Search of human proteins with 33186887

Search of human proteins with 33186887

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|33186887 glutathione peroxidase 6 [Homo sapiens]
         (221 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|33186887 glutathione peroxidase 6 [Homo sapiens]                   457   e-129
gi|6006001 glutathione peroxidase 3 precursor [Homo sapiens]          330   4e-91
gi|4557629 glutathione peroxidase 5 isoform 1 precursor [Homo sa...   312   2e-85
gi|41406084 glutathione peroxidase 1 isoform 1 [Homo sapiens]         145   2e-35
gi|32967607 glutathione peroxidase 2 [Homo sapiens]                   138   4e-33
gi|6715602 glutathione peroxidase 5 isoform 2 precursor [Homo sa...    88   7e-18
gi|90903240 glutathione peroxidase 4 isoform C precursor [Homo s...    75   6e-14
gi|75709200 glutathione peroxidase 4 isoform A precursor [Homo s...    75   6e-14
gi|15618997 glutathione peroxidase 7 [Homo sapiens]                    72   3e-13
gi|192455698 glutathione peroxidase 8 [Homo sapiens]                   70   1e-12
gi|90903238 glutathione peroxidase 4 isoform B precursor [Homo s...    67   9e-12
gi|41406082 glutathione peroxidase 1 isoform 2 [Homo sapiens]          54   1e-07
gi|169216998 PREDICTED: similar to hCG1811022 [Homo sapiens]           29   2.8  
gi|239752285 PREDICTED: similar to hCG1811022 [Homo sapiens]           29   2.8  
gi|239746796 PREDICTED: similar to hCG1811022 [Homo sapiens]           29   2.8  
gi|13899219 GABA(A) receptor-associated protein like 1 [Homo sap...    29   2.8  
gi|74315997 l-myc-1 proto-oncogene isoform 1 [Homo sapiens]            29   3.6  
gi|74315995 l-myc-1 proto-oncogene isoform 1 [Homo sapiens]            29   3.6  
gi|6005764 GABA(A) receptor-associated protein [Homo sapiens]          28   4.7  

>gi|33186887 glutathione peroxidase 6 [Homo sapiens]
          Length = 221

 Score =  457 bits (1177), Expect = e-129
 Identities = 221/221 (100%), Positives = 221/221 (100%)

Query: 1   MFQQFQASCLVLFFLVGFAQQTLKPQNRKVDCNKGVTGTIYEYGALTLNGEEYIQFKQFA 60
           MFQQFQASCLVLFFLVGFAQQTLKPQNRKVDCNKGVTGTIYEYGALTLNGEEYIQFKQFA
Sbjct: 1   MFQQFQASCLVLFFLVGFAQQTLKPQNRKVDCNKGVTGTIYEYGALTLNGEEYIQFKQFA 60

Query: 61  GKHVLFVNVAAYUGLAAQYPELNALQEELKNFGVIVLAFPCNQFGKQEPGTNSEILLGLK 120
           GKHVLFVNVAAY GLAAQYPELNALQEELKNFGVIVLAFPCNQFGKQEPGTNSEILLGLK
Sbjct: 61  GKHVLFVNVAAYUGLAAQYPELNALQEELKNFGVIVLAFPCNQFGKQEPGTNSEILLGLK 120

Query: 121 YVCPGSGFVPSFQLFEKGDVNGEKEQKVFTFLKNSCPPTSDLLGSSSQLFWEPMKVHDIR 180
           YVCPGSGFVPSFQLFEKGDVNGEKEQKVFTFLKNSCPPTSDLLGSSSQLFWEPMKVHDIR
Sbjct: 121 YVCPGSGFVPSFQLFEKGDVNGEKEQKVFTFLKNSCPPTSDLLGSSSQLFWEPMKVHDIR 180

Query: 181 WNFEKFLVGPDGVPVMHWFHQAPVSTVKSDILEYLKQFNTH 221
           WNFEKFLVGPDGVPVMHWFHQAPVSTVKSDILEYLKQFNTH
Sbjct: 181 WNFEKFLVGPDGVPVMHWFHQAPVSTVKSDILEYLKQFNTH 221


