Search of human proteins with 32490561

Search of human proteins with 32490561

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|32490561 solute carrier family 39 (zinc transporter), member
3 isoform a [Homo sapiens]
         (314 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|32490561 solute carrier family 39 (zinc transporter), member ...   601   e-172
gi|21361423 solute carrier family 39 (zinc transporter), member ...   173   2e-43
gi|47080103 solute carrier family 39 (zinc transporter), member ...   141   9e-34
gi|156415986 solute carrier family 39 (zinc transporter), member...   122   3e-28
gi|40255101 solute carrier family 39 (zinc transporter), member ...    41   0.002
gi|190014617 solute carrier family 39 (zinc transporter), member...    39   0.008
gi|205830426 solute carrier family 39 (zinc transporter), member...    32   0.73 
gi|40217823 SLIT and NTRK-like family, member 5 [Homo sapiens]         32   0.96 
gi|31340735 zinc finger protein 445 [Homo sapiens]                     31   1.6  
gi|20336248 proprotein convertase subtilisin/kexin type 7 prepro...    30   2.1  
gi|126352608 elastin isoform e precursor [Homo sapiens]                30   2.8  
gi|126352446 elastin isoform d precursor [Homo sapiens]                30   2.8  
gi|126352322 elastin isoform c precursor [Homo sapiens]                30   2.8  
gi|126352700 elastin isoform b precursor [Homo sapiens]                30   2.8  
gi|126352440 elastin isoform a precursor [Homo sapiens]                30   2.8  
gi|9507221 ubiquitin associated and SH3 domain containing, A lon...    30   2.8  
gi|21359951 RNA binding motif protein 42 [Homo sapiens]                30   3.6  
gi|40254928 solute carrier family 39 (zinc transporter), member ...    29   4.7  
gi|118200356 growth hormone inducible transmembrane protein [Hom...    28   8.1  

>gi|32490561 solute carrier family 39 (zinc transporter), member 3
           isoform a [Homo sapiens]
          Length = 314

 Score =  601 bits (1550), Expect = e-172
 Identities = 314/314 (100%), Positives = 314/314 (100%)

Query: 1   MVKLLVAKILCMVGVFFFMLLGSLLPVKIIETDFEKAHRSKKILSLCNTFGGGVFLATCF 60
           MVKLLVAKILCMVGVFFFMLLGSLLPVKIIETDFEKAHRSKKILSLCNTFGGGVFLATCF
Sbjct: 1   MVKLLVAKILCMVGVFFFMLLGSLLPVKIIETDFEKAHRSKKILSLCNTFGGGVFLATCF 60

Query: 61  NALLPAVREKLQKVLSLGHISTDYPLAETILLLGFFMTVFLEQLILTFRKEKPSFIDLET 120
           NALLPAVREKLQKVLSLGHISTDYPLAETILLLGFFMTVFLEQLILTFRKEKPSFIDLET
Sbjct: 61  NALLPAVREKLQKVLSLGHISTDYPLAETILLLGFFMTVFLEQLILTFRKEKPSFIDLET 120

Query: 121 FNAGSDVGSDSEYESPFMGGARGHALYVEPHGHGPSLSVQGLSRASPVRLLSLAFALSAH 180
           FNAGSDVGSDSEYESPFMGGARGHALYVEPHGHGPSLSVQGLSRASPVRLLSLAFALSAH
Sbjct: 121 FNAGSDVGSDSEYESPFMGGARGHALYVEPHGHGPSLSVQGLSRASPVRLLSLAFALSAH 180

Query: 181 SVFEGLALGLQEEGEKVVSLFVGVAVHETLVAVALGISMARSAMPLRDAAKLAVTVSAMI 240
           SVFEGLALGLQEEGEKVVSLFVGVAVHETLVAVALGISMARSAMPLRDAAKLAVTVSAMI
Sbjct: 181 SVFEGLALGLQEEGEKVVSLFVGVAVHETLVAVALGISMARSAMPLRDAAKLAVTVSAMI 240

