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Search of human proteins with 33356172
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|33356172 nibrin [Homo sapiens]
(754 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|33356172 nibrin [Homo sapiens] 1506 0.0
gi|109255230 centrosomal protein 170kDa isoform beta [Homo sapiens] 53 9e-07
gi|109255232 centrosomal protein 170kDa isoform gamma [Homo sapi... 53 9e-07
gi|208022632 coiled-coil domain containing 88A isoform 1 [Homo s... 49 2e-05
gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo... 48 3e-05
gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo... 48 4e-05
gi|153792663 myosin, heavy chain 2, skeletal muscle, adult [Homo... 48 4e-05
gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [... 47 5e-05
gi|110611903 myosin, heavy polypeptide 4, skeletal muscle [Homo ... 47 5e-05
gi|134948605 ankyrin repeat domain 12 isoform 2 [Homo sapiens] 46 1e-04
gi|134948558 ankyrin repeat domain 12 isoform 1 [Homo sapiens] 46 1e-04
gi|217330641 IWS1 homolog [Homo sapiens] 45 2e-04
gi|109255228 centrosomal protein 170kDa isoform alpha [Homo sapi... 45 2e-04
gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo sap... 44 4e-04
gi|118498362 kinectin 1 isoform b [Homo sapiens] 44 6e-04
gi|150010558 myosin, heavy polypeptide 15 [Homo sapiens] 43 0.001
gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo sa... 42 0.002
gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [H... 42 0.002
gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1... 42 0.002
gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ... 42 0.002
gi|253970456 HIV-1 Tat specific factor 1 [Homo sapiens] 42 0.002
gi|21361437 HIV-1 Tat specific factor 1 [Homo sapiens] 42 0.002
gi|213972636 tumor protein p53 binding protein 1 isoform 1 [Homo... 42 0.002
gi|213972634 tumor protein p53 binding protein 1 isoform 2 [Homo... 42 0.002
gi|5032189 tumor protein p53 binding protein 1 isoform 3 [Homo s... 42 0.002
gi|187936946 hypothetical protein LOC84140 [Homo sapiens] 42 0.003
gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo sa... 41 0.004
gi|55770895 ERBB2 interacting protein isoform 7 [Homo sapiens] 41 0.004
gi|8923909 ERBB2 interacting protein isoform 2 [Homo sapiens] 41 0.004
gi|110815815 centlein isoform 1 [Homo sapiens] 41 0.004
>gi|33356172 nibrin [Homo sapiens]
Length = 754
Score = 1506 bits (3899), Expect = 0.0
Identities = 754/754 (100%), Positives = 754/754 (100%)
Query: 1 MWKLLPAAGPAGGEPYRLLTGVEYVVGRKNCAILIENDQSISRNHAVLTANFSVTNLSQT 60
MWKLLPAAGPAGGEPYRLLTGVEYVVGRKNCAILIENDQSISRNHAVLTANFSVTNLSQT
Sbjct: 1 MWKLLPAAGPAGGEPYRLLTGVEYVVGRKNCAILIENDQSISRNHAVLTANFSVTNLSQT 60
Query: 61 DEIPVLTLKDNSKYGTFVNEEKMQNGFSRTLKSGDGITFGVFGSKFRIEYEPLVACSSCL 120
DEIPVLTLKDNSKYGTFVNEEKMQNGFSRTLKSGDGITFGVFGSKFRIEYEPLVACSSCL
Sbjct: 61 DEIPVLTLKDNSKYGTFVNEEKMQNGFSRTLKSGDGITFGVFGSKFRIEYEPLVACSSCL 120
Query: 121 DVSGKTALNQAILQLGGFTVNNWTEECTHLVMVSVKVTIKTICALICGRPIVKPEYFTEF 180
DVSGKTALNQAILQLGGFTVNNWTEECTHLVMVSVKVTIKTICALICGRPIVKPEYFTEF
Sbjct: 121 DVSGKTALNQAILQLGGFTVNNWTEECTHLVMVSVKVTIKTICALICGRPIVKPEYFTEF 180
Query: 181 LKAVESKKQPPQIESFYPPLDEPSIGSKNVDLSGRQERKQIFKGKTFIFLNAKQHKKLSS 240
LKAVESKKQPPQIESFYPPLDEPSIGSKNVDLSGRQERKQIFKGKTFIFLNAKQHKKLSS
Sbjct: 181 LKAVESKKQPPQIESFYPPLDEPSIGSKNVDLSGRQERKQIFKGKTFIFLNAKQHKKLSS 240
Query: 241 AVVFGGGEARLITEENEEEHNFFLAPGTCVVDTGITNSQTLIPDCQKKWIQSIMDMLQRQ 300
AVVFGGGEARLITEENEEEHNFFLAPGTCVVDTGITNSQTLIPDCQKKWIQSIMDMLQRQ
Sbjct: 241 AVVFGGGEARLITEENEEEHNFFLAPGTCVVDTGITNSQTLIPDCQKKWIQSIMDMLQRQ 300
Query: 301 GLRPIPEAEIGLAVIFMTTKNYCDPQGHPSTGLKTTTPGPSLSQGVSVDEKLMPSAPVNT 360
GLRPIPEAEIGLAVIFMTTKNYCDPQGHPSTGLKTTTPGPSLSQGVSVDEKLMPSAPVNT
Sbjct: 301 GLRPIPEAEIGLAVIFMTTKNYCDPQGHPSTGLKTTTPGPSLSQGVSVDEKLMPSAPVNT 360
Query: 361 TTYVADTESEQADTWDLSERPKEIKVSKMEQKFRMLSQDAPTVKESCKTSSNNNSMVSNT 420
TTYVADTESEQADTWDLSERPKEIKVSKMEQKFRMLSQDAPTVKESCKTSSNNNSMVSNT
Sbjct: 361 TTYVADTESEQADTWDLSERPKEIKVSKMEQKFRMLSQDAPTVKESCKTSSNNNSMVSNT 420
Query: 421 LAKMRIPNYQLSPTKLPSINKSKDRASQQQQTNSIRNYFQPSTKKRERDEENQEMSSCKS 480
LAKMRIPNYQLSPTKLPSINKSKDRASQQQQTNSIRNYFQPSTKKRERDEENQEMSSCKS
Sbjct: 421 LAKMRIPNYQLSPTKLPSINKSKDRASQQQQTNSIRNYFQPSTKKRERDEENQEMSSCKS 480
Query: 481 ARIETSCSLLEQTQPATPSLWKNKEQHLSENEPVDTNSDNNLFTDTDLKSIVKNSASKSH 540
ARIETSCSLLEQTQPATPSLWKNKEQHLSENEPVDTNSDNNLFTDTDLKSIVKNSASKSH
Sbjct: 481 ARIETSCSLLEQTQPATPSLWKNKEQHLSENEPVDTNSDNNLFTDTDLKSIVKNSASKSH 540
Query: 541 AAEKLRSNKKREMDDVAIEDEVLEQLFKDTKPELEIDVKVQKQEEDVNVRKRPRMDIETN 600
AAEKLRSNKKREMDDVAIEDEVLEQLFKDTKPELEIDVKVQKQEEDVNVRKRPRMDIETN
Sbjct: 541 AAEKLRSNKKREMDDVAIEDEVLEQLFKDTKPELEIDVKVQKQEEDVNVRKRPRMDIETN 600
Query: 601 DTFSDEAVPESSKISQENEIGKKRELKEDSLWSAKEISNNDKLQDDSEMLPKKLLLTEFR 660
DTFSDEAVPESSKISQENEIGKKRELKEDSLWSAKEISNNDKLQDDSEMLPKKLLLTEFR
Sbjct: 601 DTFSDEAVPESSKISQENEIGKKRELKEDSLWSAKEISNNDKLQDDSEMLPKKLLLTEFR 660
Query: 661 SLVIKNSTSRNPSGINDDYGQLKNFKKFKKVTYPGAGKLPHIIGGSDLIAHHARKNTELE 720
SLVIKNSTSRNPSGINDDYGQLKNFKKFKKVTYPGAGKLPHIIGGSDLIAHHARKNTELE
Sbjct: 661 SLVIKNSTSRNPSGINDDYGQLKNFKKFKKVTYPGAGKLPHIIGGSDLIAHHARKNTELE 720
Query: 721 EWLRQEMEVQNQHAKEESLADDLFRYNPYLKRRR 754
EWLRQEMEVQNQHAKEESLADDLFRYNPYLKRRR
Sbjct: 721 EWLRQEMEVQNQHAKEESLADDLFRYNPYLKRRR 754
>gi|109255230 centrosomal protein 170kDa isoform beta [Homo sapiens]
Length = 1486
Score = 53.1 bits (126), Expect = 9e-07
Identities = 162/776 (20%), Positives = 296/776 (38%), Gaps = 125/776 (16%)
Query: 11 AGGEPYRLLTGVEYVVGRKNCAILIENDQSISRNHAVLTANFSVTNLSQTDEIPVLTLKD 70
+GG +RL + +V GR +C +++++ +S+ + HAV+ + S TDE V L
Sbjct: 11 SGGTRHRLPREMIFV-GRDDCELMLQS-RSVDKQHAVINYDAS------TDEHLVKDL-- 60
Query: 71 NSKYGTFVNEEKMQNGFSRTLKSGDGITFGVFGSKFRIEYEPLVACSSCLDVSGKTALNQ 130
S GTFVN+ ++ TLK D + FG + F + V G+ + +
Sbjct: 61 GSLNGTFVNDVRIPEQTYITLKLEDKLRFGYDTNLFTV-------------VQGEMRVPE 107
Query: 131 AILQLGGFTVNNWTEECTHLVMVSVKVTIKTICALICGRPIVKPEYFTEFLKAVESKKQP 190
L+ FT+ + + +S + K+I + + TE LK+ E
Sbjct: 108 EALKHEKFTIQLQLSQKSSESELSKSASAKSIDSKVADAATEVQHKTTEALKSEEKAMDI 167
Query: 191 PQIESFYPPLDEPS-IGSKNVDLSGRQERKQIFKGKTFIFLNAKQHKKLSSAVVFGGG-E 248
+ P +PS G VD K+ FK N K +K A G G +
Sbjct: 168 SAMPRGTPLYGQPSWWGDDEVD------EKRAFK------TNGKPEEKNHEAGTSGCGID 215
Query: 249 ARLITEENEEEHNFFLAPGTCVVDTGITNSQTLIPDCQKKWIQSIMDMLQRQGLRP--IP 306
A+ + E+ + N + L P C++ S ++ ++ +P I
Sbjct: 216 AKQVEEQ-----------------SAAANEEVLFPFCRE---PSYFEIPTKEFQQPSQIT 255
Query: 307 EAEIGLAVIFMTTKNYCDPQGHPSTGLK--TTTPGP-SLSQGVS-----VDEKLMPSAP- 357
E+ I T ++ GH S ++ +TPG ++ V+ K S+P
Sbjct: 256 ESTIHEIPTKDTPSSHITGAGHASFTIEFDDSTPGKVTIRDHVTKFTSDQRHKSKKSSPG 315
Query: 358 ----VNTTTYVADTESEQADTWDLSERPKEIKVSKMEQKFRMLSQDAPTVKESCK----- 408
+ T + E++ AD W P ++ + E+ + + D P + K
Sbjct: 316 TQDLLGIQTGMMAPENKVAD-WLAQNNPPQMLWERTEEDSKSIKSDVPVYLKRLKGNKHD 374
