Guide to the Human Genome
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Name: NDRG2 Sequence: fasta or formatted (371aa) NCBI GI: 42544222
Description:

N-myc downstream-regulated gene 2 isoform a

Referenced in:

Myc and Related Functions

Other entries for this name:
alt prot [357aa] N-myc downstream-regulated gene 2 isoform b
alt mRNA [371aa] N-myc downstream-regulated gene 2 isoform a
alt prot [357aa] N-myc downstream-regulated gene 2 isoform b
alt mRNA [371aa] N-myc downstream-regulated gene 2 isoform a
alt prot [357aa] N-myc downstream-regulated gene 2 isoform b
alt mRNA [371aa] N-myc downstream-regulated gene 2 isoform a
alt prot [357aa] N-myc downstream-regulated gene 2 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         26           2
 C cysteine            1.6          6           1
 D aspartate           4.6         17           1
 E glutamate           6.5         24           2
 F phenylalanine       3.2         12           1
 G glycine             7.8         29           2
 H histidine           2.4          9           1
 I isoleucine          4.9         18           2
 K lysine              3.2         12           1
 L leucine            10.2         38           2
 M methionine          3.2         12           1
 N asparagine          4.3         16           2
 P proline             6.5         24           2
 Q glutamine           5.7         21           1
 R arginine            4.0         15           2
 S serine              8.1         30           2
 T threonine           6.5         24           1
 V valine              5.7         21           2
 W tryptophan          0.8          3           1
 Y tyrosine            3.8         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   N-myc downstream-regulated gene 2 isoform a 
NDRG2                 1.000   N-myc downstream-regulated gene 2 isoform a 
NDRG2                 1.000   N-myc downstream-regulated gene 2 isoform a 
NDRG2                 1.000   N-myc downstream-regulated gene 2 isoform a 
NDRG2                 0.952   N-myc downstream-regulated gene 2 isoform b 
NDRG2                 0.952   N-myc downstream-regulated gene 2 isoform b 
NDRG2                 0.952   N-myc downstream-regulated gene 2 isoform b 
NDRG2                 0.952   N-myc downstream-regulated gene 2 isoform b 
NDRG4                 0.604   NDRG family member 4 isoform 2 
NDRG4                 0.604   NDRG family member 4 isoform 1 
NDRG4                 0.604   NDRG family member 4 isoform 1 
NDRG3                 0.521   N-myc downstream-regulated gene 3 isoform a 
NDRG3                 0.519   N-myc downstream-regulated gene 3 isoform b 
NDRG1                 0.514   N-myc downstream regulated 1 
NDRG1                 0.514   N-myc downstream regulated 1 
THRAP3                0.010   thyroid hormone receptor associated protein 3 [Homo...
NT5C1B                0.007   5' nucleotidase, cytosolic IB isoform 1 
NT5C1B                0.007   5' nucleotidase, cytosolic IB isoform 2 
ING3                  0.006   inhibitor of growth family, member 3 isoform 1 [Homo...
HNMT                  0.006   histamine N-methyltransferase isoform 1 
RLTPR                 0.006   RGD motif, leucine rich repeats, tropomodulin domain...
CLASP1                0.006   CLIP-associating protein 1 isoform 3 
CLASP1                0.006   CLIP-associating protein 1 isoform 1 
KLF15                 0.006   Kruppel-like factor 15 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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