Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 31083243
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|31083243 gamma isoform of regulatory subunit B56, protein
phosphatase 2A isoform c [Homo sapiens]
(449 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|31083243 gamma isoform of regulatory subunit B56, protein pho... 910 0.0
gi|31083236 gamma isoform of regulatory subunit B56, protein pho... 899 0.0
gi|31083259 gamma isoform of regulatory subunit B56, protein pho... 898 0.0
gi|240849359 gamma isoform of regulatory subunit B56, protein ph... 839 0.0
gi|240849353 gamma isoform of regulatory subunit B56, protein ph... 838 0.0
gi|5453954 delta isoform of regulatory subunit B56, protein phos... 758 0.0
gi|31083280 delta isoform of regulatory subunit B56, protein pho... 752 0.0
gi|31083288 delta isoform of regulatory subunit B56, protein pho... 751 0.0
gi|5453956 epsilon isoform of regulatory subunit B56, protein ph... 615 e-176
gi|5453950 protein phosphatase 2, regulatory subunit B (B56), al... 609 e-174
gi|5453952 beta isoform of regulatory subunit B56, protein phosp... 591 e-169
gi|4505727 peroxisomal biogenesis factor 3 [Homo sapiens] 34 0.31
gi|222080092 WD repeat domain 91 [Homo sapiens] 31 2.0
gi|198442844 dynein, axonemal, heavy chain 10 [Homo sapiens] 31 2.6
gi|110611228 utrophin [Homo sapiens] 30 3.4
gi|163792208 Rho guanine exchange factor 16 [Homo sapiens] 30 4.4
gi|154350213 hypothetical protein LOC79591 [Homo sapiens] 30 5.8
gi|218505703 von Willebrand factor A domain containing 3A [Homo ... 29 7.6
gi|112807226 hypothetical protein LOC91748 [Homo sapiens] 29 7.6
gi|44890062 hypothetical protein LOC91748 [Homo sapiens] 29 7.6
gi|5032281 dystrophin Dp427c isoform [Homo sapiens] 29 9.9
gi|5032295 dystrophin Dp116 isoform [Homo sapiens] 29 9.9
gi|5032291 dystrophin Dp260-2 isoform [Homo sapiens] 29 9.9
gi|150036268 dystrophin Dp260-1 isoform [Homo sapiens] 29 9.9
gi|5032315 dystrophin Dp427p2 isoform [Homo sapiens] 29 9.9
gi|5032287 dystrophin Dp427p1 isoform [Homo sapiens] 29 9.9
gi|5032309 dystrophin Dp140b isoform [Homo sapiens] 29 9.9
gi|5032299 dystrophin Dp71b isoform [Homo sapiens] 29 9.9
gi|5032297 dystrophin Dp71 isoform [Homo sapiens] 29 9.9
gi|5032293 dystrophin Dp140 isoform [Homo sapiens] 29 9.9
>gi|31083243 gamma isoform of regulatory subunit B56, protein
phosphatase 2A isoform c [Homo sapiens]
Length = 449
Score = 910 bits (2352), Expect = 0.0
Identities = 449/449 (100%), Positives = 449/449 (100%)
Query: 1 MLTCNKAGSRMVVDAANSNGPFQPVVLLHIRDVPPADQEKLFIQKLRQCCVLFDFVSDPL 60
MLTCNKAGSRMVVDAANSNGPFQPVVLLHIRDVPPADQEKLFIQKLRQCCVLFDFVSDPL
Sbjct: 1 MLTCNKAGSRMVVDAANSNGPFQPVVLLHIRDVPPADQEKLFIQKLRQCCVLFDFVSDPL 60
Query: 61 SDLKWKEVKRAALSEMVEYITHNRNVITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDP 120
SDLKWKEVKRAALSEMVEYITHNRNVITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDP
Sbjct: 61 SDLKWKEVKRAALSEMVEYITHNRNVITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDP 120
Query: 121 EEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERD 180
EEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERD
Sbjct: 121 EEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERD 180
Query: 181 FLKTTLHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLK 240
FLKTTLHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLK
Sbjct: 181 FLKTTLHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLK 240
Query: 241 EEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPK 300
EEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPK
Sbjct: 241 EEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPK 300
Query: 301 EVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLIS 360
EVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLIS
Sbjct: 301 EVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLIS 360
