Search of human proteins with 30795252

Search of human proteins with 30795252

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|30795252 autophagy-related cysteine endopeptidase 2 isoform
a [Homo sapiens]
         (398 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|30795252 autophagy-related cysteine endopeptidase 2 isoform a...   829   0.0  
gi|30795248 autophagy-related cysteine endopeptidase 2 isoform b...   561   e-160
gi|47132611 APG4 autophagy 4 homolog B isoform a [Homo sapiens]       440   e-123
gi|30410798 APG4 autophagy 4 homolog B isoform b [Homo sapiens]       430   e-120
gi|27903825 APG4 autophagy 4 homolog D [Homo sapiens]                 197   1e-50
gi|30410846 APG4 autophagy 4 homolog C isoform 8 [Homo sapiens]       180   2e-45
gi|30410844 APG4 autophagy 4 homolog C isoform 7 [Homo sapiens]       180   2e-45
gi|146219843 Snf2-related CBP activator protein [Homo sapiens]         32   0.77 
gi|222352177 nuclear factor of kappa light polypeptide gene enha...    29   8.5  
gi|222352179 nuclear factor of kappa light polypeptide gene enha...    29   8.5  
gi|222352175 nuclear factor of kappa light polypeptide gene enha...    29   8.5  
gi|222352173 nuclear factor of kappa light polypeptide gene enha...    29   8.5  
gi|54292123 lysosomal trafficking regulator [Homo sapiens]             29   8.5  

>gi|30795252 autophagy-related cysteine endopeptidase 2 isoform a
           [Homo sapiens]
          Length = 398

 Score =  829 bits (2141), Expect = 0.0
 Identities = 398/398 (100%), Positives = 398/398 (100%)

Query: 1   MESVLSKYEDQITIFTDYLEEYPDTDELVWILGKQHLLKTEKSKLLSDISARLWFTYRRK 60
           MESVLSKYEDQITIFTDYLEEYPDTDELVWILGKQHLLKTEKSKLLSDISARLWFTYRRK
Sbjct: 1   MESVLSKYEDQITIFTDYLEEYPDTDELVWILGKQHLLKTEKSKLLSDISARLWFTYRRK 60

Query: 61  FSPIGGTGPSSDAGWGCMLRCGQMMLAQALICRHLGRDWSWEKQKEQPKEYQRILQCFLD 120
           FSPIGGTGPSSDAGWGCMLRCGQMMLAQALICRHLGRDWSWEKQKEQPKEYQRILQCFLD
Sbjct: 61  FSPIGGTGPSSDAGWGCMLRCGQMMLAQALICRHLGRDWSWEKQKEQPKEYQRILQCFLD 120

Query: 121 RKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVLKKLALFDEWNSLAVYVSMDNTVVIE 180
           RKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVLKKLALFDEWNSLAVYVSMDNTVVIE
Sbjct: 121 RKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVLKKLALFDEWNSLAVYVSMDNTVVIE 180

Query: 181 DIKKMCRVLPLSADTAGDRPPDSLTASNQSKGTSAYCSAWKPLLLIVPLRLGINQINPVY 240
           DIKKMCRVLPLSADTAGDRPPDSLTASNQSKGTSAYCSAWKPLLLIVPLRLGINQINPVY
Sbjct: 181 DIKKMCRVLPLSADTAGDRPPDSLTASNQSKGTSAYCSAWKPLLLIVPLRLGINQINPVY 240

Query: 241 VDAFKECFKMPQSLGALGGKPNNAYYFIGFLGDELIFLDPHTTQTFVDTEENGTVNDQTF 300
           VDAFKECFKMPQSLGALGGKPNNAYYFIGFLGDELIFLDPHTTQTFVDTEENGTVNDQTF
Sbjct: 241 VDAFKECFKMPQSLGALGGKPNNAYYFIGFLGDELIFLDPHTTQTFVDTEENGTVNDQTF 300

Query: 301 HCLQSPQRMNILNLDPSVALGFFCKEEKDFDNWCSLVQKEILKENLRMFELVQKHPSHWP 360
           HCLQSPQRMNILNLDPSVALGFFCKEEKDFDNWCSLVQKEILKENLRMFELVQKHPSHWP
Sbjct: 301 HCLQSPQRMNILNLDPSVALGFFCKEEKDFDNWCSLVQKEILKENLRMFELVQKHPSHWP 360