>gi|6006001 glutathione peroxidase 3 precursor [Homo sapiens]
          Length = 226

 Score =  330 bits (847), Expect = 4e-91
 Identities = 154/217 (70%), Positives = 181/217 (83%)

Query: 1   MFQQFQASCLVLFFLVGFAQQTLKPQNRKVDCNKGVTGTIYEYGALTLNGEEYIQFKQFA 60
           M +  QASCL+   L GF  Q+   +  K+DC+ G++GTIYEYGALT++GEEYI FKQ+A
Sbjct: 1   MARLLQASCLLSLLLAGFVSQSRGQEKSKMDCHGGISGTIYEYGALTIDGEEYIPFKQYA 60

Query: 61  GKHVLFVNVAAYUGLAAQYPELNALQEELKNFGVIVLAFPCNQFGKQEPGTNSEILLGLK 120
           GK+VLFVNVA+Y GL  QY ELNALQEEL  FG+++L FPCNQFGKQEPG NSEIL  LK
Sbjct: 61  GKYVLFVNVASYUGLTGQYIELNALQEELAPFGLVILGFPCNQFGKQEPGENSEILPTLK 120

Query: 121 YVCPGSGFVPSFQLFEKGDVNGEKEQKVFTFLKNSCPPTSDLLGSSSQLFWEPMKVHDIR 180
           YV PG GFVP+FQLFEKGDVNGEKEQK +TFLKNSCPPTS+LLG+S +LFWEPMKVHDIR
Sbjct: 121 YVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIR 180

Query: 181 WNFEKFLVGPDGVPVMHWFHQAPVSTVKSDILEYLKQ 217
           WNFEKFLVGPDG+P+M W H+  VS VK DIL Y+++
Sbjct: 181 WNFEKFLVGPDGIPIMRWHHRTTVSNVKMDILSYMRR 217


>gi|4557629 glutathione peroxidase 5 isoform 1 precursor [Homo
           sapiens]
          Length = 221

 Score =  312 bits (799), Expect = 2e-85
 Identities = 147/220 (66%), Positives = 173/220 (78%)

Query: 1   MFQQFQASCLVLFFLVGFAQQTLKPQNRKVDCNKGVTGTIYEYGALTLNGEEYIQFKQFA 60
           M  Q +   L+   L  F Q + K +  K+DC+K   GTIY+Y A+ LN  EY+ FKQ+ 
Sbjct: 1   MTTQLRVVHLLPLLLACFVQTSPKQEKMKMDCHKDEKGTIYDYEAIALNKNEYVSFKQYV 60

Query: 61  GKHVLFVNVAAYUGLAAQYPELNALQEELKNFGVIVLAFPCNQFGKQEPGTNSEILLGLK 120
           GKH+LFVNVA Y GL AQYPELNALQEELK +G++VL FPCNQFGKQEPG N EIL GLK
Sbjct: 61  GKHILFVNVATYCGLTAQYPELNALQEELKPYGLVVLGFPCNQFGKQEPGDNKEILPGLK 120

Query: 121 YVCPGSGFVPSFQLFEKGDVNGEKEQKVFTFLKNSCPPTSDLLGSSSQLFWEPMKVHDIR 180
           YV PG GFVPSFQLFEKGDVNGEKEQKVF+FLK+SCP  S++LG+   + W+P+KVHDIR
Sbjct: 121 YVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIR 180

Query: 181 WNFEKFLVGPDGVPVMHWFHQAPVSTVKSDILEYLKQFNT 220
           WNFEKFLVGPDG+PVM W H+A VS+VK+DIL YLKQF T
Sbjct: 181 WNFEKFLVGPDGIPVMRWSHRATVSSVKTDILAYLKQFKT 220


>gi|41406084 glutathione peroxidase 1 isoform 1 [Homo sapiens]
          Length = 203

 Score =  145 bits (367), Expect = 2e-35
 Identities = 79/184 (42%), Positives = 105/184 (57%), Gaps = 5/184 (2%)

