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Search of human proteins with 37537704
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|37537704 glutaredoxin 2 isoform 2 [Homo sapiens]
(164 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|37537704 glutaredoxin 2 isoform 2 [Homo sapiens] 332 9e-92
gi|21361507 glutaredoxin 2 isoform 1 [Homo sapiens] 261 2e-70
gi|148277071 thioredoxin reductase 1 isoform 3 [Homo sapiens] 65 2e-11
gi|169646776 glutaredoxin (thioltransferase) [Homo sapiens] 62 3e-10
gi|4504025 glutaredoxin (thioltransferase) [Homo sapiens] 62 3e-10
gi|122937349 glutaredoxin, cysteine rich 1 [Homo sapiens] 41 5e-04
gi|95113651 glutaredoxin 3 [Homo sapiens] 34 0.065
gi|42516576 glutaredoxin 5 [Homo sapiens] 32 0.32
gi|151301228 formin binding protein 3 [Homo sapiens] 30 0.72
gi|148277065 thioredoxin reductase 1 isoform 1 [Homo sapiens] 29 1.6
gi|239754942 PREDICTED: hypothetical protein [Homo sapiens] 29 2.1
gi|239749484 PREDICTED: hypothetical protein [Homo sapiens] 29 2.1
gi|239743622 PREDICTED: hypothetical protein XP_002342908 [Homo ... 29 2.1
gi|7657345 mitochondrial carrier homolog 1 [Homo sapiens] 29 2.1
gi|222418604 hypothetical protein LOC257407 [Homo sapiens] 28 3.6
gi|119709834 castor homolog 1, zinc finger isoform a [Homo sapiens] 28 3.6
gi|226371735 iroquois homeobox 3 [Homo sapiens] 28 3.6
gi|50592994 thioredoxin [Homo sapiens] 28 3.6
gi|108860692 prolyl endopeptidase-like isoform D [Homo sapiens] 28 4.6
gi|156105693 PPAR-alpha interacting complex protein 285 isoform ... 28 4.6
gi|156105695 PPAR-alpha interacting complex protein 285 isoform ... 28 4.6
gi|6912372 forkhead box D3 [Homo sapiens] 27 7.9
gi|228008410 BEN domain containing 4 isoform b [Homo sapiens] 27 7.9
gi|148762950 BEN domain containing 4 isoform a [Homo sapiens] 27 7.9
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 27 7.9
gi|46275837 CCR4-NOT transcription complex, subunit 1 isoform b ... 27 7.9
gi|42716275 CCR4-NOT transcription complex, subunit 1 isoform a ... 27 7.9
>gi|37537704 glutaredoxin 2 isoform 2 [Homo sapiens]
Length = 164
Score = 332 bits (851), Expect = 9e-92
Identities = 164/164 (100%), Positives = 164/164 (100%)
Query: 1 MIWRRAALAGTRLVWSRSGSAGWLDRAAGAAGAAAAAASGMESNTSSSLENLATAPVNQI 60
MIWRRAALAGTRLVWSRSGSAGWLDRAAGAAGAAAAAASGMESNTSSSLENLATAPVNQI
Sbjct: 1 MIWRRAALAGTRLVWSRSGSAGWLDRAAGAAGAAAAAASGMESNTSSSLENLATAPVNQI 60
Query: 61 QETISDNCVVIFSKTSCSYCTMAKKLFHDMNVNYKVVELDLLEYGNQFQDALYKMTGERT 120
QETISDNCVVIFSKTSCSYCTMAKKLFHDMNVNYKVVELDLLEYGNQFQDALYKMTGERT
Sbjct: 61 QETISDNCVVIFSKTSCSYCTMAKKLFHDMNVNYKVVELDLLEYGNQFQDALYKMTGERT 120
Query: 121 VPRIFVNGTFIGGATDTHRLHKEGKLLPLVHQCYLKKSKRKEFQ 164
