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Search of human proteins with 31377663
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|31377663 SVH protein isoform a [Homo sapiens]
(343 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|31377663 SVH protein isoform a [Homo sapiens] 676 0.0
gi|238776793 SVH protein isoform b [Homo sapiens] 584 e-167
gi|238776797 SVH protein isoform e [Homo sapiens] 527 e-150
gi|169165522 PREDICTED: similar to SVH protein isoform 1 [Homo s... 525 e-149
gi|169165931 PREDICTED: similar to SVH protein isoform 1 [Homo s... 522 e-148
gi|113414573 PREDICTED: similar to SVH protein isoform 2 [Homo s... 522 e-148
gi|238776795 SVH protein isoform c [Homo sapiens] 460 e-130
gi|169165524 PREDICTED: similar to SVH protein isoform 2 [Homo s... 449 e-126
gi|113415138 PREDICTED: similar to SVH protein isoform 2 [Homo s... 446 e-125
gi|169165133 PREDICTED: similar to SVH protein isoform 1 [Homo s... 446 e-125
gi|238776799 SVH protein isoform d [Homo sapiens] 417 e-117
gi|29540566 armadillo repeat containing, X-linked 3 [Homo sapiens] 295 4e-80
gi|29540564 armadillo repeat containing, X-linked 3 [Homo sapiens] 295 4e-80
gi|7705274 armadillo repeat containing, X-linked 3 [Homo sapiens] 295 4e-80
gi|7706143 armadillo repeat containing, X-linked 1 [Homo sapiens] 266 3e-71
gi|238776801 SVH protein isoform f [Homo sapiens] 262 4e-70
gi|7662162 ALEX2 protein [Homo sapiens] 235 5e-62
gi|29540562 ALEX2 protein [Homo sapiens] 235 5e-62
gi|239757861 PREDICTED: similar to armadillo repeat containing, ... 205 5e-53
gi|41054846 armadillo repeat containing, X-linked 5 [Homo sapiens] 141 7e-34
gi|34147335 armadillo repeat containing, X-linked 6 [Homo sapiens] 125 4e-29
gi|57546906 armadillo repeat containing, X-linked 6 [Homo sapiens] 125 4e-29
gi|51702248 G protein-coupled receptor associated sorting protei... 123 2e-28
gi|19923967 G protein-coupled receptor associated sorting protei... 123 2e-28
gi|150378528 G protein-coupled receptor associated sorting prote... 120 1e-27
gi|150378489 G protein-coupled receptor associated sorting prote... 120 1e-27
gi|103472136 G protein-coupled receptor associated sorting prote... 120 1e-27
gi|216547715 basic helix-loop-helix domain containing, class B, ... 112 4e-25
gi|216547682 basic helix-loop-helix domain containing, class B, ... 112 4e-25
gi|216547672 basic helix-loop-helix domain containing, class B, ... 112 4e-25
>gi|31377663 SVH protein isoform a [Homo sapiens]
Length = 343
Score = 676 bits (1744), Expect = 0.0
Identities = 343/343 (100%), Positives = 343/343 (100%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAGALEEGTSEGQLCG 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAGALEEGTSEGQLCG
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAGALEEGTSEGQLCG 60
Query: 61 RSARPQTGGTWESQWSKTSQPEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 120
RSARPQTGGTWESQWSKTSQPEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT
Sbjct: 61 RSARPQTGGTWESQWSKTSQPEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 120
Query: 121 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYIS 180
LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYIS
Sbjct: 121 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYIS 180
Query: 181 QVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTKVQVLK 240
QVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTKVQVLK
Sbjct: 181 QVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTKVQVLK 240
Query: 241 LLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQ 300
LLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQ
Sbjct: 241 LLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQ 300
Query: 301 PTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 343
PTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI
Sbjct: 301 PTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 343
>gi|238776793 SVH protein isoform b [Homo sapiens]
Length = 308
Score = 584 bits (1506), Expect = e-167
Identities = 308/343 (89%), Positives = 308/343 (89%), Gaps = 35/343 (10%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAGALEEGTSEGQLCG 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSA-------------- 46
Query: 61 RSARPQTGGTWESQWSKTSQPEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 120
EDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT
Sbjct: 47 ---------------------EDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 85
Query: 121 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYIS 180
LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYIS
Sbjct: 86 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYIS 145
Query: 181 QVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTKVQVLK 240
QVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTKVQVLK
Sbjct: 146 QVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTKVQVLK 205
Query: 241 LLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQ 300
LLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQ
Sbjct: 206 LLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQ 265
Query: 301 PTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 343
PTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI
Sbjct: 266 PTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 308