Query: 361 DNAAKILPIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFKAEKLKEK 420
DNAAKILPIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFKAEKLKEK
Sbjct: 361 DNAAKILPIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFKAEKLKEK 420
Query: 421 LKMKEREEAWVKIENLAKANPQVLKKRIT 449
LKMKEREEAWVKIENLAKANPQVLKKRIT
Sbjct: 421 LKMKEREEAWVKIENLAKANPQVLKKRIT 449
>gi|31083236 gamma isoform of regulatory subunit B56, protein
phosphatase 2A isoform b [Homo sapiens]
Length = 485
Score = 899 bits (2323), Expect = 0.0
Identities = 443/445 (99%), Positives = 443/445 (99%)
Query: 1 MLTCNKAGSRMVVDAANSNGPFQPVVLLHIRDVPPADQEKLFIQKLRQCCVLFDFVSDPL 60
MLTCNKAGSRMVVDAANSNGPFQPVVLLHIRDVPPADQEKLFIQKLRQCCVLFDFVSDPL
Sbjct: 1 MLTCNKAGSRMVVDAANSNGPFQPVVLLHIRDVPPADQEKLFIQKLRQCCVLFDFVSDPL 60
Query: 61 SDLKWKEVKRAALSEMVEYITHNRNVITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDP 120
SDLKWKEVKRAALSEMVEYITHNRNVITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDP
Sbjct: 61 SDLKWKEVKRAALSEMVEYITHNRNVITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDP 120
Query: 121 EEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERD 180
EEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERD
Sbjct: 121 EEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERD 180
Query: 181 FLKTTLHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLK 240
FLKTTLHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLK
Sbjct: 181 FLKTTLHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLK 240
Query: 241 EEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPK 300
EEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPK
Sbjct: 241 EEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPK 300
Query: 301 EVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLIS 360
EVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLIS
Sbjct: 301 EVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLIS 360
Query: 361 DNAAKILPIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFKAEKLKEK 420
DNAAKILPIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFKAEKLKEK
Sbjct: 361 DNAAKILPIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFKAEKLKEK 420
Query: 421 LKMKEREEAWVKIENLAKANPQVLK 445
LKMKEREEAWVKIENLAKANPQ K
Sbjct: 421 LKMKEREEAWVKIENLAKANPQAQK 445
>gi|31083259 gamma isoform of regulatory subunit B56, protein
phosphatase 2A isoform a [Homo sapiens]
Length = 524
Score = 898 bits (2320), Expect = 0.0
Identities = 442/442 (100%), Positives = 442/442 (100%)
Query: 1 MLTCNKAGSRMVVDAANSNGPFQPVVLLHIRDVPPADQEKLFIQKLRQCCVLFDFVSDPL 60
MLTCNKAGSRMVVDAANSNGPFQPVVLLHIRDVPPADQEKLFIQKLRQCCVLFDFVSDPL
Sbjct: 1 MLTCNKAGSRMVVDAANSNGPFQPVVLLHIRDVPPADQEKLFIQKLRQCCVLFDFVSDPL 60
Query: 61 SDLKWKEVKRAALSEMVEYITHNRNVITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDP 120
SDLKWKEVKRAALSEMVEYITHNRNVITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDP
Sbjct: 61 SDLKWKEVKRAALSEMVEYITHNRNVITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDP 120
Query: 121 EEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERD 180
EEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERD
Sbjct: 121 EEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERD 180
Query: 181 FLKTTLHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLK 240
FLKTTLHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLK
Sbjct: 181 FLKTTLHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLK 240
Query: 241 EEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPK 300
EEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPK
Sbjct: 241 EEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPK 300
Query: 301 EVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLIS 360
EVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLIS
Sbjct: 301 EVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLIS 360
