDSSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQIS 296 L+I RP + TL+CP +LVVGD++PA D VVECNSKLDPT TT LKMAD GGLPQ++ Sbjct: 263 LDINRPGTVPNAKTLRCPVMLVVGDNAPAEDGVVECNSKLDPTTTTFLKMADSGGLPQVT 322 Query: 297 QPAKLAEAFKYFVQGMGYMPSASMTRLMRSRTASGSSVTSLDGTR----SRSHTSEGTRS 352 QP KL EAFKYF+QGMGYMPSASMTRL RSRTAS +S +S+DG+R + S +SEG Sbjct: 323 QPGKLTEAFKYFLQGMGYMPSASMTRLARSRTASLTSASSVDGSRPQACTHSESSEGLGQ 382 Query: 353 RSHTSE 358 +HT E Sbjct: 383 VNHTME 388 >gi|13430864 NDRG family member 4 isoform 1 [Homo sapiens] Length = 371 Score = 445 bits (1145), Expect = e-125 Identities = 219/366 (59%), Positives = 276/366 (75%), Gaps = 13/366 (3%) Query: 5 MQDVDLAEVKPLVEKGETITGL--------LQEFDVQEQDIETLHGSVHVTLCGTPKGNR 56 +Q++ E KPL+ +G+ T L + D +E DIET +G +HV + G+PKGNR Sbjct: 4 LQELRFPEEKPLL-RGQDATELESSDAFLLAADTDWKEHDIETPYGLLHVVIRGSPKGNR 62 Query: 57 PVILTYHDIGMNHKTCYNPLFNYEDMQEITQHFAVCHVDAPGQQDGAASFPAGYMYPSMD 116 P ILTYHD+G+NHK C+N FN+EDMQEIT+HF VCHVDAPGQQ GA+ FP GY +PSM+ Sbjct: 63 PAILTYHDVGLNHKLCFNTFFNFEDMQEITKHFVVCHVDAPGQQVGASQFPQGYQFPSME 122 Query: 117 QLAEMLPGVLQQFGLKSIIGMGTGAGAYILTRFALNNPEMVEGLVLINVNPCAEGWMDWA 176 QLA MLP V+Q FG K +IG+G GAGAY+L +FAL P++VEGLVL+N++P +GW+DWA Sbjct: 123 QLAAMLPSVVQHFGFKYVIGIGVGAGAYVLAKFALIFPDLVEGLVLVNIDPNGKGWIDWA 182 Query: 177 ASKISGWTQALPDMVVSHLFGKEEMQSNVEVVHTYRQHIVNDMNPGNLHLFINAYNSRRD 236 A+K+SG T LPD V+SHLF +EE+ +N E+V +YRQ I N +N NL LF N YNSRRD Sbjct: 183 ATKLSGLTSTLPDTVLSHLFSQEELVNNTELVQSYRQQIGNVVNQANLQLFWNMYNSRRD 242 Query: 237 LEIERPMPGTHTVTLQCPALLVVGDSSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQIS 296 L+I RP + TL+CP +LVVGD++PA D VVECNSKLDPT TT LKMAD GGLPQ++ Sbjct: 243 LDINRPGTVPNAKTLRCPVMLVVGDNAPAEDGVVECNSKLDPTTTTFLKMADSGGLPQVT 302 Query: 297 QPAKLAEAFKYFVQGMGYMPSASMTRLMRSRTASGSSVTSLDGTR----SRSHTSEGTRS 352 QP KL EAFKYF+QGMGYMPSASMTRL RSRTAS +S +S+DG+R + S +SEG Sbjct: 303 QPGKLTEAFKYFLQGMGYMPSASMTRLARSRTASLTSASSVDGSRPQACTHSESSEGLGQ 362 Query: 353 RSHTSE 358 +HT E Sbjct: 363 VNHTME 368 >gi|14165264 NDRG family member 4 isoform 1 [Homo sapiens] Length = 371 Score = 445 bits (1145), Expect = e-125 Identities = 219/366 (59%), Positives = 276/366 (75%), Gaps = 13/366 (3%) Query: 5 MQDVDLAEVKPLVEKGETITGL--------LQEFDVQEQDIETLHGSVHVTLCGTPKGNR 56 +Q++ E KPL+ +G+ T L + D +E DIET +G +HV + G+PKGNR Sbjct: 4 LQELRFPEEKPLL-RGQDATELESSDAFLLAADTDWKEHDIETPYGLLHVVIRGSPKGNR 62 Query: 57 PVILTYHDIGMNHKTCYNPLFNYEDMQEITQHFAVCHVDAPGQQDGAASFPAGYMYPSMD 116 P ILTYHD+G+NHK C+N FN+EDMQEIT+HF VCHVDAPGQQ GA+ FP GY +PSM+ Sbjct: 63 PAILTYHDVGLNHKLCFNTFFNFEDMQEITKHFVVCHVDAPGQQVGASQFPQGYQFPSME 122 Query: 117 QLAEMLPGVLQQFGLKSIIGMGTGAGAYILTRFALNNPEMVEGLVLINVNPCAEGWMDWA 176 QLA MLP V+Q FG K +IG+G GAGAY+L +FAL P++VEGLVL+N++P +GW+DWA Sbjct: 123 QLAAMLPSVVQHFGFKYVIGIGVGAGAYVLAKFALIFPDLVEGLVLVNIDPNGKGWIDWA 182 Query: 177 ASKISGWTQALPDMVVSHLFGKEEMQSNVEVVHTYRQHIVNDMNPGNLHLFINAYNSRRD 236 A+K+SG T LPD V+SHLF +EE+ +N E+V +YRQ I N +N NL LF N YNSRRD Sbjct: 183 ATKLSGLTSTLPDTVLSHLFSQEELVNNTELVQSYRQQIGNVVNQANLQLFWNMYNSRRD 242 Query: 237 LEIERPMPGTHTVTLQCPALLVVGDSSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQIS 296 L+I RP + TL+CP +LVVGD++PA D VVECNSKLDPT TT LKMAD GGLPQ++ Sbjct: 243 LDINRPGTVPNAKTLRCPVMLVVGDNAPAEDGVVECNSKLDPTTTTFLKMADSGGLPQVT 302 Query: 297 QPAKLAEAFKYFVQGMGYMPSASMTRLMRSRTASGSSVTSLDGTR----SRSHTSEGTRS 352 QP KL EAFKYF+QGMGYMPSASMTRL RSRTAS +S +S+DG+R + S +SEG Sbjct: 303 QPGKLTEAFKYFLQGMGYMPSASMTRLARSRTASLTSASSVDGSRPQACTHSESSEGLGQ 362 Query: 353 RSHTSE 358 +HT E