Query: 361 PFVPPAKPEVTTTGAEFIDSTEQLEEFDLEEDFEILSV 398
           PFVPPAKPEVTTTGAEFIDSTEQLEEFDLEEDFEILSV
Sbjct: 361 PFVPPAKPEVTTTGAEFIDSTEQLEEFDLEEDFEILSV 398


>gi|30795248 autophagy-related cysteine endopeptidase 2 isoform b
           [Homo sapiens]
          Length = 336

 Score =  561 bits (1446), Expect = e-160
 Identities = 295/401 (73%), Positives = 300/401 (74%), Gaps = 68/401 (16%)

Query: 1   MESVLSKYEDQITIFTDYLEEYPDTDELVWILGKQHLLKTEKSKLLSDISARLWFTYRRK 60
           MESVLSKYEDQITIFTDYLEEYPDTDELVWILGKQHLLKTEKSKLLSDISARLWFTYRRK
Sbjct: 1   MESVLSKYEDQITIFTDYLEEYPDTDELVWILGKQHLLKTEKSKLLSDISARLWFTYRRK 60

Query: 61  FSPIGGTGPSSDAGWGCMLRCGQMMLAQALICRHLGRDWSWEKQKEQPKEYQRILQCFLD 120
           FSPIGGTGPSSDAGWGCMLRCGQMMLAQALICRHLGRDWSWEKQKEQPKEYQRILQCFLD
Sbjct: 61  FSPIGGTGPSSDAGWGCMLRCGQMMLAQALICRHLGRDWSWEKQKEQPKEYQRILQCFLD 120

Query: 121 RKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVLKKLALFDEWNSLAVYVSMDNTVVIE 180
           RKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVLKKLALFDEWNSLAVYVSMDNTVVIE
Sbjct: 121 RKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVLKKLALFDEWNSLAVYVSMDNTVVIE 180

Query: 181 DIKKMCRVLPLSADTAGDRPPDSLTASNQSKGTSAYCSAWKPLLLIVPLRLGI---NQIN 237
           DIKKMCRVLPLSADTAGDRPPDSLTASNQS            L+ + P         + N
Sbjct: 181 DIKKMCRVLPLSADTAGDRPPDSLTASNQS----------DELIFLDPHTTQTFVDTEEN 230

Query: 238 PVYVDAFKECFKMPQSLGALGGKPNNAYYFIGFLGDELIFLDPHTTQTFVDTEENGTVND 297
               D    C + PQ +  L                    LDP     F   EE      
Sbjct: 231 GTVNDQTFHCLQSPQRMNILN-------------------LDPSVALGFFCKEE------ 265

Query: 298 QTFHCLQSPQRMNILNLDPSVALGFFCKEEKDFDNWCSLVQKEILKENLRMFELVQKHPS 357
                                         KDFDNWCSLVQKEILKENLRMFELVQKHPS
Sbjct: 266 ------------------------------KDFDNWCSLVQKEILKENLRMFELVQKHPS 295

Query: 358 HWPPFVPPAKPEVTTTGAEFIDSTEQLEEFDLEEDFEILSV 398
           HWPPFVPPAKPEVTTTGAEFIDSTEQLEEFDLEEDFEILSV
Sbjct: 296 HWPPFVPPAKPEVTTTGAEFIDSTEQLEEFDLEEDFEILSV 336


>gi|47132611 APG4 autophagy 4 homolog B isoform a [Homo sapiens]
          Length = 393

 Score =  440 bits (1131), Expect = e-123
 Identities = 214/387 (55%), Positives = 282/387 (72%), Gaps = 18/387 (4%)

Query: 20  EEYPDTDELVWILGKQHLLKTEKSKLLSDISARLWFTYRRKFSPIGGTGPSSDAGWGCML 79
           E++P+T E VWILG+++ + TEK ++LSD+++RLWFTYR+ F  IGGTGP+SD GWGCML
Sbjct: 17  EDFPETSEPVWILGRKYSIFTEKDEILSDVASRLWFTYRKNFPAIGGTGPTSDTGWGCML 76

Query: 80  RCGQMMLAQALICRHLGRDWSWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEG 139
           RCGQM+ AQAL+CRHLGRDW W ++K QP  Y  +L  F+DRKD  YSIHQ+AQMGVGEG
Sbjct: 77  RCGQMIFAQALVCRHLGRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEG 136