VPRIFVNGTFIGGATDTHRLHKEGKLLPLVHQCYLKKSKRKEFQ
Sbjct: 121 VPRIFVNGTFIGGATDTHRLHKEGKLLPLVHQCYLKKSKRKEFQ 164
>gi|21361507 glutaredoxin 2 isoform 1 [Homo sapiens]
Length = 165
Score = 261 bits (666), Expect = 2e-70
Identities = 128/137 (93%), Positives = 131/137 (95%)
Query: 28 AGAAGAAAAAASGMESNTSSSLENLATAPVNQIQETISDNCVVIFSKTSCSYCTMAKKLF 87
+G+ G +AA MESNTSSSLENLATAPVNQIQETISDNCVVIFSKTSCSYCTMAKKLF
Sbjct: 29 SGSPGRTRSAARRMESNTSSSLENLATAPVNQIQETISDNCVVIFSKTSCSYCTMAKKLF 88
Query: 88 HDMNVNYKVVELDLLEYGNQFQDALYKMTGERTVPRIFVNGTFIGGATDTHRLHKEGKLL 147
HDMNVNYKVVELDLLEYGNQFQDALYKMTGERTVPRIFVNGTFIGGATDTHRLHKEGKLL
Sbjct: 89 HDMNVNYKVVELDLLEYGNQFQDALYKMTGERTVPRIFVNGTFIGGATDTHRLHKEGKLL 148
Query: 148 PLVHQCYLKKSKRKEFQ 164
PLVHQCYLKKSKRKEFQ
Sbjct: 149 PLVHQCYLKKSKRKEFQ 165
>gi|148277071 thioredoxin reductase 1 isoform 3 [Homo sapiens]
Length = 649
Score = 65.5 bits (158), Expect = 2e-11
Identities = 35/91 (38%), Positives = 53/91 (58%)
Query: 60 IQETISDNCVVIFSKTSCSYCTMAKKLFHDMNVNYKVVELDLLEYGNQFQDALYKMTGER 119
+Q I + VVIFS+++C+ CT KKLF + V Y V+ELD E G + L ++ E
Sbjct: 59 LQAYIDGHSVVIFSRSTCTRCTEVKKLFKSLCVPYFVLELDQTEDGRALEGTLSELAAET 118
Query: 120 TVPRIFVNGTFIGGATDTHRLHKEGKLLPLV 150
+P +FV IGG T + ++EG+L L+
Sbjct: 119 DLPVVFVKQRKIGGHGPTLKAYQEGRLQKLL 149
>gi|169646776 glutaredoxin (thioltransferase) [Homo sapiens]
Length = 106
Score = 61.6 bits (148), Expect = 3e-10
Identities = 30/87 (34%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 69 VVIFSKTSCSYCTMAKKLFHDMNVNY---KVVELDLLEYGNQFQDALYKMTGERTVPRIF 125
VV+F K +C YC A+++ + + + V++ + N+ QD L ++TG RTVPR+F
Sbjct: 15 VVVFIKPTCPYCRRAQEILSQLPIKQGLLEFVDITATNHTNEIQDYLQQLTGARTVPRVF 74
Query: 126 VNGTFIGGATDTHRLHKEGKLLPLVHQ 152
+ IGG +D L + G+LL + Q
Sbjct: 75 IGKDCIGGCSDLVSLQQSGELLTRLKQ 101
>gi|4504025 glutaredoxin (thioltransferase) [Homo sapiens]
Length = 106
Score = 61.6 bits (148), Expect = 3e-10
Identities = 30/87 (34%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 69 VVIFSKTSCSYCTMAKKLFHDMNVNY---KVVELDLLEYGNQFQDALYKMTGERTVPRIF 125
VV+F K +C YC A+++ + + + V++ + N+ QD L ++TG RTVPR+F
Sbjct: 15 VVVFIKPTCPYCRRAQEILSQLPIKQGLLEFVDITATNHTNEIQDYLQQLTGARTVPRVF 74
Query: 126 VNGTFIGGATDTHRLHKEGKLLPLVHQ 152
+ IGG +D L + G+LL + Q
Sbjct: 75 IGKDCIGGCSDLVSLQQSGELLTRLKQ 101
>gi|122937349 glutaredoxin, cysteine rich 1 [Homo sapiens]
Length = 290
Score = 40.8 bits (94), Expect = 5e-04
Identities = 24/110 (21%), Positives = 56/110 (50%), Gaps = 7/110 (6%)
Query: 44 NTSSSLENLATAPVNQIQETISDNCVVIFS------KTSCSYCTMAKKLFHDMNVNYKVV 97
+ +L N T + Q + + VVI++ +T+ C + +K+F + V ++
Sbjct: 114 SAGQALFNNLTKVLQQPSTDLEFDRVVIYTTCLRVVRTTFERCELVRKIFQNHRVKFEEK 173
Query: 98 ELDLL-EYGNQFQDALYKMTGERTVPRIFVNGTFIGGATDTHRLHKEGKL 146
