BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|32526915 StAR-related lipid transfer protein 5 [Homo sapiens] (213 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|32526915 StAR-related lipid transfer protein 5 [Homo sapiens] 449 e-126 gi|21040261 START domain containing protein 6 [Homo sapiens] 142 2e-34 gi|21040247 StAR-related lipid transfer (START) domain containin... 132 3e-31 gi|56243551 steroidogenic acute regulatory protein isoform 1 [Ho... 70 1e-12 gi|31543657 StAR-related lipid transfer (START) domain containin... 69 4e-12 gi|56117848 steroidogenic acute regulatory protein isoform 2 [Ho... 57 2e-08 gi|4504383 HGF activator preproprotein [Homo sapiens] 30 1.5 gi|151301035 START domain containing 7 [Homo sapiens] 29 3.4 gi|116268101 leucine rich repeat containing 62 [Homo sapiens] 28 5.8 gi|7019569 vacuolar protein sorting factor 4A [Homo sapiens] 27 9.9 >gi|32526915 StAR-related lipid transfer protein 5 [Homo sapiens] Length = 213 Score = 449 bits (1154), Expect = e-126 Identities = 213/213 (100%), Positives = 213/213 (100%) Query: 1 MDPALAAQMSEAVAEKMLQYRRDTAGWKICREGNGVSVSWRPSVEFPGNLYRGEGIVYGT 60 MDPALAAQMSEAVAEKMLQYRRDTAGWKICREGNGVSVSWRPSVEFPGNLYRGEGIVYGT Sbjct: 1 MDPALAAQMSEAVAEKMLQYRRDTAGWKICREGNGVSVSWRPSVEFPGNLYRGEGIVYGT 60 Query: 61 LEEVWDCVKPAVGGLRVKWDENVTGFEIIQSITDTLCVSRTSTPSAAMKLISPRDFVDLV 120 LEEVWDCVKPAVGGLRVKWDENVTGFEIIQSITDTLCVSRTSTPSAAMKLISPRDFVDLV Sbjct: 61 LEEVWDCVKPAVGGLRVKWDENVTGFEIIQSITDTLCVSRTSTPSAAMKLISPRDFVDLV 120 Query: 121 LVKRYEDGTISSNATHVEHPLCPPKPGFVRGFNHPCGCFCEPLPGEPTKTNLVTFFHTDL 180 LVKRYEDGTISSNATHVEHPLCPPKPGFVRGFNHPCGCFCEPLPGEPTKTNLVTFFHTDL Sbjct: 121 LVKRYEDGTISSNATHVEHPLCPPKPGFVRGFNHPCGCFCEPLPGEPTKTNLVTFFHTDL 180 Query: 181 SGYLPQNVVDSFFPRSMTRFYANLQKAVKQFHE 213 SGYLPQNVVDSFFPRSMTRFYANLQKAVKQFHE Sbjct: 181 SGYLPQNVVDSFFPRSMTRFYANLQKAVKQFHE 213 >gi|21040261 START domain containing protein 6 [Homo sapiens] Length = 220 Score = 142 bits (358), Expect = 2e-34 Identities = 68/201 (33%), Positives = 115/201 (57%), Gaps = 2/201 (0%) Query: 9 MSEAVAEKMLQYRRDTAGWKICREGNGVSVSWRPSVEFPGNLYRGEGIVYGTLEEVWDCV 68 +++ A+++L Y RDT+GWK+ + ++VS + S +F GNLYR EGI+ + ++ D + Sbjct: 6 IAQQTAQEVLGYNRDTSGWKVVKTSKKITVSSKASRKFHGNLYRVEGIIPESPAKLSDFL 65 Query: 69 KPAVGGLRVKWDENVTGFEIIQSITDTLCVSRTSTPSAAMKLISPRDFVDLVLVKRYEDG 128 G R+ WD+++ + ++ I + T T S A+ ISPRDF+DLV +KRYE Sbjct: 66 YQT--GDRITWDKSLQVYNMVHRIDSDTFICHTITQSFAVGSISPRDFIDLVYIKRYEGN 123 Query: 129 TISSNATHVEHPLCPPKPGFVRGFNHPCGCFCEPLPGEPTKTNLVTFFHTDLSGYLPQNV 188 ++ V+ P PP ++RG+NHPCG C P+ P + LV F T++ G L ++ Sbjct: 124 MNIISSKSVDFPEYPPSSNYIRGYNHPCGFVCSPMEENPAYSKLVMFVQTEMRGKLSPSI 183 Query: 189 VDSFFPRSMTRFYANLQKAVK 209 ++ P ++ F N + +K Sbjct: 184 IEKTMPSNLVNFILNAKDGIK 204 >gi|21040247 StAR-related lipid transfer (START) domain containing 4 [Homo sapiens] Length = 205 Score = 132 bits (331), Expect = 3e-31 Identities = 66/203 (32%), Positives = 112/203 (55%), Gaps = 6/203 (2%) Query: 7 AQMSEAVAEKMLQYRR-DTAGWKICREGNGVSVSWRPSVEFPGNLYRGEGIVYGTLEEVW 65 A + + ++QY + W++ ++ V+V +PS EF G LY+ +G++ + + Sbjct: 8 ASFATKLKNTLIQYHSIEEDKWRVAKKTKDVTVWRKPSEEFNGYLYKAQGVIDDLVYSII 67 Query: 66 DCVKPAVGGLRVKWDENVTGFEIIQSITDTLCVSRTSTPSAAMKLISPRDFVDLVLVKRY 125 D ++P G R+ WD +T +I+++ + CV R +T +ISPR+FVD Y Sbjct: 68 DHIRP--GPCRLDWDSLMTSLDILENFEENCCVMRYTTAGQLWNIISPREFVDFSYTVGY 125 Query: 126 EDGTISSNATHVEHPLCPPKPGFVRGFNHPCGCFCEPLPGEPTKTNLVTFFHTDLSGYLP 185 ++G +S + +P FVRG+NHPCG FC PL P ++ L + TDL G +P Sbjct: 126 KEGLLSCG---ISLDWDEKRPEFVRGYNHPCGWFCVPLKDNPNQSLLTGYIQTDLRGMIP 182 Query: 186 QNVVDSFFPRSMTRFYANLQKAV 208 Q+ VD+ ++T FY +L+KA+ Sbjct: 183 QSAVDTAMASTLTNFYGDLRKAL 205 >gi|56243551 steroidogenic acute regulatory protein isoform 1 [Homo sapiens] Length = 285 Score = 70.1 bits (170), Expect = 1e-12 Identities = 50/203 (24%), Positives = 93/203 (45%), Gaps = 4/203 (1%) Query: 8 QMSEAVAEKMLQYRRDTAGWKI-CREGNGVSVSWRPSVEFPGNLYRGEGIVYGTLEEVWD 66 Q E +K L + GWK ++ NG V + V G ++R E +V +E +++ Sbjct: 77 QQGEEAMQKALGILSNQEGWKKESQQDNGDKVMSKV-VPDVGKVFRLEVVVDQPMERLYE 135 Query: 67 CVKPAVGGLRVKWDENVTGFEIIQSITDTLCVSRTSTPSAAMKLISPRDFVDLVLVKRYE 126 + + + +W+ NV +++Q I ++ AA L+ PRDFV + KR Sbjct: 136 ELVERMEAMG-EWNPNVKEIKVLQKIGKDTFITHELAAEAAGNLVGPRDFVSVRCAKRRG 194 Query: 127 DGTISSNATHVEHPLCPPKPGFVRGFNHPCGCFCEPLPGEPTKTNLVTFFHTDLSGYLPQ 186 + + + P + G +R + P PL G P+KT L DL G+LP+ Sbjct: 195 STCVLAGMA-TDFGNMPEQKGVIRAEHGPTCMVLHPLAGSPSKTKLTWLLSIDLKGWLPK 253 Query: 187 NVVDSFFPRSMTRFYANLQKAVK 209 ++++ ++ F +L+K ++ Sbjct: 254 SIINQVLSQTQVDFANHLRKRLE 276 >gi|31543657 StAR-related lipid transfer (START) domain containing 3 [Homo sapiens] Length = 445 Score = 68.6 bits (166), Expect = 4e-12 Identities = 40/134 (29%), Positives = 65/134 (48%), Gaps = 1/134 (0%) Query: 77 VKWDENVTGFEIIQSITDTLCVSRTSTPSAAMKLISPRDFVDLVLVKRYEDGTISSNATH 136 V W++ VT +I+Q + D +S + AA ++SPRDFV++ ++R D +SS Sbjct: 308 VLWNKTVTACQILQRVEDNTLISYDVSAGAAGGVVSPRDFVNVRRIERRRDRYLSSGIA- 366 Query: 137 VEHPLCPPKPGFVRGFNHPCGCFCEPLPGEPTKTNLVTFFHTDLSGYLPQNVVDSFFPRS 196 H PP +VRG N P G P V +TDL G LP+ ++ + Sbjct: 367 TSHSAKPPTHKYVRGENGPGGFIVLKSASNPRVCTFVWILNTDLKGRLPRYLIHQSLAAT 426 Query: 197 MTRFYANLQKAVKQ 210 M F +L++ + + Sbjct: 427 MFEFAFHLRQRISE 440 >gi|56117848 steroidogenic acute regulatory protein isoform 2 [Homo sapiens] Length = 267 Score = 56.6 bits (135), Expect = 2e-08 Identities = 47/203 (23%), Positives = 88/203 (43%), Gaps = 22/203 (10%) Query: 8 QMSEAVAEKMLQYRRDTAGWKI-CREGNGVSVSWRPSVEFPGNLYRGEGIVYGTLEEVWD 66 Q E +K L + GWK ++ NG V + V G ++R E +V +E +++ Sbjct: 77 