Query: 241 PLGIGLGLGIESAQGVPGSVASVLLQGLAGGTFLFITFLEILAKELEEKSDRLLKVLFLV 300
           PLGIGLGLGIESAQGVPGSVASVLLQGLAGGTFLFITFLEILAKELEEKSDRLLKVLFLV
Sbjct: 241 PLGIGLGLGIESAQGVPGSVASVLLQGLAGGTFLFITFLEILAKELEEKSDRLLKVLFLV 300

Query: 301 LGYTVLAGMVFLKW 314
           LGYTVLAGMVFLKW
Sbjct: 301 LGYTVLAGMVFLKW 314


>gi|21361423 solute carrier family 39 (zinc transporter), member 1
           [Homo sapiens]
          Length = 324

 Score =  173 bits (438), Expect = 2e-43
 Identities = 106/315 (33%), Positives = 173/315 (54%), Gaps = 24/315 (7%)

Query: 5   LVAKILCMVGVFFFMLLGSLLPVKIIE---TDFEKAHRSKKILSLCNTFGGGVFLATCFN 61
           L  K+  +V +    LL SL+P+ ++     + E +   +K LSL + F GGVFLATC  
Sbjct: 27  LEVKLGALVLLLVLTLLCSLVPICVLRRPGANHEGSASRQKALSLVSCFAGGVFLATCLL 86

Query: 62  ALLPAVREKLQKVLSLGHISTDYPLAETILLLGFFMTVFLEQLILTFRKEKPSFIDLETF 121
            LLP     + + L+  H++  +PL E IL +GFF+ + +EQ+ L ++++          
Sbjct: 87  DLLPDYLAAIDEALAALHVTLQFPLQEFILAMGFFLVLVMEQITLAYKEQSGP------- 139

Query: 122 NAGSDVGSDSEYESPFMGGARGHALYVEPHGH-GPSLSVQGLSRASP--VRLLSLAFALS 178
                  S  E     +G   G       H H GP +     + A+P  +R   L F+L+
Sbjct: 140 -------SPLEETRALLGTVNGGP----QHWHDGPGVPQASGAPATPSALRACVLVFSLA 188

Query: 179 AHSVFEGLALGLQEEGEKVVSLFVGVAVHETLVAVALGISMARSAMPLRDAAKLAVTVSA 238
            HSVFEGLA+GLQ +  + + L + + +H+ ++AV+L + + +S +  +  A   +  S 
Sbjct: 189 LHSVFEGLAVGLQRDRARAMELCLALLLHKGILAVSLSLRLLQSHLRAQVVAGCGILFSC 248

Query: 239 MIPLGIGLGLGIESAQGVPGSVASVLLQGLAGGTFLFITFLEILAKELEEKSDRLLKVLF 298
           M PLGIGLG  +  + G    +A  +L+G+A GTFL+ITFLEIL +EL     R+LKV+ 
Sbjct: 249 MTPLGIGLGAALAESAGPLHQLAQSVLEGMAAGTFLYITFLEILPQELASSEQRILKVIL 308

Query: 299 LVLGYTVLAGMVFLK 313
           L+ G+ +L G++F++
Sbjct: 309 LLAGFALLTGLLFIQ 323


>gi|47080103 solute carrier family 39 (zinc transporter), member 3
          isoform b [Homo sapiens]
          Length = 105

 Score =  141 bits (355), Expect = 9e-34
 Identities = 70/72 (97%), Positives = 72/72 (100%)

Query: 1  MVKLLVAKILCMVGVFFFMLLGSLLPVKIIETDFEKAHRSKKILSLCNTFGGGVFLATCF 60
          MVKLLVAKILCMVGVFFFMLLGSLLPVKIIETDFEKAHRSKKILSLCNTFGGGVFLATCF
Sbjct: 1  MVKLLVAKILCMVGVFFFMLLGSLLPVKIIETDFEKAHRSKKILSLCNTFGGGVFLATCF 60

Query: 61 NALLPAVREKLQ 72
          NALLPAVREK++
Sbjct: 61 NALLPAVREKVR 72


>gi|156415986 solute carrier family 39 (zinc transporter), member 2
           [Homo sapiens]
          Length = 309

 Score =  122 bits (307), Expect = 3e-28
 Identities = 101/327 (30%), Positives = 145/327 (44%), Gaps = 44/327 (13%)