Query: 361 DNAAKILPIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFKAEKLKEK 420
DNAAKILPIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFKAEKLKEK
Sbjct: 361 DNAAKILPIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFKAEKLKEK 420
Query: 421 LKMKEREEAWVKIENLAKANPQ 442
LKMKEREEAWVKIENLAKANPQ
Sbjct: 421 LKMKEREEAWVKIENLAKANPQ 442
>gi|240849359 gamma isoform of regulatory subunit B56, protein
phosphatase 2A isoform f [Homo sapiens]
Length = 540
Score = 839 bits (2168), Expect = 0.0
Identities = 416/431 (96%), Positives = 421/431 (97%), Gaps = 2/431 (0%)
Query: 15 AANSNGPFQPVVLLHIRDVPPADQEKLFIQKLRQCCVLFDFVSDPLSDLKWKEVKRAALS 74
+A++N Q L ++DVPPADQEKLFIQKLRQCCVLFDFVSDPLSDLKWKEVKRAALS
Sbjct: 72 SASNNRELQK--LPSLKDVPPADQEKLFIQKLRQCCVLFDFVSDPLSDLKWKEVKRAALS 129
Query: 75 EMVEYITHNRNVITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHL 134
EMVEYITHNRNVITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHL
Sbjct: 130 EMVEYITHNRNVITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHL 189
Query: 135 QLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFL 194
QLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFL
Sbjct: 190 QLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFL 249
Query: 195 GLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPL 254
GLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPL
Sbjct: 250 GLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPL 309
Query: 255 HKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDV 314
HKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDV
Sbjct: 310 HKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDV 369
Query: 315 IEPSEFVKIMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIMFPSL 374
IEPSEFVKIMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIMFPSL
Sbjct: 370 IEPSEFVKIMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIMFPSL 429
Query: 375 YRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFKAEKLKEKLKMKEREEAWVKIE 434
YRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFKAEKLKEKLKMKEREEAWVKIE
Sbjct: 430 YRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFKAEKLKEKLKMKEREEAWVKIE 489
Query: 435 NLAKANPQVLK 445
NLAKANPQ K
Sbjct: 490 NLAKANPQAQK 500
>gi|240849353 gamma isoform of regulatory subunit B56, protein
phosphatase 2A isoform e [Homo sapiens]
Length = 555
Score = 838 bits (2165), Expect = 0.0
Identities = 412/412 (100%), Positives = 412/412 (100%)
Query: 31 RDVPPADQEKLFIQKLRQCCVLFDFVSDPLSDLKWKEVKRAALSEMVEYITHNRNVITEP 90
RDVPPADQEKLFIQKLRQCCVLFDFVSDPLSDLKWKEVKRAALSEMVEYITHNRNVITEP
Sbjct: 62 RDVPPADQEKLFIQKLRQCCVLFDFVSDPLSDLKWKEVKRAALSEMVEYITHNRNVITEP 121
Query: 91 IYPEVVHMFAVNMFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDF 150
IYPEVVHMFAVNMFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDF
Sbjct: 122 IYPEVVHMFAVNMFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDF 181
Query: 151 QPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFYR 210
QPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFYR
Sbjct: 182 QPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFYR 241
Query: 211 FIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQLAYC 270
FIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQLAYC
Sbjct: 242 FIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQLAYC 301
Query: 271 VVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFRQ 330
VVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFRQ
Sbjct: 302 VVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFRQ 361
Query: 331 LAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIMFPSLYRNSKTHWNKTIHGLI 390
LAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIMFPSLYRNSKTHWNKTIHGLI
Sbjct: 362 LAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIMFPSLYRNSKTHWNKTIHGLI 421
Query: 391 YNALKLFMEMNQKLFDDCTQQFKAEKLKEKLKMKEREEAWVKIENLAKANPQ 442