Query: 409 ---TSSNNNSMVSNTLAKMRIPNYQLSPTKLPSINKSKDRASQQQQTNSI-------RNY 458
S + N+ +K L K +A+++ Q ++ ++Y
Sbjct: 375 DGTQSDSENAGAHRRCSKRATLEEHLRRHHSEHKKLQKVQATEKHQDQAVVFGVDDNQDY 434
Query: 459 FQPSTKKRERD--------------EENQEMSSCKSARIE--TSCSLLEQTQPATPSLWK 502
+P ++ +D EE + +++ E TS S ++ SL
Sbjct: 435 NRPVINEKHKDLIKDWALSSAAAVMEERKPLTTSGFHHSEEGTSSSGSKRWVSQWASLAA 494
Query: 503 NKEQHLSENEPVDTNSDNNLFTDTDLKS---IVKNSASKSHAAEKLRSNKKREMDDVAIE 559
N +H E ++ ++ L +T++ V+++ S + A + ++R + + E
Sbjct: 495 NHTRHDQEERIMEFSAPLPLENETEISESGMTVRSTGSATSLASQ-GERRRRTLPQLPNE 553
Query: 560 DEVLE-QLFKDTKPELEI----DVKVQKQEEDVNVRKRPRMDIETNDTFSDEAV-PESSK 613
++ LE K EI D ++Q++E V ++ + D + + + AV E+ K
Sbjct: 554 EKSLESHRAKVVTQRSEIGEKQDTELQEKETPTQVYQKDKQDADRPLSKMNRAVNGETLK 613
Query: 614 ISQENEIGKKRELKEDSLWSAKEISNNDKLQDDSEMLPKKLLLTEFRSLVIKNST---SR 670
+N K L S KE S DK + KL E R T S+
Sbjct: 614 TGGDN----KTLLHLGSSAPGKEKSETDKETSLVKQTLAKLQQQEQREEAQWTPTKLSSK 669
Query: 671 NPSGINDDYGQLKNFKKFKKVTYPGAGKLPHIIGGSDLIAHHARKNTELEEWLRQE 726
N SG D + + FK+ + P H D +A K + EE L+ +
Sbjct: 670 NVSGQTDKCRE----ETFKQESQPPEKNSGHSTSKGDRVAQSESKRRKAEEILKSQ 721
>gi|109255232 centrosomal protein 170kDa isoform gamma [Homo
sapiens]
Length = 1460
Score = 53.1 bits (126), Expect = 9e-07
Identities = 162/776 (20%), Positives = 296/776 (38%), Gaps = 125/776 (16%)
Query: 11 AGGEPYRLLTGVEYVVGRKNCAILIENDQSISRNHAVLTANFSVTNLSQTDEIPVLTLKD 70
+GG +RL + +V GR +C +++++ +S+ + HAV+ + S TDE V L
Sbjct: 11 SGGTRHRLPREMIFV-GRDDCELMLQS-RSVDKQHAVINYDAS------TDEHLVKDL-- 60
Query: 71 NSKYGTFVNEEKMQNGFSRTLKSGDGITFGVFGSKFRIEYEPLVACSSCLDVSGKTALNQ 130
S GTFVN+ ++ TLK D + FG + F + V G+ + +
Sbjct: 61 GSLNGTFVNDVRIPEQTYITLKLEDKLRFGYDTNLFTV-------------VQGEMRVPE 107
Query: 131 AILQLGGFTVNNWTEECTHLVMVSVKVTIKTICALICGRPIVKPEYFTEFLKAVESKKQP 190
L+ FT+ + + +S + K+I + + TE LK+ E
Sbjct: 108 EALKHEKFTIQLQLSQKSSESELSKSASAKSIDSKVADAATEVQHKTTEALKSEEKAMDI 167
Query: 191 PQIESFYPPLDEPS-IGSKNVDLSGRQERKQIFKGKTFIFLNAKQHKKLSSAVVFGGG-E 248
+ P +PS G VD K+ FK N K +K A G G +
Sbjct: 168 SAMPRGTPLYGQPSWWGDDEVD------EKRAFK------TNGKPEEKNHEAGTSGCGID 215
Query: 249 ARLITEENEEEHNFFLAPGTCVVDTGITNSQTLIPDCQKKWIQSIMDMLQRQGLRP--IP 306
A+ + E+ + N + L P C++ S ++ ++ +P I
Sbjct: 216 AKQVEEQ-----------------SAAANEEVLFPFCRE---PSYFEIPTKEFQQPSQIT 255
Query: 307 EAEIGLAVIFMTTKNYCDPQGHPSTGLK--TTTPGP-SLSQGVS-----VDEKLMPSAP- 357
E+ I T ++ GH S ++ +TPG ++ V+ K S+P
Sbjct: 256 ESTIHEIPTKDTPSSHITGAGHASFTIEFDDSTPGKVTIRDHVTKFTSDQRHKSKKSSPG 315
Query: 358 ----VNTTTYVADTESEQADTWDLSERPKEIKVSKMEQKFRMLSQDAPTVKESCK----- 408
+ T + E++ AD W P ++ + E+ + + D P + K
Sbjct: 316 TQDLLGIQTGMMAPENKVAD-WLAQNNPPQMLWERTEEDSKSIKSDVPVYLKRLKGNKHD 374
Query: 409 ---TSSNNNSMVSNTLAKMRIPNYQLSPTKLPSINKSKDRASQQQQTNSI-------RNY 458
S + N+ +K L K +A+++ Q ++ ++Y
Sbjct: 375 DGTQSDSENAGAHRRCSKRATLEEHLRRHHSEHKKLQKVQATEKHQDQAVVFGVDDNQDY 434
Query: 459 FQPSTKKRERD--------------EENQEMSSCKSARIE--TSCSLLEQTQPATPSLWK 502
+P ++ +D EE + +++ E TS S ++ SL
Sbjct: 435 NRPVINEKHKDLIKDWALSSAAAVMEERKPLTTSGFHHSEEGTSSSGSKRWVSQWASLAA 494
Query: 503 NKEQHLSENEPVDTNSDNNLFTDTDLKS---IVKNSASKSHAAEKLRSNKKREMDDVAIE 559
N +H E ++ ++ L +T++ V+++ S + A + ++R + + E
Sbjct: 495 NHTRHDQEERIMEFSAPLPLENETEISESGMTVRSTGSATSLASQ-GERRRRTLPQLPNE 553
Query: 560 DEVLE-QLFKDTKPELEI----DVKVQKQEEDVNVRKRPRMDIETNDTFSDEAV-PESSK 613
++ LE K EI D ++Q++E V ++ + D + + + AV E+ K
Sbjct: 554 EKSLESHRAKVVTQRSEIGEKQDTELQEKETPTQVYQKDKQDADRPLSKMNRAVNGETLK 613
Query: 614 ISQENEIGKKRELKEDSLWSAKEISNNDKLQDDSEMLPKKLLLTEFRSLVIKNST---SR 670
+N K L S KE S DK + KL E R T S+
Sbjct: 614 TGGDN----KTLLHLGSSAPGKEKSETDKETSLVKQTLAKLQQQEQREEAQWTPTKLSSK 669
Query: 671 NPSGINDDYGQLKNFKKFKKVTYPGAGKLPHIIGGSDLIAHHARKNTELEEWLRQE 726
N SG D + + FK+ + P H D +A K + EE L+ +
Sbjct: 670 NVSGQTDKCRE----ETFKQESQPPEKNSGHSTSKGDRVAQSESKRRKAEEILKSQ 721
>gi|208022632 coiled-coil domain containing 88A isoform 1 [Homo
sapiens]
Length = 1870
Score = 48.9 bits (115), Expect = 2e-05
Identities = 69/340 (20%), Positives = 147/340 (43%), Gaps = 57/340 (16%)
Query: 344 QGVSVDEKLMPSAPVNTTTYVADTESEQAD----TWDLSERPKEIKVS-----KMEQKFR 394
QG+ ++ + + N+ + ESE D L + +E+K+S ++E++ +
Sbjct: 759 QGLDIENQRLQKTLENSNKKIQQLESELQDLEMENQTLQKNLEELKISSKRLEQLEKENK 818
Query: 395 MLSQDAPTVKESCKTSSNNNSMVSNTLAKMRIPNYQLSPTKLPSINKSKDRASQQQQTNS 454
L Q+ +++ K N + A+++ + + K+ ++ K S++
Sbjct: 819 SLEQETSQLEKDKKQLEKENKRLRQQ-AEIKDTTLEENNVKIGNLEKENKTLSKE----- 872
Query: 455 IRNYFQPSTKKRERDEENQEMSSCKSARIETSCSLLEQTQPATPSLWKNKEQHLSENEPV 514
I Y + + +E ++EN+E+ + I+T +L E +E +
Sbjct: 873 IGIYKESCVRLKELEKENKELVKRATIDIKTLVTLREDLV----------------SEKL 916
Query: 515 DTNSDNNLFTDTDLKSIVKNSASKSHAAEKLRSNKKREMDDVAIEDE---VLEQLFKDT- 570
T NN DL+ + +H EK+ NK+R + D D+ +LE + T
Sbjct: 917 KTQQMNN-----DLEKL-------THELEKIGLNKERLLHDEQSTDDRYKLLESKLESTL 964
Query: 571 KPELEIDVKVQKQEEDVNVRKRPRMDIETNDTFSDEAVPESSKISQENEIGKKRELKEDS 630
K LEI K+E+ + R +E + ++ + E + + E K+R+ +E
Sbjct: 965 KKSLEI-----KEEKIAALEAR----LEESTNYNQQLRQELKTVKKNYEALKQRQDEERM 1015
Query: 631 LWSAKEISNND-KLQDDSEMLPKKLLLTEFRSLVIKNSTS 669
+ S+ IS D K + +S+ ++LL + R + ++ + +
Sbjct: 1016 VQSSPPISGEDNKWERESQETTRELLKVKDRLIEVERNNA 1055
Score = 40.4 bits (93), Expect = 0.006
Identities = 39/171 (22%), Positives = 74/171 (43%), Gaps = 18/171 (10%)
Query: 529 KSIVKNSASKSHAAEKLRSNKKREMDDVAIEDEVLEQLFKDTKPELEIDVKVQKQEEDVN 588
K ++K A E LR N +R++ + E+E L Q + +I + + +
Sbjct: 529 KDLMKEKAQLEKTIETLRENSERQIKILEQENEHLNQTVSSLRQRSQISAEARVK----- 583
Query: 589 VRKRPRMDIETNDTFSDEAVPE-SSKIS----QENEIGKKRELKEDSLWSAKEISNN-DK 642
DIE + E++ E SSK+S ++ +I K+ E ++ A+E+ N
Sbjct: 584 -------DIEKENKILHESIKETSSKLSKIEFEKRQIKKELEHYKEKGERAEELENELHH 636
Query: 643 LQDDSEMLPKKLLLTEFRSLVIKNSTSRNPSGINDDYGQLKNFKKFKKVTY 693
L+ ++E+L KK+ + I+ N ++ K FK +T+
Sbjct: 637 LEKENELLQKKITNLKITCEKIEALEQENSELERENRKLKKTLDSFKNLTF 687
>gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo
sapiens]
Length = 1939
Score = 48.1 bits (113), Expect = 3e-05
Identities = 68/301 (22%), Positives = 124/301 (41%), Gaps = 50/301 (16%)
Query: 365 ADTESEQADTWDLSERPKEIKVSKMEQKFRMLSQDAPTVKESCKTSSNNNSMVSNTLAKM 424
A+TE E A+ + E+ KE +++K E K + L + T+ + +++LA
Sbjct: 847 AETEKEMANMKEEFEKTKE-ELAKTEAKRKELEEKMVTLMQEKNDLQLQVQAEADSLADA 905
Query: 425 RIPNYQLSPTKLPSINKSKDRASQQQQTNSIRNYFQPSTKKRERDEENQEMSSCKSARIE 484
QL TK+ K K+ T++ E +EE + K ++E
Sbjct: 906 EERCDQLIKTKIQLEAKIKE-----------------VTERAEDEEEINAELTAKKRKLE 948
Query: 485 TSCS-LLEQTQPATPSLWK-NKEQHLSENEPVDTNSDNNLFTDTDLKSIVKNSASKSHAA 542
CS L + +L K KE+H +EN+ +K++ + A
Sbjct: 949 DECSELKKDIDDLELTLAKVEKEKHATENK---------------VKNLTEEMAGLDETI 993
Query: 543 EKLRSNKK-------REMDDVAIEDEVLEQLFKDTKPELEIDVKVQKQEEDVNVRKRPRM 595
KL KK + +DD+ E++ + L TK +++++ +V E + K+ RM
Sbjct: 994 AKLTKEKKALQEAHQQTLDDLQAEEDKVNTL---TKAKIKLEQQVDDLEGSLEQEKKIRM 1050