+ L EYG + + +++ ++P +F++G ++GGA +++ G+L
Sbjct: 174 NIALNGEYGKELDERCRRVSEAPSLPVVFIDGHYLGGAEKILSMNESGEL 223
>gi|95113651 glutaredoxin 3 [Homo sapiens]
Length = 335
Score = 33.9 bits (76), Expect = 0.065
Identities = 18/77 (23%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 74 KTSCSYCTMAKKLFHDMNVNYKVVELDLLEYGNQFQDALYKMTGERTVPRIFVNGTFIGG 133
+ C + ++ + V Y+ D+LE + + L + T P+++V G +GG
Sbjct: 258 EAKCGFSKQILEILNSTGVEYET--FDILE-DEEVRQGLKAYSNWPTYPQLYVKGELVGG 314
Query: 134 ATDTHRLHKEGKLLPLV 150
L + G+LLP++
Sbjct: 315 LDIVKELKENGELLPIL 331
>gi|42516576 glutaredoxin 5 [Homo sapiens]
Length = 157
Score = 31.6 bits (70), Expect = 0.32
Identities = 32/149 (21%), Positives = 56/149 (37%), Gaps = 32/149 (21%)
Query: 9 AGTRLVWSR-SGSAGWLDRAAGAAGAAAAAASGMESNTSSSLENLATAPVNQIQETISDN 67
A L W R +G G AAG+ A E Q+ + +
Sbjct: 9 AAALLRWGRGAGGGGLWGPGVRAAGSGAGGGGSAE----------------QLDALVKKD 52
Query: 68 CVVIFSKTS-----CSYCTMAKKLFHDMNVN----YKVVELDLLEYGNQFQDALYKMTGE 118
VV+F K + C + ++ V Y V++ L G + +
Sbjct: 53 KVVVFLKGTPEQPQCGFSNAVVQILRLHGVRDYAAYNVLDDPELRQG------IKDYSNW 106
Query: 119 RTVPRIFVNGTFIGGATDTHRLHKEGKLL 147
T+P++++NG F+GG ++H+ G L+
Sbjct: 107 PTIPQVYLNGEFVGGCDILLQMHQNGDLV 135
>gi|151301228 formin binding protein 3 [Homo sapiens]
Length = 930
Score = 30.4 bits (67), Expect = 0.72
Identities = 20/55 (36%), Positives = 29/55 (52%)
Query: 27 AAGAAGAAAAAASGMESNTSSSLENLATAPVNQIQETISDNCVVIFSKTSCSYCT 81
AA AA AAAAAA+ ++TS+S T PV E S V+ ++ + + T
Sbjct: 255 AAAAAAAAAAAAANANASTSASNTVSGTVPVVPEPEVTSIVATVVDNENTVTIST 309
>gi|148277065 thioredoxin reductase 1 isoform 1 [Homo sapiens]
Length = 551
Score = 29.3 bits (64), Expect = 1.6
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 103 EYGNQFQDALYKMTGERTVPRIFVNGTFIGGATDTHRLHKEGKLLPLV 150
E G + L ++ E +P +FV IGG T + ++EG+L L+
Sbjct: 4 EDGRALEGTLSELAAETDLPVVFVKQRKIGGHGPTLKAYQEGRLQKLL 51
>gi|239754942 PREDICTED: hypothetical protein [Homo sapiens]
Length = 145
Score = 28.9 bits (63), Expect = 2.1
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Query: 15 WSRS--GSAGWLDRAAGAAGAAAAAASGMESNTSSSL 49
WSR+ G G +G GAAA AAS +NT S+
Sbjct: 66 WSRTTLGKRGGNSTGSGGTGAAAGAASSAGTNTYKSM 102
>gi|239749484 PREDICTED: hypothetical protein [Homo sapiens]
Length = 145
Score = 28.9 bits (63), Expect = 2.1
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Query: 15 WSRS--GSAGWLDRAAGAAGAAAAAASGMESNTSSSL 49
WSR+ G G +G GAAA AAS +NT S+
Sbjct: 66 WSRTTLGKRGGNSTGSGGTGAAAGAASSAGTNTYKSM 102
>gi|239743622 PREDICTED: hypothetical protein XP_002342908 [Homo
sapiens]
Length = 145
Score = 28.9 bits (63), Expect = 2.1
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Query: 15 WSRS--GSAGWLDRAAGAAGAAAAAASGMESNTSSSL 49