YNALKLFMEMNQKLFDDCTQQFKAEKLKEKLKMKEREEAWVKIENLAKANPQ
Sbjct: 422 YNALKLFMEMNQKLFDDCTQQFKAEKLKEKLKMKEREEAWVKIENLAKANPQ 473
>gi|5453954 delta isoform of regulatory subunit B56, protein
phosphatase 2A isoform 1 [Homo sapiens]
Length = 602
Score = 758 bits (1956), Expect = 0.0
Identities = 363/413 (87%), Positives = 395/413 (95%)
Query: 30 IRDVPPADQEKLFIQKLRQCCVLFDFVSDPLSDLKWKEVKRAALSEMVEYITHNRNVITE 89
++D P ++E+LFIQKLRQCCVLFDFVSDPLSDLK+KEVKRA L+EMVEYITH+R+V+TE
Sbjct: 106 LKDSPTQEREELFIQKLRQCCVLFDFVSDPLSDLKFKEVKRAGLNEMVEYITHSRDVVTE 165
Query: 90 PIYPEVVHMFAVNMFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPD 149
IYPE V MF+VN+FRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPD
Sbjct: 166 AIYPEAVTMFSVNLFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPD 225
Query: 150 FQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFY 209
FQPNIAKKYIDQKFVL LL+LFDSEDPRERDFLKT LHRIYGKFLGLRAYIR+QIN+IFY
Sbjct: 226 FQPNIAKKYIDQKFVLALLDLFDSEDPRERDFLKTILHRIYGKFLGLRAYIRRQINHIFY 285
Query: 210 RFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQLAY 269
RFIYETEHHNGIAELLEILGSIINGFALPLKEEHK+FL++VLLPLHKVKSLSVYHPQLAY
Sbjct: 286 RFIYETEHHNGIAELLEILGSIINGFALPLKEEHKMFLIRVLLPLHKVKSLSVYHPQLAY 345
Query: 270 CVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFR 329
CVVQFLEK+S+LTEPV++ LLK+WPKTHSPKEVMFLNELEEILDVIEPSEF K+MEPLFR
Sbjct: 346 CVVQFLEKESSLTEPVIVGLLKFWPKTHSPKEVMFLNELEEILDVIEPSEFSKVMEPLFR 405
Query: 330 QLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIMFPSLYRNSKTHWNKTIHGL 389
QLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAA++LPIMFP+LYRNSK+HWNKTIHGL
Sbjct: 406 QLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAARVLPIMFPALYRNSKSHWNKTIHGL 465
Query: 390 IYNALKLFMEMNQKLFDDCTQQFKAEKLKEKLKMKEREEAWVKIENLAKANPQ 442
IYNALKLFMEMNQKLFDDCTQQ+KAEK K + +MKEREE W KIE LA+ NPQ
Sbjct: 466 IYNALKLFMEMNQKLFDDCTQQYKAEKQKGRFRMKEREEMWQKIEELARLNPQ 518
>gi|31083280 delta isoform of regulatory subunit B56, protein
phosphatase 2A isoform 2 [Homo sapiens]
Length = 570
Score = 752 bits (1941), Expect = 0.0
Identities = 364/427 (85%), Positives = 397/427 (92%)
Query: 16 ANSNGPFQPVVLLHIRDVPPADQEKLFIQKLRQCCVLFDFVSDPLSDLKWKEVKRAALSE 75
+NS P + + P +++LFIQKLRQCCVLFDFVSDPLSDLK+KEVKRA L+E
Sbjct: 60 SNSTPPPTQLSKIKYSGGPQIVKKELFIQKLRQCCVLFDFVSDPLSDLKFKEVKRAGLNE 119
Query: 76 MVEYITHNRNVITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQ 135
MVEYITH+R+V+TE IYPE V MF+VN+FRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQ
Sbjct: 120 MVEYITHSRDVVTEAIYPEAVTMFSVNLFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQ 179
Query: 136 LVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFLG 195
LVYEFFLRFLESPDFQPNIAKKYIDQKFVL LL+LFDSEDPRERDFLKT LHRIYGKFLG
Sbjct: 180 LVYEFFLRFLESPDFQPNIAKKYIDQKFVLALLDLFDSEDPRERDFLKTILHRIYGKFLG 239
Query: 196 LRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLH 255
LRAYIR+QIN+IFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHK+FL++VLLPLH
Sbjct: 240 LRAYIRRQINHIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKMFLIRVLLPLH 299
Query: 256 KVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVI 315
KVKSLSVYHPQLAYCVVQFLEK+S+LTEPV++ LLK+WPKTHSPKEVMFLNELEEILDVI
Sbjct: 300 KVKSLSVYHPQLAYCVVQFLEKESSLTEPVIVGLLKFWPKTHSPKEVMFLNELEEILDVI 359
Query: 316 EPSEFVKIMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIMFPSLY 375
EPSEF K+MEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAA++LPIMFP+LY
Sbjct: 360 EPSEFSKVMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAARVLPIMFPALY 419
Query: 376 RNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFKAEKLKEKLKMKEREEAWVKIEN 435
RNSK+HWNKTIHGLIYNALKLFMEMNQKLFDDCTQQ+KAEK K + +MKEREE W KIE
Sbjct: 420 RNSKSHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQYKAEKQKGRFRMKEREEMWQKIEE 479
Query: 436 LAKANPQ 442
LA+ NPQ
Sbjct: 480 LARLNPQ 486
>gi|31083288 delta isoform of regulatory subunit B56, protein