>gi|238776797 SVH protein isoform e [Homo sapiens]
Length = 284
Score = 527 bits (1358), Expect = e-150
Identities = 284/343 (82%), Positives = 284/343 (82%), Gaps = 59/343 (17%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAGALEEGTSEGQLCG 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSA-------------- 46
Query: 61 RSARPQTGGTWESQWSKTSQPEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 120
EDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT
Sbjct: 47 ---------------------EDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 85
Query: 121 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYIS 180
LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYIS
Sbjct: 86 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYIS 145
Query: 181 QVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTKVQVLK 240
QVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTK
Sbjct: 146 QVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTK----- 200
Query: 241 LLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQ 300
VDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQ
Sbjct: 201 -------------------VDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQ 241
Query: 301 PTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 343
PTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI
Sbjct: 242 PTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 284
>gi|169165522 PREDICTED: similar to SVH protein isoform 1 [Homo
sapiens]
Length = 284
Score = 525 bits (1352), Expect = e-149
Identities = 283/343 (82%), Positives = 283/343 (82%), Gaps = 59/343 (17%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAGALEEGTSEGQLCG 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSA-------------- 46
Query: 61 RSARPQTGGTWESQWSKTSQPEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 120
EDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT
Sbjct: 47 ---------------------EDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 85
Query: 121 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYIS 180
LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYIS
Sbjct: 86 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYIS 145
Query: 181 QVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTKVQVLK 240
QVCEDVFSGPLNSAVQLAGL LLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTK
Sbjct: 146 QVCEDVFSGPLNSAVQLAGLRLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTK----- 200
Query: 241 LLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQ 300
VDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQ
Sbjct: 201 -------------------VDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQ 241
Query: 301 PTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 343
PTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI
Sbjct: 242 PTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 284
>gi|169165931 PREDICTED: similar to SVH protein isoform 1 [Homo
sapiens]
Length = 284
Score = 522 bits (1344), Expect = e-148
Identities = 281/343 (81%), Positives = 283/343 (82%), Gaps = 59/343 (17%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAGALEEGTSEGQLCG 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSA-------------- 46
Query: 61 RSARPQTGGTWESQWSKTSQPEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 120
EDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT
Sbjct: 47 ---------------------EDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 85
Query: 121 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYIS 180
LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK+KALNALNNLSVNVENQIKIKIYIS
Sbjct: 86 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKDKALNALNNLSVNVENQIKIKIYIS 145
Query: 181 QVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTKVQVLK 240
QVCEDVFSGPLNSAVQLAGL LLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTK
Sbjct: 146 QVCEDVFSGPLNSAVQLAGLRLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTK----- 200
Query: 241 LLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQ 300
VDSSFLSLYDSHVAKEILLRVLTLFQ+IKNCLKIEGHLAVQ
Sbjct: 201 -------------------VDSSFLSLYDSHVAKEILLRVLTLFQHIKNCLKIEGHLAVQ 241
Query: 301 PTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 343
PTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI
Sbjct: 242 PTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 284
>gi|113414573 PREDICTED: similar to SVH protein isoform 2 [Homo
sapiens]
Length = 284
Score = 522 bits (1344), Expect = e-148
Identities = 281/343 (81%), Positives = 283/343 (82%), Gaps = 59/343 (17%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAGALEEGTSEGQLCG 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSA-------------- 46
Query: 61 RSARPQTGGTWESQWSKTSQPEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 120
EDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT
Sbjct: 47 ---------------------EDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 85
Query: 121 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYIS 180
LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK+KALNALNNLSVNVENQIKIKIYIS
Sbjct: 86 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKDKALNALNNLSVNVENQIKIKIYIS 145
Query: 181 QVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTKVQVLK 240