WSR+ G G +G GAAA AAS +NT S+
Sbjct: 66 WSRTTLGKRGGNSTGSGGTGAAAGAASSAGTNTYKSM 102
>gi|7657345 mitochondrial carrier homolog 1 [Homo sapiens]
Length = 372
Score = 28.9 bits (63), Expect = 2.1
Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Query: 15 WSRSGSAGWLDRAAGAAGAAAAAASGMES 43
W+R G+AG AG AGA AA+G+E+
Sbjct: 11 WARGGAAGMAGAGAG-AGARGGAAAGVEA 38
>gi|222418604 hypothetical protein LOC257407 [Homo sapiens]
Length = 295
Score = 28.1 bits (61), Expect = 3.6
Identities = 14/18 (77%), Positives = 15/18 (83%)
Query: 26 RAAGAAGAAAAAASGMES 43
RAAGAAGAAAAAA + S
Sbjct: 87 RAAGAAGAAAAAARAIRS 104
>gi|119709834 castor homolog 1, zinc finger isoform a [Homo sapiens]
Length = 1759
Score = 28.1 bits (61), Expect = 3.6
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
Query: 1 MIWRRAALAGTRLVWSRSGSAGWLDRAA-----GAAGAAAAAASGMESNTSSSLE 50
+++ ++A AG L +G G D AA GAA AAAAA + + LE
Sbjct: 1629 LLFLQSAAAGLGLALGDAGDPGPPDAAAPGPREGAAAAAAAAGESSQEDEEEELE 1683
>gi|226371735 iroquois homeobox 3 [Homo sapiens]
Length = 501
Score = 28.1 bits (61), Expect = 3.6
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 17 RSGSAGWLDRAAGAAGAAAAAASGMESNTSSSLENLATA 55
R G+AG +AGA G A AS E N S SL N+ ++
Sbjct: 19 RPGAAGGSGGSAGARGGLGAGAS--ELNASGSLSNVLSS 55
>gi|50592994 thioredoxin [Homo sapiens]
Length = 105
Score = 28.1 bits (61), Expect = 3.6
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 69 VVIFSKTSCSYCTMAKKLFHDMNVNYKVV 97
VV FS T C C M K FH ++ Y V
Sbjct: 24 VVDFSATWCGPCKMIKPFFHSLSEKYSNV 52
>gi|108860692 prolyl endopeptidase-like isoform D [Homo sapiens]
Length = 661
Score = 27.7 bits (60), Expect = 4.6
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 10/64 (15%)
Query: 86 LFHDMNVNYKVVELDLLEYGNQFQDALYKMTGERTVPRIFVNGTFIGGATDTHRLHKEGK 145
LF M N KV++LD+ F+D + ++VN IG A D+ R K+GK
Sbjct: 339 LFFTMKRNTKVIDLDM------FKDHCVLFLKHSNL--LYVN--VIGLADDSVRSLKDGK 388
Query: 146 LLPL 149
L+P+
Sbjct: 389 LVPM 392
>gi|156105693 PPAR-alpha interacting complex protein 285 isoform 1
[Homo sapiens]
Length = 2649
Score = 27.7 bits (60), Expect = 4.6
Identities = 17/45 (37%), Positives = 22/45 (48%)
Query: 6 AALAGTRLVWSRSGSAGWLDRAAGAAGAAAAAASGMESNTSSSLE 50
A A T + +G A D GA A AAAA+G+ES + E
Sbjct: 1014 ATTAQTEAAAAPAGDAVKEDVVPGACAAGAAAAAGVESTEAEDAE 1058
>gi|156105695 PPAR-alpha interacting complex protein 285 isoform 2
[Homo sapiens]
Length = 2080
Score = 27.7 bits (60), Expect = 4.6
Identities = 17/45 (37%), Positives = 22/45 (48%)
Query: 6 AALAGTRLVWSRSGSAGWLDRAAGAAGAAAAAASGMESNTSSSLE 50
A A T + +G A D GA A AAAA+G+ES + E
Sbjct: 445 ATTAQTEAAAAPAGDAVKEDVVPGACAAGAAAAAGVESTEAEDAE 489
>gi|6912372 forkhead box D3 [Homo sapiens]