phosphatase 2A isoform 3 [Homo sapiens]
Length = 496
Score = 751 bits (1938), Expect = 0.0
Identities = 360/405 (88%), Positives = 390/405 (96%)
Query: 38 QEKLFIQKLRQCCVLFDFVSDPLSDLKWKEVKRAALSEMVEYITHNRNVITEPIYPEVVH 97
+++LFIQKLRQCCVLFDFVSDPLSDLK+KEVKRA L+EMVEYITH+R+V+TE IYPE V
Sbjct: 8 EKELFIQKLRQCCVLFDFVSDPLSDLKFKEVKRAGLNEMVEYITHSRDVVTEAIYPEAVT 67
Query: 98 MFAVNMFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKK 157
MF+VN+FRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKK
Sbjct: 68 MFSVNLFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKK 127
Query: 158 YIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFYRFIYETEH 217
YIDQKFVL LL+LFDSEDPRERDFLKT LHRIYGKFLGLRAYIR+QIN+IFYRFIYETEH
Sbjct: 128 YIDQKFVLALLDLFDSEDPRERDFLKTILHRIYGKFLGLRAYIRRQINHIFYRFIYETEH 187
Query: 218 HNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEK 277
HNGIAELLEILGSIINGFALPLKEEHK+FL++VLLPLHKVKSLSVYHPQLAYCVVQFLEK
Sbjct: 188 HNGIAELLEILGSIINGFALPLKEEHKMFLIRVLLPLHKVKSLSVYHPQLAYCVVQFLEK 247
Query: 278 DSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSS 337
+S+LTEPV++ LLK+WPKTHSPKEVMFLNELEEILDVIEPSEF K+MEPLFRQLAKCVSS
Sbjct: 248 ESSLTEPVIVGLLKFWPKTHSPKEVMFLNELEEILDVIEPSEFSKVMEPLFRQLAKCVSS 307
Query: 338 PHFQVAERALYYWNNEYIMSLISDNAAKILPIMFPSLYRNSKTHWNKTIHGLIYNALKLF 397
PHFQVAERALYYWNNEYIMSLISDNAA++LPIMFP+LYRNSK+HWNKTIHGLIYNALKLF
Sbjct: 308 PHFQVAERALYYWNNEYIMSLISDNAARVLPIMFPALYRNSKSHWNKTIHGLIYNALKLF 367
Query: 398 MEMNQKLFDDCTQQFKAEKLKEKLKMKEREEAWVKIENLAKANPQ 442
MEMNQKLFDDCTQQ+KAEK K + +MKEREE W KIE LA+ NPQ
Sbjct: 368 MEMNQKLFDDCTQQYKAEKQKGRFRMKEREEMWQKIEELARLNPQ 412
>gi|5453956 epsilon isoform of regulatory subunit B56, protein
phosphatase 2A [Homo sapiens]
Length = 467
Score = 615 bits (1586), Expect = e-176
Identities = 300/416 (72%), Positives = 353/416 (84%), Gaps = 4/416 (0%)
Query: 21 PFQPVVLLHIRDVPPADQEKLFIQKLRQCCVLFDFVSDPLSDLKWKEVKRAALSEMVEYI 80
P + L ++DVP ++Q +LF++KL+QCCV+FDF+ D LSDLK KE KR+ L+E+V+YI
Sbjct: 42 PIELTPLPLLKDVPSSEQPELFLKKLQQCCVIFDFM-DTLSDLKMKEYKRSTLNELVDYI 100
Query: 81 THNRNVITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEF 140
T +R +TE YPEVV M + N+FRTLPPS + EFDPEEDEPTLEA+WPHLQLVYEF
Sbjct: 101 TISRGCLTEQTYPEVVRMVSCNIFRTLPPSDSN---EFDPEEDEPTLEASWPHLQLVYEF 157
Query: 141 FLRFLESPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYI 200
F+RFLES +FQP+IAKKYIDQKFVLQLLELFDSEDPRERD+LKT LHRIYGKFLGLRA+I
Sbjct: 158 FIRFLESQEFQPSIAKKYIDQKFVLQLLELFDSEDPRERDYLKTVLHRIYGKFLGLRAFI 217
Query: 201 RKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSL 260
RKQINNIF RF+YETEH NG+AELLEILGSIINGFALPLK EHK FL+KVL+PLH V+SL
Sbjct: 218 RKQINNIFLRFVYETEHFNGVAELLEILGSIINGFALPLKAEHKQFLVKVLIPLHTVRSL 277
Query: 261 SVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEF 320
S++H QLAYC+VQFLEKD +LTEPV+ L+K+WPKT S KEVMFL ELEEILDVIEPS+F
Sbjct: 278 SLFHAQLAYCIVQFLEKDPSLTEPVIRGLMKFWPKTCSQKEVMFLGELEEILDVIEPSQF 337
Query: 321 VKIMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIMFPSLYRNSKT 380
VKI EPLF+Q+AKCVSSPHFQVAERALYYWNNEYIMSLI +N+ ILPIMF SLYR SK
Sbjct: 338 VKIQEPLFKQIAKCVSSPHFQVAERALYYWNNEYIMSLIEENSNVILPIMFSSLYRISKE 397
Query: 381 HWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFKAEKLKEKLKMKEREEAWVKIENL 436
HWN I L+YN LK FMEMN +FD+ T +K+++ +EK K KEREE W K+E+L
Sbjct: 398 HWNPAIVALVYNVLKAFMEMNSTMFDELTATYKSDRQREKKKEKEREELWKKLEDL 453
>gi|5453950 protein phosphatase 2, regulatory subunit B (B56), alpha
isoform [Homo sapiens]
Length = 486
Score = 609 bits (1570), Expect = e-174
Identities = 296/410 (72%), Positives = 345/410 (84%), Gaps = 4/410 (0%)
Query: 27 LLHIRDVPPADQEKLFIQKLRQCCVLFDFVSDPLSDLKWKEVKRAALSEMVEYITHNRNV 86
L ++D +Q++LF QKL+QCC+LFDF+ D +SDLK KE+KRA L+E+VEY++ NR V
Sbjct: 56 LPQLKDATSNEQQELFCQKLQQCCILFDFM-DSVSDLKSKEIKRATLNELVEYVSTNRGV 114
Query: 87 ITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLE 146