Query: 596 DIE--TNDTFSDEAVPESSKISQENEIGKKRELKEDSLWSAKEISNNDKLQDDSEMLPKK 653
D+E D + + S + EN+ K++L E E+S +D + L +
Sbjct: 1051 DLERAKRKLEGDLKLAQESTMDIEND---KQQLDEKLKKKEFEMSGLQSKIEDEQALGMQ 1107
Query: 654 L 654
L
Sbjct: 1108 L 1108
Score = 35.4 bits (80), Expect = 0.20
Identities = 66/321 (20%), Positives = 120/321 (37%), Gaps = 42/321 (13%)
Query: 347 SVDEKLMPSAPVNTTTYVADTESEQADTWDLS-ERPKEIKVSKMEQKFRMLSQDAPTVKE 405
++D+ VNT T +Q D + S E+ K+I++ +E+ R L D +E
Sbjct: 1010 TLDDLQAEEDKVNTLTKAKIKLEQQVDDLEGSLEQEKKIRMD-LERAKRKLEGDLKLAQE 1068
Query: 406 SCKTSSNNNSMVSNTLAK---------MRIPNYQLSPTKL-PSINKSKDRASQQQQTNSI 455
S N+ + L K +I + Q +L I + + R + ++
Sbjct: 1069 STMDIENDKQQLDEKLKKKEFEMSGLQSKIEDEQALGMQLQKKIKELQARIEELEEEIEA 1128
Query: 456 RNYFQPSTKKRERD---------EENQEMSSCKSARIETSCSLLEQTQPATPSLWKNKEQ 506
+ +K+ D E +E SA+IE + + Q L +E
Sbjct: 1129 ERASRAKAEKQRSDLSRELEEISERLEEAGGATSAQIEMNKKREAEFQKMRRDL---EEA 1185
Query: 507 HLSENEPVDTNSDNNLFTDTDLKSIVKNSASKSHAAEKLRSNKKREMDDVAIEDEV---- 562
L T + + +L + N EK +S K E+DD+A E
Sbjct: 1186 TLQHEATAATLRKKHADSVAELGEQIDNLQRVKQKLEKEKSEMKMEIDDLASNMETVSKA 1245
Query: 563 ---LEQLFKDTKPEL-EIDVKVQKQEEDVNVRKRPRMDIETNDTFSDEAVPESSKISQEN 618
LE++ + + +L EI K ++Q+ +N R ++T + E + +
Sbjct: 1246 KGNLEKMCRALEDQLSEIKTKEEEQQRLINDLTAQRARLQTESGEYSRQLDEKDTLVSQL 1305
Query: 619 EIGK----------KRELKED 629
GK KR+L+E+
Sbjct: 1306 SRGKQAFTQQIEELKRQLEEE 1326
Score = 31.6 bits (70), Expect = 2.8
Identities = 36/185 (19%), Positives = 76/185 (41%), Gaps = 23/185 (12%)
Query: 435 KLPSINKSKDRASQQQQTNSI----RNYFQPSTKKRERDEEN---QEMSSCKSARIETSC 487
K S+ K+K R + + I N + K++R+ + + C+ E
Sbjct: 1414 KCASLEKTKQRLQNEVEDLMIDVERTNAACAALDKKQRNFDKILAEWKQKCEETHAELEA 1473
Query: 488 SLLEQTQPATPSLWKNK---EQHLSENEPVDTNSDNNLFTDTDLKSIVKNSASKSHAAEK 544
S E +T L+K K E+ L + E + + N +DL + + H EK
Sbjct: 1474 SQKESRSLST-ELFKIKNAYEESLDQLETLKRENKNLQQEISDLTEQIAEGGKRIHELEK 1532
Query: 545 LRSNKKREMDDVAI------------EDEVLEQLFKDTKPELEIDVKVQKQEEDVNVRKR 592
++ ++E ++ E ++L + + + E+D K+ +++E+++ KR
Sbjct: 1533 IKKQVEQEKSELQAALEEAEASLEHEEGKILRIQLELNQVKSEVDRKIAEKDEEIDQMKR 1592
Query: 593 PRMDI 597
+ I
Sbjct: 1593 NHIRI 1597
>gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo
sapiens]
Length = 1941
Score = 47.8 bits (112), Expect = 4e-05
Identities = 66/294 (22%), Positives = 124/294 (42%), Gaps = 41/294 (13%)
Query: 377 LSERPKEIKVSKMEQKFRMLSQDAPTVKESCKTSSNNNSMVSNTLAKMRIPNYQLSPTKL 436
L E +++ M+++F+ + + K K MV TL K + +
Sbjct: 846 LKSAETEKEMATMKEEFQKIKDEL--AKSEAKRKELEEKMV--TLLKEKNDLQLQVQAEA 901
Query: 437 PSINKSKDRASQQQQTN-SIRNYFQPSTKKRERDEENQEMSSCKSARIETSCS-LLEQTQ 494
+ +++R Q +T + + T++ E +EE + K ++E CS L +
Sbjct: 902 EGLADAEERCDQLIKTKIQLEAKIKEVTERAEDEEEINAELTAKKRKLEDECSELKKDID 961
Query: 495 PATPSLWK-NKEQHLSENEPVDTNSDNNLFTDTDLKSIVKNSASKSHAAEKLRSNKK--- 550
+L K KE+H +EN+ +K++ + A KL KK
Sbjct: 962 DLELTLAKVEKEKHATENK---------------VKNLTEEMAGLDETIAKLTKEKKALQ 1006
Query: 551 ----REMDDVAIEDEVLEQLFKDTKPELEIDVKVQKQEEDVNVRKRPRMDIE--TNDTFS 604
+ +DD+ E++ + L TK +++++ +V E + K+ RMD+E
Sbjct: 1007 EAHQQTLDDLQAEEDKVNTL---TKAKIKLEQQVDDLEGSLEQEKKLRMDLERAKRKLEG 1063
Query: 605 DEAVPESSKISQENEIGKKRELKEDSLWSAKEISN-NDKLQDDSEM---LPKKL 654
D + + S + ENE K++L E EISN K++D+ + L KK+
Sbjct: 1064 DLKLAQESIMDIENE---KQQLDEKLKKKEFEISNLQSKIEDEQALGIQLQKKI 1114
Score = 33.9 bits (76), Expect = 0.57
Identities = 63/300 (21%), Positives = 115/300 (38%), Gaps = 35/300 (11%)
Query: 347 SVDEKLMPSAPVNTTTYVADTESEQADTWDLS-ERPKEIKVSKMEQKFRMLSQDAPTVKE 405
++D+ VNT T +Q D + S E+ K++++ +E+ R L D +E
Sbjct: 1012 TLDDLQAEEDKVNTLTKAKIKLEQQVDDLEGSLEQEKKLRMD-LERAKRKLEGDLKLAQE 1070
Query: 406 SCKTSSNNNSMVSNTLAK--MRIPNYQ--------LSPTKLPSINKSKDRASQQQQTNSI 455
S N + L K I N Q L I + + R + ++
Sbjct: 1071 SIMDIENEKQQLDEKLKKKEFEISNLQSKIEDEQALGIQLQKKIKELQARIEELEEEIEA 1130
Query: 456 RNYFQPSTKKRERD---------EENQEMSSCKSARIETSCSLLEQTQPATPSLWKNKEQ 506
+ +K+ D E +E SA+IE + + Q L +E
Sbjct: 1131 ERASRAKAEKQRSDLSRELEEISERLEEAGGATSAQIEMNKKREAEFQKMRRDL---EEA 1187
Query: 507 HLSENEPVDTNSDNNLFTDTDLKSIVKNSASKSHAAEKLRSNKKREMDDVAIEDEV---- 562
L T + + +L + N EK +S K E+DD+A E
Sbjct: 1188 TLQHEATAATLRKKHADSVAELGEQIDNLQRVKQKLEKEKSEMKMEIDDLASNVETVSKA 1247
Query: 563 ---LEQLFKDTKPEL-EIDVKVQKQEEDVN--VRKRPRMDIETNDTFSDEAVPESSKISQ 616
LE++ + + +L E+ K ++Q+ +N +R R+ E+ + FS + + + +SQ
Sbjct: 1248 KGNLEKMCRTLEDQLSELKSKEEEQQRLINDLTAQRGRLQTESGE-FSRQLDEKEALVSQ 1306
>gi|153792663 myosin, heavy chain 2, skeletal muscle, adult [Homo
sapiens]
Length = 1941
Score = 47.8 bits (112), Expect = 4e-05
Identities = 66/294 (22%), Positives = 124/294 (42%), Gaps = 41/294 (13%)
Query: 377 LSERPKEIKVSKMEQKFRMLSQDAPTVKESCKTSSNNNSMVSNTLAKMRIPNYQLSPTKL 436
L E +++ M+++F+ + + K K MV TL K + +
Sbjct: 846 LKSAETEKEMATMKEEFQKIKDEL--AKSEAKRKELEEKMV--TLLKEKNDLQLQVQAEA 901
Query: 437 PSINKSKDRASQQQQTN-SIRNYFQPSTKKRERDEENQEMSSCKSARIETSCS-LLEQTQ 494
+ +++R Q +T + + T++ E +EE + K ++E CS L +
Sbjct: 902 EGLADAEERCDQLIKTKIQLEAKIKEVTERAEDEEEINAELTAKKRKLEDECSELKKDID 961
Query: 495 PATPSLWK-NKEQHLSENEPVDTNSDNNLFTDTDLKSIVKNSASKSHAAEKLRSNKK--- 550
+L K KE+H +EN+ +K++ + A KL KK
Sbjct: 962 DLELTLAKVEKEKHATENK---------------VKNLTEEMAGLDETIAKLTKEKKALQ 1006
Query: 551 ----REMDDVAIEDEVLEQLFKDTKPELEIDVKVQKQEEDVNVRKRPRMDIE--TNDTFS 604
+ +DD+ E++ + L TK +++++ +V E + K+ RMD+E
Sbjct: 1007 EAHQQTLDDLQAEEDKVNTL---TKAKIKLEQQVDDLEGSLEQEKKLRMDLERAKRKLEG 1063
Query: 605 DEAVPESSKISQENEIGKKRELKEDSLWSAKEISN-NDKLQDDSEM---LPKKL 654
D + + S + ENE K++L E EISN K++D+ + L KK+
Sbjct: 1064 DLKLAQESIMDIENE---KQQLDEKLKKKEFEISNLQSKIEDEQALGIQLQKKI 1114
Score = 33.9 bits (76), Expect = 0.57
Identities = 63/300 (21%), Positives = 115/300 (38%), Gaps = 35/300 (11%)
Query: 347 SVDEKLMPSAPVNTTTYVADTESEQADTWDLS-ERPKEIKVSKMEQKFRMLSQDAPTVKE 405
++D+ VNT T +Q D + S E+ K++++ +E+ R L D +E
Sbjct: 1012 TLDDLQAEEDKVNTLTKAKIKLEQQVDDLEGSLEQEKKLRMD-LERAKRKLEGDLKLAQE 1070
Query: 406 SCKTSSNNNSMVSNTLAK--MRIPNYQ--------LSPTKLPSINKSKDRASQQQQTNSI 455
S N + L K I N Q L I + + R + ++
Sbjct: 1071 SIMDIENEKQQLDEKLKKKEFEISNLQSKIEDEQALGIQLQKKIKELQARIEELEEEIEA 1130
Query: 456 RNYFQPSTKKRERD---------EENQEMSSCKSARIETSCSLLEQTQPATPSLWKNKEQ 506
+ +K+ D E +E SA+IE + + Q L +E
Sbjct: 1131 ERASRAKAEKQRSDLSRELEEISERLEEAGGATSAQIEMNKKREAEFQKMRRDL---EEA 1187
Query: 507 HLSENEPVDTNSDNNLFTDTDLKSIVKNSASKSHAAEKLRSNKKREMDDVAIEDEV---- 562
L T + + +L + N EK +S K E+DD+A E
Sbjct: 1188 TLQHEATAATLRKKHADSVAELGEQIDNLQRVKQKLEKEKSEMKMEIDDLASNVETVSKA 1247
Query: 563 ---LEQLFKDTKPEL-EIDVKVQKQEEDVN--VRKRPRMDIETNDTFSDEAVPESSKISQ 616
LE++ + + +L E+ K ++Q+ +N +R R+ E+ + FS + + + +SQ
Sbjct: 1248 KGNLEKMCRTLEDQLSELKSKEEEQQRLINDLTAQRGRLQTESGE-FSRQLDEKEALVSQ 1306
>gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [Homo
sapiens]
Length = 1937