Sbjct: 363 VNHTME 368 >gi|42544224 N-myc downstream-regulated gene 2 isoform b [Homo sapiens] Length = 357 Score = 399 bits (1026), Expect = e-111 Identities = 200/365 (54%), Positives = 258/365 (70%), Gaps = 13/365 (3%) Query: 4 EMQDVDLAEVKPLVEKGETITGLLQEFDVQEQDIETLHGSVHVTLCGTPKGNRPVILTYH 63 E+Q+V + E KPL+ G+T + +ET +GSV T+ GTPK RP ILTYH Sbjct: 3 ELQEVQITEEKPLLP-GQTPEA------AKTHSVETPYGSVTFTVYGTPKPKRPAILTYH 55 Query: 64 DIGMNHKTCYNPLFNYEDMQEITQHFAVCHVDAPGQQDGAASFPAGYMYPSMDQLAEMLP 123 D+G+N+K+C+ PLF +EDMQEI Q+F HVDAPG ++GA FP GY YPS+DQLA+M+P Sbjct: 56 DVGLNYKSCFQPLFQFEDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIP 115 Query: 124 GVLQQFGLKSIIGMGTGAGAYILTRFALNNPEMVEGLVLINVNPCAEGWMDWAASKISGW 183 VLQ +IIG+G GAGAYIL R+ALN+P+ VEGLVLIN++P A+GWMDWAA K++G Sbjct: 116 CVLQYLNFSTIIGVGVGAGAYILARYALNHPDTVEGLVLINIDPNAKGWMDWAAHKLTGL 175 Query: 184 TQALPDMVVSHLFGKEEMQSNVEVVHTYRQHIVNDMNPGNLHLFINAYNSRRDLEIERPM 243 T ++P+M++ HLF +EE+ N E++ YR I + N N+ L+ N+YN+RRDL ER Sbjct: 176 TSSIPEMILGHLFSQEELSGNSELIQKYRNIITHAPNLDNIELYWNSYNNRRDLNFER-- 233 Query: 244 PGTHTVTLQCPALLVVGDSSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQISQPAKLAE 303 +TL+CP +LVVGD +P DAVVECNSKLDPT+T+ LKMAD GG PQ++QP KL E Sbjct: 234 --GGDITLRCPVMLVVGDQAPHEDAVVECNSKLDPTQTSFLKMADSGGQPQLTQPGKLTE 291 Query: 304 AFKYFVQGMGYMPSASMTRLMRSRTASGSSVTSLDGTRSRSHTSEGTRSRSHTSEGTRSR 363 AFKYF+QGMGYM S+ MTRL RSRTAS +S S+DG RSRS T + S G Sbjct: 292 AFKYFLQGMGYMASSCMTRLSRSRTASLTSAASVDGNRSRSRTLSQSSESGTLSSG--PP 349 Query: 364 SHTSE 368 HT E Sbjct: 350 GHTME 354 >gi|42544222 N-myc downstream-regulated gene 2 isoform a [Homo sapiens] Length = 371 Score = 399 bits (1026), Expect = e-111 Identities = 201/373 (53%), Positives = 261/373 (69%), Gaps = 15/373 (4%) Query: 4 EMQDVDLAEVKPLV--------EKGETITGLLQEFDVQEQDIETLHGSVHVTLCGTPKGN 55 E+Q+V + E KPL+ ++ E +L + Q +ET +GSV T+ GTPK Sbjct: 3 ELQEVQITEEKPLLPGQTPEAAKEAELAARILLD-QGQTHSVETPYGSVTFTVYGTPKPK 61 Query: 56 RPVILTYHDIGMNHKTCYNPLFNYEDMQEITQHFAVCHVDAPGQQDGAASFPAGYMYPSM 115 RP ILTYHD+G+N+K+C+ PLF +EDMQEI Q+F HVDAPG ++GA FP GY YPS+ Sbjct: 62 RPAILTYHDVGLNYKSCFQPLFQFEDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYPSL 121 Query: 116 DQLAEMLPGVLQQFGLKSIIGMGTGAGAYILTRFALNNPEMVEGLVLINVNPCAEGWMDW 175 DQLA+M+P VLQ +IIG+G GAGAYIL R+ALN+P+ VEGLVLIN++P A+GWMDW Sbjct: 122 DQLADMIPCVLQYLNFSTIIGVGVGAGAYILARYALNHPDTVEGLVLINIDPNAKGWMDW 181 Query: 176 AASKISGWTQALPDMVVSHLFGKEEMQSNVEVVHTYRQHIVNDMNPGNLHLFINAYNSRR 235 AA K++G T ++P+M++ HLF +EE+ N E++ YR I + N N+ L+ N+YN+RR Sbjct: 182 AAHKLTGLTSSIPEMILGHLFSQEELSGNSELIQKYRNIITHAPNLDNIELYWNSYNNRR 241 Query: 236 DLEIERPMPGTHTVTLQCPALLVVGDSSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQI 295 DL ER +TL+CP +LVVGD +P DAVVECNSKLDPT+T+ LKMAD GG PQ+ Sbjct: 242 DLNFER----GGDITLRCPVMLVVGDQAPHEDAVVECNSKLDPTQTSFLKMADSGGQPQL 297 Query: 296 SQPAKLAEAFKYFVQGMGYMPSASMTRLMRSRTASGSSVTSLDGTRSRSHTSEGTRSRSH 355 +QP KL EAFKYF+QGMGYM S+ MTRL RSRTAS +S S+DG RSRS T + Sbjct: 298 TQPGKLTEAFKYFLQGMGYMASSCMTRLSRSRTASLTSAASVDGNRSRSRTLSQSSESGT 357 Query: 356 TSEGTRSRSHTSE 368 S G HT E Sbjct: 358 LSSG--PPGHTME 368 >gi|42544220 N-myc downstream-regulated gene 2 isoform a [Homo sapiens] Length = 371 Score = 399 bits (1026), Expect = e-111 Identities = 201/373 (53%), Positives = 261/373 (69%), Gaps = 15/373 (4%) Query: 4 EMQDVDLAEVKPLV--------EKGETITGLLQEFDVQEQDIETLHGSVHVTLCGTPKGN 55 E+Q+V + E KPL+ ++ E +L + Q +ET +GSV T+ GTPK Sbjct: 3 ELQEVQITEEKPLLPGQTPEAAKEAELAARILLD-QGQTHSVETPYGSVTFTVYGTPKPK 