Query: 140 KSIGEWFGPNTVAQVLKKLALFDEWNSLAVYVSMDNTVVIEDIKKMCRV-LPLSADTA-- 196
           KSIG+W+GPNTVAQVLKKLA+FD W+SLAV+++MDNTVV+E+I+++CR  +P +  TA  
Sbjct: 137 KSIGQWYGPNTVAQVLKKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTSVPCAGATAFP 196

Query: 197 --GDRPPDSLTASNQSKGTSAYCSAWKPLLLIVPLRLGINQINPVYVDAFKECFKMPQSL 254
              DR  +   A  +        S W+PL+L++PLRLG+  IN  YV+  K CF MPQSL
Sbjct: 197 ADSDRHCNGFPAGAEVTNRP---SPWRPLVLLIPLRLGLTDINEAYVETLKHCFMMPQSL 253

Query: 255 GALGGKPNNAYYFIGFLGDELIFLDPHTTQTFVDTEENGTVNDQTFHCLQSPQRMNILNL 314
           G +GGKPN+A+YFIG++G+ELI+LDPHTTQ  V+  +   + D++FHC   P RM+I  L
Sbjct: 254 GVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVEPTDGCFIPDESFHCQHPPCRMSIAEL 313

Query: 315 DPSVALGFFCKEEKDFDNWCSLVQK-EILKENLRMFELVQKHPSHWPPFVPPAKPEVTTT 373
           DPS+A+GFFCK E DF++WC  V+K  +L   L MFELV+  PSH       A P+V   
Sbjct: 314 DPSIAVGFFCKTEDDFNDWCQQVKKLSLLGGALPMFELVELQPSHL------ACPDVLNL 367

Query: 374 GAEFIDSTEQLEEF--DLEEDFEILSV 398
             +  D  E+LE F    +EDFEILS+
Sbjct: 368 SLDSSD-VERLERFFDSEDEDFEILSL 393


>gi|30410798 APG4 autophagy 4 homolog B isoform b [Homo sapiens]
          Length = 380

 Score =  430 bits (1105), Expect = e-120
 Identities = 199/345 (57%), Positives = 262/345 (75%), Gaps = 9/345 (2%)

Query: 20  EEYPDTDELVWILGKQHLLKTEKSKLLSDISARLWFTYRRKFSPIGGTGPSSDAGWGCML 79
           E++P+T E VWILG+++ + TEK ++LSD+++RLWFTYR+ F  IGGTGP+SD GWGCML
Sbjct: 17  EDFPETSEPVWILGRKYSIFTEKDEILSDVASRLWFTYRKNFPAIGGTGPTSDTGWGCML 76

Query: 80  RCGQMMLAQALICRHLGRDWSWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEG 139
           RCGQM+ AQAL+CRHLGRDW W ++K QP  Y  +L  F+DRKD  YSIHQ+AQMGVGEG
Sbjct: 77  RCGQMIFAQALVCRHLGRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEG 136

Query: 140 KSIGEWFGPNTVAQVLKKLALFDEWNSLAVYVSMDNTVVIEDIKKMCRV-LPLSADTA-- 196
           KSIG+W+GPNTVAQVLKKLA+FD W+SLAV+++MDNTVV+E+I+++CR  +P +  TA  
Sbjct: 137 KSIGQWYGPNTVAQVLKKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTSVPCAGATAFP 196

Query: 197 --GDRPPDSLTASNQSKGTSAYCSAWKPLLLIVPLRLGINQINPVYVDAFKECFKMPQSL 254
              DR  +   A  +        S W+PL+L++PLRLG+  IN  YV+  K CF MPQSL
Sbjct: 197 ADSDRHCNGFPAGAEVTNRP---SPWRPLVLLIPLRLGLTDINEAYVETLKHCFMMPQSL 253

Query: 255 GALGGKPNNAYYFIGFLGDELIFLDPHTTQTFVDTEENGTVNDQTFHCLQSPQRMNILNL 314
           G +GGKPN+A+YFIG++G+ELI+LDPHTTQ  V+  +   + D++FHC   P RM+I  L
Sbjct: 254 GVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVEPTDGCFIPDESFHCQHPPCRMSIAEL 313

