Search of human proteins with 31542743

Search of human proteins with 31542743

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|31542743 EF-hand domain (C-terminal) containing 2 [Homo
sapiens]
         (749 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|31542743 EF-hand domain (C-terminal) containing 2 [Homo sapiens]  1549   0.0  
gi|156616292 EF-hand domain (C-terminal) containing 1 [Homo sapi...   359   5e-99
gi|148613876 EF hand domain family, member B [Homo sapiens]            46   1e-04
gi|7705383 calpain 9 isoform 2 [Homo sapiens]                          36   0.15 
gi|5729758 calpain 9 isoform 1 [Homo sapiens]                          36   0.15 
gi|87298937 centrosomal protein 110kDa [Homo sapiens]                  33   1.3  
gi|25901062 hypothetical protein LOC56261 [Homo sapiens]               32   2.2  
gi|148886654 polydom [Homo sapiens]                                    32   2.2  
gi|22748811 hypothetical protein LOC127795 [Homo sapiens]              31   3.7  
gi|109255234 centrosomal protein 290kDa [Homo sapiens]                 31   4.8  
gi|40807471 transcription termination factor, RNA polymerase II ...    31   4.8  
gi|11545811 hepatocellular carcinoma antigen gene 520 [Homo sapi...    31   4.8  
gi|189181720 proteoglycan 4 isoform B [Homo sapiens]                   30   6.3  
gi|67190163 proteoglycan 4 isoform A [Homo sapiens]                    30   6.3  
gi|38570109 CAP-binding protein complex interacting protein 1 is...    30   8.2  
gi|38570107 CAP-binding protein complex interacting protein 1 is...    30   8.2  
gi|4557777 slow skeletal ventricular myosin alkali light chain 3...    30   8.2  
gi|17986258 myosin, light chain 6, alkali, smooth muscle and non...    30   8.2  

>gi|31542743 EF-hand domain (C-terminal) containing 2 [Homo sapiens]
          Length = 749

 Score = 1549 bits (4010), Expect = 0.0
 Identities = 749/749 (100%), Positives = 749/749 (100%)

Query: 1   MALPLLPGNSFNRNVGKEKFHKSQHWGFCNNVMMLVSDEKPGIGGEPLLGQKIKPKCSIY 60
           MALPLLPGNSFNRNVGKEKFHKSQHWGFCNNVMMLVSDEKPGIGGEPLLGQKIKPKCSIY
Sbjct: 1   MALPLLPGNSFNRNVGKEKFHKSQHWGFCNNVMMLVSDEKPGIGGEPLLGQKIKPKCSIY 60

Query: 61  PKGDGSDVPSWVAFDKQVLSFDAYLEEEVLDKSQTNYRIRYYKIYFYPEDDTIQVNEPEV 120
           PKGDGSDVPSWVAFDKQVLSFDAYLEEEVLDKSQTNYRIRYYKIYFYPEDDTIQVNEPEV
Sbjct: 61  PKGDGSDVPSWVAFDKQVLSFDAYLEEEVLDKSQTNYRIRYYKIYFYPEDDTIQVNEPEV 120

Query: 121 KNSGLLQGTSIRRHRITLPPPDEDQFYTVYHFNVGTEVVFYGRTFKIYDCDAFTRNFLRK 180
           KNSGLLQGTSIRRHRITLPPPDEDQFYTVYHFNVGTEVVFYGRTFKIYDCDAFTRNFLRK
Sbjct: 121 KNSGLLQGTSIRRHRITLPPPDEDQFYTVYHFNVGTEVVFYGRTFKIYDCDAFTRNFLRK 180

Query: 181 IGVKVNPPVQCPEDPYMKIRREVVEHVEPLRPYESLDTLKQFLQYHGKILCFFCLWDDSV 240
           IGVKVNPPVQCPEDPYMKIRREVVEHVEPLRPYESLDTLKQFLQYHGKILCFFCLWDDSV
Sbjct: 181 IGVKVNPPVQCPEDPYMKIRREVVEHVEPLRPYESLDTLKQFLQYHGKILCFFCLWDDSV 240

