| Name: ATG4A | Sequence: fasta or formatted (336aa) | NCBI GI: 30795248 | |
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Description: autophagy-related cysteine endopeptidase 2 isoform b
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Referenced in:
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Other entries for this name:
alt prot [398aa] autophagy-related cysteine endopeptidase 2 isoform a | |||
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 4.2 14 1 C cysteine 3.0 10 2 D aspartate 7.4 25 1 E glutamate 8.6 29 2 F phenylalanine 5.1 17 2 G glycine 5.1 17 2 H histidine 2.1 7 1 I isoleucine 4.8 16 1 K lysine 6.2 21 2 L leucine 10.4 35 2 M methionine 3.0 10 2 N asparagine 3.0 10 1 P proline 5.1 17 2 Q glutamine 5.7 19 1 R arginine 3.6 12 2 S serine 6.8 23 2 T threonine 6.0 20 3 V valine 5.4 18 2 W tryptophan 2.7 9 1 Y tyrosine 2.1 7 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 autophagy-related cysteine endopeptidase 2 isoform b... ATG4A 0.794 autophagy-related cysteine endopeptidase 2 isoform a... ATG4B 0.407 APG4 autophagy 4 homolog B isoform a ATG4B 0.393 APG4 autophagy 4 homolog B isoform b ATG4D 0.173 APG4 autophagy 4 homolog D ATG4C 0.160 APG4 autophagy 4 homolog C isoform 8 ATG4C 0.160 APG4 autophagy 4 homolog C isoform 7 SRCAP 0.010 Snf2-related CBP activator proteinHuman BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