QVCEDVFSGPLNSAVQLAGL LLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTK
Sbjct: 146 QVCEDVFSGPLNSAVQLAGLRLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTK----- 200
Query: 241 LLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQ 300
VDSSFLSLYDSHVAKEILLRVLTLFQ+IKNCLKIEGHLAVQ
Sbjct: 201 -------------------VDSSFLSLYDSHVAKEILLRVLTLFQHIKNCLKIEGHLAVQ 241
Query: 301 PTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 343
PTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI
Sbjct: 242 PTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 284
>gi|238776795 SVH protein isoform c [Homo sapiens]
Length = 284
Score = 460 bits (1184), Expect = e-130
Identities = 253/343 (73%), Positives = 262/343 (76%), Gaps = 59/343 (17%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAGALEEGTSEGQLCG 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAGALEEGTSEGQLCG
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAGALEEGTSEGQLCG 60
Query: 61 RSARPQTGGTWESQWSKTSQPEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 120
RSARPQTGGTWESQWSKTSQPEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT
Sbjct: 61 RSARPQTGGTWESQWSKTSQPEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 120
Query: 121 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYIS 180
LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIK+ +
Sbjct: 121 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKVQVL 180
Query: 181 QVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTKVQVLK 240
++ L L N +T G + QV
Sbjct: 181 KLL----------------LNLSENPAMT---------------------EGLLRAQVDS 203
Query: 241 LLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQ 300
L+L ++ E LLR VLTLFQNIKNCLKIEGHLAVQ
Sbjct: 204 SFLSLYDSHVAKEILLR----------------------VLTLFQNIKNCLKIEGHLAVQ 241
Query: 301 PTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 343
PTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI
Sbjct: 242 PTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 284
>gi|169165524 PREDICTED: similar to SVH protein isoform 2 [Homo
sapiens]
Length = 253
Score = 449 bits (1155), Expect = e-126
Identities = 253/343 (73%), Positives = 253/343 (73%), Gaps = 90/343 (26%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAGALEEGTSEGQLCG 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSA-------------- 46
Query: 61 RSARPQTGGTWESQWSKTSQPEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 120
EDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT
Sbjct: 47 ---------------------EDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 85
Query: 121 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYIS 180
LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYIS
Sbjct: 86 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYIS 145
Query: 181 QVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTKVQVLK 240
QVCEDVFSGPLNSA VLLTGNGNTK
Sbjct: 146 QVCEDVFSGPLNSA-------------------------------VLLTGNGNTK----- 169
Query: 241 LLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQ 300
VDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQ
Sbjct: 170 -------------------VDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQ 210
Query: 301 PTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 343
PTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI
Sbjct: 211 PTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 253
>gi|113415138 PREDICTED: similar to SVH protein isoform 2 [Homo
sapiens]
Length = 253
Score = 446 bits (1147), Expect = e-125
Identities = 251/343 (73%), Positives = 253/343 (73%), Gaps = 90/343 (26%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAGALEEGTSEGQLCG 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSA-------------- 46
Query: 61 RSARPQTGGTWESQWSKTSQPEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 120
EDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT
Sbjct: 47 ---------------------EDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 85
Query: 121 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYIS 180
LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK+KALNALNNLSVNVENQIKIKIYIS
Sbjct: 86 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKDKALNALNNLSVNVENQIKIKIYIS 145
Query: 181 QVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTKVQVLK 240
QVCEDVFSGPLNSA VLLTGNGNTK
Sbjct: 146 QVCEDVFSGPLNSA-------------------------------VLLTGNGNTK----- 169
Query: 241 LLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQ 300
VDSSFLSLYDSHVAKEILLRVLTLFQ+IKNCLKIEGHLAVQ
Sbjct: 170 -------------------VDSSFLSLYDSHVAKEILLRVLTLFQHIKNCLKIEGHLAVQ 210
Query: 301 PTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 343
PTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI
Sbjct: 211 PTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 253
>gi|169165133 PREDICTED: similar to SVH protein isoform 1 [Homo
sapiens]
Length = 253
Score = 446 bits (1147), Expect = e-125
Identities = 251/343 (73%), Positives = 253/343 (73%), Gaps = 90/343 (26%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAGALEEGTSEGQLCG 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSA-------------- 46
Query: 61 RSARPQTGGTWESQWSKTSQPEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 120
EDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT
Sbjct: 47 ---------------------EDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 85
Query: 121 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYIS 180
LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK+KALNALNNLSVNVENQIKIKIYIS
Sbjct: 86 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKDKALNALNNLSVNVENQIKIKIYIS 145
Query: 181 QVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTKVQVLK 240
QVCEDVFSGPLNSA VLLTGNGNTK
Sbjct: 146 QVCEDVFSGPLNSA-------------------------------VLLTGNGNTK----- 169
Query: 241 LLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQ 300
VDSSFLSLYDSHVAKEILLRVLTLFQ+IKNCLKIEGHLAVQ
Sbjct: 170 -------------------VDSSFLSLYDSHVAKEILLRVLTLFQHIKNCLKIEGHLAVQ 210
Query: 301 PTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 343
PTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI
Sbjct: 211 PTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 253
>gi|238776799 SVH protein isoform d [Homo sapiens]
Length = 249
Score = 417 bits (1073), Expect = e-117
Identities = 239/343 (69%), Positives = 244/343 (71%), Gaps = 94/343 (27%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAGALEEGTSEGQLCG 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSA-------------- 46
Query: 61 RSARPQTGGTWESQWSKTSQPEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 120
EDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT
Sbjct: 47 ---------------------EDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 85
Query: 121 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYIS 180
LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNA
Sbjct: 86 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNA------------------- 126
Query: 181 QVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTKVQVLK 240
L N++V ++Q + KVQVLK
Sbjct: 127 ----------------------LNNLSVNVENQIKI------------------KVQVLK 146
Query: 241 LLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQ 300
LLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQ
Sbjct: 147 LLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQ 206
Query: 301 PTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 343
PTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI
Sbjct: 207 PTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 249
>gi|29540566 armadillo repeat containing, X-linked 3 [Homo sapiens]
Length = 379
Score = 295 bits (755), Expect = 4e-80
Identities = 171/371 (46%), Positives = 232/371 (62%), Gaps = 30/371 (8%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKS-------AGALEEGT 53
MG R GWV AGL++GAGACYCIYRLTRGR++ ++ S +GA
Sbjct: 1 MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCSGARYNDW 60
Query: 54 SE--------------------GQLCGRSARPQTGGTWESQWSKTSQPEDLTDGSYDDVL 93
S+ G G AR + + ++ + + + S D VL
Sbjct: 61 SDDDDDSNESKSIVWYPPWARIGTEAGTRARARARA--RATRARRAVQKRASPNSDDTVL 118
Query: 94 NAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQS 153
+ ++LQK+L L+E +E P I+E ALI LGNNAA++ N+ IIR+LGG+PIVA +N +
Sbjct: 119 SPQELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDIIRDLGGLPIVAKILNTRDPI 178
Query: 154 IKEKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQ 213
+KEKAL LNNLSVN ENQ ++K+Y++QVC+D + LNS+VQLAGL LLTNMTVTN++Q
Sbjct: 179 VKEKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQ 238
Query: 214 HMLHSYITDLFQVLLTGNGNTKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVA 273
HML + I+D F++ GN TK+QVLKLLLNL+ENPAMT LLRAQV SS SL++
Sbjct: 239 HMLANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTRELLRAQVPSSLGSLFNKKEN 298
Query: 274 KEILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLL-HGEECAQKIRALVDHHDAEV 332
KE++L++L +F+NI + K E + Q F EGSLFF L + CA K+ + HHD V
Sbjct: 299 KEVILKLLVIFENINDNFKWEENEPTQNQFGEGSLFFFLKEFQVCADKVLGIESHHDFLV 358
Query: 333 KEKVVTIIPKI 343
K KV + K+
Sbjct: 359 KVKVGKFMAKL 369
>gi|29540564 armadillo repeat containing, X-linked 3 [Homo sapiens]
Length = 379
Score = 295 bits (755), Expect = 4e-80
Identities = 171/371 (46%), Positives = 232/371 (62%), Gaps = 30/371 (8%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKS-------AGALEEGT 53
MG R GWV AGL++GAGACYCIYRLTRGR++ ++ S +GA
Sbjct: 1 MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCSGARYNDW 60
Query: 54 SE--------------------GQLCGRSARPQTGGTWESQWSKTSQPEDLTDGSYDDVL 93
S+ G G AR + + ++ + + + S D VL
Sbjct: 61 SDDDDDSNESKSIVWYPPWARIGTEAGTRARARARA--RATRARRAVQKRASPNSDDTVL 118
Query: 94 NAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQS 153
+ ++LQK+L L+E +E P I+E ALI LGNNAA++ N+ IIR+LGG+PIVA +N +
Sbjct: 119 SPQELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDIIRDLGGLPIVAKILNTRDPI 178
Query: 154 IKEKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQ 213
+KEKAL LNNLSVN ENQ ++K+Y++QVC+D + LNS+VQLAGL LLTNMTVTN++Q
Sbjct: 179 VKEKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQ 238
Query: 214 HMLHSYITDLFQVLLTGNGNTKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVA 273
HML + I+D F++ GN TK+QVLKLLLNL+ENPAMT LLRAQV SS SL++
Sbjct: 239 HMLANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTRELLRAQVPSSLGSLFNKKEN 298
Query: 274 KEILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLL-HGEECAQKIRALVDHHDAEV 332
KE++L++L +F+NI + K E + Q F EGSLFF L + CA K+ + HHD V