Query: 315 DPSVALGFFCKEEKDFDNWCSLVQK-EILKENLRMFELVQKHPSH 358
           DPS+A+GFFCK E DF++WC  V+K  +L   L MFELV+  PSH
Sbjct: 314 DPSIAVGFFCKTEDDFNDWCQQVKKLSLLGGALPMFELVELQPSH 358


>gi|27903825 APG4 autophagy 4 homolog D [Homo sapiens]
          Length = 474

 Score =  197 bits (501), Expect = 1e-50
 Identities = 114/347 (32%), Positives = 171/347 (49%), Gaps = 66/347 (19%)

Query: 48  DISARLWFTYRRKFSPIGGTGPSSDAGWGCMLRCGQMMLAQALICRHLGRDWSWEK---- 103
           D  +RLW TYRR F P+ G   +SD GWGCMLR GQMMLAQ L+   L RDW+W +    
Sbjct: 115 DFVSRLWLTYRRDFPPLPGGCLTSDCGWGCMLRSGQMMLAQGLLLHFLPRDWTWAEGMGL 174

Query: 104 ------------------------------QKEQPKEYQRILQCFLDRKDCCYSIHQMAQ 133
                                         + EQ + +++I+  F D     + +H++ +
Sbjct: 175 GPPELSGSASPSRYHGPARWMPPRWAQGAPELEQERRHRQIVSWFADHPRAPFGLHRLVE 234

Query: 134 MGVGEGKSIGEWFGPNTVAQVLKK-LALFDEWNSLAVYVSMDNTVVIEDIKKMCRVLPLS 192
           +G   GK  G+W+GP+ VA +L+K +    +   L VYVS D TV   D+ ++       
Sbjct: 235 LGQSSGKKAGDWYGPSLVAHILRKAVESCSDVTRLVVYVSQDCTVYKADVARLVA----- 289

Query: 193 ADTAGDRPPDSLTASNQSKGTSAYCSAWKPLLLIVPLRLGINQINPVYVDAFKECFKMPQ 252
                 RP  +              + WK ++++VP+RLG   +NPVYV   KE  +   
Sbjct: 290 ------RPDPT--------------AEWKSVVILVPVRLGGETLNPVYVPCVKELLRCEL 329

Query: 253 SLGALGGKPNNAYYFIGFLGDELIFLDPHTTQTFVDTEENGTVNDQTFHCLQSPQRMNIL 312
            LG +GGKP ++ YFIG+  D L++LDPH  Q  VD  +      ++FHC  SP++M   
Sbjct: 330 CLGIMGGKPRHSLYFIGYQDDFLLYLDPHYCQPTVDVSQ-ADFPLESFHC-TSPRKMAFA 387

Query: 313 NLDPSVALGFFCKEEKDFDNWCS----LVQKEILKENLRMFELVQKH 355
            +DPS  +GF+  + K+F+  CS    ++      E   MF L + H
Sbjct: 388 KMDPSCTVGFYAGDRKEFETLCSELTRVLSSSSATERYPMFTLAEGH 434


>gi|30410846 APG4 autophagy 4 homolog C isoform 8 [Homo sapiens]
          Length = 458

 Score =  180 bits (456), Expect = 2e-45
 Identities = 123/422 (29%), Positives = 191/422 (45%), Gaps = 99/422 (23%)

Query: 34  KQHLLKTEKSKLLSDISARLWFTYRRKFSPIGGTGPSSDAGWGCMLRCGQMMLAQALICR 93
           + H++     +   D  +R+W TYR +F  I G+  ++D GWGC LR GQM+LAQ LI  
Sbjct: 68  EDHVIAGNVEEFRKDFISRIWLTYREEFPQIEGSALTTDCGWGCTLRTGQMLLAQGLILH 127

Query: 94  HLGRDWSW--------------------------------EKQKEQP----KE------- 110
            LGR W+W                                E++ + P    KE       
Sbjct: 128 FLGRAWTWPDALNIENSDSESWTSHTVKKFTASFEASLSGEREFKTPTISLKETIGKYSD 187

Query: 111 ---------YQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVLKKL--- 158
                    +++I+  F D     + +HQ+ + G   GK  G+W+GP  VA +L+K    
Sbjct: 188 DHEMRNEVYHRKIISWFGDSPLALFGLHQLIEYGKKSGKKAGDWYGPAVVAHILRKAVEE 247