Score = 47.4 bits (111), Expect = 5e-05
Identities = 70/294 (23%), Positives = 127/294 (43%), Gaps = 43/294 (14%)
Query: 388 KMEQKFRMLSQDAPTVKESCKTSSNNNSMVSNTLAKMRIPNYQLSPTKLPSINKSKDRAS 447
K+ K + L + A T KE T + LAK +L K+ ++ K K+
Sbjct: 834 KLFFKIKPLLKSAETEKEMA-TMKEEFQKTKDELAKSEAKRKELEE-KMVTLLKEKNDLQ 891
Query: 448 QQQQTNS-------------IRNYFQPSTKKRE---RDEENQEMSS---CKSARIETSCS 488
Q Q+ + I+N Q K +E R EE +E+++ K ++E CS
Sbjct: 892 LQVQSEADSLADAEERCEQLIKNKIQLEAKIKEVTERAEEEEEINAELTAKKRKLEDECS 951
Query: 489 -LLEQTQPATPSLWK-NKEQHLSENEPVDTNSDNNLFTDTDLKSIVKNSASKSHAAEKLR 546
L + +L K KE+H +EN+ + ++ + + A S + L+
Sbjct: 952 ELKKDIDDLELTLAKVEKEKHATENKVKNLTE--------EMAGLDETIAKLSKEKKALQ 1003
Query: 547 SNKKREMDDVAIEDEVLEQLFKDTKPELEIDVKVQKQEEDVNVRKRPRMDIE--TNDTFS 604
++ +DD+ E++ + L TK + +++ +V E + K+ RMD+E
Sbjct: 1004 ETHQQTLDDLQAEEDKVNIL---TKAKTKLEQQVDDLEGSLEQEKKLRMDLERAKRKLEG 1060
Query: 605 DEAVPESSKISQENEIGKKRELKEDSLWSAKEISN-NDKLQDDSEM---LPKKL 654
D + + S + EN+ K++L E EISN K++D+ + L KK+
Sbjct: 1061 DLKLAQESTMDMEND---KQQLDEKLEKKEFEISNLISKIEDEQAVEIQLQKKI 1111
>gi|110611903 myosin, heavy polypeptide 4, skeletal muscle [Homo
sapiens]
Length = 1939
Score = 47.4 bits (111), Expect = 5e-05
Identities = 70/305 (22%), Positives = 127/305 (41%), Gaps = 54/305 (17%)
Query: 365 ADTESEQADTWDLSERPKEIKVSKMEQKFRMLSQDAPTVKESCKTSSNNNSMVSNTLAKM 424
A+TE E A+ + E+ KE +++K E K + L + T+ + ++ LA
Sbjct: 847 AETEKEMANMKEEFEKTKE-ELAKTEAKRKELEEKMVTLMQEKNDLQLQVQAEADALADA 905
Query: 425 RIPNYQLSPTKLPSINKSKDRASQQQQTNSIRNYFQPSTKKRERDEENQEMSSCKSARIE 484
QL TK+ K K+ T++ E +EE + K ++E
Sbjct: 906 EERCDQLIKTKIQLEAKIKE-----------------VTERAEDEEEINAELTAKKRKLE 948
Query: 485 TSCS-LLEQTQPATPSLWK-NKEQHLSENEPVDTNSDNNLFTDTDLKSIVKNSASKSHAA 542
CS L + +L K KE+H +EN+ +K++ + A
Sbjct: 949 DECSELKKDIDDLELTLAKVEKEKHATENK---------------VKNLTEEMAGLDETI 993
Query: 543 EKLRSNKK-------REMDDVAIEDEVLEQLFKDTKPELEIDVKVQKQEEDVNVRKRPRM 595
KL KK + +DD+ +E++ + L TK + +++ +V E + K+ M
Sbjct: 994 AKLTKEKKALQEAHQQTLDDLQMEEDKVNTL---TKAKTKLEQQVDDLEGSLEQEKKLCM 1050
Query: 596 DIE--TNDTFSDEAVPESSKISQENEIGKKRELKEDSLWSAKEISN-NDKLQDDSEM--- 649
D+E D + + S + EN+ K++L E E+SN K++D+ +
Sbjct: 1051 DLERAKRKLEGDLKLAQESTMDTEND---KQQLNEKLKKKEFEMSNLQGKIEDEQALAIQ 1107
Query: 650 LPKKL 654
L KK+
Sbjct: 1108 LQKKI 1112
Score = 33.1 bits (74), Expect = 0.98
Identities = 59/321 (18%), Positives = 121/321 (37%), Gaps = 40/321 (12%)
Query: 347 SVDEKLMPSAPVNTTTYVADTESEQADTWDLSERPKEIKVSKMEQKFRMLSQDAPTVKES 406
++D+ M VNT T +Q D + S ++ +E+ R L D +ES
Sbjct: 1010 TLDDLQMEEDKVNTLTKAKTKLEQQVDDLEGSLEQEKKLCMDLERAKRKLEGDLKLAQES 1069
Query: 407 CKTSSNNNSMVSNTLAKM---------RIPNYQLSPTKL-PSINKSKDRASQQQQTNSIR 456
+ N+ ++ L K +I + Q +L I + + R + ++
Sbjct: 1070 TMDTENDKQQLNEKLKKKEFEMSNLQGKIEDEQALAIQLQKKIKELQARIEELEEEIEAE 1129
Query: 457 NYFQPSTKKRERD---------EENQEMSSCKSARIETSCSLLEQTQPATPSLWKNKEQH 507
+ +K+ D E +E SA+IE + + Q L ++ QH
Sbjct: 1130 RASRAKAEKQRSDLSRELEEISERLEEAGGATSAQIEMNKKREAEFQKMRRDLEESTLQH 1189
Query: 508 LSENEPVDTNSDNNLFTDTDLKSIVKNSASKSHAAEKLRSNKKREMDDVAIEDEVL---- 563
+ + +++ +L + + EK +S K E++D+A E +
Sbjct: 1190 EATAAALRKKHADSV---AELGEQIDSLQRVKQKLEKEKSELKMEINDLASNMETVSKAK 1246
Query: 564 ---EQLFKDTKPEL-EIDVKVQKQEEDVNVRKRPRMDIETNDTFSDEAVPESSKISQENE 619
E++ + + +L EI K ++Q+ +N + + T + E + +
Sbjct: 1247 ANFEKMCRTLEDQLSEIKTKEEEQQRLINELSAQKARLHTESGEFSRQLDEKDAMVSQLS 1306
Query: 620 IGK----------KRELKEDS 630
GK KR+L+E++
Sbjct: 1307 RGKQAFTQQIEELKRQLEEET 1327
>gi|134948605 ankyrin repeat domain 12 isoform 2 [Homo sapiens]
Length = 2039
Score = 45.8 bits (107), Expect = 1e-04
Identities = 59/260 (22%), Positives = 110/260 (42%), Gaps = 31/260 (11%)
Query: 440 NKSKDRASQQQQTNSIRNYFQPSTKKRERDEENQEMSSCKSARIETSCSLLEQTQPATPS 499
NK KDR +++ + + + K ++E+ + A+ E SL E+T+
Sbjct: 928 NKEKDRELDKKEKSRDKESINITNSKHIQEEKKSSIVDGNKAQHEKPLSLKEKTKDEPLK 987
Query: 500 LWKNKEQHLSENEPVDTNSDNNLFTD-------TDLKSIVKNSASKSHAAEK-LRSNKKR 551
KE+ +++ +D + + D LKS KS A K R +KR
Sbjct: 988 TPDGKEKD-KKDKDIDRYKERDKHKDKIQINSLLKLKSEADKPKPKSSPASKDTRPKEKR 1046
Query: 552 EMDD----------VAIEDEVLEQLFKDTKPELEIDVKVQKQEEDVNVRKRPRMDIETND 601
++D ++++D +EQ K K ++ KQ+E +R R ++++ D
Sbjct: 1047 LVNDDLMQTSFERMLSLKDLEIEQWHKKHKEKI-------KQKEKERLRNRNCLELKIKD 1099
Query: 602 TFSDEAVPESSKISQENEIGKKRELKEDSLWSAKEISNNDKLQDDSEMLPKKLLLTEFR- 660
+ P SK ++E K E+ + KE D + + S+ + K ++T +
Sbjct: 1100 KEKTKHTPTESK-NKELTRSKSSEVTDA---YTKEKQPKDAVSNRSQSVDTKNVMTLGKS 1155
Query: 661 SLVIKNSTSRNPSGINDDYG 680
S V NS +R+P N+ G
Sbjct: 1156 SFVSDNSLNRSPRSENEKPG 1175
>gi|134948558 ankyrin repeat domain 12 isoform 1 [Homo sapiens]
Length = 2062
Score = 45.8 bits (107), Expect = 1e-04
Identities = 59/260 (22%), Positives = 110/260 (42%), Gaps = 31/260 (11%)
Query: 440 NKSKDRASQQQQTNSIRNYFQPSTKKRERDEENQEMSSCKSARIETSCSLLEQTQPATPS 499
NK KDR +++ + + + K ++E+ + A+ E SL E+T+
Sbjct: 951 NKEKDRELDKKEKSRDKESINITNSKHIQEEKKSSIVDGNKAQHEKPLSLKEKTKDEPLK 1010
Query: 500 LWKNKEQHLSENEPVDTNSDNNLFTD-------TDLKSIVKNSASKSHAAEK-LRSNKKR 551
KE+ +++ +D + + D LKS KS A K R +KR
Sbjct: 1011 TPDGKEKD-KKDKDIDRYKERDKHKDKIQINSLLKLKSEADKPKPKSSPASKDTRPKEKR 1069
Query: 552 EMDD----------VAIEDEVLEQLFKDTKPELEIDVKVQKQEEDVNVRKRPRMDIETND 601
++D ++++D +EQ K K ++ KQ+E +R R ++++ D
Sbjct: 1070 LVNDDLMQTSFERMLSLKDLEIEQWHKKHKEKI-------KQKEKERLRNRNCLELKIKD 1122
Query: 602 TFSDEAVPESSKISQENEIGKKRELKEDSLWSAKEISNNDKLQDDSEMLPKKLLLTEFR- 660
+ P SK ++E K E+ + KE D + + S+ + K ++T +
Sbjct: 1123 KEKTKHTPTESK-NKELTRSKSSEVTDA---YTKEKQPKDAVSNRSQSVDTKNVMTLGKS 1178
Query: 661 SLVIKNSTSRNPSGINDDYG 680
S V NS +R+P N+ G
Sbjct: 1179 SFVSDNSLNRSPRSENEKPG 1198
>gi|217330641 IWS1 homolog [Homo sapiens]
Length = 819
Score = 45.1 bits (105), Expect = 2e-04
Identities = 64/296 (21%), Positives = 124/296 (41%), Gaps = 24/296 (8%)
Query: 364 VADTESEQADTWDLS----ERPKEIKVSKMEQKFRMLSQDAPTVKESCKTSSNNNSMVSN 419
++D+ESE+ S E P + ++S E + P V +S + +
Sbjct: 182 ISDSESEEPPRHQASDSENEEPPKPRMSDSESE----ELPKPQVSDSESEEPPRHQASDS 237
Query: 420 TLAKMRIPNYQLSPTKLPSINKSKDRASQQQQTNSIRNY-FQPSTKKRERDEENQEMSSC 478
++ P S ++ P +++ D +++ I + + + + D EN+E+
Sbjct: 238 ENEELPKPRISDSESEDPPRHQASDSENEELPKPRISDSESEDPPRNQASDSENEELPK- 296
Query: 479 KSARIETSCSLLEQTQPATPSLWKNKEQHLSENEPVDTNSDNNLFTDTDLKSIVKNSAS- 537
R+ S S Q PA+ S ++ +H + E D + N DT++++ +S S
Sbjct: 297 --PRVSDSESEGPQKGPASDSETEDASRHKQKPESDDDSDRENKGEDTEMQNDSFHSDSH 354
Query: 538 ----KSHAAE-KLRSNKKREMDDVAIEDEVLEQLFKDTKPELEIDVKVQKQEEDVNVRKR 592
K H+++ + +KK++MD E E E+ K + D ++E+ K+
Sbjct: 355 MDRKKFHSSDSEEEEHKKQKMDSDEDEKEGEEEKVAKRKAAVLSD----SEDEEKASAKK 410
Query: 593 PRMDIETNDTFSDEAVPESSKISQENEIGKKRELKEDSLWSAKEISNNDKLQDDSE 648
R+ + +D+ SD +S K +E I E + S K+ D DSE
Sbjct: 411 SRVVSDADDSDSDAVSDKSGK--REKTIASDSEEEAGKELSDKKNEEKDLFGSDSE 464
Score = 37.4 bits (85), Expect = 0.052