Sbjct: 299 KEVILKLLVIFENINDNFKWEENEPTQNQFGEGSLFFFLKEFQVCADKVLGIESHHDFLV 358
Query: 333 KEKVVTIIPKI 343
K KV + K+
Sbjct: 359 KVKVGKFMAKL 369
>gi|7705274 armadillo repeat containing, X-linked 3 [Homo sapiens]
Length = 379
Score = 295 bits (755), Expect = 4e-80
Identities = 171/371 (46%), Positives = 232/371 (62%), Gaps = 30/371 (8%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKS-------AGALEEGT 53
MG R GWV AGL++GAGACYCIYRLTRGR++ ++ S +GA
Sbjct: 1 MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCSGARYNDW 60
Query: 54 SE--------------------GQLCGRSARPQTGGTWESQWSKTSQPEDLTDGSYDDVL 93
S+ G G AR + + ++ + + + S D VL
Sbjct: 61 SDDDDDSNESKSIVWYPPWARIGTEAGTRARARARA--RATRARRAVQKRASPNSDDTVL 118
Query: 94 NAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQS 153
+ ++LQK+L L+E +E P I+E ALI LGNNAA++ N+ IIR+LGG+PIVA +N +
Sbjct: 119 SPQELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDIIRDLGGLPIVAKILNTRDPI 178
Query: 154 IKEKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQ 213
+KEKAL LNNLSVN ENQ ++K+Y++QVC+D + LNS+VQLAGL LLTNMTVTN++Q
Sbjct: 179 VKEKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQ 238
Query: 214 HMLHSYITDLFQVLLTGNGNTKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVA 273
HML + I+D F++ GN TK+QVLKLLLNL+ENPAMT LLRAQV SS SL++
Sbjct: 239 HMLANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTRELLRAQVPSSLGSLFNKKEN 298
Query: 274 KEILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLL-HGEECAQKIRALVDHHDAEV 332
KE++L++L +F+NI + K E + Q F EGSLFF L + CA K+ + HHD V
Sbjct: 299 KEVILKLLVIFENINDNFKWEENEPTQNQFGEGSLFFFLKEFQVCADKVLGIESHHDFLV 358
Query: 333 KEKVVTIIPKI 343
K KV + K+
Sbjct: 359 KVKVGKFMAKL 369
>gi|7706143 armadillo repeat containing, X-linked 1 [Homo sapiens]
Length = 453
Score = 266 bits (679), Expect = 3e-71
Identities = 150/305 (49%), Positives = 199/305 (65%), Gaps = 9/305 (2%)
Query: 41 RSSKSAGALEEGTSEGQLCGRSAR-PQTGGTWESQWSKTSQPEDLTDGSYDDVLNAEQLQ 99
RS AG G S+G+ +S R P T TW + K + P + DD+L+A LQ
Sbjct: 156 RSGSRAGGRASGKSKGKARSKSTRAPAT--TWPVRRGKFNFPYKI-----DDILSAPDLQ 208
Query: 100 KLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKAL 159
K+L +LE T DP I E AL+TLGNNAA+S NQ IRELGG+PI+A I + I+EK
Sbjct: 209 KVLNILERTNDPFIQEVALVTLGNNAAYSFNQNAIRELGGVPIIAKLIKTKDPIIREKTY 268
Query: 160 NALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHMLHSY 219
NALNNLSVN ENQ KIK YISQVC+D L+SAVQ+AGL LLTNMTVTN +QH+L
Sbjct: 269 NALNNLSVNAENQGKIKTYISQVCDDTMVCRLDSAVQMAGLRLLTNMTVTNHYQHLLSYS 328
Query: 220 ITDLFQVLLTGNGNTKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLR 279
D F +L GN TK+Q++KL++N +ENPAMT L+ +V S +SL++ +EILL
Sbjct: 329 FPDFFALLFLGNHFTKIQIMKLIINFTENPAMTRELVSCKVPSELISLFNKEWDREILLN 388
Query: 280 VLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLL-HGEECAQKIRALVDHHDAEVKEKVVT 338
+LTLF+NI + +K EG + + F+ SLFFL C +KI+AL +H+D VK KV+
Sbjct: 389 ILTLFENINDNIKNEGLASSRKEFSRSSLFFLFKESGVCVKKIKALANHNDLVVKVKVLK 448
Query: 339 IIPKI 343
++ K+
Sbjct: 449 VLTKL 453
Score = 50.1 bits (118), Expect = 3e-06
Identities = 30/75 (40%), Positives = 40/75 (53%), Gaps = 20/75 (26%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDR------------ELGIRSSKSA-- 46
MG R AG VAAG+++GAGACYC+YRL GR ++ E+G+ + K A
Sbjct: 1 MGRTREAGCVAAGVVIGAGACYCVYRLAWGRDENEKIWDEDEESTDTSEIGVETVKGAKT 60
Query: 47 ------GALEEGTSE 55
GA +G SE
Sbjct: 61 NAGAGSGAKLQGDSE 75
>gi|238776801 SVH protein isoform f [Homo sapiens]
Length = 225
Score = 262 bits (669), Expect = 4e-70
Identities = 147/206 (71%), Positives = 154/206 (74%), Gaps = 37/206 (17%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAGALEEGTSEGQLCG 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSA-------------- 46
Query: 61 RSARPQTGGTWESQWSKTSQPEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 120
EDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT
Sbjct: 47 ---------------------EDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 85
Query: 121 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYIS 180
LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIK+ S
Sbjct: 86 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKVDSS 145
Query: 181 QVCEDVFSGPLNSAVQLAGLTLLTNM 206
+ ++ + + L LTL N+
Sbjct: 146 FL--SLYDSHVAKEILLRVLTLFQNI 169
Score = 177 bits (449), Expect = 1e-44
Identities = 93/113 (82%), Positives = 98/113 (86%), Gaps = 3/113 (2%)
Query: 231 NGNTKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNC 290
N + K + L L NLS N E ++ +VDSSFLSLYDSHVAKEILLRVLTLFQNIKNC
Sbjct: 116 NQSIKEKALNALNNLSVN---VENQIKIKVDSSFLSLYDSHVAKEILLRVLTLFQNIKNC 172
Query: 291 LKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 343
LKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI
Sbjct: 173 LKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 225
>gi|7662162 ALEX2 protein [Homo sapiens]
Length = 632
Score = 235 bits (599), Expect = 5e-62
Identities = 138/326 (42%), Positives = 199/326 (61%), Gaps = 24/326 (7%)
Query: 38 LGIRSSKSAGALEEGTSEGQLCGRSARPQTGGTWESQWSKT-----SQPEDLTDG----- 87
+G R A A ++ G + P + ES W+ T S+PE G
Sbjct: 309 MGFRPGDGAAAAAAASANGGQAFLAEVPDSE-EGESGWTDTESDSDSEPETQRRGRGRRP 367
Query: 88 ----------SYDDVLNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIREL 137
D++L L+K+L LL+ ++DP I + AL+TL NNA +S NQ IR+L