Query: 39  TIYEYGALTLNGEEYIQFKQFAGKHVLFVNVAAYUGLAAQ-YPELNALQEELKNFGVIVL 97
           ++Y + A  L G E +      GK +L  NVA+  G   + Y ++N LQ  L   G++VL
Sbjct: 15  SVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLUGTTVRDYTQMNELQRRLGPRGLVVL 74

Query: 98  AFPCNQFGKQEPGTNSEILLGLKYVCPGSGFVPSFQLFEKGDVNGEKEQKVFTFLKNSCP 157
            FPCNQFG QE   N EIL  LKYV PG GF P+F LFEK +VNG     +F FL+ + P
Sbjct: 75  GFPCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREALP 134

Query: 158 PTSD----LLGSSSQLFWEPMKVHDIRWNFEKFLVGPDGVPVMHWFHQAPVSTVKSDILE 213
             SD    L+     + W P+  +D+ WNFEKFLVGPDGVP+  +  +     ++ DI  
Sbjct: 135 APSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYSRRFQTIDIEPDIEA 194

Query: 214 YLKQ 217
            L Q
Sbjct: 195 LLSQ 198


>gi|32967607 glutathione peroxidase 2 [Homo sapiens]
          Length = 190

 Score =  138 bits (347), Expect = 4e-33
 Identities = 75/186 (40%), Positives = 107/186 (57%), Gaps = 7/186 (3%)

Query: 36  VTGTIYEYGALTLNGEEYIQFKQFAGKHVLFVNVAAYUGLAAQ-YPELNALQEELKNFGV 94
           +  + Y+  A++L+GE+ + F  F G+ VL  NVA+  G   + + +LN LQ       +
Sbjct: 4   IAKSFYDLSAISLDGEK-VDFNTFRGRAVLIENVASLUGTTTRDFTQLNELQCRFPR-RL 61

Query: 95  IVLAFPCNQFGKQEPGTNSEILLGLKYVCPGSGFVPSFQLFEKGDVNGEKEQKVFTFLKN 154
           +VL FPCNQFG QE   N EIL  LKYV PG G+ P+F L +K +VNG+ E  VF +LK+
Sbjct: 62  VVLGFPCNQFGHQENCQNEEILNSLKYVRPGGGYQPTFTLVQKCEVNGQNEHPVFAYLKD 121

Query: 155 SCPPTSD----LLGSSSQLFWEPMKVHDIRWNFEKFLVGPDGVPVMHWFHQAPVSTVKSD 210
             P   D    L+     + W P++  D+ WNFEKFL+GP+G P   +    P   ++ D
Sbjct: 122 KLPYPYDDPFSLMTDPKLIIWSPVRRSDVAWNFEKFLIGPEGEPFRRYSRTFPTINIEPD 181

Query: 211 ILEYLK 216
           I   LK
Sbjct: 182 IKRLLK 187


>gi|6715602 glutathione peroxidase 5 isoform 2 precursor [Homo
          sapiens]
          Length = 100

 Score = 87.8 bits (216), Expect = 7e-18
 Identities = 42/89 (47%), Positives = 56/89 (62%)

Query: 1  MFQQFQASCLVLFFLVGFAQQTLKPQNRKVDCNKGVTGTIYEYGALTLNGEEYIQFKQFA 60
          M  Q +   L+   L  F Q + K +  K+DC+K   GTIY+Y A+ LN  EY+ FKQ+ 
Sbjct: 1  MTTQLRVVHLLPLLLACFVQTSPKQEKMKMDCHKDEKGTIYDYEAIALNKNEYVSFKQYV 60

Query: 61 GKHVLFVNVAAYUGLAAQYPELNALQEEL 89
          GKH+LFVNVA Y GL AQYP ++   E+L
Sbjct: 61 GKHILFVNVATYCGLTAQYPGMSVQGEDL 89


>gi|90903240 glutathione peroxidase 4 isoform C precursor [Homo
           sapiens]
          Length = 234

 Score = 74.7 bits (182), Expect = 6e-14
 Identities = 52/177 (29%), Positives = 85/177 (48%), Gaps = 21/177 (11%)