61 Query: 56 RPVILTYHDIGMNHKTCYNPLFNYEDMQEITQHFAVCHVDAPGQQDGAASFPAGYMYPSM 115 RP ILTYHD+G+N+K+C+ PLF +EDMQEI Q+F HVDAPG ++GA FP GY YPS+ Sbjct: 62 RPAILTYHDVGLNYKSCFQPLFQFEDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYPSL 121 Query: 116 DQLAEMLPGVLQQFGLKSIIGMGTGAGAYILTRFALNNPEMVEGLVLINVNPCAEGWMDW 175 DQLA+M+P VLQ +IIG+G GAGAYIL R+ALN+P+ VEGLVLIN++P A+GWMDW Sbjct: 122 DQLADMIPCVLQYLNFSTIIGVGVGAGAYILARYALNHPDTVEGLVLINIDPNAKGWMDW 181 Query: 176 AASKISGWTQALPDMVVSHLFGKEEMQSNVEVVHTYRQHIVNDMNPGNLHLFINAYNSRR 235 AA K++G T ++P+M++ HLF +EE+ N E++ YR I + N N+ L+ N+YN+RR Sbjct: 182 AAHKLTGLTSSIPEMILGHLFSQEELSGNSELIQKYRNIITHAPNLDNIELYWNSYNNRR 241 Query: 236 DLEIERPMPGTHTVTLQCPALLVVGDSSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQI 295 DL ER +TL+CP +LVVGD +P DAVVECNSKLDPT+T+ LKMAD GG PQ+ Sbjct: 242 DLNFER----GGDITLRCPVMLVVGDQAPHEDAVVECNSKLDPTQTSFLKMADSGGQPQL 297 Query: 296 SQPAKLAEAFKYFVQGMGYMPSASMTRLMRSRTASGSSVTSLDGTRSRSHTSEGTRSRSH 355 +QP KL EAFKYF+QGMGYM S+ MTRL RSRTAS +S S+DG RSRS T + Sbjct: 298 TQPGKLTEAFKYFLQGMGYMASSCMTRLSRSRTASLTSAASVDGNRSRSRTLSQSSESGT 357 Query: 356 TSEGTRSRSHTSE 368 S G HT E Sbjct: 358 LSSG--PPGHTME 368 >gi|42544218 N-myc downstream-regulated gene 2 isoform b [Homo sapiens] Length = 357 Score = 399 bits (1026), Expect = e-111 Identities = 200/365 (54%), Positives = 258/365 (70%), Gaps = 13/365 (3%) Query: 4 EMQDVDLAEVKPLVEKGETITGLLQEFDVQEQDIETLHGSVHVTLCGTPKGNRPVILTYH 63 E+Q+V + E KPL+ G+T + +ET +GSV T+ GTPK RP ILTYH Sbjct: 3 ELQEVQITEEKPLLP-GQTPEA------AKTHSVETPYGSVTFTVYGTPKPKRPAILTYH 55 Query: 64 DIGMNHKTCYNPLFNYEDMQEITQHFAVCHVDAPGQQDGAASFPAGYMYPSMDQLAEMLP 123 D+G+N+K+C+ PLF +EDMQEI Q+F HVDAPG ++GA FP GY YPS+DQLA+M+P Sbjct: 56 DVGLNYKSCFQPLFQFEDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIP 115 Query: 124 GVLQQFGLKSIIGMGTGAGAYILTRFALNNPEMVEGLVLINVNPCAEGWMDWAASKISGW 183 VLQ +IIG+G GAGAYIL R+ALN+P+ VEGLVLIN++P A+GWMDWAA K++G Sbjct: 116 CVLQYLNFSTIIGVGVGAGAYILARYALNHPDTVEGLVLINIDPNAKGWMDWAAHKLTGL 175 Query: 184 TQALPDMVVSHLFGKEEMQSNVEVVHTYRQHIVNDMNPGNLHLFINAYNSRRDLEIERPM 243 T ++P+M++ HLF +EE+ N E++ YR I + N N+ L+ N+YN+RRDL ER Sbjct: 176 TSSIPEMILGHLFSQEELSGNSELIQKYRNIITHAPNLDNIELYWNSYNNRRDLNFER-- 233 Query: 244 PGTHTVTLQCPALLVVGDSSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQISQPAKLAE 303 +TL+CP +LVVGD +P DAVVECNSKLDPT+T+ LKMAD GG PQ++QP KL E Sbjct: 234 --GGDITLRCPVMLVVGDQAPHEDAVVECNSKLDPTQTSFLKMADSGGQPQLTQPGKLTE 291 Query: 304 AFKYFVQGMGYMPSASMTRLMRSRTASGSSVTSLDGTRSRSHTSEGTRSRSHTSEGTRSR 363 AFKYF+QGMGYM S+ MTRL RSRTAS +S S+DG RSRS T + S G Sbjct: 292 AFKYFLQGMGYMASSCMTRLSRSRTASLTSAASVDGNRSRSRTLSQSSESGTLSSG--PP 349 Query: 364 SHTSE 368 HT E Sbjct: 350 GHTME 354 >gi|42544216 N-myc downstream-regulated gene 2 isoform a [Homo sapiens] Length = 371 Score = 399 bits (1026), Expect = e-111 Identities = 201/373 (53%), Positives = 261/373 (69%), Gaps = 15/373 (4%) Query: 4 EMQDVDLAEVKPLV--------EKGETITGLLQEFDVQEQDIETLHGSVHVTLCGTPKGN 55 E+Q+V + E KPL+ ++ E +L + Q +ET +GSV T+ GTPK Sbjct: 3 ELQEVQITEEKPLLPGQTPEAAKEAELAARILLD-QGQTHSVETPYGSVTFTVYGTPKPK 61 Query: 56 RPVILTYHDIGMNHKTCYNPLFNYEDMQEITQHFAVCHVDAPGQQDGAASFPAGYMYPSM 115 RP ILTYHD+G+N+K+C+ PLF +EDMQEI Q+F HVDAPG ++GA FP GY YPS+ Sbjct: 62 RPAILTYHDVGLNYKSCFQPLFQFEDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYPSL 121 Query: 116 DQLAEMLPGVLQQFGLKSIIGMGTGAGAYILTRFALNNPEMVEGLVLINVNPCAEGWMDW 175 DQLA+M+P VLQ +IIG+G GAGAYIL R+ALN+P+ VEGLVLIN++P A+GWMDW Sbjct: 122 