I E Y ++V M + N+FRTLPPS NP +FDPEEDEPTLEA+WPH+QLVYEFFLRFLE
Sbjct: 115 IVESAYSDIVKMISANIFRTLPPSDNP---DFDPEEDEPTLEASWPHIQLVYEFFLRFLE 171
Query: 147 SPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINN 206
SPDFQP+IAK+YIDQKFV QLLELFDSEDPRERDFLKT LHRIYGKFLGLRA+IRKQINN
Sbjct: 172 SPDFQPSIAKRYIDQKFVQQLLELFDSEDPRERDFLKTVLHRIYGKFLGLRAFIRKQINN 231
Query: 207 IFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQ 266
IF RFIYETEH NG+AELLEILGSIINGFALPLK EHK FL+KVL+P+H K L+++H Q
Sbjct: 232 IFLRFIYETEHFNGVAELLEILGSIINGFALPLKAEHKQFLMKVLIPMHTAKGLALFHAQ 291
Query: 267 LAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEP 326
LAYCVVQFLEKD+TLTEPV+ LLK+WPKT S KEVMFL E+EEILDVIEP++F KI EP
Sbjct: 292 LAYCVVQFLEKDTTLTEPVIRGLLKFWPKTCSQKEVMFLGEIEEILDVIEPTQFKKIEEP 351
Query: 327 LFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIMFPSLYRNSKTHWNKTI 386
LF+Q++KCVSS HFQVAERALY+WNNEYI+SLI +N KILPIMF SLY+ SK HWN TI
Sbjct: 352 LFKQISKCVSSSHFQVAERALYFWNNEYILSLIEENIDKILPIMFASLYKISKEHWNPTI 411
Query: 387 HGLIYNALKLFMEMNQKLFDDCTQQFKAEKLKEKLKMKEREEAWVKIENL 436
L+YN LK MEMN KLFDD T +KAE+ +EK K EREE W K+E L
Sbjct: 412 VALVYNVLKTLMEMNGKLFDDLTSSYKAERQREKKKELEREELWKKLEEL 461
>gi|5453952 beta isoform of regulatory subunit B56, protein
phosphatase 2A [Homo sapiens]
Length = 497
Score = 591 bits (1524), Expect = e-169
Identities = 286/407 (70%), Positives = 342/407 (84%), Gaps = 4/407 (0%)
Query: 30 IRDVPPADQEKLFIQKLRQCCVLFDFVSDPLSDLKWKEVKRAALSEMVEYITHNRNVITE 89
++DVP ++ +L +KL QC V+FDF+ D ++DLK KEVKRAAL+E+VE + R V+ E
Sbjct: 65 LKDVPASELHELLSRKLAQCGVMFDFL-DCVADLKGKEVKRAALNELVECVGSTRGVLIE 123
Query: 90 PIYPEVVHMFAVNMFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPD 149
P+YP+++ M +VN+FRTLPPS NP EFDPEEDEP LE +WPHLQLVYEFFLRFLESPD
Sbjct: 124 PVYPDIIRMISVNIFRTLPPSENP---EFDPEEDEPNLEPSWPHLQLVYEFFLRFLESPD 180
Query: 150 FQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFY 209
FQP++AK+Y+DQKFVL LLELFDSEDPRER++LKT LHR+YGKFLGLRAYIRKQ N+IF
Sbjct: 181 FQPSVAKRYVDQKFVLMLLELFDSEDPREREYLKTILHRVYGKFLGLRAYIRKQCNHIFL 240
Query: 210 RFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQLAY 269
RFIYE EH NG+AELLEILGSIINGFALPLK EHK FL++VL+PLH VKSLSV+H QLAY
Sbjct: 241 RFIYEFEHFNGVAELLEILGSIINGFALPLKTEHKQFLVRVLIPLHSVKSLSVFHAQLAY 300
Query: 270 CVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFR 329
CVVQFLEKD+TLTE V+ LLKYWPKT + KEVMFL E+EEILDVIEPS+FVKI EPLF+
Sbjct: 301 CVVQFLEKDATLTEHVIRGLLKYWPKTCTQKEVMFLGEMEEILDVIEPSQFVKIQEPLFK 360
Query: 330 QLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIMFPSLYRNSKTHWNKTIHGL 389
Q+A+CVSSPHFQVAERALY+WNNEYI+SLI DN +LP +F +LY+ SK HWN+TI L
Sbjct: 361 QVARCVSSPHFQVAERALYFWNNEYILSLIEDNCHTVLPAVFGTLYQVSKEHWNQTIVSL 420
Query: 390 IYNALKLFMEMNQKLFDDCTQQFKAEKLKEKLKMKEREEAWVKIENL 436
IYN LK FMEMN KLFD+ T +K EK +E+ K +ER+E W +E L
Sbjct: 421 IYNVLKTFMEMNGKLFDELTASYKLEKQQEQQKAQERQELWQGLEEL 467
>gi|4505727 peroxisomal biogenesis factor 3 [Homo sapiens]
Length = 373
Score = 33.9 bits (76), Expect = 0.31
Identities = 33/163 (20%), Positives = 77/163 (47%), Gaps = 18/163 (11%)
Query: 219 NGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKD 278
+G+ EL+ ++ + + +H + LL + L ++++L H ++ + KD
Sbjct: 174 DGLTELITVIKQAVQKVLGSVSLKHSLSLLDLEQKLKEIRNLVEQHKSSSW-----INKD 228
Query: 279 STLTEPVVMALLKYWPKTH--------SPKEVMFLNELEEILDVIEPSEFVKIMEP-LFR 329
+ +P++ + +T SP+++ + L E D++E +F ++ L R
Sbjct: 229 GS--KPLLCHYMMPDEETPLAVQACGLSPRDITTIKLLNETRDMLESPDFSTVLNTCLNR 286
Query: 330 QLAKCVSS--PHFQVAERALYYWNNEYIMSLISDNAAKILPIM 370
++ + + F+ E+ L + N+ +S +S AKI+PI+
Sbjct: 287 GFSRLLDNMAEFFRPTEQDLQHGNSMNSLSSVSLPLAKIIPIV 329
>gi|222080092 WD repeat domain 91 [Homo sapiens]
Length = 747
Score = 31.2 bits (69), Expect = 2.0
Identities = 36/137 (26%), Positives = 55/137 (40%), Gaps = 31/137 (22%)
Query: 36 ADQEKLF-----IQKLRQCCVLFDFVSDPLSDLKWKEVKRAALSEMVEYITHNRNVITEP 90