Length = 478
Score = 26.9 bits (58), Expect = 7.9
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 7/56 (12%)
Query: 4 RRAALAGTRL---VWSRSGSAGWLDRAAGAAGAAAAAASGMESNTSS----SLENL 52
R+AA G++L + + S G AAG AGAA AS ++S S+ S+EN+
Sbjct: 328 RKAAAFGSQLGPGLQLQLNSLGAAAAAAGTAGAAGTTASLIKSEPSARPSFSIENI 383
>gi|228008410 BEN domain containing 4 isoform b [Homo sapiens]
Length = 441
Score = 26.9 bits (58), Expect = 7.9
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 32 GAAAAAASGMESNTSSSLENLATAPVNQIQETISDNCVVIFSKTSC 77
GAAAAA +G + S+SLE +A I + + C + S +C
Sbjct: 141 GAAAAAGTGGTGSDSASLE--LSAESRMILDAFAQQCSRVLSLLNC 184
>gi|148762950 BEN domain containing 4 isoform a [Homo sapiens]
Length = 534
Score = 26.9 bits (58), Expect = 7.9
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 32 GAAAAAASGMESNTSSSLENLATAPVNQIQETISDNCVVIFSKTSC 77
GAAAAA +G + S+SLE +A I + + C + S +C
Sbjct: 141 GAAAAAGTGGTGSDSASLE--LSAESRMILDAFAQQCSRVLSLLNC 184
>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
Length = 2161
Score = 26.9 bits (58), Expect = 7.9
Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Query: 6 AALAGTRLVWSRSGSAGWLDRAAGAAGAAAAAASGMESN--TSSSLENLATAPVNQI 60
++ AG L W+R GS G D G A S ++ + S +L + PV+ +
Sbjct: 1884 SSAAGGALPWARGGSGGGGDSHHGGASYVPERTSSLQRQRLSDDSQSSLLSKPVSSL 1940
>gi|46275837 CCR4-NOT transcription complex, subunit 1 isoform b [Homo
sapiens]
Length = 1551
Score = 26.9 bits (58), Expect = 7.9
Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Query: 79 YCTMAKKLFHDMNVNYKVVELDLLEYGNQFQDALYKMTGERTVP 122
YC + H M + + E +EYG Q +D KM G T P
Sbjct: 971 YCQHLASISHFMQFPHHLQEY--IEYGQQSRDPPVKMQGSITTP 1012
>gi|42716275 CCR4-NOT transcription complex, subunit 1 isoform a [Homo
sapiens]
Length = 2376
Score = 26.9 bits (58), Expect = 7.9
Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Query: 79 YCTMAKKLFHDMNVNYKVVELDLLEYGNQFQDALYKMTGERTVP 122
YC + H M + + E +EYG Q +D KM G T P
Sbjct: 971 YCQHLASISHFMQFPHHLQEY--IEYGQQSRDPPVKMQGSITTP 1012
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.130 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,578,765
Number of Sequences: 37866
Number of extensions: 206307
Number of successful extensions: 1371
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 1342
Number of HSP's gapped (non-prelim): 35
length of query: 164
length of database: 18,247,518
effective HSP length: 94
effective length of query: 70
effective length of database: 14,688,114
effective search space: 1028167980
effective search space used: 1028167980
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Table of Contents |
Search text |
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.