Query: 1   MVKLLVAKILCMVGVFFFMLLGSLLPV--KIIETDFEKAHRSKKILSLCNTFGGGVFLAT 58
           M +LL  K+ C+  +    L   L P+  K  + D  + H  + +L L      GVFL  
Sbjct: 1   MEQLLGIKLGCLFALLALTLGCGLTPICFKWFQIDAARGHH-RLVLRLLGCISAGVFLGA 59

Query: 59  CFNAL----LPAVREKLQKVLSLGHISTD-------------YPLAETILLLGFFMTVFL 101
            F  +    L  +  ++QK +     +++             YP  E I+ LGFF   FL
Sbjct: 60  GFMHMTAEALEEIESQIQKFMVQNRSASERNSSGDADSAHMEYPYGELIISLGFFFVFFL 119

Query: 102 EQLILTFRKEKPSFIDLETFNAGSDVGSDSEYESPFMGGARGHALYVEPHGHGPSLSVQG 161
           E L L                AG     D E+     GGA  H   +  HGH PS S   
Sbjct: 120 ESLALQCCPGA----------AGGSTVQDEEW-----GGA--HIFELHSHGHLPSPS--- 159

Query: 162 LSRASPVRLLSLAFALSAHSVFEGLALGLQEEGEKVVSLFVGVAVHETLVAVALGISMAR 221
                P+R L L  +LS HSVFEGLA+GLQ      V L + V  H+ LV   +G+ +  
Sbjct: 160 ---KGPLRALVLLLSLSFHSVFEGLAVGLQPTVAATVQLCLAVLAHKGLVVFGVGMRLVH 216

Query: 222 SAMPLRDAAKLAVTVSAMIPLGIGLGLGIESAQGVPG-SVASVLLQGLAGGTFLFITFLE 280
                R A    + ++ M PLG+ +GL +       G  +A  +L+G+A GTFL++TFLE
Sbjct: 217 LGTSSRWAVFSILLLALMSPLGLAVGLAVTGGDSEGGRGLAQAVLEGVAAGTFLYVTFLE 276

Query: 281 ILAKELEEKSDRLLKVLFLVLGYTVLA 307
           IL +EL      L K   +  G+  +A
Sbjct: 277 ILPRELASPEAPLAKWSCVAAGFAFMA 303


>gi|40255101 solute carrier family 39 (zinc transporter), member 13
           isoform b [Homo sapiens]
          Length = 364

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 52/206 (25%), Positives = 82/206 (39%), Gaps = 12/206 (5%)

Query: 105 ILTFRKEKPSFIDLETFNAGSDVGSDSEYESPFMGGARGHALYVEPHGHGPSLSVQGLSR 164
           ILTF   +  F+D +          D    +  + G  GH L       G    V+ +  
Sbjct: 159 ILTFLALEKMFLDSKEEGTSQAPNKDPTAAAAALNG--GHCLAQPAAEPGLGAVVRSIKV 216

Query: 165 ASPVRLLSLAFALSAHSVFEGLALGLQEEGEKVVSLFVGVAV--HETLVAVALGISMARS 222
           +  + LL+       H    GLA+       K + L   +A+  HE    V     + R+
Sbjct: 217 SGYLNLLANTIDNFTH----GLAVAASFLVSKKIGLLTTMAILLHEIPHEVGDFAILLRA 272

Query: 223 AMPLRDAAKLAVTVSAMIPLGIGLGLGIESAQGVPGSVASVLLQGLAGGTFLFITFLEIL 282
                 AAKL ++ +    LG G  +  +S +GV  + A VL      G FL+I  + +L
Sbjct: 273 GFDRWSAAKLQLSTALGGLLGAGFAICTQSPKGVEETAAWVL--PFTSGGFLYIALVNVL 330

Query: 283 AKELEEKSD--RLLKVLFLVLGYTVL 306
              LEE+     L ++L L  G  V+
Sbjct: 331 PDLLEEEDPWRSLQQLLLLCAGIVVM 356


>gi|190014617 solute carrier family 39 (zinc transporter), member 13
           isoform a [Homo sapiens]
          Length = 371

 Score = 38.5 bits (88), Expect = 0.008
 Identities = 53/212 (25%), Positives = 85/212 (40%), Gaps = 17/212 (8%)