Sbjct: 368 VAMQKRPFPYEIDEILGVRDLRKVLALLQKSDDPFIQQVALLTLSNNANYSCNQETIRKL 427
Query: 138 GGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQL 197
GG+PI+AN IN ++ IKEKAL A+NNLS N ENQ ++++Y+++V +D+ + LNSAVQ+
Sbjct: 428 GGLPIIANMINKTDPHIKEKALMAMNNLSENYENQGRLQVYMNKVMDDIMASNLNSAVQV 487
Query: 198 AGLTLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTKVQVLKLLLNLSENPAMTEGLLR 257
GL LTNMT+TND+QH+L + I + F++L G G KV++LK+L N +ENP M + LL
Sbjct: 488 VGLKFLTNMTITNDYQHLLVNSIANFFRLLSQGGGKIKVEILKILSNFAENPDMLKKLLS 547
Query: 258 AQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFL-LHGEE 316
QV +SF SLY+S+V EIL+ LTLF+ I + L+ E + F +GSLF+L
Sbjct: 548 TQVPASFSSLYNSYVESEILINALTLFEIIYDNLRAE--VFNYREFNKGSLFYLCTTSGV 605
Query: 317 CAQKIRALVDHHDAEVKEKVVTIIPK 342
C +KIRAL +HHD VK KV+ ++ K
Sbjct: 606 CVKKIRALANHHDLLVKVKVIKLVNK 631
Score = 43.9 bits (102), Expect = 2e-04
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGR 31
M R AG VAAG+++GAGA YC+Y+ TRGR
Sbjct: 1 MSRVRDAGCVAAGIVIGAGAWYCVYKYTRGR 31
>gi|29540562 ALEX2 protein [Homo sapiens]
Length = 632
Score = 235 bits (599), Expect = 5e-62
Identities = 138/326 (42%), Positives = 199/326 (61%), Gaps = 24/326 (7%)
Query: 38 LGIRSSKSAGALEEGTSEGQLCGRSARPQTGGTWESQWSKT-----SQPEDLTDG----- 87
+G R A A ++ G + P + ES W+ T S+PE G
Sbjct: 309 MGFRPGDGAAAAAAASANGGQAFLAEVPDSE-EGESGWTDTESDSDSEPETQRRGRGRRP 367
Query: 88 ----------SYDDVLNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIREL 137
D++L L+K+L LL+ ++DP I + AL+TL NNA +S NQ IR+L
Sbjct: 368 VAMQKRPFPYEIDEILGVRDLRKVLALLQKSDDPFIQQVALLTLSNNANYSCNQETIRKL 427
Query: 138 GGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQL 197
GG+PI+AN IN ++ IKEKAL A+NNLS N ENQ ++++Y+++V +D+ + LNSAVQ+
Sbjct: 428 GGLPIIANMINKTDPHIKEKALMAMNNLSENYENQGRLQVYMNKVMDDIMASNLNSAVQV 487
Query: 198 AGLTLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTKVQVLKLLLNLSENPAMTEGLLR 257
GL LTNMT+TND+QH+L + I + F++L G G KV++LK+L N +ENP M + LL
Sbjct: 488 VGLKFLTNMTITNDYQHLLVNSIANFFRLLSQGGGKIKVEILKILSNFAENPDMLKKLLS 547
Query: 258 AQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFL-LHGEE 316
QV +SF SLY+S+V EIL+ LTLF+ I + L+ E + F +GSLF+L
Sbjct: 548 TQVPASFSSLYNSYVESEILINALTLFEIIYDNLRAE--VFNYREFNKGSLFYLCTTSGV 605
Query: 317 CAQKIRALVDHHDAEVKEKVVTIIPK 342
C +KIRAL +HHD VK KV+ ++ K
Sbjct: 606 CVKKIRALANHHDLLVKVKVIKLVNK 631
Score = 43.9 bits (102), Expect = 2e-04
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGR 31
M R AG VAAG+++GAGA YC+Y+ TRGR
Sbjct: 1 MSRVRDAGCVAAGIVIGAGAWYCVYKYTRGR 31
>gi|239757861 PREDICTED: similar to armadillo repeat containing,
X-linked 4 [Homo sapiens]
Length = 2382
Score = 205 bits (521), Expect = 5e-53
Identities = 106/253 (41%), Positives = 169/253 (66%), Gaps = 2/253 (0%)
Query: 93 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 152
++ L+KL+ ++E TEDP + E A L N+A +S + ++R +GGI ++ + +N+
Sbjct: 2130 MDPRDLEKLICMIEMTEDPSVHEIANNALYNSADYSYSHEVVRNVGGISVIESLLNNPYP 2189
Query: 153 SIKEKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDH 212
S+++KALNALNN+SV EN K+K Y++QVCED + PLNS VQLAGL L+ ++T+T+++
Sbjct: 2190 SVRQKALNALNNISVAAENHRKVKTYLNQVCEDTVTYPLNSNVQLAGLRLIRHLTITSEY 2249
Query: 213 QHMLHSYITDLFQVLLTGNGNTKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHV 272
QHM+ +YI++ ++L G+G TK VL +LLN S+NP+MT+ LL A +S ++++
Sbjct: 2250 QHMVTNYISEFLRLLTVGSGETKDHVLGMLLNFSKNPSMTKDLLIANAPTSLINIFSKKE 2309
Query: 273 AKEILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLL-HGEECAQKIRAL-VDHHDA 330
KE +L L+LF+NI K Q F++ SL+FL + CA+K+RAL + +D
Sbjct: 2310 TKENILNALSLFENINYHFKRRAKAFTQDKFSKNSLYFLFQRPKACAKKLRALAAECNDP 2369
Query: 331 EVKEKVVTIIPKI 343
EVKE+V +I K+
Sbjct: 2370 EVKERVELLISKL 2382
Score = 43.9 bits (102), Expect = 2e-04
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSS 43
MG + GWV AGL++ AG CY IY+ T+GR + R L S
Sbjct: 93 MGRIQEVGWVTAGLVIWAGTCYYIYKFTKGRAQSVRTLARNGS 135
>gi|41054846 armadillo repeat containing, X-linked 5 [Homo sapiens]
Length = 558
Score = 141 bits (356), Expect = 7e-34
Identities = 84/252 (33%), Positives = 146/252 (57%), Gaps = 1/252 (0%)
Query: 93 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 152
L ++ KL+ LL+ T+DP I E A + +G + A+ Q II ++G ++ N +N+ N
Sbjct: 307 LEPKEFDKLVALLKLTKDPFIHEIATMIMGISPAYPFTQDIIHDVGITVMIENLVNNPNV 366
Query: 153 SIKEKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDH 212
AL+ +++ S + E + YI QVC+ + S PLNS VQLAGL LL ++++ +
Sbjct: 367 KEHPGALSMVDDSSESSEEPKSGESYIHQVCKGIISCPLNSPVQLAGLKLLGHLSIKFED 426
Query: 213 QHMLHSYITDLFQVLLTGNGNTKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHV 272
+++ SYI D +L G+ TK VLK+ LS+N A T L+ A+V SS ++ ++ +
Sbjct: 427 HYVITSYIPDFLTLLNKGSVKTKFYVLKVFSCLSKNHANTRELISAKVLSSLVAPFNKNE 486
Query: 273 AKEILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLL-HGEECAQKIRALVDHHDAE 331
+K +L ++ +F+NI K + L + FT+ L + ++ QK++ L +H D E
Sbjct: 487 SKANILNIIEIFENINFQFKTKAKLFTKEKFTKSELISIFQEAKQFGQKLQDLAEHSDPE 546
Query: 332 VKEKVVTIIPKI 343
V++KV+ +I K+
Sbjct: 547 VRDKVIRLILKL 558
>gi|34147335 armadillo repeat containing, X-linked 6 [Homo sapiens]
Length = 300
Score = 125 bits (315), Expect = 4e-29
Identities = 99/302 (32%), Positives = 151/302 (50%), Gaps = 31/302 (10%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDR--ELGIRSSKSAGALEE------- 51