Query: 241 SMFGDRRELILHYFLCDDTIEIKELLPHSSGRDALKMFLRRSKLPKNCPPRVYQPGQITD 300
           SMFGDRRELILHYFLCDDTIEIKELLPHSSGRDALKMFLRRSKLPKNCPPRVYQPGQITD
Sbjct: 241 SMFGDRRELILHYFLCDDTIEIKELLPHSSGRDALKMFLRRSKLPKNCPPRVYQPGQITD 300

Query: 301 RAVLNSYGDFIKNQADGYLFDRYKLGKVDQEFYKDSDLSLGVTINVWGRKVLLYDCDEFT 360
           RAVLNSYGDFIKNQADGYLFDRYKLGKVDQEFYKDSDLSLGVTINVWGRKVLLYDCDEFT
Sbjct: 301 RAVLNSYGDFIKNQADGYLFDRYKLGKVDQEFYKDSDLSLGVTINVWGRKVLLYDCDEFT 360

Query: 361 KSYYKSKYGIENFTSVSCKPPSPPPKIERKFPPYNGFGSEEDSLRNCIDLKPTPHRRNFK 420
           KSYYKSKYGIENFTSVSCKPPSPPPKIERKFPPYNGFGSEEDSLRNCIDLKPTPHRRNFK
Sbjct: 361 KSYYKSKYGIENFTSVSCKPPSPPPKIERKFPPYNGFGSEEDSLRNCIDLKPTPHRRNFK 420

Query: 421 KFMEKDSYGSKSNILRFFAKLVTDKCVDLDRMFVISYYLGDDTISVFEPIERNSGIAGGM 480
           KFMEKDSYGSKSNILRFFAKLVTDKCVDLDRMFVISYYLGDDTISVFEPIERNSGIAGGM
Sbjct: 421 KFMEKDSYGSKSNILRFFAKLVTDKCVDLDRMFVISYYLGDDTISVFEPIERNSGIAGGM 480

Query: 481 FLKRSRVKKPGQEVFKSELSEYIKAEELYIGVTVNVNGYLFRLLNADEYTLNYMEQNTDK 540
           FLKRSRVKKPGQEVFKSELSEYIKAEELYIGVTVNVNGYLFRLLNADEYTLNYMEQNTDK
Sbjct: 481 FLKRSRVKKPGQEVFKSELSEYIKAEELYIGVTVNVNGYLFRLLNADEYTLNYMEQNTDK 540

Query: 541 YPFSNLKLALQKLKQEEGKSRELKQVFKAADSKHTNMVDYNTFRDILMSLTVGNLAEQEF 600
           YPFSNLKLALQKLKQEEGKSRELKQVFKAADSKHTNMVDYNTFRDILMSLTVGNLAEQEF
Sbjct: 541 YPFSNLKLALQKLKQEEGKSRELKQVFKAADSKHTNMVDYNTFRDILMSLTVGNLAEQEF 600

Query: 601 VTIARHYRVPEGTCSDMDFLIALAHEKFKKNMFENFDTFIYSCVYEDREKKNVLPTKDIK 660
           VTIARHYRVPEGTCSDMDFLIALAHEKFKKNMFENFDTFIYSCVYEDREKKNVLPTKDIK
Sbjct: 601 VTIARHYRVPEGTCSDMDFLIALAHEKFKKNMFENFDTFIYSCVYEDREKKNVLPTKDIK 660

Query: 661 RLCKSSRLPLSDDLLESLLSRFEDSEKQIDYKSFFSALNWRKNPVPELQPASYLKERCED 720
           RLCKSSRLPLSDDLLESLLSRFEDSEKQIDYKSFFSALNWRKNPVPELQPASYLKERCED
Sbjct: 661 RLCKSSRLPLSDDLLESLLSRFEDSEKQIDYKSFFSALNWRKNPVPELQPASYLKERCED 720