Query: 105 ILTFRKEKPSFIDLETFNAGSDVGSDSEYESPFMGGARGHALYVEPHGHGPSLSVQGLSR 164
           ILTF   +  F+D +          D    +  + G  GH L       G    V+ +  
Sbjct: 159 ILTFLALEKMFLDSKEEGTSQAPNKDPTAAAAALNG--GHCLAQPAAEPGLGAVVRSIKV 216

Query: 165 ASPVRLLSLAFALSAHSVFEGLALGLQEEGEKVVSLFVGVAV--HETLVAVALGISMARS 222
           +  + LL+       H    GLA+       K + L   +A+  HE    V     + R+
Sbjct: 217 SGYLNLLANTIDNFTH----GLAVAASFLVSKKIGLLTTMAILLHEIPHEVGDFAILLRA 272

Query: 223 AMPLRDAAKLAVTVSAMIPLGIGLGLGIESAQGVPG------SVASVLLQGLAGGTFLFI 276
                 AAKL ++ +    LG G  +  +S +GV G        A+ +L   +GG FL+I
Sbjct: 273 GFDRWSAAKLQLSTALGGLLGAGFAICTQSPKGVVGCSPAAEETAAWVLPFTSGG-FLYI 331

Query: 277 TFLEILAKELEEKSD--RLLKVLFLVLGYTVL 306
             + +L   LEE+     L ++L L  G  V+
Sbjct: 332 ALVNVLPDLLEEEDPWRSLQQLLLLCAGIVVM 363


>gi|205830426 solute carrier family 39 (zinc transporter), member 14
           isoform c [Homo sapiens]
          Length = 481

 Score = 32.0 bits (71), Expect = 0.73
 Identities = 62/294 (21%), Positives = 108/294 (36%), Gaps = 65/294 (22%)

Query: 43  ILSLCNTFGGGV---------------FLATCFNALLP-AVREKLQKVLSLGHISTDYPL 86
           ++SLC+  G  V               F+A     L   A+ + + +      +   Y  
Sbjct: 163 VISLCSLLGASVVPFMKKTFYKRLLLYFIALAIGTLYSNALFQLIPEAFGFNPLEDYYVS 222

Query: 87  AETILLLGFFMTVFLEQLILTFRKEKPSFIDLETFNAGSDVGSDSEYESPFM----GGAR 142
              ++  GF++  F E+++    K+K       +  A   + S  + E   M     G  
Sbjct: 223 KSAVVFGGFYLFFFTEKILKILLKQKNEHHHGHSHYASESLPSKKDQEEGVMEKLQNGDL 282

Query: 143 GHAL----YVEPHGHGP---------SLSVQGLS------------RASPVRLLSLAFAL 177
            H +      E  G  P         SLSVQ L             R S +  L+    L
Sbjct: 283 DHMIPQHCSSELDGKAPMVDEKVIVGSLSVQDLQASQSACYWLKGVRYSDIGTLAWMITL 342

Query: 178 S--AHSVFEGLALGLQEEGEKVVSLFVGVAVHETLVAVA----LG--ISMARSAMPLRDA 229
           S   H+  +GLA+G        VS+F G++    ++       LG  + +  + M ++ A
Sbjct: 343 SDGLHNFIDGLAIG----ASFTVSVFQGISTSVAILCEEFPHELGDFVILLNAGMSIQQA 398

Query: 230 AKLAVTVSAMIPLGIGLGLGIESAQGVPGSVASV-LLQGLAGGTFLFITFLEIL 282
                  +    LG+  G+       + GS  S   +  LAGG FL+I+  +++
Sbjct: 399 LFFNFLSACCCYLGLAFGI-------LAGSHFSANWIFALAGGMFLYISLADMM 445


>gi|40217823 SLIT and NTRK-like family, member 5 [Homo sapiens]
          Length = 958

 Score = 31.6 bits (70), Expect = 0.96
 Identities = 43/149 (28%), Positives = 62/149 (41%), Gaps = 22/149 (14%)

Query: 26  PVKIIETDFEKAHRSKKILSLCNTFG---------GGVFLATCFNALLPAVREKLQKV-- 74
           P K  ETD     RS K   LC  +            + +    +A+ PAVR        
Sbjct: 595 PKKFAETDM----RSIKSELLCPDYSDVVVSTPTPSSIQVPARTSAVTPAVRLNSTGAPA 650