Query: 39  TIYEYGALTLNGEEYIQFKQFAGKHVLFVNVAAYUGLA-AQYPELNALQEELKNFGVIVL 97
           +++E+ A  ++G   +   ++ G   +  NVA+  G     Y +L  L       G+ +L
Sbjct: 77  SMHEFSAKDIDGH-MVNLDKYRGFVCIVTNVASQUGKTEVNYTQLVDLHARYAECGLRIL 135

Query: 98  AFPCNQFGKQEPGTNSEILLGLKYVCPGSGFVPSFQLFEKGDVNGEKEQKVFTFLKNSCP 157
           AFPCNQFGKQEPG+N EI          +G+   F +F K  VNG+    ++ ++K   P
Sbjct: 136 AFPCNQFGKQEPGSNEEIKEF------AAGYNVKFDMFSKICVNGDDAHPLWKWMKIQ-P 188

Query: 158 PTSDLLGSSSQLFWEPMKVHDIRWNFEKFLVGPDGVPVMHWFHQAPVSTVKSDILEY 214
               +LG++            I+WNF KFL+  +G  V  +        ++ D+  Y
Sbjct: 189 KGKGILGNA------------IKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPHY 233


>gi|75709200 glutathione peroxidase 4 isoform A precursor [Homo
           sapiens]
          Length = 197

 Score = 74.7 bits (182), Expect = 6e-14
 Identities = 52/177 (29%), Positives = 85/177 (48%), Gaps = 21/177 (11%)

Query: 39  TIYEYGALTLNGEEYIQFKQFAGKHVLFVNVAAYUGLA-AQYPELNALQEELKNFGVIVL 97
           +++E+ A  ++G   +   ++ G   +  NVA+  G     Y +L  L       G+ +L
Sbjct: 40  SMHEFSAKDIDGH-MVNLDKYRGFVCIVTNVASQUGKTEVNYTQLVDLHARYAECGLRIL 98

Query: 98  AFPCNQFGKQEPGTNSEILLGLKYVCPGSGFVPSFQLFEKGDVNGEKEQKVFTFLKNSCP 157
           AFPCNQFGKQEPG+N EI          +G+   F +F K  VNG+    ++ ++K   P
Sbjct: 99  AFPCNQFGKQEPGSNEEIKEF------AAGYNVKFDMFSKICVNGDDAHPLWKWMKIQ-P 151

Query: 158 PTSDLLGSSSQLFWEPMKVHDIRWNFEKFLVGPDGVPVMHWFHQAPVSTVKSDILEY 214
               +LG++            I+WNF KFL+  +G  V  +        ++ D+  Y
Sbjct: 152 KGKGILGNA------------IKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPHY 196


>gi|15618997 glutathione peroxidase 7 [Homo sapiens]
          Length = 187

 Score = 72.4 bits (176), Expect = 3e-13
 Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 26/178 (14%)

Query: 41  YEYGALTLNGEEYIQFKQFAGKHVLFVNVAAYUGLAAQ-YPELNALQEELKNFGVIVLAF 99
           Y++ A+ + G+  +  +++ G   L VNVA+  G   Q Y  L  LQ +L      VLAF
Sbjct: 26  YDFKAVNIRGK-LVSLEKYRGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAF 84

Query: 100 PCNQFGKQEPGTNSEILLGLKYVCPGSGFVPSFQLFEKGDVNGEKEQKVFTFLKNSCPPT 159
           PCNQFG+QEP +N EI    +       +  SF +F K  V G      F +L  +    
Sbjct: 85  PCNQFGQQEPDSNKEIESFARRT-----YSVSFPMFSKIAVTGTGAHPAFKYLAQTSGK- 138

Query: 160 SDLLGSSSQLFWEPMKVHDIRWNFEKFLVGPDGVPVMHWFHQAPVSTVKSDILEYLKQ 217
                       EP       WNF K+LV PDG  V  W     V  V+  I   +++
Sbjct: 139 ------------EP------TWNFWKYLVAPDGKVVGAWDPTVSVEEVRPQITALVRK 178