MG R GW+AAGL++GAGACYC+Y+LT GR ++ E G L+E
Sbjct: 1 MGRAREVGWMAAGLMIGAGACYCVYKLTIGRDDSEKLEEEGEEEWDDDQELDEEEPDIWF 60
Query: 52 --------------GTSEGQLCGRSARPQTGGTWESQWSKTSQPEDLTDGSYDDVLNAEQ 97
T G G RP GG +P + + +A+
Sbjct: 61 DFETMARPWTEDGDWTEPGAPGGTEDRPSGGGKANRAHPIKQRPFPY---EHKNTWSAQN 117
Query: 98 LQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEK 157
+ +L+ ++ I + L +A F +Q I L + + N + +++E
Sbjct: 118 CKNGSCVLDLSKCLFIQGKLLFAEPKDAGFPFSQDINSHLASLSMARNTSPTPDPTVRE- 176
Query: 158 ALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHMLH 217
AL A +NL+ ++E+Q +IK+YI++VC + S NS +Q AGL LL +MTV N +ML
Sbjct: 177 ALCAPDNLNASIESQGQIKMYINEVCRETVSRCCNSFLQQAGLNLLISMTVIN---NMLA 233
Query: 218 SYITDL-FQVLLTGNGNTKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEI 276
+DL F ++ G+G KVQVLK L+ LSE P + L+ AQ+ SF+SL+ + +EI
Sbjct: 234 KSASDLKFPLISEGSGCAKVQVLKPLMGLSEKPVLAGELVGAQMLFSFMSLFIRNGNREI 293
Query: 277 LL 278
LL
Sbjct: 294 LL 295
>gi|57546906 armadillo repeat containing, X-linked 6 [Homo sapiens]
Length = 300
Score = 125 bits (315), Expect = 4e-29
Identities = 99/302 (32%), Positives = 151/302 (50%), Gaps = 31/302 (10%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDR--ELGIRSSKSAGALEE------- 51
MG R GW+AAGL++GAGACYC+Y+LT GR ++ E G L+E
Sbjct: 1 MGRAREVGWMAAGLMIGAGACYCVYKLTIGRDDSEKLEEEGEEEWDDDQELDEEEPDIWF 60
Query: 52 --------------GTSEGQLCGRSARPQTGGTWESQWSKTSQPEDLTDGSYDDVLNAEQ 97
T G G RP GG +P + + +A+
Sbjct: 61 DFETMARPWTEDGDWTEPGAPGGTEDRPSGGGKANRAHPIKQRPFPY---EHKNTWSAQN 117
Query: 98 LQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEK 157
+ +L+ ++ I + L +A F +Q I L + + N + +++E
Sbjct: 118 CKNGSCVLDLSKCLFIQGKLLFAEPKDAGFPFSQDINSHLASLSMARNTSPTPDPTVRE- 176
Query: 158 ALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHMLH 217
AL A +NL+ ++E+Q +IK+YI++VC + S NS +Q AGL LL +MTV N +ML
Sbjct: 177 ALCAPDNLNASIESQGQIKMYINEVCRETVSRCCNSFLQQAGLNLLISMTVIN---NMLA 233
Query: 218 SYITDL-FQVLLTGNGNTKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEI 276
+DL F ++ G+G KVQVLK L+ LSE P + L+ AQ+ SF+SL+ + +EI
Sbjct: 234 KSASDLKFPLISEGSGCAKVQVLKPLMGLSEKPVLAGELVGAQMLFSFMSLFIRNGNREI 293
Query: 277 LL 278
LL
Sbjct: 294 LL 295
>gi|51702248 G protein-coupled receptor associated sorting protein 2
[Homo sapiens]
Length = 838
Score = 123 bits (309), Expect = 2e-28
Identities = 71/250 (28%), Positives = 139/250 (55%), Gaps = 12/250 (4%)
Query: 93 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 152
+ +E+ ++ L L++ DP I E + I +G +A + IR+ G + ++ +N+ +
Sbjct: 593 IGSEEFEEFLLLMDKIRDPFIHEISKIAMGMRSASQFTRDFIRDSGVVSLIETLLNYPSS 652
Query: 153 SIKEKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDH 212
++ L + +++ N I+ +I QVCE+ + ++S QL G+ +L ++T+T D+
Sbjct: 653 RVRTSFLENMIHMAPPYPNLNMIETFICQVCEETLAHSVDSLEQLTGIRMLRHLTMTIDY 712
Query: 213 QHMLHSYITDLFQVLLTGNGNTKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHV 272
++ +Y++ +L T N TK VLK+LLNLSENPA+ + L A+ S F+ L++
Sbjct: 713 HTLIANYMSGFLSLLTTANARTKFHVLKMLLNLSENPAVAKKLFSAKALSIFVGLFNIEE 772
Query: 273 AKEILLRVLTLFQNIKNCLK------IEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVD 326
+ + V+ +FQNI N +K I+ +++P + F EE A++++A +D
Sbjct: 773 TNDNIQIVIKMFQNISNIIKSGKMSLIDDDFSLEPLISAFREF-----EELAKQLQAQID 827
Query: 327 H-HDAEVKEK 335
+ +D EV ++
Sbjct: 828 NQNDPEVGQQ 837
>gi|19923967 G protein-coupled receptor associated sorting protein 2
[Homo sapiens]
Length = 838
Score = 123 bits (309), Expect = 2e-28
Identities = 71/250 (28%), Positives = 139/250 (55%), Gaps = 12/250 (4%)
Query: 93 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 152
+ +E+ ++ L L++ DP I E + I +G +A + IR+ G + ++ +N+ +
Sbjct: 593 IGSEEFEEFLLLMDKIRDPFIHEISKIAMGMRSASQFTRDFIRDSGVVSLIETLLNYPSS 652
Query: 153 SIKEKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDH 212
++ L + +++ N I+ +I QVCE+ + ++S QL G+ +L ++T+T D+
Sbjct: 653 RVRTSFLENMIHMAPPYPNLNMIETFICQVCEETLAHSVDSLEQLTGIRMLRHLTMTIDY 712
Query: 213 QHMLHSYITDLFQVLLTGNGNTKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHV 272
++ +Y++ +L T N TK VLK+LLNLSENPA+ + L A+ S F+ L++
Sbjct: 713 HTLIANYMSGFLSLLTTANARTKFHVLKMLLNLSENPAVAKKLFSAKALSIFVGLFNIEE 772
Query: 273 AKEILLRVLTLFQNIKNCLK------IEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVD 326
+ + V+ +FQNI N +K I+ +++P + F EE A++++A +D
Sbjct: 773 TNDNIQIVIKMFQNISNIIKSGKMSLIDDDFSLEPLISAFREF-----EELAKQLQAQID 827
Query: 327 H-HDAEVKEK 335
+ +D EV ++
Sbjct: 828 NQNDPEVGQQ 837
>gi|150378528 G protein-coupled receptor associated sorting protein 1
[Homo sapiens]
Length = 1395
Score = 120 bits (302), Expect = 1e-27
Identities = 63/202 (31%), Positives = 116/202 (57%)
Query: 93 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 152
+ +E+ ++LL L+E DP I E + I +G +A + IR+ G + ++ +N+ +
Sbjct: 1151 IGSEEFEELLLLMEKIRDPFIHEISKIAMGMRSASQFTRDFIRDSGVVSLIETLLNYPSS 1210
Query: 153 SIKEKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDH 212
++ L + ++ N I+ YI +VCE+ + ++S QL+G+ ++ ++T T D+
Sbjct: 1211 RVRTSFLENMIRMAPPYPNLNIIQTYICKVCEETLAYSVDSPEQLSGIRMIRHLTTTTDY 1270
Query: 213 QHMLHSYITDLFQVLLTGNGNTKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHV 272
++ +Y++ +L TGN T+ VLK+LLNLSEN MT+ LL A+ S F+ L++
Sbjct: 1271 HTLVANYMSGFLSLLATGNAKTRFHVLKMLLNLSENLFMTKELLSAEAVSEFIGLFNREE 1330
Query: 273 AKEILLRVLTLFQNIKNCLKIE 294