Query: 75  -LSLGHISTDYPLAETIL--LLGFFMTVFLEQ--LILTFRKEKPSFIDLETFNAGSDVGS 129
            L  G  ++  PL+  IL  LL F M+VF+     +L  ++ K +  D  + N  SDV S
Sbjct: 651 SLGAGGGASSVPLSVLILSLLLVFIMSVFVAAGLFVLVMKRRKKNQSDHTSTN-NSDVSS 709

Query: 130 -DSEYESPFMGGARGHALYVEPHGHGPSL 157
            + +Y     GG  G   +   H  GP+L
Sbjct: 710 FNMQYSVYGGGGGTGGHPHAHVHHRGPAL 738


>gi|31340735 zinc finger protein 445 [Homo sapiens]
          Length = 1031

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 8/67 (11%)

Query: 98  TVFLEQLILTFRKEKPSFIDLETFNAG------SDVGSDSEYESPFMGGARGHALYVEPH 151
           T   +Q   TF ++K + +D +  + G      SD G D  Y S F+   + HA+  +P 
Sbjct: 680 TFLCQQCGKTFTRKK-TLVDHQRIHTGEKPYQCSDCGKDFAYRSAFIVHKKKHAMKRKPE 738

Query: 152 GHGPSLS 158
           G GPS S
Sbjct: 739 G-GPSFS 744


>gi|20336248 proprotein convertase subtilisin/kexin type 7
           preproprotein [Homo sapiens]
          Length = 785

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 11/25 (44%), Positives = 18/25 (72%)

Query: 138 MGGARGHALYVEPHGHGPSLSVQGL 162
           +G  +GH L+V+P GH P+L V+ +
Sbjct: 89  IGELQGHYLFVQPAGHRPALEVEAI 113


>gi|126352608 elastin isoform e precursor [Homo sapiens]
          Length = 705

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 1/62 (1%)

Query: 211 VAVALGISMARSAMPLRDAAKLAVTVSAMIPLGIGLGL-GIESAQGVPGSVASVLLQGLA 269
           V VA GI     A   + AAK+A         G+G G+ G+    GVPG      + GL 
Sbjct: 494 VGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLG 553

Query: 270 GG 271
            G
Sbjct: 554 VG 555


>gi|126352446 elastin isoform d precursor [Homo sapiens]
          Length = 711

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 1/62 (1%)

Query: 211 VAVALGISMARSAMPLRDAAKLAVTVSAMIPLGIGLGL-GIESAQGVPGSVASVLLQGLA 269
           V VA GI     A   + AAK+A         G+G G+ G+    GVPG      + GL 
Sbjct: 518 VGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLG 577

Query: 270 GG 271
            G
Sbjct: 578 VG 579


>gi|126352322 elastin isoform c precursor [Homo sapiens]
          Length = 692

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 1/62 (1%)

Query: 211 VAVALGISMARSAMPLRDAAKLAVTVSAMIPLGIGLGL-GIESAQGVPGSVASVLLQGLA 269
           V VA GI     A   + AAK+A         G+G G+ G+    GVPG      + GL 
Sbjct: 499 VGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLG 558

Query: 270 GG 271
            G
Sbjct: 559 VG 560


>gi|126352700 elastin isoform b precursor [Homo sapiens]
          Length = 677

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 1/62 (1%)

Query: 211 VAVALGISMARSAMPLRDAAKLAVTVSAMIPLGIGLGL-GIESAQGVPGSVASVLLQGLA 269
           V VA GI     A   + AAK+A         G+G G+ G+    GVPG      + GL 
Sbjct: 484 VGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLG 543

Query: 270 GG 271
            G
Sbjct: 544 VG 545


>gi|126352440 elastin isoform a precursor [Homo sapiens]
          Length = 724

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 1/62 (1%)

Query: 211 VAVALGISMARSAMPLRDAAKLAVTVSAMIPLGIGLGL-GIESAQGVPGSVASVLLQGLA 269
           V VA GI     A   + AAK+A         G+G G+ G+    GVPG      + GL 
Sbjct: 513 VGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLG 572