Identities = 59/306 (19%), Positives = 113/306 (36%), Gaps = 24/306 (7%)
Query: 363 YVADTESEQADTWDLSERPKEIKVSKMEQKFRMLSQDAPTVKESCKTSSNNNSMVSNTLA 422
+V D+E+++ + S+ E + + + P +S N + S +
Sbjct: 65 HVTDSENDEPLNLNASDSESEELHRQKDSDSESEERAEPPASDSENEDVNQHGSDSESEE 124
Query: 423 KMRIPNYQLSPTKL----PSINKSKDRASQQQQTNSIRNYFQ-PSTKKRERDEENQEMSS 477
++P +L S ++++D + I + P++ D ++S
Sbjct: 125 TRKLPGSDSENEELLNGHASDSENEDVGKHPASDSEIEELQKSPASDSETEDALKPQISD 184
Query: 478 CKSA---RIETSCSLLEQTQPATPSLWKNKEQHLSENEPVDTNSDN---NLFTDTDLKSI 531
+S R + S S E +P P + ++ + L + + D+ S+ + +D++ + +
Sbjct: 185 SESEEPPRHQASDS--ENEEPPKPRMSDSESEELPKPQVSDSESEEPPRHQASDSENEEL 242
Query: 532 VKNSASKSHAAEKLRSNK---------KREMDDVAIEDEVLEQLFKDTKPELEIDVKVQK 582
K S S + + R K + D ED Q EL +V
Sbjct: 243 PKPRISDSESEDPPRHQASDSENEELPKPRISDSESEDPPRNQASDSENEELP-KPRVSD 301
Query: 583 QEEDVNVRKRPRMDIETNDTFSDEAVPESSKISQENEIGKKRELKEDSLWSAKEISNNDK 642
E + +K P D ET D + PES S G+ E++ DS S +
Sbjct: 302 SESE-GPQKGPASDSETEDASRHKQKPESDDDSDRENKGEDTEMQNDSFHSDSHMDRKKF 360
Query: 643 LQDDSE 648
DSE
Sbjct: 361 HSSDSE 366
>gi|109255228 centrosomal protein 170kDa isoform alpha [Homo
sapiens]
Length = 1584
Score = 45.1 bits (105), Expect = 2e-04
Identities = 59/238 (24%), Positives = 103/238 (43%), Gaps = 30/238 (12%)
Query: 11 AGGEPYRLLTGVEYVVGRKNCAILIENDQSISRNHAVLTANFSVTNLSQTDEIPVLTLKD 70
+GG +RL + +V GR +C +++++ +S+ + HAV+ + S TDE V L
Sbjct: 11 SGGTRHRLPREMIFV-GRDDCELMLQS-RSVDKQHAVINYDAS------TDEHLVKDL-- 60
Query: 71 NSKYGTFVNEEKMQNGFSRTLKSGDGITFGVFGSKFRIEYEPLVACSSCLDVSGKTALNQ 130
S GTFVN+ ++ TLK D + FG + F + V G+ + +
Sbjct: 61 GSLNGTFVNDVRIPEQTYITLKLEDKLRFGYDTNLFTV-------------VQGEMRVPE 107
Query: 131 AILQLGGFTVNNWTEECTHLVMVSVKVTIKTICALICGRPIVKPEYFTEFLKAVESKKQP 190
L+ FT+ + + +S + K+I + + TE LK+ E
Sbjct: 108 EALKHEKFTIQLQLSQKSSESELSKSASAKSIDSKVADAATEVQHKTTEALKSEEKAMDI 167
Query: 191 PQIESFYPPLDEPS-IGSKNVD------LSGRQERKQIFKGKTFIFLNAKQHKKLSSA 241
+ P +PS G VD +G+ E K G + ++AKQ ++ S+A
Sbjct: 168 SAMPRGTPLYGQPSWWGDDEVDEKRAFKTNGKPEEKNHEAGTSGCGIDAKQVEEQSAA 225
>gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo
sapiens]
Length = 570
Score = 44.3 bits (103), Expect = 4e-04
Identities = 48/290 (16%), Positives = 117/290 (40%), Gaps = 20/290 (6%)
Query: 370 EQADTWDLSERPKEIKVSKMEQKFR----MLSQDAPTVKESCKTSSNNNSMVSNTLAKMR 425
E+ + W+ + +E K+ + E+K + + + ++E + M+ KMR
Sbjct: 274 EENELWNRLNQQQEEKMWRQEEKIQEREEKIQEQEEKIREQEEKMRRQEEMMWEKEEKMR 333
Query: 426 IPNYQLSPTKLPSINKSKDRASQQQQTNSIRNYFQPSTKKRERDEENQEMSSCKSARIET 485
++ K I + +++ +Q++ Q K RE+++ ++ K R E
Sbjct: 334 RQE-EMMWEKEEKIRELEEKMHEQEKIREQEEKRQEEEKIREQEKRQEQ--EAKMWRQEE 390
Query: 486 SCSLLEQTQPATPSLWKNKEQHLSENEPVDTNSDNNLFTDTDLKSIVKNSASKSHAAEKL 545
E+ + + +E+ + E E + + + + + +
Sbjct: 391 KIREQEEKIREQEEMMQEQEEKMGEQEEKMWEQEEEMQEQEEKMRRQEEKIREQEKKIRE 450
Query: 546 RSNKKREMDDVAIEDEVLEQLFKDTKPELEIDVKVQKQEEDVNVRKRPRMDIETNDTFSD 605
+ K RE +++ E E E++ + E + K+Q+QEE + ++ + E +
Sbjct: 451 QEEKIREQEEMMQEQE--EKMGEQEGKMCEQEAKMQEQEEKMRRQEEKIREQEKKIREQE 508
Query: 606 EAVPESSKISQENEIGKKRELKEDSLWSAKE--ISNNDKLQDDSEMLPKK 653
E + E ++ QE +E+ +W +E +K+Q+ E + ++
Sbjct: 509 EKIREQEEMMQE---------QEEKMWEQEEKMCEQEEKMQEQEEKMRRQ 549
Score = 30.8 bits (68), Expect = 4.8
Identities = 44/262 (16%), Positives = 105/262 (40%), Gaps = 32/262 (12%)
Query: 385 KVSKMEQKFRMLSQDAPTVKESCKTSSNNNSMVSNTLAKMRIPNYQLSPT------KLPS 438
K +K+++K +++ + ++ + K AK+ +P QL +L S
Sbjct: 210 KNAKLQEKLQLVESEKSEIQLNVKELKRKLER-----AKLLLPQQQLQAEADHLGKELQS 264
Query: 439 I----------NKSKDRASQQQQTNSIRN---YFQPSTKKRERDEENQEMSSCKSARIET 485
+ N+ +R +QQQ+ R + K +E++E+ +E + E
Sbjct: 265 VSAKLQAQVEENELWNRLNQQQEEKMWRQEEKIQEREEKIQEQEEKIREQEEKMRRQEEM 324
Query: 486 SCSLLEQTQPATPSLWKNKE------QHLSENEPVDTNSDNNLFTDT--DLKSIVKNSAS 537
E+ + +W+ +E + + E E + + + + + + A
Sbjct: 325 MWEKEEKMRRQEEMMWEKEEKIRELEEKMHEQEKIREQEEKRQEEEKIREQEKRQEQEAK 384
Query: 538 KSHAAEKLRSNKKREMDDVAIEDEVLEQLFKDTKPELEIDVKVQKQEEDVNVRKRPRMDI 597
EK+R +++ + + E E++ + + E + ++Q+QEE + ++ +
Sbjct: 385 MWRQEEKIREQEEKIREQEEMMQEQEEKMGEQEEKMWEQEEEMQEQEEKMRRQEEKIREQ 444
Query: 598 ETNDTFSDEAVPESSKISQENE 619
E +E + E ++ QE E
Sbjct: 445 EKKIREQEEKIREQEEMMQEQE 466
>gi|118498362 kinectin 1 isoform b [Homo sapiens]
Length = 1306
Score = 43.9 bits (102), Expect = 6e-04
Identities = 62/294 (21%), Positives = 118/294 (40%), Gaps = 26/294 (8%)
Query: 377 LSERPKEIKVSKMEQKFRMLSQDAPTVKESCKTSSNNNSMVSNTLAKMRIPNYQLSPTKL 436
+SE+P + V +ME+ + + TV+E +T + L +R N L+
Sbjct: 721 VSEQPNKDVVEQMEKCIQEKDEKLKTVEELLETGLIQVATKEEELNAIRTENSSLTKEVQ 780
Query: 437 PSINKSKDRASQQQQTNSIRNYFQPSTKKRERDEENQEMSSCKSARIETSCSL-LEQTQP 495
K D+ S ++ K + EE E K A E + L +
Sbjct: 781 DLKAKQNDQVSFASLVEELKKVIHEKDGKIKSVEELLEAELLKVANKEKTVQLSITSKVQ 840
Query: 496 ATPSLWKNKEQHLSENEPVDTNSDNNLFTD----TDLKSIVKNSASKSHAAEKLRSNKKR 551
+L K KE+ ++ + V + +L DL+ +N + K+H E + N K
Sbjct: 841 ELQNLLKGKEEQMNTMKAVLEEKEKDLANTGKWLQDLQE--ENESLKAHVQEVAQHNLKE 898
Query: 552 EMDDVAIEDEVLEQLFKDTKPELE-IDVKVQKQEEDVNVRKRPRMDIETN--------DT 602
A + E LE + K+ + EL+ ++ ++++E D++ + + D++ +
Sbjct: 899 ASS--ASQFEELEIVLKEKENELKRLEAMLKERESDLSSKTQLLQDVQDENKLFKSQIEQ 956
Query: 603 FSDEAVPESSKISQENEIGK---KRELKEDSLWSAKEISNNDKLQDDSEMLPKK 653
+ ++S E+ K +RE + LW + D L+D E KK
Sbjct: 957 LKQQNYQQASSFPPHEELLKVISEREKEISGLW-----NELDSLKDAVEHQRKK 1005
>gi|150010558 myosin, heavy polypeptide 15 [Homo sapiens]
Length = 1946
Score = 43.1 bits (100), Expect = 0.001
Identities = 48/214 (22%), Positives = 101/214 (47%), Gaps = 21/214 (9%)
Query: 467 ERDEENQEMSSCKSAR---IETSC-SLLEQTQPATPSLWKNKEQHLSENEPVDTNSDNNL 522
ER EE +E++S +AR +E C L ++ L K++++ + V ++
Sbjct: 936 ERVEEEEEINSELTARGRKLEDECFELKKEIDDLETMLVKSEKEKRTTEHKVKNLTEEVE 995
Query: 523 FTDTDLKSIVKNSASKSHAAEKLRSNKKREMDDVAIEDEVLEQLFKDTKPELEIDVKVQK 582
F + D+ + + AA+ ++ ++ +DD+ +E+E L L +K L+++ +V +
Sbjct: 996 FLNEDISKL-------NRAAKVVQEAHQQTLDDLHMEEEKLSSL---SKANLKLEQQVDE 1045
Query: 583 QEEDVNVRKRPRMDIETNDTFSDEAVPESSKISQENEIGKKRELKEDSLWSAKEISN-ND 641
E + ++ RM+ E + E + ++ S EN +R L E+ E+S N
Sbjct: 1046 LEGALEQERKARMNCE-RELHKLEGNLKLNRESMENLESSQRHLAEELRKKELELSQMNS 1104
Query: 642 KLQDDSEMLPK-----KLLLTEFRSLVIKNSTSR 670
K++++ ++ + K L T+ + L K R
Sbjct: 1105 KVENEKGLVAQLQKTVKELQTQIKDLKEKLEAER 1138
>gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 750
Score = 42.4 bits (98), Expect = 0.002
Identities = 53/302 (17%), Positives = 123/302 (40%), Gaps = 48/302 (15%)
Query: 385 KVSKMEQKFRMLSQDAPTVKESCKTSSNNNSMVSNTLAKMRIPNYQLSPT------KLPS 438
K +K+++K +++ + ++ + K AK+ +P QL +L S
Sbjct: 222 KNAKLQEKLQLVESEKSEIQLNVKELKRKLER-----AKLLLPQQQLQAEADHLGKELQS 276
Query: 439 I----------NKSKDRASQQQQTNSIRN----------YFQPSTKKRERDEENQEMSSC 478
+ N+ +R +QQQ+ R + K RE++E+ +E
Sbjct: 277 VSAKLQAQVEENELWNRLNQQQEEKMWRQEEKIQEWEEKIQEQEEKIREQEEKIREQEEK 336