DQLADMIPCVLQYLNFSTIIGVGVGAGAYILARYALNHPDTVEGLVLINIDPNAKGWMDW 181 Query: 176 AASKISGWTQALPDMVVSHLFGKEEMQSNVEVVHTYRQHIVNDMNPGNLHLFINAYNSRR 235 AA K++G T ++P+M++ HLF +EE+ N E++ YR I + N N+ L+ N+YN+RR Sbjct: 182 AAHKLTGLTSSIPEMILGHLFSQEELSGNSELIQKYRNIITHAPNLDNIELYWNSYNNRR 241 Query: 236 DLEIERPMPGTHTVTLQCPALLVVGDSSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQI 295 DL ER +TL+CP +LVVGD +P DAVVECNSKLDPT+T+ LKMAD GG PQ+ Sbjct: 242 DLNFER----GGDITLRCPVMLVVGDQAPHEDAVVECNSKLDPTQTSFLKMADSGGQPQL 297 Query: 296 SQPAKLAEAFKYFVQGMGYMPSASMTRLMRSRTASGSSVTSLDGTRSRSHTSEGTRSRSH 355 +QP KL EAFKYF+QGMGYM S+ MTRL RSRTAS +S S+DG RSRS T + Sbjct: 298 TQPGKLTEAFKYFLQGMGYMASSCMTRLSRSRTASLTSAASVDGNRSRSRTLSQSSESGT 357 Query: 356 TSEGTRSRSHTSE 368 S G HT E Sbjct: 358 LSSG--PPGHTME 368 >gi|10280620 N-myc downstream-regulated gene 2 isoform b [Homo sapiens] Length = 357 Score = 399 bits (1026), Expect = e-111 Identities = 200/365 (54%), Positives = 258/365 (70%), Gaps = 13/365 (3%) Query: 4 EMQDVDLAEVKPLVEKGETITGLLQEFDVQEQDIETLHGSVHVTLCGTPKGNRPVILTYH 63 E+Q+V + E KPL+ G+T + +ET +GSV T+ GTPK RP ILTYH Sbjct: 3 ELQEVQITEEKPLLP-GQTPEA------AKTHSVETPYGSVTFTVYGTPKPKRPAILTYH 55 Query: 64 DIGMNHKTCYNPLFNYEDMQEITQHFAVCHVDAPGQQDGAASFPAGYMYPSMDQLAEMLP 123 D+G+N+K+C+ PLF +EDMQEI Q+F HVDAPG ++GA FP GY YPS+DQLA+M+P Sbjct: 56 DVGLNYKSCFQPLFQFEDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIP 115 Query: 124 GVLQQFGLKSIIGMGTGAGAYILTRFALNNPEMVEGLVLINVNPCAEGWMDWAASKISGW 183 VLQ +IIG+G GAGAYIL R+ALN+P+ VEGLVLIN++P A+GWMDWAA K++G Sbjct: 116 CVLQYLNFSTIIGVGVGAGAYILARYALNHPDTVEGLVLINIDPNAKGWMDWAAHKLTGL 175 Query: 184 TQALPDMVVSHLFGKEEMQSNVEVVHTYRQHIVNDMNPGNLHLFINAYNSRRDLEIERPM 243 T ++P+M++ HLF +EE+ N E++ YR I + N N+ L+ N+YN+RRDL ER Sbjct: 176 TSSIPEMILGHLFSQEELSGNSELIQKYRNIITHAPNLDNIELYWNSYNNRRDLNFER-- 233 Query: 244 PGTHTVTLQCPALLVVGDSSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQISQPAKLAE 303 +TL+CP +LVVGD +P DAVVECNSKLDPT+T+ LKMAD GG PQ++QP KL E Sbjct: 234 --GGDITLRCPVMLVVGDQAPHEDAVVECNSKLDPTQTSFLKMADSGGQPQLTQPGKLTE 291 Query: 304 AFKYFVQGMGYMPSASMTRLMRSRTASGSSVTSLDGTRSRSHTSEGTRSRSHTSEGTRSR 363 AFKYF+QGMGYM S+ MTRL RSRTAS +S S+DG RSRS T + S G Sbjct: 292 AFKYFLQGMGYMASSCMTRLSRSRTASLTSAASVDGNRSRSRTLSQSSESGTLSSG--PP 349 Query: 364 SHTSE 368 HT E Sbjct: 350 GHTME 354 >gi|42544213 N-myc downstream-regulated gene 2 isoform b [Homo sapiens] Length = 357 Score = 399 bits (1026), Expect = e-111 Identities = 200/365 (54%), Positives = 258/365 (70%), Gaps = 13/365 (3%) Query: 4 EMQDVDLAEVKPLVEKGETITGLLQEFDVQEQDIETLHGSVHVTLCGTPKGNRPVILTYH 63 E+Q+V + E KPL+ G+T + +ET +GSV T+ GTPK RP ILTYH Sbjct: 3 ELQEVQITEEKPLLP-GQTPEA------AKTHSVETPYGSVTFTVYGTPKPKRPAILTYH 55 Query: 64 DIGMNHKTCYNPLFNYEDMQEITQHFAVCHVDAPGQQDGAASFPAGYMYPSMDQLAEMLP 123 D+G+N+K+C+ PLF +EDMQEI Q+F HVDAPG ++GA FP GY YPS+DQLA+M+P Sbjct: 56 DVGLNYKSCFQPLFQFEDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIP 115 Query: 124 GVLQQFGLKSIIGMGTGAGAYILTRFALNNPEMVEGLVLINVNPCAEGWMDWAASKISGW 183 VLQ +IIG+G GAGAYIL R+ALN+P+ VEGLVLIN++P A+GWMDWAA K++G Sbjct: 116 CVLQYLNFSTIIGVGVGAGAYILARYALNHPDTVEGLVLINIDPNAKGWMDWAAHKLTGL 175 Query: 184 TQALPDMVVSHLFGKEEMQSNVEVVHTYRQHIVNDMNPGNLHLFINAYNSRRDLEIERPM 243 T ++P+M++ HLF +EE+ N E++ YR I + N N+ L+ N+YN+RRDL ER Sbjct: 176 TSSIPEMILGHLFSQEELSGNSELIQKYRNIITHAPNLDNIELYWNSYNNRRDLNFER-- 233 Query: 244 PGTHTVTLQCPALLVVGDSSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQISQPAKLAE 303 +TL+CP +LVVGD +P DAVVECNSKLDPT+T+ LKMAD GG