Query: 721 VWLGMPSPIPAKYIDYWTFLKDAFGLEEE 749
           VWLGMPSPIPAKYIDYWTFLKDAFGLEEE
Sbjct: 721 VWLGMPSPIPAKYIDYWTFLKDAFGLEEE 749


>gi|156616292 EF-hand domain (C-terminal) containing 1 [Homo
           sapiens]
          Length = 640

 Score =  359 bits (922), Expect = 5e-99
 Identities = 238/721 (33%), Positives = 357/721 (49%), Gaps = 114/721 (15%)

Query: 3   LPLLPGNSFNRNVGKEKFHKSQHWGFCNNVMMLVSDEKPGIGGEPL----LGQ----KIK 54
           LP LPG SF  +  K  FH+SQ   + N    +V     GIGG+ L    L Q    ++ 
Sbjct: 9   LPFLPGTSFKDST-KTAFHRSQTLSYRNGYA-IVRRPTVGIGGDRLQFNQLSQAELDELA 66

Query: 55  PKCSIYPKGDGSD------VPSWVAFDKQVLSFDAYLEEEVLDKSQTNYRIRYYKIYFYP 108
            K  +   G          +P+ VAFDK+VL FDAY +E+V   ++  YRIR   IY+Y 
Sbjct: 67  SKAPVLTYGQPKQAPPADFIPAHVAFDKKVLKFDAYFQEDVPMSTEEQYRIRQVNIYYYL 126

Query: 109 EDDTIQVNEPEVKNSGLLQGTSIRRHRITLPPPDEDQFYTVYHFNVGTEVVFYGRTFKIY 168
           EDD++ V EP V+NSG+LQG  I+R R  L   D    Y     N G  +  YG+TF++ 
Sbjct: 127 EDDSMSVIEPVVENSGILQGKLIKRQR--LAKNDRGDHYHWKDLNRGINITIYGKTFRVV 184

Query: 169 DCDAFTRNFLRKIGVKVNPPVQCPEDPYMKIRREVVEHVEPLRPY---ESLDTLKQFLQY 225
           DCD FT+ FL   G+++NPP +   DPY ++R++      PLR Y      D LKQFL +
Sbjct: 185 DCDQFTQVFLESQGIELNPPEKMALDPYTELRKQ------PLRKYVTPSDFDQLKQFLTF 238

Query: 226 HGKILCFFCLWDDSVSMFGDRRELILHYFLCDDTIEIKELLPHSSGRDALKMFLRRSKLP 285
             ++L F+ +WDD+ SM+G+ R  I+HY+L DDT+EI+E+   + GRD   + + R ++P
Sbjct: 239 DKQVLRFYAIWDDTDSMYGECRTYIIHYYLMDDTVEIREVHERNDGRDPFPLLMNRQRVP 298

Query: 286 K-------NCPPRVYQPGQITDRAVLNSYGDFIKNQADGYLFDRYKLGKVDQEFYKDSDL 338
           K       N P  V +   I+D+ VL                          E+Y   D 
Sbjct: 299 KVLVENAKNFPQCVLE---ISDQEVL--------------------------EWYTAKDF 329

Query: 339 SLGVTINVWGRKVLLYDCDEFTKSYYKSKYGIENFTSVSCKPPSPPPKIERKFPPYNGFG 398
            +G ++ + GR   +YDCD FT+ YYK K+GI +   +      PPP ++++ PPYNGFG
Sbjct: 330 IVGKSLTILGRTFFIYDCDPFTRRYYKEKFGITDLPRIDVSKREPPP-VKQELPPYNGFG 388

Query: 399 SEEDSLRNCIDLKPTPHRRNFKKFMEKDSYGSKSNILRFFAKLVTDKCVDLDRMFVISYY 458
             EDS +NC  L P   +++  K +  D+      +LR+ A L +    D DR FV SY+
Sbjct: 389 LVEDSAQNCFALIPKAPKKDVIKMLVNDN-----KVLRYLAVLESPIPEDKDRRFVFSYF 443

