| Name: CHODL | Sequence: fasta or formatted (273aa) | NCBI GI: 20127636 | |
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Description: chondrolectin precursor
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Referenced in:
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 4.8 13 2 C cysteine 4.4 12 2 D aspartate 3.7 10 2 E glutamate 5.9 16 1 F phenylalanine 2.9 8 1 G glycine 8.4 23 2 H histidine 2.6 7 1 I isoleucine 4.4 12 2 K lysine 5.1 14 1 L leucine 9.5 26 4 M methionine 2.6 7 1 N asparagine 5.1 14 1 P proline 5.9 16 1 Q glutamine 4.8 13 1 R arginine 3.7 10 2 S serine 8.1 22 2 T threonine 5.5 15 1 V valine 6.2 17 3 W tryptophan 2.2 6 1 Y tyrosine 4.4 12 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 chondrolectin precursor LAYN 0.396 layilin MRC2 0.071 mannose receptor, C type 2 MRC1 0.071 mannose receptor C type 1 precursor MRC1L1 0.071 mannose receptor, C type 1-like 1 NCAN 0.058 chondroitin sulfate proteoglycan 3 CLEC18A 0.054 secretory protein LOC348174 CLEC18A 0.054 secretory protein LOC348174 COLEC12 0.052 collectin sub-family member 12 VCAN 0.051 versican isoform 2 VCAN 0.051 versican isoform 1 CLEC18C 0.051 mannose receptor-like CLEC18B 0.049 C-type lectin domain family 18, member B PLA2R1 0.047 phospholipase A2 receptor 1 isoform 2 precursor [Hom... PLA2R1 0.047 phospholipase A2 receptor 1 isoform 1 precursor [Hom... BCAN 0.047 brevican isoform 1 CLEC14A 0.047 C-type lectin domain family 14, member A SFTPA2 0.047 surfactant protein A2 SFTPA1B 0.047 surfactant, pulmonary-associated protein A1B SFTPA2B 0.047 surfactant, pulmonary-associated protein A2 PKD1L2 0.045 polycystin 1-like 2 isoform c PKD1L2 0.045 polycystin 1-like 2 isoform a SFTPA1 0.042 surfactant protein A1 CLEC3A 0.040 C-type lectin domain family 3 member A REG1A 0.040 regenerating islet-derived 1 alpha precursor REG1B 0.038 regenerating islet-derived 1 beta precursor ACAN 0.038 aggrecan isoform 2 precursor ACAN 0.036 aggrecan isoform 1 precursor LY75 0.036 lymphocyte antigen 75 FCER2 0.034 Fc fragment of IgE, low affinity II, receptor for (C...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