AD+EK F + +L+Q ++D + L D W ++R S + E
Sbjct: 34 ADKEKGFRVDKIVDQLQQLMQVYDLAA--LRDY-WSYLERRLFSRL------------ED 78
Query: 91 IYPEVVHMFAVNMFR-----TLPPSSNPTGAEFDPEE-DEPTLEAAWPHLQLVYEFFLRF 144
IY +H ++FR T+ + N EF ++ E +A W F L F
Sbjct: 79 IYRPTIHKLKTSLFRFYLVYTIQTNRNDKAQEFFAKQATELQNQAEWKDW-----FVLPF 133
Query: 145 LESPDFQPNIAKKYIDQ 161
L SPD P A + Q
Sbjct: 134 LPSPDTNPTFATYFSRQ 150
>gi|198442844 dynein, axonemal, heavy chain 10 [Homo sapiens]
Length = 4471
Score = 30.8 bits (68), Expect = 2.6
Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 13/111 (11%)
Query: 349 YWNNEYIMSLISDNAAKILP--IMFPSLYRN-----SKTHWNKTIHGLIYNALKLFMEMN 401
Y +E+ + ++ D KI + P LY+N +W +++ I + + F E+
Sbjct: 534 YVMDEFKIEVLIDIINKIFVQNLENPPLYKNHPPVAGAIYWERSLFFRIKHTILRFQEVQ 593
Query: 402 QKLFDDCTQQFKAEKLKEKLKMKERE----EAWVKIENLAKANPQVLKKRI 448
+ L D Q+ K + L+ MKE E E W+++ + P ++KK +
Sbjct: 594 EILDSDRGQEVKQKYLEVGRTMKEYEDRKYEQWMEVTE--QVLPALMKKSL 642
>gi|110611228 utrophin [Homo sapiens]
Length = 3433
Score = 30.4 bits (67), Expect = 3.4
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Query: 249 KVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKE 301
KVL + K HP+L Y VQ + + L P+ L+ WP+ + P +
Sbjct: 3131 KVLKNKFRSKKYFAKHPRLGYLPVQTVLEGDNLETPI--TLISMWPEHYDPSQ 3181
>gi|163792208 Rho guanine exchange factor 16 [Homo sapiens]
Length = 709
Score = 30.0 bits (66), Expect = 4.4
Identities = 16/60 (26%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 212 IYETEHHNGIAELLEILGSIINGFALPLKEEHKI-FLLKVLLPLHKVKSLSVYHPQLAYC 270
+ + EHH+ + +L++LG+ F L++ HK L++ + + + + +HP +AYC
Sbjct: 320 VTQMEHHHLFSNILDVLGA-SQRFFEDLEQRHKAQVLVEDISDILEEHAEKHFHPYIAYC 378
>gi|154350213 hypothetical protein LOC79591 [Homo sapiens]
Length = 689
Score = 29.6 bits (65), Expect = 5.8
Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 14/118 (11%)
Query: 155 AKKYIDQKFVLQLLELFDSEDP--------RERDFLKTTLHRIYGKFLGLRA----YIRK 202
+KK + +K VL E+F +EDP E +K L + GK L I+
Sbjct: 17 SKKPLKEKVVLMYDEIFMTEDPSKCSPRFWEELFLMKVNLEYLEGKLESLDGEELMKIKD 76
Query: 203 QINNIFYRFIYE--TEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVK 258
IN +F I EH + L+ L ++I G K ++ +L+ K +
Sbjct: 77 NINCLFQHCIQALGEEHPIRVVNALQTLCALIRGVHQKNKSTSGFDIINMLMGFDKAE 134
>gi|218505703 von Willebrand factor A domain containing 3A [Homo
sapiens]
Length = 1184
Score = 29.3 bits (64), Expect = 7.6
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 12/76 (15%)
Query: 11 MVVDAANSNGPFQPVVLLHIRDVPPADQEKLFIQKLRQCCVLFDFVSDPLSDLKWK---- 66
+++D + S GP+ V + L ++LR+CC F+ +S S W+
Sbjct: 962 ILLDTSGSMGPYLQQVKTEL--------VLLIWEQLRKCCDSFNLLSFAESFQSWQDTLV 1013
Query: 67 EVKRAALSEMVEYITH 82
E AA E ++++TH
Sbjct: 1014 ETTDAACHEAMQWVTH 1029
>gi|112807226 hypothetical protein LOC91748 [Homo sapiens]
Length = 1045
Score = 29.3 bits (64), Expect = 7.6
Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 9/78 (11%)
Query: 83 NRNVITEPIYPEVVHMFAVNMFRTLPPSSNPTGA--------EFDPEEDEPTLEAAWPHL 134
N+++ +P H +FR PP NP A + P++ + +AA P +
Sbjct: 209 NQSLPLQPFQLAFGHQVNRQVFRQGPPPPNPVAAFPPQKQQQQQQPQQQQQQQQAALPQM 268
Query: 135 QLVYEFFLRFLESPDFQP 152
L +E F + P QP
Sbjct: 269 PL-FENFYSMPQQPSQQP 285
>gi|44890062 hypothetical protein LOC91748 [Homo sapiens]
Length = 1045
Score = 29.3 bits (64), Expect = 7.6
Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 9/78 (11%)
Query: 83 NRNVITEPIYPEVVHMFAVNMFRTLPPSSNPTGA--------EFDPEEDEPTLEAAWPHL 134
N+++ +P H +FR PP NP A + P++ + +AA P +
Sbjct: 209 NQSLPLQPFQLAFGHQVNRQVFRQGPPPPNPVAAFPPQKQQQQQQPQQQQQQQQAALPQM 268
Query: 135 QLVYEFFLRFLESPDFQP 152
L +E F + P QP
Sbjct: 269 PL-FENFYSMPQQPSQQP 285
>gi|5032281 dystrophin Dp427c isoform [Homo sapiens]
Length = 3677
Score = 28.9 bits (63), Expect = 9.9
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 249 KVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSP 299
KVL + K HP++ Y VQ + + + PV L+ +WP +P