Query: 459 LGDDTISVFEPIERNSGIAGGMFLKRSRVKKPGQEVFKSELSEYIKAEELYIGVTVNVNG 518
           L  D IS+FEP  RNSGI GG +L R++V KP   V   +   Y    + +IG  + V G
Sbjct: 444 LATDMISIFEPPVRNSGIIGGKYLGRTKVVKPYSTV---DNPVYYGPSDFFIGAVIEVFG 500

Query: 519 YLFRLLNADEYTLNYMEQNTDKYPFSNLKLALQKLKQEEGKSRELKQVFKAADSKHTNMV 578
           + F +L+ DEY L YME N  +Y    L      +++ E  + E       A+SK T   
Sbjct: 501 HRFIILDTDEYVLKYMESNAAQYSPEALASIQNHVRKREAPAPE-------AESKQTE-- 551

Query: 579 DYNTFRDILMSLTVGNLAEQEFVTIARHYRVPEGTCSDMDFLIALAHEKFKKNMFENFDT 638
                +D         + E E +      ++ + +C D              N+ E F  
Sbjct: 552 -----KD-------PGVQELEALIDTIQKQLKDHSCKD--------------NIREAFQI 585

Query: 639 FIYSCVYEDREKKNVLPTKDIKRLCKSSRLPLSDDLLESLLSRFEDSEKQIDYKSFFSAL 698
           +       D+E    +      ++C+S  +P+ D L++ L+      E +I+Y +F  A 
Sbjct: 586 Y-------DKEASGYVDRDMFFKICESLNVPVDDSLVKELIRMCSHGEGKINYYNFVRAF 638

Query: 699 N 699
           +
Sbjct: 639 S 639


>gi|148613876 EF hand domain family, member B [Homo sapiens]
          Length = 833

 Score = 46.2 bits (108), Expect = 1e-04
 Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 5/120 (4%)

Query: 606 HYRVPEGTCSDMD---FLIALAHEKFKKNMFENFDTFIYSCVYEDREKKNVLPTKDIKRL 662
           H R+P+      D    LIA      KK  ++ FDT + +  + D++   ++   +++  
Sbjct: 530 HNRLPDEYLRGKDRQRALIAAVRHHLKKVNYQKFDTLLAAFRHYDKKGDGMIDKDELQEA 589

Query: 663 CKSSRLPLSDDLLESLLSRFE-DSEKQIDYKSFFSALNWR-KNPVPELQPASYLKERCED 720
           C  + L L D LL+ L    + D++  I+Y  F + LNW+ K  + E +    +K R  D
Sbjct: 590 CDQANLSLDDKLLDQLFDYCDVDNDGFINYLEFANFLNWKDKMLLKEYEERVIIKGRKPD 649


>gi|7705383 calpain 9 isoform 2 [Homo sapiens]
          Length = 664

 Score = 35.8 bits (81), Expect = 0.15
 Identities = 15/52 (28%), Positives = 29/52 (55%)

Query: 647 DREKKNVLPTKDIKRLCKSSRLPLSDDLLESLLSRFEDSEKQIDYKSFFSAL 698
           D +K   + T +++   K++   LS  LL+ ++ R+ D E Q+D+  F + L
Sbjct: 578 DADKSGTMSTYELRTALKAAGFQLSSHLLQLIVLRYADEELQLDFDDFLNCL 629


>gi|5729758 calpain 9 isoform 1 [Homo sapiens]
          Length = 690

 Score = 35.8 bits (81), Expect = 0.15
 Identities = 15/52 (28%), Positives = 29/52 (55%)

Query: 647 DREKKNVLPTKDIKRLCKSSRLPLSDDLLESLLSRFEDSEKQIDYKSFFSAL 698
           D +K   + T +++   K++   LS  LL+ ++ R+ D E Q+D+  F + L
Sbjct: 604 DADKSGTMSTYELRTALKAAGFQLSSHLLQLIVLRYADEELQLDFDDFLNCL 655


>gi|87298937 centrosomal protein 110kDa [Homo sapiens]
          Length = 2325

 Score = 32.7 bits (73), Expect = 1.3
 Identities = 48/202 (23%), Positives = 88/202 (43%), Gaps = 18/202 (8%)