PQ++QP KL E Sbjct: 234 --GGDITLRCPVMLVVGDQAPHEDAVVECNSKLDPTQTSFLKMADSGGQPQLTQPGKLTE 291 Query: 304 AFKYFVQGMGYMPSASMTRLMRSRTASGSSVTSLDGTRSRSHTSEGTRSRSHTSEGTRSR 363 AFKYF+QGMGYM S+ MTRL RSRTAS +S S+DG RSRS T + S G Sbjct: 292 AFKYFLQGMGYMASSCMTRLSRSRTASLTSAASVDGNRSRSRTLSQSSESGTLSSG--PP 349 Query: 364 SHTSE 368 HT E Sbjct: 350 GHTME 354 >gi|42544211 N-myc downstream-regulated gene 2 isoform a [Homo sapiens] Length = 371 Score = 399 bits (1026), Expect = e-111 Identities = 201/373 (53%), Positives = 261/373 (69%), Gaps = 15/373 (4%) Query: 4 EMQDVDLAEVKPLV--------EKGETITGLLQEFDVQEQDIETLHGSVHVTLCGTPKGN 55 E+Q+V + E KPL+ ++ E +L + Q +ET +GSV T+ GTPK Sbjct: 3 ELQEVQITEEKPLLPGQTPEAAKEAELAARILLD-QGQTHSVETPYGSVTFTVYGTPKPK 61 Query: 56 RPVILTYHDIGMNHKTCYNPLFNYEDMQEITQHFAVCHVDAPGQQDGAASFPAGYMYPSM 115 RP ILTYHD+G+N+K+C+ PLF +EDMQEI Q+F HVDAPG ++GA FP GY YPS+ Sbjct: 62 RPAILTYHDVGLNYKSCFQPLFQFEDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYPSL 121 Query: 116 DQLAEMLPGVLQQFGLKSIIGMGTGAGAYILTRFALNNPEMVEGLVLINVNPCAEGWMDW 175 DQLA+M+P VLQ +IIG+G GAGAYIL R+ALN+P+ VEGLVLIN++P A+GWMDW Sbjct: 122 DQLADMIPCVLQYLNFSTIIGVGVGAGAYILARYALNHPDTVEGLVLINIDPNAKGWMDW 181 Query: 176 AASKISGWTQALPDMVVSHLFGKEEMQSNVEVVHTYRQHIVNDMNPGNLHLFINAYNSRR 235 AA K++G T ++P+M++ HLF +EE+ N E++ YR I + N N+ L+ N+YN+RR Sbjct: 182 AAHKLTGLTSSIPEMILGHLFSQEELSGNSELIQKYRNIITHAPNLDNIELYWNSYNNRR 241 Query: 236 DLEIERPMPGTHTVTLQCPALLVVGDSSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQI 295 DL ER +TL+CP +LVVGD +P DAVVECNSKLDPT+T+ LKMAD GG PQ+ Sbjct: 242 DLNFER----GGDITLRCPVMLVVGDQAPHEDAVVECNSKLDPTQTSFLKMADSGGQPQL 297 Query: 296 SQPAKLAEAFKYFVQGMGYMPSASMTRLMRSRTASGSSVTSLDGTRSRSHTSEGTRSRSH 355 +QP KL EAFKYF+QGMGYM S+ MTRL RSRTAS +S S+DG RSRS T + Sbjct: 298 TQPGKLTEAFKYFLQGMGYMASSCMTRLSRSRTASLTSAASVDGNRSRSRTLSQSSESGT 357 Query: 356 TSEGTRSRSHTSE 368 S G HT E Sbjct: 358 LSSG--PPGHTME 368 >gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens] Length = 494 Score = 35.0 bits (79), Expect = 0.12 Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 1/62 (1%) Query: 325 RSRTASGSSVTSLDGTRSRSHTSEGTRSRSHTSEGTRSRSHTSEGAHLDITPNSGAAGNS 384 +SR+ SGSS +S +RSRS + +RS+S + +RSRS E + S + +S Sbjct: 203 KSRSRSGSSKSSHSKSRSRSRSGSRSRSKSRSRSQSRSRS-KKEKSRSPSKEKSRSRSHS 261 Query: 385 AG 386 AG Sbjct: 262 AG 263 Score = 29.6 bits (65), Expect = 4.9 Identities = 16/32 (50%), Positives = 23/32 (71%), Gaps = 2/32 (6%) Query: 340 TRSRSHTSEGTRSRSHTSEGTRSRSHTSEGAH 371 +RSRSH+ +RSRS S +RSRS +S+ +H Sbjct: 186 SRSRSHSR--SRSRSRHSRKSRSRSGSSKSSH 215 Score = 29.6 bits (65), Expect = 4.9 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 11/66 (16%) Query: 325 RSRTASGSSVTSLDGTRS-----------RSHTSEGTRSRSHTSEGTRSRSHTSEGAHLD 373 RSR+ SGS S +RS RS + E +RSRSH++ +RS+S + Sbjct: 219 RSRSRSGSRSRSKSRSRSQSRSRSKKEKSRSPSKEKSRSRSHSAGKSRSKSKDQAEEKIQ 278 Query: 374 ITPNSG 379 N G Sbjct: 279 NNDNVG 284 Score = 29.3 bits (64), Expect = 6.5 Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 2/57 (3%) Query: 310 QGMGYMPSASMTRLMRSRTASGS-SVTSLDG-TRSRSHTSEGTRSRSHTSEGTRSRS 364 +G G +A + RSR+ S S S +L +RSRS ++ TRSRS + + SRS Sbjct: 426 EGRGESENAGTNQETRSRSRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRS 482 Score = 28.9 bits (63), Expect = 8.4 Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 3/69 (4%) Query: 323 LMRSRTASGSSVTSLDGTRSRSHTSEGTRSRSHTSEGTRSRSHT---SEGAHLDITPNSG 379 L +SR+ S S S +RSRS + + + R + E +RSRS + SE + + Sbjct: 327 LRQSRSRSRSKGGSRSRSRSRSKSKDKRKGRKRSREESRSRSRSRSKSERSRKRGSKRDS 