Query: 270 GG 271
            G
Sbjct: 573 VG 574


>gi|9507221 ubiquitin associated and SH3 domain containing, A long
           form [Homo sapiens]
          Length = 661

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 37/135 (27%), Positives = 59/135 (43%), Gaps = 28/135 (20%)

Query: 36  KAHRSKKILSLCNTFGGGVFLATCFNALLPAVREKLQKVLS--LGHISTDYPLA--ETIL 91
           +AH     ++LC+ F       TC +  +  + E L++     LG   T  PLA   +I 
Sbjct: 103 RAHEVFPHVTLCDFF-------TCEDQKVECLYEALKRAGDRLLGSFPTAVPLALHSSIS 155

Query: 92  LLGFFMTVFLEQLILTFRKEKPSFIDLETFNAGSDVGSDSEYESPFMGGARGHALYVEPH 151
            LGFF++     +I  F     +F    +  AG+ V       S F        ++ +  
Sbjct: 156 YLGFFVSGSPADVIREFAM---TFATEASLLAGTSV-------SRFW-------IFSQVP 198

Query: 152 GHGPSLSVQGLSRAS 166
           GHGP+L +  L+RAS
Sbjct: 199 GHGPNLRLSNLTRAS 213


>gi|21359951 RNA binding motif protein 42 [Homo sapiens]
          Length = 480

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 31/118 (26%), Positives = 47/118 (39%), Gaps = 9/118 (7%)

Query: 136 PFMGGARGHALYVEPHGHGPSLSVQGLSRASPVRLLSLAFALSAHSVFEGLALGLQEEGE 195
           P + G  G  + + P    P   +  ++   P     L    +   +  GL LGL+E+ E
Sbjct: 195 PPLPGPPGPPMMLPPMARAPGPPLGSMAALRP----PLEEPAAPRELGLGLGLGLKEKEE 250

Query: 196 KVVSLFVGVAVHETLVAVALGISMARSA-----MPLRDAAKLAVTVSAMIPLGIGLGL 248
            VV+   G+      VAV  G + A  A     +PL  A  L       +PL +  GL
Sbjct: 251 AVVAAAAGLEEASAAVAVGAGGAPAGPAVIGPSLPLALAMPLPEPEPLPLPLEVVRGL 308


>gi|40254928 solute carrier family 39 (zinc transporter), member 9
           [Homo sapiens]
          Length = 307

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 26/121 (21%), Positives = 51/121 (42%), Gaps = 12/121 (9%)

Query: 171 LSLAFALSAHSVFEGLALGLQEEGEKV---VSLFVGVAVHETLVAVALGISMARSAMPLR 227
           ++    L  H+  +G+ALG      +    + +FV + +H+   A  L   +  + +   
Sbjct: 146 ITTTLGLVVHAAADGVALGAAASTSQTSVQLIVFVAIMLHKAPAAFGLVSFLMHAGLERN 205

Query: 228 DAAK------LAVTVSAMIPLGIGLGLGIESAQGVPGSVASVLLQGLAGGTFLFITFLEI 281
              K      LA  V +M+     LGL   S + +    A+ +    + GTFL++  + +
Sbjct: 206 RIRKHLLVFALAAPVMSMVTY---LGLSKSSKEALSEVNATGVAMLFSAGTFLYVATVHV 262

Query: 282 L 282
           L
Sbjct: 263 L 263


>gi|118200356 growth hormone inducible transmembrane protein [Homo
           sapiens]
          Length = 345

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 6/45 (13%)

Query: 241 PLGIGLGLGIESAQG----VPGSVASVLLQGLA--GGTFLFITFL 279
           PLG+GLGL   S+ G     P +VA   L  +A  GG  LF  FL
Sbjct: 247 PLGVGLGLVFVSSLGSMFLPPTTVAGATLYSVAMYGGLVLFSMFL 291


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.325    0.141    0.400 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,492,375
Number of Sequences: 37866
Number of extensions: 440391
Number of successful extensions: 1594
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1569
Number of HSP's gapped (non-prelim): 35
length of query: 314
length of database: 18,247,518
effective HSP length: 102
effective length of query: 212
effective length of database: 14,385,186
effective search space: 3049659432
effective search space used: 3049659432
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.