+ + VL +F+NI N +K E
Sbjct: 1331 TNDNIQIVLAIFENIGNNIKKE 1352
>gi|150378489 G protein-coupled receptor associated sorting protein 1
[Homo sapiens]
Length = 1395
Score = 120 bits (302), Expect = 1e-27
Identities = 63/202 (31%), Positives = 116/202 (57%)
Query: 93 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 152
+ +E+ ++LL L+E DP I E + I +G +A + IR+ G + ++ +N+ +
Sbjct: 1151 IGSEEFEELLLLMEKIRDPFIHEISKIAMGMRSASQFTRDFIRDSGVVSLIETLLNYPSS 1210
Query: 153 SIKEKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDH 212
++ L + ++ N I+ YI +VCE+ + ++S QL+G+ ++ ++T T D+
Sbjct: 1211 RVRTSFLENMIRMAPPYPNLNIIQTYICKVCEETLAYSVDSPEQLSGIRMIRHLTTTTDY 1270
Query: 213 QHMLHSYITDLFQVLLTGNGNTKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHV 272
++ +Y++ +L TGN T+ VLK+LLNLSEN MT+ LL A+ S F+ L++
Sbjct: 1271 HTLVANYMSGFLSLLATGNAKTRFHVLKMLLNLSENLFMTKELLSAEAVSEFIGLFNREE 1330
Query: 273 AKEILLRVLTLFQNIKNCLKIE 294
+ + VL +F+NI N +K E
Sbjct: 1331 TNDNIQIVLAIFENIGNNIKKE 1352
>gi|103472136 G protein-coupled receptor associated sorting protein 1
[Homo sapiens]
Length = 1395
Score = 120 bits (302), Expect = 1e-27
Identities = 63/202 (31%), Positives = 116/202 (57%)
Query: 93 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 152
+ +E+ ++LL L+E DP I E + I +G +A + IR+ G + ++ +N+ +
Sbjct: 1151 IGSEEFEELLLLMEKIRDPFIHEISKIAMGMRSASQFTRDFIRDSGVVSLIETLLNYPSS 1210
Query: 153 SIKEKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDH 212
++ L + ++ N I+ YI +VCE+ + ++S QL+G+ ++ ++T T D+
Sbjct: 1211 RVRTSFLENMIRMAPPYPNLNIIQTYICKVCEETLAYSVDSPEQLSGIRMIRHLTTTTDY 1270
Query: 213 QHMLHSYITDLFQVLLTGNGNTKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHV 272
++ +Y++ +L TGN T+ VLK+LLNLSEN MT+ LL A+ S F+ L++
Sbjct: 1271 HTLVANYMSGFLSLLATGNAKTRFHVLKMLLNLSENLFMTKELLSAEAVSEFIGLFNREE 1330
Query: 273 AKEILLRVLTLFQNIKNCLKIE 294
+ + VL +F+NI N +K E
Sbjct: 1331 TNDNIQIVLAIFENIGNNIKKE 1352
>gi|216547715 basic helix-loop-helix domain containing, class B, 9
[Homo sapiens]
Length = 547
Score = 112 bits (281), Expect = 4e-25
Identities = 62/200 (31%), Positives = 119/200 (59%), Gaps = 1/200 (0%)
Query: 93 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 152
+++E+ +KL+ LL+ST DP+I + A I +G + Q I E+G + ++ + ++ +
Sbjct: 320 MDSEEFEKLVSLLKSTTDPLIHKIARIAMGVHNVHPFAQEFINEVGVVTLIESLLSFPSP 379
Query: 153 SIKEKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDH 212
+++K + LN S + E Q KI++++ +C++ S PLNS Q +GL +L +T H
Sbjct: 380 EMRKKTVITLNPPSGD-ERQRKIELHVKHMCKETMSFPLNSPGQQSGLKILGQLTTDFVH 438
Query: 213 QHMLHSYITDLFQVLLTGNGNTKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHV 272
+++ +Y ++LF +L +GN T+ VLKLLLN+SENP ++ + ++ +++
Sbjct: 439 HYIVANYFSELFHLLSSGNCKTRNLVLKLLLNMSENPTAARDMINMKALAALKLIFNQKE 498
Query: 273 AKEILLRVLTLFQNIKNCLK 292
AK L+ + +F NIK ++
Sbjct: 499 AKANLVSGVAIFINIKEHIR 518
>gi|216547682 basic helix-loop-helix domain containing, class B, 9
[Homo sapiens]
Length = 547
Score = 112 bits (281), Expect = 4e-25
Identities = 62/200 (31%), Positives = 119/200 (59%), Gaps = 1/200 (0%)
Query: 93 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 152
+++E+ +KL+ LL+ST DP+I + A I +G + Q I E+G + ++ + ++ +
Sbjct: 320 MDSEEFEKLVSLLKSTTDPLIHKIARIAMGVHNVHPFAQEFINEVGVVTLIESLLSFPSP 379
Query: 153 SIKEKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDH 212
+++K + LN S + E Q KI++++ +C++ S PLNS Q +GL +L +T H
Sbjct: 380 EMRKKTVITLNPPSGD-ERQRKIELHVKHMCKETMSFPLNSPGQQSGLKILGQLTTDFVH 438
Query: 213 QHMLHSYITDLFQVLLTGNGNTKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHV 272
+++ +Y ++LF +L +GN T+ VLKLLLN+SENP ++ + ++ +++
Sbjct: 439 HYIVANYFSELFHLLSSGNCKTRNLVLKLLLNMSENPTAARDMINMKALAALKLIFNQKE 498
Query: 273 AKEILLRVLTLFQNIKNCLK 292
AK L+ + +F NIK ++
Sbjct: 499 AKANLVSGVAIFINIKEHIR 518
>gi|216547672 basic helix-loop-helix domain containing, class B, 9
[Homo sapiens]
Length = 547
Score = 112 bits (281), Expect = 4e-25
Identities = 62/200 (31%), Positives = 119/200 (59%), Gaps = 1/200 (0%)
Query: 93 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 152
+++E+ +KL+ LL+ST DP+I + A I +G + Q I E+G + ++ + ++ +
Sbjct: 320 MDSEEFEKLVSLLKSTTDPLIHKIARIAMGVHNVHPFAQEFINEVGVVTLIESLLSFPSP 379
Query: 153 SIKEKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDH 212
+++K + LN S + E Q KI++++ +C++ S PLNS Q +GL +L +T H
Sbjct: 380 EMRKKTVITLNPPSGD-ERQRKIELHVKHMCKETMSFPLNSPGQQSGLKILGQLTTDFVH 438
Query: 213 QHMLHSYITDLFQVLLTGNGNTKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHV 272
+++ +Y ++LF +L +GN T+ VLKLLLN+SENP ++ + ++ +++
Sbjct: 439 HYIVANYFSELFHLLSSGNCKTRNLVLKLLLNMSENPTAARDMINMKALAALKLIFNQKE 498
Query: 273 AKEILLRVLTLFQNIKNCLK 292
AK L+ + +F NIK ++
Sbjct: 499 AKANLVSGVAIFINIKEHIR 518
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.134 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,054,607
Number of Sequences: 37866
Number of extensions: 493229
Number of successful extensions: 1694
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 1562
Number of HSP's gapped (non-prelim): 131
length of query: 343
length of database: 18,247,518
effective HSP length: 103
effective length of query: 240
effective length of database: 14,347,320
effective search space: 3443356800
effective search space used: 3443356800
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.