Query: 159 ALFDEWNSLAVYVSMDNTVVIEDIKKMCRVLPLSADTAGDRPPDSLTASNQSKGTSAYCS 218
           A   +   + +YV+ D TV   D+               D+   S+T+ N          
Sbjct: 248 ARHPDLQGITIYVAQDCTVYNSDVI--------------DKQSASMTSDNADD------- 286

Query: 219 AWKPLLLIVPLRLGINQINPVYVDAFKECFKMPQSLGALGGKPNNAYYFIGFLGDELIFL 278
             K ++++VP+RLG  + N  Y++  K    +   +G +GGKP  +YYF GF  D LI++
Sbjct: 287 --KAVIILVPVRLGGERTNTDYLEFVKGILSLEYCVGIIGGKPKQSYYFAGFQDDSLIYM 344

Query: 279 DPHTTQTFVDTEENGTVND---QTFHCLQSPQRMNILNLDPSVALGFFCKEEKDFDNWCS 335
           DPH  Q+FVD     ++ D   +TFHC  SP++M+   +DPS  +GF+C+  +DF     
Sbjct: 345 DPHYCQSFVDV----SIKDFPLETFHC-PSPKKMSFRKMDPSCTIGFYCRNVQDFKRASE 399

Query: 336 LVQKEI---LKENLRMFELVQKHPSHWPPFVPPAKPEVTTTGAEFI---DSTEQLEEFDL 389
            + K +    KE   +F  V  H   +  F        TTT  E +   D  +QL+ F  
Sbjct: 400 EITKMLKFSSKEKYPLFTFVNGHSRDY-DFTS------TTTNEEDLFSEDEKKQLKRFST 452

Query: 390 EE 391
           EE
Sbjct: 453 EE 454


>gi|30410844 APG4 autophagy 4 homolog C isoform 7 [Homo sapiens]
          Length = 458

 Score =  180 bits (456), Expect = 2e-45
 Identities = 123/422 (29%), Positives = 191/422 (45%), Gaps = 99/422 (23%)

Query: 34  KQHLLKTEKSKLLSDISARLWFTYRRKFSPIGGTGPSSDAGWGCMLRCGQMMLAQALICR 93
           + H++     +   D  +R+W TYR +F  I G+  ++D GWGC LR GQM+LAQ LI  
Sbjct: 68  EDHVIAGNVEEFRKDFISRIWLTYREEFPQIEGSALTTDCGWGCTLRTGQMLLAQGLILH 127

Query: 94  HLGRDWSW--------------------------------EKQKEQP----KE------- 110
            LGR W+W                                E++ + P    KE       
Sbjct: 128 FLGRAWTWPDALNIENSDSESWTSHTVKKFTASFEASLSGEREFKTPTISLKETIGKYSD 187

Query: 111 ---------YQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVLKKL--- 158
                    +++I+  F D     + +HQ+ + G   GK  G+W+GP  VA +L+K    
Sbjct: 188 DHEMRNEVYHRKIISWFGDSPLALFGLHQLIEYGKKSGKKAGDWYGPAVVAHILRKAVEE 247

Query: 159 ALFDEWNSLAVYVSMDNTVVIEDIKKMCRVLPLSADTAGDRPPDSLTASNQSKGTSAYCS 218
           A   +   + +YV+ D TV   D+               D+   S+T+ N          
Sbjct: 248 ARHPDLQGITIYVAQDCTVYNSDVI--------------DKQSASMTSDNADD------- 286

Query: 219 AWKPLLLIVPLRLGINQINPVYVDAFKECFKMPQSLGALGGKPNNAYYFIGFLGDELIFL 278
             K ++++VP+RLG  + N  Y++  K    +   +G +GGKP  +YYF GF  D LI++
Sbjct: 287 --KAVIILVPVRLGGERTNTDYLEFVKGILSLEYCVGIIGGKPKQSYYFAGFQDDSLIYM 344

Query: 279 DPHTTQTFVDTEENGTVND---QTFHCLQSPQRMNILNLDPSVALGFFCKEEKDFDNWCS 335
           DPH  Q+FVD     ++ D   +TFHC  SP++M+   +DPS  +GF+C+  +DF     
Sbjct: 345 DPHYCQSFVDV----SIKDFPLETFHC-PSPKKMSFRKMDPSCTIGFYCRNVQDFKRASE 399

