Guide to the Human Genome
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Name: MTCH1 Sequence: fasta or formatted (372aa) NCBI GI: 7657345
Description:

mitochondrial carrier homolog 1

Referenced in:

Mitochondria

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.9         37           3
 C cysteine            1.6          6           1
 D aspartate           3.2         12           2
 E glutamate           3.2         12           2
 F phenylalanine       4.8         18           2
 G glycine            11.0         41           2
 H histidine           2.7         10           1
 I isoleucine          3.2         12           1
 K lysine              4.6         17           2
 L leucine            11.0         41           2
 M methionine          4.3         16           3
 N asparagine          2.2          8           2
 P proline             6.5         24           3
 Q glutamine           2.7         10           1
 R arginine            5.4         20           2
 S serine              8.1         30           2
 T threonine           3.2         12           2
 V valine              8.3         31           2
 W tryptophan          1.1          4           1
 Y tyrosine            3.0         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitochondrial carrier homolog 1 
MTCH2                 0.383   mitochondrial carrier 2 
SLC25A24              0.032   solute carrier family 25 member 24 isoform 1 
SLC25A24              0.032   solute carrier family 25 member 24 isoform 2 
SLC25A32              0.025   solute carrier family 25, member 32 
MNX1                  0.022   homeo box HB9 
SLC25A16              0.022   solute carrier family 25, member 16 
SLC25A11              0.021   solute carrier family 25 (mitochondrial carrier; oxo...
UCP3                  0.021   uncoupling protein 3 isoform UCP3S 
UCP3                  0.021   uncoupling protein 3 isoform UCP3L 
SLC25A21              0.021   solute carrier family 25 (mitochondrial oxodicarboxy...
UCP1                  0.019   uncoupling protein 1 
XYLT1                 0.019   xylosyltransferase I 
LOC100130897          0.019   PREDICTED: hypothetical protein 
LOC100130897          0.019   PREDICTED: hypothetical protein 
SLC25A19              0.019   solute carrier family 25, member 19 
SLC25A19              0.019   solute carrier family 25, member 19 
SLC25A19              0.019   solute carrier family 25, member 19 
RANBP9                0.019   RAN binding protein 9 
LOC100293268          0.019   PREDICTED: hypothetical protein 
LOC100291136          0.018   PREDICTED: hypothetical protein XP_002347630 
LOC100287129          0.018   PREDICTED: hypothetical protein XP_002343480 
NEUROG2               0.018   neurogenin 2 
FAM171A2              0.017   family with sequence similarity 171, member A2 [Hom...
LOC100129463          0.017   PREDICTED: hypothetical protein 
LOC100129463          0.017   PREDICTED: hypothetical protein 
LOC100129463          0.017   PREDICTED: hypothetical protein 
LOC100129463          0.017   PREDICTED: hypothetical protein 
CDH22                 0.017   cadherin 22 precursor 
POU3F3                0.017   POU class 3 homeobox 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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