Query: 386 KIERKFPPYNGFGSEEDSLRNCIDLKPTPHRRNFKKFM-EKDSYGSKSNILRFFAKLVTD 444
           KI+ KF P N + SE   +    D  P   +  +K+ M   +SY   S       K+  D
Sbjct: 360 KIDAKFEPLNYYPSEYAEIDKAPDESPYIGKSRYKRNMFATESYIIDSAQAVQIKKMEPD 419

Query: 445 KCVDLDRMFVISYYLGDDTISVFEPIERNSGIAGGMFLKRSRVKKPGQEVFKSELSEYIK 504
           + +  D M +  +   D  +   E  ++ S     +      ++K  Q++ ++   E+ +
Sbjct: 420 EQLRNDHMNLRGHTPLDTQLEDKE--KKISAAQTRLSELHDEIEKAEQQILRA-TEEFKQ 476

Query: 505 AEELYIGVTVNVNG--YLFRLLNADEYTLNYMEQNTDKYPFSNLKLALQKLKQE-EGKSR 561
            EE      ++  G   L++ L+     +N + Q        +L+L ++K KQE  GK +
Sbjct: 477 LEEAIQLKKISEAGKDLLYKQLSGRLQLVNKLRQEA-----LDLELQMEKQKQEIAGKQK 531

Query: 562 ELKQVFKAADS------KHTNM 577
           E+K +  A DS      KH++M
Sbjct: 532 EIKDLQIAIDSLDSKDPKHSHM 553


>gi|25901062 hypothetical protein LOC56261 [Homo sapiens]
          Length = 672

 Score = 32.0 bits (71), Expect = 2.2
 Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 4/68 (5%)

Query: 538 TDKYPFSNLKLALQKLKQEEGKSRELKQVFKAA----DSKHTNMVDYNTFRDILMSLTVG 593
           ++  PF +LK+ L+ L ++ G + E+K + +      D   +   D N F DI++   + 
Sbjct: 433 SENQPFPSLKMVLESLPEDVGFNIEIKWICQQRDGMWDGNLSTYFDMNLFLDIILKTVLE 492

Query: 594 NLAEQEFV 601
           N  ++  V
Sbjct: 493 NSGKRRIV 500


>gi|148886654 polydom [Homo sapiens]
          Length = 3571

 Score = 32.0 bits (71), Expect = 2.2
 Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)

Query: 139  PPPDEDQFYTVYHFNVGTEVVFY-GRTFKIYDCDAFTRNFLRKIGVKVNP---PVQCPED 194
            PPP ++ F    +F VG++V F+    +++    ++T     K   K NP   P +CPE 
Sbjct: 2267 PPPIQNGFMKGENFEVGSKVQFFCNEGYELVGDSSWTCQKSGKWNKKSNPKCMPAKCPEP 2326

Query: 195  PYMK 198
            P ++
Sbjct: 2327 PLLE 2330


>gi|22748811 hypothetical protein LOC127795 [Homo sapiens]
          Length = 546

 Score = 31.2 bits (69), Expect = 3.7
 Identities = 24/92 (26%), Positives = 39/92 (42%), Gaps = 16/92 (17%)

Query: 635 NFDTFIYSCVYEDREKKNVLPTKDIKRLCKSSRLPLSDDLLESLLSRFE-DSEKQIDYKS 693
           N D    S   EDR     LP   ++ +C    L L+  LLE+LL+  +   + +I +++
Sbjct: 320 NIDNLNLSFRKEDRSFSGCLPLPKVRAICGKHGLYLTLSLLETLLNHQDLGYQNEIKWQN 379

Query: 694 FFSAL---------------NWRKNPVPELQP 710
           F   L               N +K P P ++P
Sbjct: 380 FVEMLTRASSDLLSDLPTGKNEKKAPAPPMEP 411


>gi|109255234 centrosomal protein 290kDa [Homo sapiens]
          Length = 2479

 Score = 30.8 bits (68), Expect = 4.8
 Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 4/62 (6%)