>gi|192455698 glutathione peroxidase 8 [Homo sapiens]
          Length = 209

 Score = 70.5 bits (171), Expect = 1e-12
 Identities = 50/165 (30%), Positives = 76/165 (46%), Gaps = 25/165 (15%)

Query: 54  IQFKQFAGKHVLFVNVAAYUGLAAQ-YPELNALQEELKNFGVIVLAFPCNQFGKQEPGTN 112
           +  +++ GK  L VNVA+   L  + Y  L  L +E       VLAFPCNQFG+ EP  +
Sbjct: 60  VSLEKYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPS 119

Query: 113 SEILLGLKYVCPGSGFVPSFQLFEKGDVNGEKEQKVFTFLKNSCPPTSDLLGSSSQLFWE 172
            E+    +       +  +F +F K  + G + +  F FL +S                E
Sbjct: 120 KEVESFAR-----KNYGVTFPIFHKIKILGSEGEPAFRFLVDSSKK-------------E 161

Query: 173 PMKVHDIRWNFEKFLVGPDGVPVMHWFHQAPVSTVKSDILEYLKQ 217
           P      RWNF K+LV P+G  V  W  + P+  ++ DI   ++Q
Sbjct: 162 P------RWNFWKYLVNPEGQVVKFWKPEEPIEVIRPDIAALVRQ 200


>gi|90903238 glutathione peroxidase 4 isoform B precursor [Homo
           sapiens]
          Length = 227

 Score = 67.4 bits (163), Expect = 9e-12
 Identities = 47/149 (31%), Positives = 74/149 (49%), Gaps = 21/149 (14%)

Query: 39  TIYEYGALTLNGEEYIQFKQFAGKHVLFVNVAAYUGLA-AQYPELNALQEELKNFGVIVL 97
           +++E+ A  ++G   +   ++ G   +  NVA+  G     Y +L  L       G+ +L
Sbjct: 40  SMHEFSAKDIDGH-MVNLDKYRGFVCIVTNVASQUGKTEVNYTQLVDLHARYAECGLRIL 98

Query: 98  AFPCNQFGKQEPGTNSEILLGLKYVCPGSGFVPSFQLFEKGDVNGEKEQKVFTFLKNSCP 157
           AFPCNQFGKQEPG+N EI          +G+   F +F K  VNG+    ++ ++K   P
Sbjct: 99  AFPCNQFGKQEPGSNEEIKEF------AAGYNVKFDMFSKICVNGDDAHPLWKWMKIQ-P 151

Query: 158 PTSDLLGSSSQLFWEPMKVHDIRWNFEKF 186
               +LG++            I+WNF KF
Sbjct: 152 KGKGILGNA------------IKWNFTKF 168


>gi|41406082 glutathione peroxidase 1 isoform 2 [Homo sapiens]
          Length = 98

 Score = 53.9 bits (128), Expect = 1e-07
 Identities = 29/70 (41%), Positives = 40/70 (57%), Gaps = 1/70 (1%)

Query: 39  TIYEYGALTLNGEEYIQFKQFAGKHVLFVNVAAYUGLAAQ-YPELNALQEELKNFGVIVL 97
           ++Y + A  L G E +      GK +L  NVA+  G   + Y ++N LQ  L   G++VL
Sbjct: 15  SVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLUGTTVRDYTQMNELQRRLGPRGLVVL 74

Query: 98  AFPCNQFGKQ 107
            FPCNQFG Q
Sbjct: 75  GFPCNQFGHQ 84


>gi|169216998 PREDICTED: similar to hCG1811022 [Homo sapiens]
          Length = 334

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 6/57 (10%)

Query: 169 LFWEPMKVHD---IRWNFEKFLVGPDGVPVMH---WFHQAPVSTVKSDILEYLKQFN 219
           +F EP K+     +R N+ ++   PD  P  H   W  +A V T K  +LE+L + +
Sbjct: 228 IFGEPKKIITQDFVRENYLQYQQVPDSDPPRHQFLWGPRAHVETTKMKVLEFLAKIH 284