Sbjct: 3366 KVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPV--TLINFWPVDSAP 3414
>gi|5032295 dystrophin Dp116 isoform [Homo sapiens]
Length = 956
Score = 28.9 bits (63), Expect = 9.9
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 249 KVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSP 299
KVL + K HP++ Y VQ + + + PV L+ +WP +P
Sbjct: 645 KVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPV--TLINFWPVDSAP 693
>gi|5032291 dystrophin Dp260-2 isoform [Homo sapiens]
Length = 2341
Score = 28.9 bits (63), Expect = 9.9
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 249 KVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSP 299
KVL + K HP++ Y VQ + + + PV L+ +WP +P
Sbjct: 2030 KVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPV--TLINFWPVDSAP 2078
>gi|150036268 dystrophin Dp260-1 isoform [Homo sapiens]
Length = 2344
Score = 28.9 bits (63), Expect = 9.9
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 249 KVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSP 299
KVL + K HP++ Y VQ + + + PV L+ +WP +P
Sbjct: 2033 KVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPV--TLINFWPVDSAP 2081
>gi|5032315 dystrophin Dp427p2 isoform [Homo sapiens]
Length = 3562
Score = 28.9 bits (63), Expect = 9.9
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 249 KVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSP 299
KVL + K HP++ Y VQ + + + PV L+ +WP +P
Sbjct: 3251 KVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPV--TLINFWPVDSAP 3299
>gi|5032287 dystrophin Dp427p1 isoform [Homo sapiens]
Length = 3681
Score = 28.9 bits (63), Expect = 9.9
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 249 KVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSP 299
KVL + K HP++ Y VQ + + + PV L+ +WP +P
Sbjct: 3370 KVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPV--TLINFWPVDSAP 3418
>gi|5032309 dystrophin Dp140b isoform [Homo sapiens]
Length = 1243
Score = 28.9 bits (63), Expect = 9.9
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 249 KVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSP 299
KVL + K HP++ Y VQ + + + PV L+ +WP +P
Sbjct: 914 KVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPV--TLINFWPVDSAP 962
>gi|5032299 dystrophin Dp71b isoform [Homo sapiens]
Length = 635
Score = 28.9 bits (63), Expect = 9.9
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 249 KVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSP 299
KVL + K HP++ Y VQ + + + PV L+ +WP +P
Sbjct: 306 KVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPV--TLINFWPVDSAP 354
>gi|5032297 dystrophin Dp71 isoform [Homo sapiens]
Length = 617
Score = 28.9 bits (63), Expect = 9.9
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 249 KVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSP 299
KVL + K HP++ Y VQ + + + PV L+ +WP +P
Sbjct: 306 KVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPV--TLINFWPVDSAP 354
>gi|5032293 dystrophin Dp140 isoform [Homo sapiens]
Length = 1225
Score = 28.9 bits (63), Expect = 9.9
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 249 KVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSP 299
KVL + K HP++ Y VQ + + + PV L+ +WP +P
Sbjct: 914 KVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPV--TLINFWPVDSAP 962
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.138 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,688,751
Number of Sequences: 37866
Number of extensions: 737782
Number of successful extensions: 2354
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 2330
Number of HSP's gapped (non-prelim): 43
length of query: 449
length of database: 18,247,518
effective HSP length: 106
effective length of query: 343
effective length of database: 14,233,722
effective search space: 4882166646
effective search space used: 4882166646
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.