Query: 336 LVQKEI---LKENLRMFELVQKHPSHWPPFVPPAKPEVTTTGAEFI---DSTEQLEEFDL 389
            + K +    KE   +F  V  H   +  F        TTT  E +   D  +QL+ F  
Sbjct: 400 EITKMLKFSSKEKYPLFTFVNGHSRDY-DFTS------TTTNEEDLFSEDEKKQLKRFST 452

Query: 390 EE 391
           EE
Sbjct: 453 EE 454


>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
          Length = 3230

 Score = 32.3 bits (72), Expect = 0.77
 Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 4/63 (6%)

Query: 104 QKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVLKKLA---- 159
           +K+ PK+Y+ +++C L ++  C     MAQ    E  + G +     +   L+K+     
Sbjct: 846 EKQMPKKYEHVIRCRLSKRQRCLYDDFMAQTTTKETLATGHFMSVINILMQLRKVCNHPN 905

Query: 160 LFD 162
           LFD
Sbjct: 906 LFD 908


>gi|222352177 nuclear factor of kappa light polypeptide gene
           enhancer in B-cells inhibitor-like 1 isoform 3 [Homo
           sapiens]
          Length = 358

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 181 DIKKMCRVLPLSADTAG-DRPPDSLTASNQSKGTSAYCSAWKPLLLIVPLRLGI 233
           D   +C +L L AD A  DR  D+   +   +G  AY   + PLL   P  +GI
Sbjct: 54  DAPALCLLLRLGADPAHQDRHGDTALHAAARQGPDAYTDFFLPLLSRCPSAMGI 107


>gi|222352179 nuclear factor of kappa light polypeptide gene
           enhancer in B-cells inhibitor-like 1 isoform 4 [Homo
           sapiens]
          Length = 343

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 181 DIKKMCRVLPLSADTAG-DRPPDSLTASNQSKGTSAYCSAWKPLLLIVPLRLGI 233
           D   +C +L L AD A  DR  D+   +   +G  AY   + PLL   P  +GI
Sbjct: 54  DAPALCLLLRLGADPAHQDRHGDTALHAAARQGPDAYTDFFLPLLSRCPSAMGI 107


>gi|222352175 nuclear factor of kappa light polypeptide gene
           enhancer in B-cells inhibitor-like 1 isoform 2 [Homo
           sapiens]
          Length = 366

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 181 DIKKMCRVLPLSADTAG-DRPPDSLTASNQSKGTSAYCSAWKPLLLIVPLRLGI 233
           D   +C +L L AD A  DR  D+   +   +G  AY   + PLL   P  +GI
Sbjct: 77  DAPALCLLLRLGADPAHQDRHGDTALHAAARQGPDAYTDFFLPLLSRCPSAMGI 130


>gi|222352173 nuclear factor of kappa light polypeptide gene
           enhancer in B-cells inhibitor-like 1 isoform 1 [Homo
           sapiens]
          Length = 381

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 181 DIKKMCRVLPLSADTAG-DRPPDSLTASNQSKGTSAYCSAWKPLLLIVPLRLGI 233
           D   +C +L L AD A  DR  D+   +   +G  AY   + PLL   P  +GI
Sbjct: 77  DAPALCLLLRLGADPAHQDRHGDTALHAAARQGPDAYTDFFLPLLSRCPSAMGI 130


>gi|54292123 lysosomal trafficking regulator [Homo sapiens]
          Length = 3801

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 4/50 (8%)

Query: 166  SLAVYVSMDNTVVIEDIKKMCRVLPLSADTAGDRPPDSLTASNQSKGTSA 215
            S+ + VS D T +I D+ ++C V  L    AG + P +  +++++ G  A
Sbjct: 3629 SILISVSRDGTCIIWDLNRLCYVQSL----AGHKSPVTAVSASETSGDIA 3674


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.137    0.430 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,398,428
Number of Sequences: 37866
Number of extensions: 739835
Number of successful extensions: 1803
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1780
Number of HSP's gapped (non-prelim): 22
length of query: 398
length of database: 18,247,518
effective HSP length: 104
effective length of query: 294
effective length of database: 14,309,454
effective search space: 4206979476
effective search space used: 4206979476
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.