>gi|239752285 PREDICTED: similar to hCG1811022 [Homo sapiens]
          Length = 334

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 6/57 (10%)

Query: 169 LFWEPMKVHD---IRWNFEKFLVGPDGVPVMH---WFHQAPVSTVKSDILEYLKQFN 219
           +F EP K+     +R N+ ++   PD  P  H   W  +A V T K  +LE+L + +
Sbjct: 228 IFGEPKKIITQDFVRENYLQYQQVPDSDPPRHQFLWGPRAHVETTKMKVLEFLAKIH 284


>gi|239746796 PREDICTED: similar to hCG1811022 [Homo sapiens]
          Length = 334

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 6/57 (10%)

Query: 169 LFWEPMKVHD---IRWNFEKFLVGPDGVPVMH---WFHQAPVSTVKSDILEYLKQFN 219
           +F EP K+     +R N+ ++   PD  P  H   W  +A V T K  +LE+L + +
Sbjct: 228 IFGEPKKIITQDFVRENYLQYQQVPDSDPPRHQFLWGPRAHVETTKMKVLEFLAKIH 284


>gi|13899219 GABA(A) receptor-associated protein like 1 [Homo
           sapiens]
          Length = 117

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 14/45 (31%), Positives = 22/45 (48%)

Query: 120 KYVCPGSGFVPSFQLFEKGDVNGEKEQKVFTFLKNSCPPTSDLLG 164
           KY+ P    V  F    +  ++   E  +F F+ N+ PPTS  +G
Sbjct: 48  KYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNTIPPTSATMG 92


>gi|74315997 l-myc-1 proto-oncogene isoform 1 [Homo sapiens]
          Length = 364

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 20/103 (19%)

Query: 130 PSFQLFEKGDVNGEKEQK----------VFTFLKNSCPP------TSDLLGSSSQLFWEP 173
           P  ++ E+ D  GEKE +          V +    SC P      T D+    +  F E 
Sbjct: 233 PQEEVLER-DAAGEKEDEEDEEIVSPPPVESEAAQSCHPKPVSSDTEDVTKRKNHNFLER 291

Query: 174 MKVHDIRWNFEKFLVGPDGVPVMHWFHQAPVSTVKSDILEYLK 216
            + +D+R    +FL   D VP +    +AP   + S  LEYL+
Sbjct: 292 KRRNDLR---SRFLALRDQVPTLASCSKAPKVVILSKALEYLQ 331


>gi|74315995 l-myc-1 proto-oncogene isoform 1 [Homo sapiens]
          Length = 364

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 20/103 (19%)

Query: 130 PSFQLFEKGDVNGEKEQK----------VFTFLKNSCPP------TSDLLGSSSQLFWEP 173
           P  ++ E+ D  GEKE +          V +    SC P      T D+    +  F E 
Sbjct: 233 PQEEVLER-DAAGEKEDEEDEEIVSPPPVESEAAQSCHPKPVSSDTEDVTKRKNHNFLER 291

Query: 174 MKVHDIRWNFEKFLVGPDGVPVMHWFHQAPVSTVKSDILEYLK 216
            + +D+R    +FL   D VP +    +AP   + S  LEYL+
Sbjct: 292 KRRNDLR---SRFLALRDQVPTLASCSKAPKVVILSKALEYLQ 331


>gi|6005764 GABA(A) receptor-associated protein [Homo sapiens]
          Length = 117

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 15/49 (30%), Positives = 22/49 (44%)

Query: 120 KYVCPGSGFVPSFQLFEKGDVNGEKEQKVFTFLKNSCPPTSDLLGSSSQ 168
           KY+ P    V  F    +  ++   E  +F F+ N  PPTS  +G   Q
Sbjct: 48  KYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQ 96


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.139    0.433 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,851,859
Number of Sequences: 37866
Number of extensions: 412235
Number of successful extensions: 642
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 616
Number of HSP's gapped (non-prelim): 19
length of query: 221
length of database: 18,247,518
effective HSP length: 98
effective length of query: 123
effective length of database: 14,536,650
effective search space: 1788007950
effective search space used: 1788007950
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.