Guide to the Human Genome
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Name: PFAS Sequence: fasta or formatted (1338aa) NCBI GI: 31657129
Description:

phosphoribosylformylglycinamidine synthase

Referenced in:

Purine Biosynthesis and Catabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.4        126           3
 C cysteine            2.2         29           1
 D aspartate           4.9         65           3
 E glutamate           6.8         91           3
 F phenylalanine       3.6         48           2
 G glycine             9.9        132           3
 H histidine           2.6         35           1
 I isoleucine          2.3         31           2
 K lysine              2.5         33           2
 L leucine            11.1        148           3
 M methionine          1.9         25           1
 N asparagine          3.3         44           2
 P proline             7.9        106           3
 Q glutamine           4.0         53           4
 R arginine            6.5         87           2
 S serine              6.0         80           2
 T threonine           4.3         57           2
 V valine              7.8        105           2
 W tryptophan          1.7         23           1
 Y tyrosine            1.5         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phosphoribosylformylglycinamidine synthase 
ZNF641                0.005   zinc finger protein 641 
KHSRP                 0.004   KH-type splicing regulatory protein 
COL1A2                0.003   alpha 2 type I collagen 
ZNF205                0.003   zinc finger protein 205 
ZNF205                0.003   zinc finger protein 205 
ZKSCAN2               0.003   zinc finger with KRAB and SCAN domains 2 
F8A1                  0.003   coagulation factor VIII-associated protein 
F8A3                  0.003   coagulation factor VIII-associated (intronic transcr...
F8A2                  0.003   coagulation factor VIII-associated (intronic transcr...
DMD                   0.003   dystrophin Dp427c isoform 
DMD                   0.003   dystrophin Dp260-2 isoform 
DMD                   0.003   dystrophin Dp260-1 isoform 
DMD                   0.003   dystrophin Dp427p2 isoform 
DMD                   0.003   dystrophin Dp427p1 isoform 
LOC100127919          0.003   PREDICTED: similar to stella 
LOC100127919          0.003   PREDICTED: similar to stella 
LOC100127919          0.003   PREDICTED: similar to developmental pluripotency-as...
DMD                   0.003   dystrophin Dp427l isoform 
DMD                   0.003   dystrophin Dp427m isoform 
ZNF219                0.003   zinc finger protein 219 
ZNF219                0.003   zinc finger protein 219 
ZNF219                0.003   zinc finger protein 219 
PELP1                 0.003   proline, glutamic acid and leucine rich protein 1 [...
ZSCAN29               0.003   zinc finger protein 690 
LRRC58                0.002   leucine rich repeat containing 58 
ESPL1                 0.002   separase 
ZNF202                0.002   zinc finger protein 202 
ARHGEF17              0.002   Rho guanine nucleotide exchange factor (GEF) 17 [Hom...
DENND1A               0.002   DENN/MADD domain containing 1A isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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