Query: 479 KSARIETSCSLLEQTQPATPSLWKNKEQHLSENEPVDTNSDNNLFTDTDL----KSIVKN 534
+ E E+ + +W+ KE+ + E + + + ++ + ++
Sbjct: 337 MRRQEEMMWEKEEKMRRQEEMMWE-KEEKMRRQEEMMWEKEEKMRRQEEMMWEKEEKIRE 395
Query: 535 SASKSHAAEKLRSNKKREMDDVAIEDEVLEQLFKDTKPELEIDVKVQKQEEDVNVRKRPR 594
K H EK+R +++ ++ I ++ Q E + K+ +QEE + ++
Sbjct: 396 LEEKMHEQEKIREQEEKRQEEEKIREQEKRQ---------EQEAKMWRQEEKIREQEEKI 446
Query: 595 MDIETNDTFSDEAVPESSKISQENEIGKKREL--KEDSLWSAKEI-SNNDKLQDDSEMLP 651
+ E +E + E KI +E + ++ E+ +E+ + +EI +K+ + E +
Sbjct: 447 REQEKKMWRQEEKIHEQEKIREEEKRQEQEEMWRQEEKIHEQEEIWRQKEKMHEQEEKIR 506
Query: 652 KK 653
K+
Sbjct: 507 KQ 508
Score = 33.9 bits (76), Expect = 0.57
Identities = 33/187 (17%), Positives = 79/187 (42%), Gaps = 20/187 (10%)
Query: 469 DEENQEMSSCKSARIETSCSLLEQTQPATPSLWKNKEQHLSENEPVDTNSDNNLFTDTDL 528
+EE ++ K R E E+ + +W+ +E+ + E E + ++ +
Sbjct: 561 EEEKRQEQEDKMWRQE------EKIREQEEKVWRQEEK-IREQEEKRQEQEEKMWKQEE- 612
Query: 529 KSIVKNSASKSHAAEKLRSNKKREMDDVAIEDEVLEQLFKDTKPELEIDVKVQKQEEDVN 588
I + EK+R +++ + + E E++ + + E + K+Q+QEE +
Sbjct: 613 -KIREQEEKIQEQEEKIREQEEKIREQEEMTQEQEEKMGEQEEKMCEQEEKMQEQEETMW 671
Query: 589 VRKRPRMDIETNDTFSDEAVPESSKISQENEIGKKRELKEDSLWSAKE--ISNNDKLQDD 646
++ + E +E + E ++ QE +E+ +W +E +K+Q+
Sbjct: 672 RQEEKIREQEKKIREQEEKIREQEEMMQE---------QEEKMWEQEEKMCEQEEKMQEQ 722
Query: 647 SEMLPKK 653
E + ++
Sbjct: 723 EEKMRRQ 729
Score = 33.5 bits (75), Expect = 0.75
Identities = 37/217 (17%), Positives = 83/217 (38%), Gaps = 27/217 (12%)
Query: 370 EQADTWDLSERPK-EIKVSKMEQKFRMLSQDAPTVKESCKTSSNNNSMVSNTLAKMRIPN 428
EQ W+ +R + E K+ + E+K R + +E + + K
Sbjct: 555 EQEKIWEEEKRQEQEDKMWRQEEKIREQEEKVWRQEEKIREQEEKRQEQEEKMWKQE--- 611
Query: 429 YQLSPTKLPSINKSKDRASQQQQTNSIRNYFQPSTKKRERDEENQEMSSCKSARIETSCS 488
I + +++ +Q++ IR + K RE++E QE + E C
Sbjct: 612 --------EKIREQEEKIQEQEE--KIR---EQEEKIREQEEMTQEQEEKMGEQEEKMCE 658
Query: 489 LLEQTQPATPSLWKNKEQHLSENEPVDTNSDNNLFTDTDLKSIVKNSASKSHAAEKLRSN 548
E+ Q ++W+ +E+ + + + + I + EK+
Sbjct: 659 QEEKMQEQEETMWRQEEKIREQEKKIREQEE----------KIREQEEMMQEQEEKMWEQ 708
Query: 549 KKREMDDVAIEDEVLEQLFKDTKPELEIDVKVQKQEE 585
+++ + E E++ + + E +V++++QEE
Sbjct: 709 EEKMCEQEEKMQEQEEKMRRQEEKMWEQEVRLRQQEE 745
>gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [Homo
sapiens]
Length = 1940
Score = 42.4 bits (98), Expect = 0.002
Identities = 64/264 (24%), Positives = 114/264 (43%), Gaps = 39/264 (14%)
Query: 388 KMEQKFRMLSQDAPTVKESCKTSSNNNSMVSNTLAKMRIPNYQLSPTKLPSINKSKDRAS 447
K+ K + L + A T KE T + LAK +L KL ++ + K+
Sbjct: 832 KLFFKIKPLLKSAETEKEMA-TMKEEFQKTKDELAKSEAKRKELEE-KLVTLVQEKNDLQ 889
Query: 448 QQQQTNS-------------IRNYFQPSTKKRE---RDEENQEMSS---CKSARIETSCS 488
Q Q S I+ FQ K +E R E+ +E+++ K ++E CS
Sbjct: 890 LQVQAESENLLDAEERCDQLIKAKFQLEAKIKEVTERAEDEEEINAELTAKKRKLEDECS 949
Query: 489 -LLEQTQPATPSLWK-NKEQHLSENEPVDTNSDNNLFTDTDLKSIVKNSASKSHAAEKLR 546
L + +L K KE+H +EN+ + +L + + A + + L+
Sbjct: 950 ELKKDIDDLELTLAKVEKEKHATENKVKNLTE--------ELSGLDETIAKLTREKKALQ 1001
Query: 547 SNKKREMDDVAIEDEVLEQLFKDTKPELEIDVKVQKQEEDVNVRKRPRMDIETN--DTFS 604
++ +DD+ E++ + L K TK +LE +V+ E + K+ R+D+E N
Sbjct: 1002 EAHQQALDDLQAEEDKVNSLNK-TKSKLE--QQVEDLESSLEQEKKLRVDLERNKRKLEG 1058
Query: 605 DEAVPESSKISQENEIGKKRELKE 628
D + + S + EN+ K++L E
Sbjct: 1059 DLKLAQESILDLEND---KQQLDE 1079
>gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1
[Homo sapiens]
Length = 651
Score = 42.4 bits (98), Expect = 0.002
Identities = 52/287 (18%), Positives = 118/287 (41%), Gaps = 16/287 (5%)
Query: 367 TESEQADTWDLSERPKEIKVS-KMEQKFRMLSQDAPTVKESCKTSSNNNSMVSNTLAKMR 425
+++E D+ D + K++K + K + K + + +D + S + K++
Sbjct: 296 SDAESEDSKDAKKDSKKVKKNVKKDDKKKDVKKDTESTDAESGDSKDERKDTKKDKKKLK 355
Query: 426 IPNYQLSPTKLPSINKSKDRASQQQQTNSIRNYFQPSTKKRERDEENQEMSSCKSARIET 485
+ + K P ++ ++ + +S +++D + S+ + +E+
Sbjct: 356 KDDKKKDTKKYPESTDTESGDAKDARNDSRNLKKASKNDDKKKDAKKITFSTDSESELES 415
Query: 486 SCSLLEQTQPATPSLWKNKEQHLSENEPVDTNSDNNLFTDTDLKSIVKNSASKSHAAEKL 545
S ++ + S NK+ ++ E D +S+ + K + K +
Sbjct: 416 KESQKDEKKDKKDSKTDNKKSVKNDEESTDADSEPKGDSKKGKKD--EKKGKKDSKKDDK 473
Query: 546 RSNKKREMDDVAIEDEVLEQLFKDTKPELEIDVKVQKQEEDVNVRKRPRMDIETNDTFSD 605
+ + K+ + +E ++ +L KD K E K+ +++K R D E+ D D
Sbjct: 474 KKDAKKNAESTEMESDL--ELKKDKKHSKE------KKGSKKDIKKDARKDTESTDAEFD 525
Query: 606 EAVPESSKISQENEIGKKRELKEDSLW---SAKEISNNDKLQDDSEM 649
E+ K S + + G E E+SL+ + K+I +D +S+M
Sbjct: 526 ESSKTGFKTSTKIK-GSDTE-SEESLYKPGAKKKIDESDGTSANSKM 570
Score = 37.0 bits (84), Expect = 0.068
Identities = 76/370 (20%), Positives = 145/370 (39%), Gaps = 43/370 (11%)
Query: 378 SERPKEIKVSKMEQKFRMLSQDAPTVKESC-----KTSSNNNSMVSNTLAKMRIPNYQLS 432
S ++ K SK + SQ++ TV ++C K S N+ + L P L
Sbjct: 166 SHENEQSKKSKSSSETNPESQNSKTVSKNCSQKDKKDSKNSKKTNTEFLHTKNNPKKDLK 225
Query: 433 PTKLPSINKSKDRASQQQQTNSIRNYFQPSTKKRERDEENQEMSSCKSARIETSCSLLEQ 492
+K S D S+ NS+ F + + + N + ++ + L+
Sbjct: 226 RSKT-----SNDPISEICSENSLNVDFLMLVGQSDDESINFDAWLRNYSQNNSKNYSLKY 280
Query: 493 TQPATPSLWKNKEQHLSENEPVDTNSDNNLFTDTDLKSIVKNSASKSHAAEKLRSNKKRE 552
T+ + K+ + + D S+++ D K + KN + + + +
Sbjct: 281 TK------YTKKDTKKNAKKSSDAESEDSKDAKKDSKKVKKNVKKDDKKKDVKKDTESTD 334
Query: 553 MDDVAIEDEVLEQLFKDTKPELEIDVKVQKQEEDVNVRKRPRMDIETNDTFSDEAV---- 608
+ +DE KDTK + + K++K ++ + +K P E+ DT S +A
Sbjct: 335 AESGDSKDER-----KDTKKDKK---KLKKDDKKKDTKKYP----ESTDTESGDAKDARN 382
Query: 609 -PESSKISQENEIGKKRELKEDSLWSAKEISNNDKLQDDSEMLPKKLLLTEFRSLVIKNS 667
+ K + +N+ KK++ K+ + + E K E KK T+ + V +
Sbjct: 383 DSRNLKKASKND-DKKKDAKKITFSTDSESELESKESQKDEKKDKKDSKTDNKKSVKNDE 441
Query: 668 TSRNPSGINDDYGQLKNFKKFKKVTYPGAGKLPHIIGGSDLIAHHARKNTELEEWLRQEM 727
S + ++ G K KK +K GK A ++TE+E L E+
Sbjct: 442 ESTDAD--SEPKGDSKKGKKDEK-----KGKKDSKKDDKKKDAKKNAESTEMESDL--EL 492
Query: 728 EVQNQHAKEE 737
+ +H+KE+
Sbjct: 493 KKDKKHSKEK 502
>gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin (with
transmembrane signal), 1 [Homo sapiens]
Length = 3259
Score = 42.4 bits (98), Expect = 0.002
Identities = 61/303 (20%), Positives = 120/303 (39%), Gaps = 54/303 (17%)
Query: 377 LSERPKEIKVSKMEQK--FRMLSQDAPTVKESCKTSSNNNSMVSNTLAKMRIPNYQLSPT 434
L ER ++ K + K + L + T+ T M+ + KM + N Q+
Sbjct: 1845 LKERIAGLEEEKQKNKEFSQTLENEKNTLLSQISTKDGELKMLQEEVTKMNLLNQQIQE- 1903
Query: 435 KLPSINKSKDRASQQQQ-------------TNSIRNYFQPSTKKRERDEE-NQEMSSCKS 480
+L + K K+ A +++ SI NY Q T + ++E EM + K
Sbjct: 1904 ELSRVTKLKETAEEEKDDLEERLMNQLAELNGSIGNYCQDVTDAQIKNELLESEMKNLKK 1963
Query: 481 ARIETSCSLLEQTQPATPSLWKNKEQHLSENEPVDTNSDNNLFTDTDLKSIVKNSASKSH 540
E L + K+Q + E V++ ++ K +KSH
Sbjct: 1964 CVSE---------------LEEEKQQLVKEKTKVESEIRKEYLEK--IQGAQKEPGNKSH 2006
Query: 541 AAE--KLRSNKKREMDDV------------AIEDEVLEQLFKDTKPELEIDVKVQKQEED 586
A E +L K++E+ + A+E V F T+ + ++++ + +
Sbjct: 2007 AKELQELLKEKQQEVKQLQKDCIRYQEKISALERTVKALEFVQTESQKDLEITKENLAQA 2066
