Guide to the Human Genome
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Name: NDRG1 Sequence: fasta or formatted (394aa) NCBI GI: 37655183
Description:

N-myc downstream regulated 1

Referenced in:

Myc and Related Functions

Other entries for this name:
alt mRNA [394aa] N-myc downstream regulated 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         28           2
 C cysteine            2.0          8           1
 D aspartate           4.8         19           1
 E glutamate           6.1         24           2
 F phenylalanine       2.5         10           1
 G glycine             8.6         34           2
 H histidine           3.8         15           1
 I isoleucine          3.8         15           2
 K lysine              3.3         13           1
 L leucine             8.1         32           2
 M methionine          5.1         20           1
 N asparagine          4.3         17           2
 P proline             5.6         22           1
 Q glutamine           4.6         18           2
 R arginine            4.1         16           2
 S serine              8.6         34           2
 T threonine           7.1         28           2
 V valine              7.1         28           2
 W tryptophan          0.8          3           1
 Y tyrosine            2.5         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   N-myc downstream regulated 1 
NDRG1                 1.000   N-myc downstream regulated 1 
NDRG3                 0.587   N-myc downstream-regulated gene 3 isoform a 
NDRG3                 0.571   N-myc downstream-regulated gene 3 isoform b 
NDRG4                 0.541   NDRG family member 4 isoform 2 
NDRG4                 0.541   NDRG family member 4 isoform 1 
NDRG4                 0.541   NDRG family member 4 isoform 1 
NDRG2                 0.481   N-myc downstream-regulated gene 2 isoform b 
NDRG2                 0.481   N-myc downstream-regulated gene 2 isoform a 
NDRG2                 0.481   N-myc downstream-regulated gene 2 isoform a 
NDRG2                 0.481   N-myc downstream-regulated gene 2 isoform b 
NDRG2                 0.481   N-myc downstream-regulated gene 2 isoform a 
NDRG2                 0.481   N-myc downstream-regulated gene 2 isoform b 
NDRG2                 0.481   N-myc downstream-regulated gene 2 isoform b 
NDRG2                 0.481   N-myc downstream-regulated gene 2 isoform a 
SFRS4                 0.013   splicing factor, arginine/serine-rich 4 
ABHD11                0.013   abhydrolase domain containing 11 isoform 1 
ABHD11                0.013   abhydrolase domain containing 11 isoform 2 
ZRANB2                0.013   zinc finger protein 265 isoform 1 
ZRANB2                0.013   zinc finger protein 265 isoform 2 
LRBA                  0.012   LPS-responsive vesicle trafficking, beach and ancho...
LOC729915             0.012   PREDICTED: similar to Putative POM121-like protein ...
THRAP3                0.010   thyroid hormone receptor associated protein 3 [Homo...
LOC100133280          0.010   PREDICTED: similar to Putative POM121-like protein ...
LOC100294249          0.009   PREDICTED: hypothetical protein XP_002344067 
SFRS12                0.009   splicing factor, arginine/serine-rich 12 isoform a ...
SFRS12                0.009   splicing factor, arginine/serine-rich 12 isoform b [...
SFRS6                 0.008   arginine/serine-rich splicing factor 6 
MUC6                  0.008   mucin 6, gastric 
COL6A3                0.008   alpha 3 type VI collagen isoform 5 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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