Query: 626  EKFKKNMFENFDTFIYSCVYEDREKKNVLPTKDIKRLCKSSRLPLSDDLLESLLSRFEDS 685
            E F  + FE  +   Y+  Y++  KKN+L  + +K+L +   + L+  +  S    FED 
Sbjct: 2414 ENFDPSFFEEIEDLKYN--YKEEVKKNILLEEKVKKLSEQLGVELTSPVAAS--EEFEDE 2469

Query: 686  EK 687
            E+
Sbjct: 2470 EE 2471


>gi|40807471 transcription termination factor, RNA polymerase II [Homo
            sapiens]
          Length = 1162

 Score = 30.8 bits (68), Expect = 4.8
 Identities = 13/45 (28%), Positives = 24/45 (53%)

Query: 238  DSVSMFGDRRELILHYFLCDDTIEIKELLPHSSGRDALKMFLRRS 282
            D +   G ++++++H F+C+ T+E K L      +D  K  L  S
Sbjct: 1100 DRIYRVGQQKDVVIHRFVCEGTVEEKILQLQEKKKDLAKQVLSGS 1144


>gi|11545811 hepatocellular carcinoma antigen gene 520 [Homo
           sapiens]
          Length = 196

 Score = 30.8 bits (68), Expect = 4.8
 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 3/52 (5%)

Query: 647 DREKKNVLPTKDIKRLCKSSRLPLSDDLLESLLSRFEDSEKQIDYKSFFSAL 698
           DR KK  L   D++++   +  PL D ++ES    F D  +++D+  F   L
Sbjct: 39  DRNKKGYLSRMDLQQIGALAVNPLGDRIIESF---FPDGSQRVDFPGFVRVL 87


>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
          Length = 1363

 Score = 30.4 bits (67), Expect = 6.3
 Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 6/81 (7%)

Query: 355 DCDEFTKSYYKSKYGIENFTSVSCKPPSPPPKIERKFPPYNGFGSEEDSLRNCIDLKP-T 413
           DCD   K Y K     E+F +    P SPP    +K PP +G      ++++     P  
Sbjct: 44  DCDAQCKKYDKCCPDYESFCAEVHNPTSPPS--SKKAPPPSG---ASQTIKSTTKRSPKP 98

Query: 414 PHRRNFKKFMEKDSYGSKSNI 434
           P+++  KK +E +    + ++
Sbjct: 99  PNKKKTKKVIESEEITEEHSV 119


>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
          Length = 1404

 Score = 30.4 bits (67), Expect = 6.3
 Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 6/81 (7%)

Query: 355 DCDEFTKSYYKSKYGIENFTSVSCKPPSPPPKIERKFPPYNGFGSEEDSLRNCIDLKP-T 413
           DCD   K Y K     E+F +    P SPP    +K PP +G      ++++     P  
Sbjct: 85  DCDAQCKKYDKCCPDYESFCAEVHNPTSPPS--SKKAPPPSG---ASQTIKSTTKRSPKP 139

Query: 414 PHRRNFKKFMEKDSYGSKSNI 434
           P+++  KK +E +    + ++
Sbjct: 140 PNKKKTKKVIESEEITEEHSV 160


>gi|38570109 CAP-binding protein complex interacting protein 1
           isoform b [Homo sapiens]
          Length = 1349

 Score = 30.0 bits (66), Expect = 8.2
 Identities = 21/96 (21%), Positives = 37/96 (38%), Gaps = 1/96 (1%)

Query: 610 PEGTCSDMDFLIALAHEKFKKNMFENFDTFIYSCVYEDREKKNVLPTKDIKRLCKSSRLP 669
           P+   +D +     AH+         +     + +  D E   +L  +DIK       +P
Sbjct: 671 PKQKVADSELACEQAHQYLVTKAKNRWSDLSKNFLETDNEGNGILRRRDIKNALYGFDIP 730