Query: 587 VNVRKRPRMDIETNDTFSDEAVPESSKISQENEIGKKRELKEDSLWSAKEISNNDKLQDD 646
V RK+ + ++ + D+ E++++ +N + K+EL+ S KE + Q D
Sbjct: 2067 VEHRKKAQAELASFKVLLDDTQSEAARVLADN-LKLKKELQ-----SNKESVKSQMKQKD 2120
Query: 647 SEM 649
++
Sbjct: 2121 EDL 2123
Score = 36.6 bits (83), Expect = 0.088
Identities = 60/285 (21%), Positives = 121/285 (42%), Gaps = 19/285 (6%)
Query: 382 KEIKVSKMEQKFRMLSQDAPTVKESCKTSSNNNSMVSNTLAKMRIPNYQLSPTKLPSINK 441
KE++++KM+Q +D T++++ + + +S ++ + + QL+ K +
Sbjct: 871 KELEITKMDQLLLEKKRDVETLQQTIEEKDQQVTEISFSMTEKMV---QLNEEK---FSL 924
Query: 442 SKDRASQQQQTNSIRNYFQPSTKKRERDEENQEMSSCKSARIETSCS---LLEQTQPATP 498
+ + ++Q N + KK + +E+N+ S K E S + E+ Q
Sbjct: 925 GVEIKTLKEQLNLLSR--AEEAKKEQVEEDNEVSSGLKQNYDEMSPAGQISKEELQHEFD 982
Query: 499 SLWKNKEQHLSENEPVDTNSDNNLFTDTDLKSIVKNSASKSHAAEKLRSNKKREMDDVAI 558
L K EQ + + N L + L+ + N +S L ++ E+++
Sbjct: 983 LLKKENEQRKRKLQAALINRKELLQRVSRLEEELANLKDESKKEIPLSETERGEVEEDKE 1042
Query: 559 EDEVLEQLFKDTKPELEIDVKVQKQEEDV---NVRKRPRMDIETNDTFSDEAVPESSKIS 615
E E+ E+EI +K E++V ++RK + + F V + ++
Sbjct: 1043 NKEYSEKCVTSKCQEIEIYLKQTISEKEVELQHIRKDLEEKLAAEEQF-QALVKQMNQTL 1101
Query: 616 QE--NEIG-KKRELKEDSLWSAKEI-SNNDKLQDDSEMLPKKLLL 656
Q+ N+I + E+ E+ K I SN D DS L K+ ++
Sbjct: 1102 QDKTNQIDLLQAEISENQAIIQKLITSNTDASDGDSVALVKETVV 1146
>gi|253970456 HIV-1 Tat specific factor 1 [Homo sapiens]
Length = 755
Score = 42.0 bits (97), Expect = 0.002
Identities = 47/205 (22%), Positives = 85/205 (41%), Gaps = 26/205 (12%)
Query: 457 NYFQPSTKKRERDE---ENQEMSSCKSARIETSCSLLEQTQPATPSLWKNKEQHLSENEP 513
N + S+ ++E +E E + C E SCS E + N + E+ P
Sbjct: 447 NNAKESSPEKEAEEGCPEKESEEGCPKRGFEGSCSQKESEEG-------NPVRGSEEDSP 499
Query: 514 VDTNSDNNLFTDTDLKSIVKNSAS--KSHAAEKLRSNKKREMDDVAIE----------DE 561
+ L D + + K S + E++ K+ E DD E ++
Sbjct: 500 KKESKKKTLKNDCEENGLAKESEDDLNKESEEEVGPTKESEEDDSEKESDEDCSEKQSED 559
Query: 562 VLEQLFKDTKPELEIDVKVQKQEEDVNVRKRPRMDIETNDTFSDEAVPESSKISQENEIG 621
E+ F++ E ++D + ++E NV + ++E ND+ + E + S+ + E G
Sbjct: 560 GSEREFEENGLEKDLDEEGSEKELHENVLDK---ELEENDSENSEFEDDGSEKVLDEE-G 615
Query: 622 KKRELKEDSLWSAKEISNNDKLQDD 646
+RE EDS +E +K+ DD
Sbjct: 616 SEREFDEDSDEKEEEEDTYEKVFDD 640
>gi|21361437 HIV-1 Tat specific factor 1 [Homo sapiens]
Length = 755
Score = 42.0 bits (97), Expect = 0.002
Identities = 47/205 (22%), Positives = 85/205 (41%), Gaps = 26/205 (12%)
Query: 457 NYFQPSTKKRERDE---ENQEMSSCKSARIETSCSLLEQTQPATPSLWKNKEQHLSENEP 513
N + S+ ++E +E E + C E SCS E + N + E+ P
Sbjct: 447 NNAKESSPEKEAEEGCPEKESEEGCPKRGFEGSCSQKESEEG-------NPVRGSEEDSP 499
Query: 514 VDTNSDNNLFTDTDLKSIVKNSAS--KSHAAEKLRSNKKREMDDVAIE----------DE 561
+ L D + + K S + E++ K+ E DD E ++
Sbjct: 500 KKESKKKTLKNDCEENGLAKESEDDLNKESEEEVGPTKESEEDDSEKESDEDCSEKQSED 559
Query: 562 VLEQLFKDTKPELEIDVKVQKQEEDVNVRKRPRMDIETNDTFSDEAVPESSKISQENEIG 621
E+ F++ E ++D + ++E NV + ++E ND+ + E + S+ + E G
Sbjct: 560 GSEREFEENGLEKDLDEEGSEKELHENVLDK---ELEENDSENSEFEDDGSEKVLDEE-G 615
Query: 622 KKRELKEDSLWSAKEISNNDKLQDD 646
+RE EDS +E +K+ DD
Sbjct: 616 SEREFDEDSDEKEEEEDTYEKVFDD 640
>gi|213972636 tumor protein p53 binding protein 1 isoform 1 [Homo
sapiens]
Length = 1977
Score = 42.0 bits (97), Expect = 0.002
Identities = 66/363 (18%), Positives = 136/363 (37%), Gaps = 40/363 (11%)
Query: 317 MTTKNYCDPQGHPSTGLKTTTPGPSLSQGVSVDEKLMPSAPVNTTTYVADTESEQADTWD 376
M K + +G + ++ P SQG + E+ M S P+ +++ TE++
Sbjct: 653 MEIKEHHPEEGSSGSEVEEIPETPCESQGEELKEENMESVPL----HLSLTETQSQGLCL 708
Query: 377 LSERPKEIKVSKMEQKFRMLSQDAP------------TVKESCKTSSNNNSMVSNTLAKM 424
E PK+ ME + ++S D+P +E+ + +++ +S V K
Sbjct: 709 QKEMPKKECSEAMEVETSVISIDSPQKLAILDQELEHKEQEAWEEATSEDSSVVIVDVKE 768
Query: 425 RIPNYQLSPTKLPSINKSKDRASQQQQTNSIRNYFQPSTKKRERDEENQEM---SSCKSA 481
P +S L + K D Q I +P + R +E + + KS
Sbjct: 769 PSPRVDVSCEPLEGVEKCSD----SQSWEDIAPEIEPCAENRLDTKEEKSVEYEGDLKSG 824
Query: 482 RIETSCSLLEQTQPATPSLWKNKEQHLSE--NEPVDTNSDNNLFTDTDLKSIVKNSAS-- 537
ET + +QP+ P + + L + +P +N T+ + K +S
Sbjct: 825 TAETEPVEQDSSQPSLPLVRADDPLRLDQELQQPQTQEKTSNSLTEDSKMANAKQLSSDA 884
Query: 538 --------KSHAAEKLRSNKKREMDDVAI--EDEVLEQLFKDTKPEL-EIDVKVQKQEED 586
+HA++ + + E +++ L T P + + ++ ++
Sbjct: 885 EAQKLGKPSAHASQSFCESSSETPFHFTLPKEGDIIPPLTGATPPLIGHLKLEPKRHSTP 944
Query: 587 VNVRKRPRMDIETNDTFSDEAVPESSKI--SQENEIGKKRELKEDSLWSAKEISNNDKLQ 644
+ + P I T+D S+ V I S + + G ++ + K +S +
Sbjct: 945 IGISNYPESTIATSDVMSESMVETHDPILGSGKGDSGAAPDVDDKLCLRMKLVSPETEAS 1004
Query: 645 DDS 647
++S
Sbjct: 1005 EES 1007
>gi|213972634 tumor protein p53 binding protein 1 isoform 2 [Homo
sapiens]
Length = 1975
Score = 42.0 bits (97), Expect = 0.002
Identities = 66/363 (18%), Positives = 136/363 (37%), Gaps = 40/363 (11%)
Query: 317 MTTKNYCDPQGHPSTGLKTTTPGPSLSQGVSVDEKLMPSAPVNTTTYVADTESEQADTWD 376
M K + +G + ++ P SQG + E+ M S P+ +++ TE++
Sbjct: 653 MEIKEHHPEEGSSGSEVEEIPETPCESQGEELKEENMESVPL----HLSLTETQSQGLCL 708
Query: 377 LSERPKEIKVSKMEQKFRMLSQDAP------------TVKESCKTSSNNNSMVSNTLAKM 424
E PK+ ME + ++S D+P +E+ + +++ +S V K
Sbjct: 709 QKEMPKKECSEAMEVETSVISIDSPQKLAILDQELEHKEQEAWEEATSEDSSVVIVDVKE 768
Query: 425 RIPNYQLSPTKLPSINKSKDRASQQQQTNSIRNYFQPSTKKRERDEENQEM---SSCKSA 481
P +S L + K D Q I +P + R +E + + KS
Sbjct: 769 PSPRVDVSCEPLEGVEKCSD----SQSWEDIAPEIEPCAENRLDTKEEKSVEYEGDLKSG 824
Query: 482 RIETSCSLLEQTQPATPSLWKNKEQHLSE--NEPVDTNSDNNLFTDTDLKSIVKNSAS-- 537
ET + +QP+ P + + L + +P +N T+ + K +S
Sbjct: 825 TAETEPVEQDSSQPSLPLVRADDPLRLDQELQQPQTQEKTSNSLTEDSKMANAKQLSSDA 884
Query: 538 --------KSHAAEKLRSNKKREMDDVAI--EDEVLEQLFKDTKPEL-EIDVKVQKQEED 586
+HA++ + + E +++ L T P + + ++ ++
Sbjct: 885 EAQKLGKPSAHASQSFCESSSETPFHFTLPKEGDIIPPLTGATPPLIGHLKLEPKRHSTP 944
Query: 587 VNVRKRPRMDIETNDTFSDEAVPESSKI--SQENEIGKKRELKEDSLWSAKEISNNDKLQ 644
+ + P I T+D S+ V I S + + G ++ + K +S +
Sbjct: 945 IGISNYPESTIATSDVMSESMVETHDPILGSGKGDSGAAPDVDDKLCLRMKLVSPETEAS 1004
Query: 645 DDS 647
++S
Sbjct: 1005 EES 1007
>gi|5032189 tumor protein p53 binding protein 1 isoform 3 [Homo
sapiens]
Length = 1972
Score = 42.0 bits (97), Expect = 0.002
Identities = 66/363 (18%), Positives = 136/363 (37%), Gaps = 40/363 (11%)
Query: 317 MTTKNYCDPQGHPSTGLKTTTPGPSLSQGVSVDEKLMPSAPVNTTTYVADTESEQADTWD 376
M K + +G + ++ P SQG + E+ M S P+ +++ TE++
Sbjct: 648 MEIKEHHPEEGSSGSEVEEIPETPCESQGEELKEENMESVPL----HLSLTETQSQGLCL 703
Query: 377 LSERPKEIKVSKMEQKFRMLSQDAP------------TVKESCKTSSNNNSMVSNTLAKM 424
E PK+ ME + ++S D+P +E+ + +++ +S V K
Sbjct: 704 QKEMPKKECSEAMEVETSVISIDSPQKLAILDQELEHKEQEAWEEATSEDSSVVIVDVKE 763
Query: 425 RIPNYQLSPTKLPSINKSKDRASQQQQTNSIRNYFQPSTKKRERDEENQEM---SSCKSA 481
P +S L + K D Q I +P + R +E + + KS
Sbjct: 764 PSPRVDVSCEPLEGVEKCSD----SQSWEDIAPEIEPCAENRLDTKEEKSVEYEGDLKSG 819
Query: 482 RIETSCSLLEQTQPATPSLWKNKEQHLSE--NEPVDTNSDNNLFTDTDLKSIVKNSAS-- 537
ET + +QP+ P + + L + +P +N T+ + K +S