386 Query: 380 AAGNSAGPK 388 AG+S K Sbjct: 387 KAGSSKKKK 395 >gi|23200008 abhydrolase domain containing 11 isoform 1 [Homo sapiens] Length = 315 Score = 35.0 bits (79), Expect = 0.12 Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 5/77 (6%) Query: 91 VCHVDAPGQQDGAASFPAGYMYPSMDQLAEMLPGVLQQFGLKSIIGMGTGAGAYILTRFA 150 V VDA D S Y S D L ++LP Q GL + +G G A Sbjct: 97 VLTVDARNHGDSPHSPDMSYEIMSQD-LQDLLP----QLGLVPCVVVGHSMGGKTAMLLA 151 Query: 151 LNNPEMVEGLVLINVNP 167 L PE+VE L+ ++++P Sbjct: 152 LQRPELVERLIAVDISP 168 >gi|23200012 abhydrolase domain containing 11 isoform 2 [Homo sapiens] Length = 308 Score = 35.0 bits (79), Expect = 0.12 Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 5/77 (6%) Query: 91 VCHVDAPGQQDGAASFPAGYMYPSMDQLAEMLPGVLQQFGLKSIIGMGTGAGAYILTRFA 150 V VDA D S Y S D L ++LP Q GL + +G G A Sbjct: 90 VLTVDARNHGDSPHSPDMSYEIMSQD-LQDLLP----QLGLVPCVVVGHSMGGKTAMLLA 144 Query: 151 LNNPEMVEGLVLINVNP 167 L PE+VE L+ ++++P Sbjct: 145 LQRPELVERLIAVDISP 161 >gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens] Length = 330 Score = 34.7 bits (78), Expect = 0.15 Identities = 21/52 (40%), Positives = 30/52 (57%) Query: 317 SASMTRLMRSRTASGSSVTSLDGTRSRSHTSEGTRSRSHTSEGTRSRSHTSE 368 S S + RS + S S +S +RSRS +S ++SRS +S RSRS S+ Sbjct: 204 SKSRSSHSRSSSRSSSPSSSRSRSRSRSRSSSSSQSRSRSSSRERSRSRGSK 255 Score = 34.7 bits (78), Expect = 0.15 Identities = 20/45 (44%), Positives = 28/45 (62%) Query: 326 SRTASGSSVTSLDGTRSRSHTSEGTRSRSHTSEGTRSRSHTSEGA 370 SR++S SS S +RSRS +S +RSRS + E +RSR S + Sbjct: 215 SRSSSPSSSRSRSRSRSRSSSSSQSRSRSSSRERSRSRGSKSRSS 259 Score = 30.4 bits (67), Expect = 2.9 Identities = 24/50 (48%), Positives = 30/50 (60%), Gaps = 6/50 (12%) Query: 316 PSASMTRLMRSRTASGSSVTSLDGTRSRSHTSEGTRSRSHTSEGTRSRSH 365 PS+S +R RSR+ S SS S RSRS + E +RSR S + SRSH Sbjct: 220 PSSSRSR-SRSRSRSSSSSQS----RSRSSSRERSRSRGSKSRSS-SRSH 263 >gi|42741682 zinc finger protein 265 isoform 2 [Homo sapiens] Length = 320 Score = 34.7 bits (78), Expect = 0.15 Identities = 21/52 (40%), Positives = 30/52 (57%) Query: 317 SASMTRLMRSRTASGSSVTSLDGTRSRSHTSEGTRSRSHTSEGTRSRSHTSE 368 S S + RS + S S +S +RSRS +S ++SRS +S RSRS S+ Sbjct: 204 SKSRSSHSRSSSRSSSPSSSRSRSRSRSRSSSSSQSRSRSSSRERSRSRGSK 255 Score = 34.7 bits (78), Expect = 0.15 Identities = 20/45 (44%), Positives = 28/45 (62%) Query: 326 SRTASGSSVTSLDGTRSRSHTSEGTRSRSHTSEGTRSRSHTSEGA 370 SR++S SS S +RSRS +S +RSRS + E +RSR S + Sbjct: 215 SRSSSPSSSRSRSRSRSRSSSSSQSRSRSSSRERSRSRGSKSRSS 259 Score = 30.4 bits (67), Expect = 2.9 Identities = 24/50 (48%), Positives = 30/50 (60%), Gaps = 6/50 (12%) Query: 316 PSASMTRLMRSRTASGSSVTSLDGTRSRSHTSEGTRSRSHTSEGTRSRSH 365 PS+S +R RSR+ S SS S RSRS + E +RSR S + SRSH Sbjct: 220 PSSSRSR-SRSRSRSSSSSQS----RSRSSSRERSRSRGSKSRSS-SRSH 263 >gi|148233596 LPS-responsive vesicle trafficking, beach and anchor containing [Homo sapiens] Length = 2863 Score = 34.3 bits (77), Expect = 0.20 Identities = 16/51 (31%), Positives = 26/51 (50%) Query: 340 TRSRSHTSEGTRSRSHTSEGTRSRSHTSEGAHLDITPNSGAAGNSAGPKSM 390 T + SE T S G + T G+H+++TP++ G SAGP ++ Sbjct: 1587 TTASVEESESTSSARRRDSGIGEETATGLGSHVEVTPHTAPPGVSAGPDAI 1637 >gi|239742514 PREDICTED: similar to Putative POM121-like protein 1-like [Homo sapiens] Length = 896 Score = 33.9 bits (76), Expect = 0.26 Identities = 40/142 (28%), Positives = 53/142 (37%), Gaps = 15/142 (10%) Query: 260 GDSSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQISQPAKLAEAFKYFVQGMGYMPSAS 319 G S+PA A S