Query: 670 LSDDLLESLLSRFEDSEK-QIDYKSFFSALNWRKNP 704
           L+    E L +R++   K  I Y+ F   L    +P
Sbjct: 731 LTPREFEKLWARYDTEGKGHITYQEFLQKLGINYSP 766


>gi|38570107 CAP-binding protein complex interacting protein 1
           isoform a [Homo sapiens]
          Length = 1501

 Score = 30.0 bits (66), Expect = 8.2
 Identities = 21/96 (21%), Positives = 37/96 (38%), Gaps = 1/96 (1%)

Query: 610 PEGTCSDMDFLIALAHEKFKKNMFENFDTFIYSCVYEDREKKNVLPTKDIKRLCKSSRLP 669
           P+   +D +     AH+         +     + +  D E   +L  +DIK       +P
Sbjct: 823 PKQKVADSELACEQAHQYLVTKAKNRWSDLSKNFLETDNEGNGILRRRDIKNALYGFDIP 882

Query: 670 LSDDLLESLLSRFEDSEK-QIDYKSFFSALNWRKNP 704
           L+    E L +R++   K  I Y+ F   L    +P
Sbjct: 883 LTPREFEKLWARYDTEGKGHITYQEFLQKLGINYSP 918


>gi|4557777 slow skeletal ventricular myosin alkali light chain 3
           [Homo sapiens]
          Length = 195

 Score = 30.0 bits (66), Expect = 8.2
 Identities = 33/138 (23%), Positives = 59/138 (42%), Gaps = 7/138 (5%)

Query: 562 ELKQVFKAADS--KHTNMVDYNTFRDILMSLTVGNLAEQEFVTIARHYRVPEGTCSDMDF 619
           E K+ F   D   K    + Y    D+L +L   N  + E + +    R  E     MDF
Sbjct: 53  EFKEAFMLFDRTPKCEMKITYGQCGDVLRALGQ-NPTQAEVLRVLGKPRQEELNTKMMDF 111

Query: 620 ---LIALAHEKFKKNMFENFDTFIYSCVYEDREKKNVLPTKDIKRLCKSSRLPLSDDLLE 676
              L  L H    K+    ++ F+      D+E    +   +++ +  +    L++D +E
Sbjct: 112 ETFLPMLQHISKNKDT-GTYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGERLTEDEVE 170

Query: 677 SLLSRFEDSEKQIDYKSF 694
            L++  EDS   I+Y++F
Sbjct: 171 KLMAGQEDSNGCINYEAF 188


>gi|17986258 myosin, light chain 6, alkali, smooth muscle and
           non-muscle isoform 1 [Homo sapiens]
          Length = 151

 Score = 30.0 bits (66), Expect = 8.2
 Identities = 25/140 (17%), Positives = 61/140 (43%), Gaps = 3/140 (2%)

Query: 557 EGKSRELKQVFKAADSKHTNMVDYNTFRDILMSLTVGNLAEQEFVTIARHYRVPEGTCSD 616
           E ++ E K+ F+  D      + Y+   D++ +L   N    E + +  + +  E     
Sbjct: 6   EDQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQ-NPTNAEVLKVLGNPKSDEMNVKV 64

Query: 617 MDF--LIALAHEKFKKNMFENFDTFIYSCVYEDREKKNVLPTKDIKRLCKSSRLPLSDDL 674
           +DF   + +     K      ++ ++      D+E    +   +I+ +  +    ++++ 
Sbjct: 65  LDFEHFLPMLQTVAKNKDQGTYEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEEE 124

Query: 675 LESLLSRFEDSEKQIDYKSF 694
           +E L++  EDS   I+Y++F
Sbjct: 125 VEMLVAGHEDSNGCINYEAF 144


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.139    0.424 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,139,549
Number of Sequences: 37866
Number of extensions: 1518274
Number of successful extensions: 4277
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 4237
Number of HSP's gapped (non-prelim): 30
length of query: 749
length of database: 18,247,518
effective HSP length: 110
effective length of query: 639
effective length of database: 14,082,258
effective search space: 8998562862
effective search space used: 8998562862
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.