Sbjct: 820 TAETEPVEQDSSQPSLPLVRADDPLRLDQELQQPQTQEKTSNSLTEDSKMANAKQLSSDA 879
Query: 538 --------KSHAAEKLRSNKKREMDDVAI--EDEVLEQLFKDTKPEL-EIDVKVQKQEED 586
+HA++ + + E +++ L T P + + ++ ++
Sbjct: 880 EAQKLGKPSAHASQSFCESSSETPFHFTLPKEGDIIPPLTGATPPLIGHLKLEPKRHSTP 939
Query: 587 VNVRKRPRMDIETNDTFSDEAVPESSKI--SQENEIGKKRELKEDSLWSAKEISNNDKLQ 644
+ + P I T+D S+ V I S + + G ++ + K +S +
Sbjct: 940 IGISNYPESTIATSDVMSESMVETHDPILGSGKGDSGAAPDVDDKLCLRMKLVSPETEAS 999
Query: 645 DDS 647
++S
Sbjct: 1000 EES 1002
>gi|187936946 hypothetical protein LOC84140 [Homo sapiens]
Length = 660
Score = 41.6 bits (96), Expect = 0.003
Identities = 55/229 (24%), Positives = 97/229 (42%), Gaps = 42/229 (18%)
Query: 520 NNLFTDTDLKSIVKNSASKSHAAEKLRSNKKREMDDVAIEDE----VLEQLFKDTKPELE 575
NN++TD ++ ++ + HAAEK R +K + + + + + EQ K+ + +
Sbjct: 200 NNMWTDFCVEDYIRCKDTGFHAAEKRRKKRKEWVPTITVPEPFQMMIREQKKKEESMKSK 259
Query: 576 IDVK-----VQKQEEDVNVRKRPRMDIETNDTFSDEAVPESSKISQENEIGKKRELKEDS 630
D++ ++KQEED +K+ F VP S + +++ K++E + S
Sbjct: 260 SDIEMVHKALKKQEEDPEYKKK----------FRANPVPASVFLPLYHDLVKQKEERRRS 309
Query: 631 LWSAKEISNNDKLQDDSEMLPKKLLLTEFRSLVIKNSTSRNPSGINDDYGQLKNFKKFKK 690
L KE S L + P K + E + + QL++F K+KK
Sbjct: 310 L---KEKSKEALL---ASQKPFKFIAREEQKRAAREK-------------QLRDFLKYKK 350
Query: 691 VTYP-GAGKLPHIIGGSDLIAHHARKNTELEEWLRQEMEVQNQHAKEES 738
T A +P GS + K EL LR ++ Q +H + S
Sbjct: 351 KTNRFKARPIPRSTYGS--TTNDKLKEEELYRNLRTQLRAQ-EHLQNSS 396
>gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 668
Score = 41.2 bits (95), Expect = 0.004
Identities = 55/314 (17%), Positives = 131/314 (41%), Gaps = 35/314 (11%)
Query: 368 ESEQADTWDLSERPKEIKVSKMEQKFR----MLSQDAPTVKESCKTSSNNNSMVSNTLAK 423
+ E+ W+ + +E K+ + E+K R + + + E + M+ K
Sbjct: 305 QEEKIQEWEEKIQEQEEKIREQEEKIREQEEKMRRQEEMMWEKEEKMRRQEEMMWEKEEK 364
Query: 424 MRIPNYQLSPTKLPSINKSKDRASQQQQTNSIRNYFQPSTKKRERDEENQEMSSCKSARI 483
MR ++ K I + +++ +Q++ Q K RE+ E+ QE + +
Sbjct: 365 MRRLE-EMMWEKEEKIRELEEKMHEQEKIREQEEKRQEEEKIREQ-EKRQEQEAKMWRQE 422
Query: 484 ETSCSLLEQTQPATPSLWKNKEQ-HLSEN--EPVDTNSDNNLFTDTDL---KSIVKNSAS 537
E E+ + +W+ +E+ H E E ++ + + +
Sbjct: 423 EKIREQEEKIREQEKKMWRQEEKIHEQEKIREEEKRQEQEEMWRQEEKIREQEEIWRQKE 482
Query: 538 KSHAAEKLRSNKK---REMDDVAIEDEVL----EQLFKDTKPELEIDVKVQKQEEDVNVR 590
K H EK+R ++ R+ + + ++E + E++++ + E + K+++QEE + +
Sbjct: 483 KMHEQEKIRKQEEKVWRQEEKMHDQEEKIREQEEKMWRQEEKIREQEEKIREQEEKIREQ 542
Query: 591 KRPRMDIETNDTFSDEAVPESSKISQENEIGKKRELK-----------EDSLWSAKEISN 639
+ + E +E + E K+ ++ E +++E K E+ +W +E
Sbjct: 543 EEMMQEQEEKMGEQEEKMQEQEKMRRQEEKIREQEEKIREQKEKIREQEEKIWEQEE--- 599
Query: 640 NDKLQDDSEMLPKK 653
K+++ EM+ ++
Sbjct: 600 --KIREQEEMMQEQ 611
>gi|55770895 ERBB2 interacting protein isoform 7 [Homo sapiens]
Length = 1302
Score = 41.2 bits (95), Expect = 0.004
Identities = 52/277 (18%), Positives = 115/277 (41%), Gaps = 26/277 (9%)
Query: 397 SQDAPTVKESCKTSSNNNSMVSNTLAKMRIPNYQLSPTKLPSINKSKDRASQQQQTNSIR 456
S+ TVK K M+ N++ K+ P ++SP LP K + + N
Sbjct: 536 SESTTTVKS--KVDEREKYMIGNSVQKISEPEAEISPGSLPVTANMKASENLKHIVNH-D 592
Query: 457 NYFQPSTKKRERDEENQEMSSCKSARIETSCSLLEQTQPATPSLWKNKEQHLSENEPVDT 516
+ F+ S + +E +M+ + IETS + QP +L NK+ E + +
Sbjct: 593 DVFEES--EELSSDEEMKMAEMRPPLIETSIN-----QPKVVALSNNKKDDTKETDSLSD 645
Query: 517 NSDNNLFTDTDLKSIVKNSASKSHAAEKLRSNKKREMDDVAIEDEVLEQLFKDTKPELEI 576
+N ++ + S+ + R + ++ + +D L K T ++I
Sbjct: 646 EVTHN------------SNQNNSNCSSPSRMSDSVSLNTDSSQDTSLCSPVKQT--HIDI 691
Query: 577 DVKVQKQEEDVN--VRKRPRMDIETNDTFSDEAVPESSKISQENEIGKKRELKEDSLWSA 634
+ K+++++E+ N ++ ++ T + F + + + + ++ L E S+ S
Sbjct: 692 NSKIRQEDENFNSLLQNGDILNSSTEEKFKAHDKKDFNLPEYDLNVEERLVLIEKSVDST 751
Query: 635 KEISNNDKLQDDSEMLPKKLLLTEFRSLVIKNSTSRN 671
+ KL + L K + F+ +++ S +++
Sbjct: 752 ATADDTHKLDHINMNLNKLITNDTFQPEIMERSKTQD 788
>gi|8923909 ERBB2 interacting protein isoform 2 [Homo sapiens]
Length = 1371
Score = 41.2 bits (95), Expect = 0.004
Identities = 52/277 (18%), Positives = 115/277 (41%), Gaps = 26/277 (9%)
Query: 397 SQDAPTVKESCKTSSNNNSMVSNTLAKMRIPNYQLSPTKLPSINKSKDRASQQQQTNSIR 456
S+ TVK K M+ N++ K+ P ++SP LP K + + N
Sbjct: 536 SESTTTVKS--KVDEREKYMIGNSVQKISEPEAEISPGSLPVTANMKASENLKHIVNH-D 592
Query: 457 NYFQPSTKKRERDEENQEMSSCKSARIETSCSLLEQTQPATPSLWKNKEQHLSENEPVDT 516
+ F+ S + +E +M+ + IETS + QP +L NK+ E + +
Sbjct: 593 DVFEES--EELSSDEEMKMAEMRPPLIETSIN-----QPKVVALSNNKKDDTKETDSLSD 645
Query: 517 NSDNNLFTDTDLKSIVKNSASKSHAAEKLRSNKKREMDDVAIEDEVLEQLFKDTKPELEI 576
+N ++ + S+ + R + ++ + +D L K T ++I
Sbjct: 646 EVTHN------------SNQNNSNCSSPSRMSDSVSLNTDSSQDTSLCSPVKQT--HIDI 691
Query: 577 DVKVQKQEEDVN--VRKRPRMDIETNDTFSDEAVPESSKISQENEIGKKRELKEDSLWSA 634
+ K+++++E+ N ++ ++ T + F + + + + ++ L E S+ S
Sbjct: 692 NSKIRQEDENFNSLLQNGDILNSSTEEKFKAHDKKDFNLPEYDLNVEERLVLIEKSVDST 751
Query: 635 KEISNNDKLQDDSEMLPKKLLLTEFRSLVIKNSTSRN 671
+ KL + L K + F+ +++ S +++
Sbjct: 752 ATADDTHKLDHINMNLNKLITNDTFQPEIMERSKTQD 788
>gi|110815815 centlein isoform 1 [Homo sapiens]
Length = 1406
Score = 41.2 bits (95), Expect = 0.004
Identities = 62/324 (19%), Positives = 129/324 (39%), Gaps = 28/324 (8%)
Query: 346 VSVDEKLMPSAPVNTTTYVADTESEQADTWDLSERPKEIKVSKMEQKFRMLSQDAPTV-K 404
V +K+ P+ TE Q ++ + I + F + PT K
Sbjct: 888 VETSQKISPTEDGKDQKESDPTEDSQTQGKEIVQTYLNIDGKTPKDYFHDKNAKKPTFQK 947
Query: 405 ESCKTSSNNNSMVSNTLAKMRIPNYQLSPTKLPSINKSKDRASQQQQTNSIRNYFQPSTK 464
++CK ++++ V + + + N + I + S QQQ + ++N + +
Sbjct: 948 KNCKMQKSSHTAVPTRVNREKYKNITAQKSSSNIILLRERIISLQQQNSVLQNAKKTAEL 1007
Query: 465 K-RERDEENQEM---SSCKSARIETSCSLLEQTQPATPSLWKNKEQHL----SENEPVDT 516
+E E N+++ R +TS +++ L K KE L S +E
Sbjct: 1008 SVKEYKEVNEKLLHQQQVSDQRFQTSRQTIKKLNLDLAGLRKEKEDLLKKLESSSEITSL 1067
Query: 517 NSDNNLFT---------------DTDLKSIVKNSASKSHAAEKLRSNKKR-EMDDVAIED 560
+N+ T D ++K + + ++ K SN K + + +A E+
Sbjct: 1068 AEENSQVTFPRIQVTSLSPSRSMDLEMKQLQYKLKNATNELTKQSSNVKTLKFELLAKEE 1127
Query: 561 EVLEQLFKDTKPELEIDVKVQKQEEDVNVRKRPRMDIETNDTFSDEAVPESSKISQENEI 620
+ E K ++ E +I +K E+ ++ R ++++E+N +FS+ K+ E
Sbjct: 1128 HIKEMHEKISRMERDITMKRHLIED---LKFRQKVNLESNKSFSEMLQNLDKKVKTLTEE 1184
Query: 621 GKKRELKEDSLWSAKEISNNDKLQ 644
+++ DSL ++ +K Q
Sbjct: 1185 CSNKKVSIDSLKQRLNVAVKEKSQ 1208
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.128 0.363
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,462,511
Number of Sequences: 37866
Number of extensions: 1370099
Number of successful extensions: 4782
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 320
Number of HSP's that attempted gapping in prelim test: 4446
Number of HSP's gapped (non-prelim): 646
length of query: 754
length of database: 18,247,518
effective HSP length: 110
effective length of query: 644
effective length of database: 14,082,258
effective search space: 9068974152
effective search space used: 9068974152
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.