L+PT +LL D G ++ A A + V+ S Sbjct: 597 GTSAPAAAAAAPPPSTLNPTSGSLLNAVDEGPSHFLASATAAARARRSQVR-YNQRSQTS 655 Query: 320 MTRLMRSRTASGSSVTSLDGTR--------SRSHTSEGTRSRSHTSE----GTRSRSHTS 367 TR R AS SS +S +G + + SH S + SE SR Sbjct: 656 RTRSCLKRNASSSSHSSTEGLQELKRRRGPASSHCQLALSSSNTVSEDGPQAVSSRDTRC 715 Query: 368 EGAHLDITPNSGAAGNSAGPKS 389 E A D P A P+S Sbjct: 716 EKA--DTAPGQTLAPRGGSPRS 735 Score = 33.1 bits (74), Expect = 0.45 Identities = 38/139 (27%), Positives = 54/139 (38%), Gaps = 12/139 (8%) Query: 262 SSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQISQPAKLAEAFKYFVQGMGYMPSASMT 321 S+PA A S L+PT +LL D G ++ A A + V+ S T Sbjct: 326 SAPAAAAAAPPPSTLNPTSGSLLNAVDGGPSHFLASATAAARAQRSEVR-YNQRSQISRT 384 Query: 322 RLMRSRTASGSSVTSLDG----TRSRSHTSE-----GTRSRSHTSEGTR--SRSHTSEGA 370 R R AS SS +S +G R R S + S++ + +G + S HT Sbjct: 385 RSCLKRNASSSSHSSTEGLPELKRRRGPASSHCQLAHSSSKTVSEDGPQAVSSGHTRCEK 444 Query: 371 HLDITPNSGAAGNSAGPKS 389 D P A P+S Sbjct: 445 RADTAPGQTLAPRGGSPRS 463 >gi|167234419 thyroid hormone receptor associated protein 3 [Homo sapiens] Length = 955 Score = 33.5 bits (75), Expect = 0.34 Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 5/74 (6%) Query: 317 SASMTRLMRSRTASGSSVTSLDGTRSRSHTSEGTRSRSHTSEGTRSRS----HTSEGAHL 372 S S +R RSR+AS S S +RSRS + +R R S +RSRS H E H Sbjct: 7 SKSGSRSSRSRSASRSRSRSFSKSRSRSRSLSRSRKR-RLSSRSRSRSYSPAHNRERNHP 65 Query: 373 DITPNSGAAGNSAG 386 + N G++ G Sbjct: 66 RVYQNRDFRGHNRG 79 >gi|239742580 PREDICTED: similar to Putative POM121-like protein 1-like [Homo sapiens] Length = 897 Score = 33.1 bits (74), Expect = 0.45 Identities = 36/136 (26%), Positives = 55/136 (40%), Gaps = 6/136 (4%) Query: 232 NSRRDLEIERPMPGTHTVTLQCPALLVV--GDSSPAVDAVVECNSKLDPTKTTLLKMADC 289 +SR ++ +P T T + + G S+PA A S L+PT +LL D Sbjct: 568 HSRDSAQVTSLIPATFTAASRDAGMRRTRPGTSAPAAAAAALPPSTLNPTSGSLLNAVDG 627 Query: 290 GGLPQISQPAKLAEAFKYFVQGMGYMPSASMTRLMRSRTASGSSVTSLDG---TRSRSHT 346 G ++ A A + V+ S TR R AS SS +S +G + R Sbjct: 628 GPSHFLASATAAARAQRSEVR-YNQRSQTSRTRSCLKRNASSSSHSSTEGLQELKRRRGP 686 Query: 347 SEGTRSRSHTSEGTRS 362 + +H+S T S Sbjct: 687 ASSHCQLAHSSSNTVS 702 >gi|239740827 PREDICTED: hypothetical protein XP_002344067 [Homo sapiens] Length = 1521 Score = 32.0 bits (71), Expect = 1.00 Identities = 15/68 (22%), Positives = 37/68 (54%) Query: 326 SRTASGSSVTSLDGTRSRSHTSEGTRSRSHTSEGTRSRSHTSEGAHLDITPNSGAAGNSA 385 S T S +++TS +G+ + + G+ + + ++EG+ + + ++EG+ +G+ +A Sbjct: 706 STTGSETTITSTEGSEITTASITGSETTTASTEGSETTTASTEGSETTSASTTGSETTTA 765 Query: 386 GPKSMEVS 393 S E + Sbjct: 766 STTSSETT 773 Score = 30.4 bits (67), Expect = 2.9 Identities = 13/68 (19%), Positives = 37/68 (54%) Query: 326 SRTASGSSVTSLDGTRSRSHTSEGTRSRSHTSEGTRSRSHTSEGAHLDITPNSGAAGNSA 385 S T + +++TS +G+ + + T+ G+ + + + G+ + + ++EG+ +G+ +A Sbjct: 1017 STTGTETTITSTEGSETTTVTTAGSETTAVYTTGSETTTTSTEGSETTTVSTTGSETTTA 1076 Query: 386 GPKSMEVS 393 +E + Sbjct: 1077 STADLETT 1084 Score = 29.3 bits (64), Expect = 6.5 Identities = 12/68 (17%), Positives = 38/68 (55%) Query: 326 SRTASGSSVTSLDGTRSRSHTSEGTRSRSHTSEGTRSRSHTSEGAHLDITPNSGAAGNSA 385 S +S ++ + G+ + + ++EG+ + + ++EG+ + + ++EG+ + +G+ +A Sbjct: 867 STESSETTTATTIGSETTTASTEGSETTTTSTEGSETTTASTEGSEITTVSTTGSETTTA 926 Query: 386 GPKSMEVS 393 + E + Sbjct: 927 STEGSETT 934 >gi|116089325 splicing factor, arginine/serine-rich 12 isoform a [Homo sapiens] Length = 624 Score = 32.0 bits (71), Expect = 1.00 Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 17/107 (15%) Query: 278 