QQGEEAMQKALGILSNQEGWKKESQQDNGDKVMSKV-VPDVGKVFRLEVVVDQPMERLYE 135 Query: 67 CVKPAVGGLRVKWDENVTGFEIIQSITDTLCVSRTSTPSAAMKLISPRDFVDLVLVKRYE 126 + + + +W+ NV +++Q K+ PRDFV + KR Sbjct: 136 ELVERMEAMG-EWNPNVKEIKVLQ------------------KIGGPRDFVSVRCAKRRG 176 Query: 127 DGTISSNATHVEHPLCPPKPGFVRGFNHPCGCFCEPLPGEPTKTNLVTFFHTDLSGYLPQ 186 + + + P + G +R + P PL G P+KT L DL G+LP+ Sbjct: 177 STCVLAGMA-TDFGNMPEQKGVIRAEHGPTCMVLHPLAGSPSKTKLTWLLSIDLKGWLPK 235 Query: 187 NVVDSFFPRSMTRFYANLQKAVK 209 ++++ ++ F +L+K ++ Sbjct: 236 SIINQVLSQTQVDFANHLRKRLE 258 >gi|4504383 HGF activator preproprotein [Homo sapiens] Length = 655 Score = 30.0 bits (66), Expect = 1.5 Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 2/71 (2%) Query: 86 FEIIQSITDTLCVSRTSTPSAAMKLISPRDFVDLVLVKRYEDGTISSNATHVEHPLCPPK 145 F +T T + + P + +P D DLVL++ + G + + P+C P+ Sbjct: 467 FNRTTDVTQTFGIEKY-IPYTLYSVFNPSDH-DLVLIRLKKKGDRCATRSQFVQPICLPE 524 Query: 146 PGFVRGFNHPC 156 PG H C Sbjct: 525 PGSTFPAGHKC 535 >gi|151301035 START domain containing 7 [Homo sapiens] Length = 370 Score = 28.9 bits (63), Expect = 3.4 Identities = 25/79 (31%), Positives = 32/79 (40%), Gaps = 8/79 (10%) Query: 76 RVKWDENVTGFEIIQSITDTLCVSRTSTPSAAMKLISPRDFVDLVLVKRY----EDGTIS 131 R KWD V E+I+ VS + P D V V+RY E+ + Sbjct: 189 RKKWDALVIKLEVIERDV----VSGSEVLHWVTHFPYPMYSRDYVYVRRYSVDQENNMMV 244 Query: 132 SNATHVEHPLCPPKPGFVR 150 + VEHP P P FVR Sbjct: 245 LVSRAVEHPSVPESPEFVR 263 >gi|116268101 leucine rich repeat containing 62 [Homo sapiens] Length = 820 Score = 28.1 bits (61), Expect = 5.8 Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 4/73 (5%) Query: 116 FVDLVLVK-RYEDGTISSNATHVEHPLCPPKPGFVRGFNHPCGCFC--EPLPGE-PTKTN 171 F D++ +K + E T+ H E+ C R FNH C F +P+PG+ T+ Sbjct: 333 FSDVMTLKNKKEIVTLDKLRAHTEYTFCVTSLRNSRRFNHTCLTFTTRDPVPGDLAPSTS 392 Query: 172 LVTFFHTDLSGYL 184 T + + G L Sbjct: 393 TTTHYIMTILGCL 405 >gi|7019569 vacuolar protein sorting factor 4A [Homo sapiens] Length = 437 Score = 27.3 bits (59), Expect = 9.9 Identities = 15/44 (34%), Positives = 21/44 (47%) Query: 94 DTLCVSRTSTPSAAMKLISPRDFVDLVLVKRYEDGTISSNATHV 137 D+LC SR S A + I V + V DGT+ AT++ Sbjct: 230 DSLCGSRNENESEAARRIKTEFLVQMQGVGNNNDGTLVLGATNI 273 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.321 0.137 0.438 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 9,146,652 Number of Sequences: 37866 Number of extensions: 433239 Number of successful extensions: 819 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 806 Number of HSP's gapped (non-prelim): 10 length of query: 213 length of database: 18,247,518 effective HSP length: 98 effective length of query: 115 effective length of database: 14,536,650 effective search space: 1671714750 effective search space used: 1671714750 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.