PTKTTLLKMADCGGLPQI---------SQPAKLAEAFKYFVQGMGYMPSASMTRL----M 324 PT+ ++ AD +P+ +P K+ + V+ P A+ L Sbjct: 221 PTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMK 280 Query: 325 RSRTASGSSVTSLDGTRSRSHTSEGTRSRSHTSEGTRSRSHTSEGAH 371 R R A +++ +S+ +G RSRSH TRS+S +S +H Sbjct: 281 RVREAQSFISAAIEPESGKSNERKGGRSRSH----TRSKSRSSSKSH 323 >gi|21040255 splicing factor, arginine/serine-rich 12 isoform b [Homo sapiens] Length = 508 Score = 32.0 bits (71), Expect = 1.00 Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 17/107 (15%) Query: 278 PTKTTLLKMADCGGLPQI---------SQPAKLAEAFKYFVQGMGYMPSASMTRL----M 324 PT+ ++ AD +P+ +P K+ + V+ P A+ L Sbjct: 105 PTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMK 164 Query: 325 RSRTASGSSVTSLDGTRSRSHTSEGTRSRSHTSEGTRSRSHTSEGAH 371 R R A +++ +S+ +G RSRSH TRS+S +S +H Sbjct: 165 RVREAQSFISAAIEPESGKSNERKGGRSRSH----TRSKSRSSSKSH 207 >gi|20127499 arginine/serine-rich splicing factor 6 [Homo sapiens] Length = 344 Score = 31.2 bits (69), Expect = 1.7 Identities = 18/45 (40%), Positives = 24/45 (53%) Query: 322 RLMRSRTASGSSVTSLDGTRSRSHTSEGTRSRSHTSEGTRSRSHT 366 R R+ SGS S RSRS + +RSRS + +RSRS + Sbjct: 184 RTSHRRSYSGSRSRSRSRRRSRSRSRRSSRSRSRSISKSRSRSRS 228 Score = 31.2 bits (69), Expect = 1.7 Identities = 20/58 (34%), Positives = 27/58 (46%) Query: 336 SLDGTRSRSHTSEGTRSRSHTSEGTRSRSHTSEGAHLDITPNSGAAGNSAGPKSMEVS 393 S G+RSRS + +RSRS S +RSRS + + + S G KS S Sbjct: 190 SYSGSRSRSRSRRRSRSRSRRSSRSRSRSISKSRSRSRSRSKGRSRSRSKGRKSRSKS 247 Score = 29.6 bits (65), Expect = 4.9 Identities = 21/65 (32%), Positives = 31/65 (47%) Query: 325 RSRTASGSSVTSLDGTRSRSHTSEGTRSRSHTSEGTRSRSHTSEGAHLDITPNSGAAGNS 384 RS + S S S +RSRS S +RSRS + +RSRS + + + + Sbjct: 189 RSYSGSRSRSRSRRRSRSRSRRSSRSRSRSISKSRSRSRSRSKGRSRSRSKGRKSRSKSK 248 Query: 385 AGPKS 389 + PKS Sbjct: 249 SKPKS 253 >gi|151301154 mucin 6, gastric [Homo sapiens] Length = 2439 Score = 31.2 bits (69), Expect = 1.7 Identities = 19/50 (38%), Positives = 26/50 (52%) Query: 329 ASGSSVTSLDGTRSRSHTSEGTRSRSHTSEGTRSRSHTSEGAHLDITPNS 378 A+GS+ T+ T + S TS+ S S T SHTS H ++TP S Sbjct: 1492 ATGSTHTAPPITPTTSGTSQAHSSFSTNKTPTSLHSHTSSTHHPEVTPTS 1541 Score = 29.6 bits (65), Expect = 4.9 Identities = 18/50 (36%), Positives = 25/50 (50%) Query: 329 ASGSSVTSLDGTRSRSHTSEGTRSRSHTSEGTRSRSHTSEGAHLDITPNS 378 A+GS+ T+ T + S TS+ S S T HTS H ++TP S Sbjct: 1885 ATGSTHTAPPMTPTTSGTSQSPSSFSTAKTSTSLPYHTSSTHHPEVTPTS 1934 >gi|55743106 alpha 3 type VI collagen isoform 5 precursor [Homo sapiens] Length = 2971 Score = 30.8 bits (68), Expect = 2.2 Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 3/48 (6%) Query: 5 MQDVDLAEVKPLVEKGETI--TGLLQEF-DVQEQDIETLHGSVHVTLC 49 ++++D EV + T G +QE ++ EQ +ETLH ++H TLC Sbjct: 1572 VRNIDSEEVGKIASNSATAFRVGNVQELSELSEQVLETLHDAMHETLC 1619 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.316 0.131 0.389 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 15,613,978 Number of Sequences: 37866 Number of extensions: 713607 Number of successful extensions: 2858 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 41 Number of HSP's successfully gapped in prelim test: 35 Number of HSP's that attempted gapping in prelim test: 2259 Number of HSP's gapped (non-prelim): 540 length of query: 394 length of database: 18,247,518 effective HSP length: 104 effective length of query: 290 effective length of database: 14,309,454 effective search space: 4149741660 effective search space used: 4149741660 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.