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Search of human proteins with 29540564
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|29540564 armadillo repeat containing, X-linked 3 [Homo
sapiens]
(379 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|29540566 armadillo repeat containing, X-linked 3 [Homo sapiens] 753 0.0
gi|29540564 armadillo repeat containing, X-linked 3 [Homo sapiens] 753 0.0
gi|7705274 armadillo repeat containing, X-linked 3 [Homo sapiens] 753 0.0
gi|7706143 armadillo repeat containing, X-linked 1 [Homo sapiens] 318 5e-87
gi|31377663 SVH protein isoform a [Homo sapiens] 295 5e-80
gi|7662162 ALEX2 protein [Homo sapiens] 265 7e-71
gi|29540562 ALEX2 protein [Homo sapiens] 265 7e-71
gi|238776793 SVH protein isoform b [Homo sapiens] 262 4e-70
gi|239757861 PREDICTED: similar to armadillo repeat containing, ... 236 3e-62
gi|169165522 PREDICTED: similar to SVH protein isoform 1 [Homo s... 214 8e-56
gi|238776797 SVH protein isoform e [Homo sapiens] 212 4e-55
gi|169165931 PREDICTED: similar to SVH protein isoform 1 [Homo s... 211 7e-55
gi|113414573 PREDICTED: similar to SVH protein isoform 2 [Homo s... 211 7e-55
gi|34147335 armadillo repeat containing, X-linked 6 [Homo sapiens] 176 2e-44
gi|57546906 armadillo repeat containing, X-linked 6 [Homo sapiens] 176 2e-44
gi|169165524 PREDICTED: similar to SVH protein isoform 2 [Homo s... 156 3e-38
gi|238776799 SVH protein isoform d [Homo sapiens] 155 6e-38
gi|41054846 armadillo repeat containing, X-linked 5 [Homo sapiens] 153 2e-37
gi|113415138 PREDICTED: similar to SVH protein isoform 2 [Homo s... 153 3e-37
gi|169165133 PREDICTED: similar to SVH protein isoform 1 [Homo s... 153 3e-37
gi|238776795 SVH protein isoform c [Homo sapiens] 144 1e-34
gi|150378528 G protein-coupled receptor associated sorting prote... 137 2e-32
gi|150378489 G protein-coupled receptor associated sorting prote... 137 2e-32
gi|103472136 G protein-coupled receptor associated sorting prote... 137 2e-32
gi|51702248 G protein-coupled receptor associated sorting protei... 127 2e-29
gi|19923967 G protein-coupled receptor associated sorting protei... 127 2e-29
gi|216547715 basic helix-loop-helix domain containing, class B, ... 122 5e-28
gi|216547682 basic helix-loop-helix domain containing, class B, ... 122 5e-28
gi|216547672 basic helix-loop-helix domain containing, class B, ... 122 5e-28
gi|216547663 basic helix-loop-helix domain containing, class B, ... 122 5e-28
>gi|29540566 armadillo repeat containing, X-linked 3 [Homo sapiens]
Length = 379
Score = 753 bits (1944), Expect = 0.0
Identities = 379/379 (100%), Positives = 379/379 (100%)
Query: 1 MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCSGARYNDW 60
MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCSGARYNDW
Sbjct: 1 MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCSGARYNDW 60
Query: 61 SDDDDDSNESKSIVWYPPWARIGTEAGTRARARARARATRARRAVQKRASPNSDDTVLSP 120
SDDDDDSNESKSIVWYPPWARIGTEAGTRARARARARATRARRAVQKRASPNSDDTVLSP
Sbjct: 61 SDDDDDSNESKSIVWYPPWARIGTEAGTRARARARARATRARRAVQKRASPNSDDTVLSP 120
Query: 121 QELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDIIRDLGGLPIVAKILNTRDPIVK 180
QELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDIIRDLGGLPIVAKILNTRDPIVK
Sbjct: 121 QELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDIIRDLGGLPIVAKILNTRDPIVK 180
Query: 181 EKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQHM 240
EKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQHM
Sbjct: 181 EKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQHM 240
Query: 241 LANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTRELLRAQVPSSLGSLFNKKENKE 300
LANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTRELLRAQVPSSLGSLFNKKENKE
Sbjct: 241 LANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTRELLRAQVPSSLGSLFNKKENKE 300
Query: 301 VILKLLVIFENINDNFKWEENEPTQNQFGEGSLFFFLKEFQVCADKVLGIESHHDFLVKV 360
VILKLLVIFENINDNFKWEENEPTQNQFGEGSLFFFLKEFQVCADKVLGIESHHDFLVKV
Sbjct: 301 VILKLLVIFENINDNFKWEENEPTQNQFGEGSLFFFLKEFQVCADKVLGIESHHDFLVKV 360
Query: 361 KVGKFMAKLAEHMFPKSQE 379
KVGKFMAKLAEHMFPKSQE
Sbjct: 361 KVGKFMAKLAEHMFPKSQE 379
>gi|29540564 armadillo repeat containing, X-linked 3 [Homo sapiens]
Length = 379
Score = 753 bits (1944), Expect = 0.0
Identities = 379/379 (100%), Positives = 379/379 (100%)
Query: 1 MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCSGARYNDW 60
MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCSGARYNDW
Sbjct: 1 MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCSGARYNDW 60
Query: 61 SDDDDDSNESKSIVWYPPWARIGTEAGTRARARARARATRARRAVQKRASPNSDDTVLSP 120
SDDDDDSNESKSIVWYPPWARIGTEAGTRARARARARATRARRAVQKRASPNSDDTVLSP
Sbjct: 61 SDDDDDSNESKSIVWYPPWARIGTEAGTRARARARARATRARRAVQKRASPNSDDTVLSP 120
Query: 121 QELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDIIRDLGGLPIVAKILNTRDPIVK 180
QELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDIIRDLGGLPIVAKILNTRDPIVK
Sbjct: 121 QELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDIIRDLGGLPIVAKILNTRDPIVK 180
Query: 181 EKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQHM 240
EKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQHM
Sbjct: 181 EKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQHM 240
Query: 241 LANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTRELLRAQVPSSLGSLFNKKENKE 300
LANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTRELLRAQVPSSLGSLFNKKENKE
Sbjct: 241 LANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTRELLRAQVPSSLGSLFNKKENKE 300
Query: 301 VILKLLVIFENINDNFKWEENEPTQNQFGEGSLFFFLKEFQVCADKVLGIESHHDFLVKV 360
VILKLLVIFENINDNFKWEENEPTQNQFGEGSLFFFLKEFQVCADKVLGIESHHDFLVKV
Sbjct: 301 VILKLLVIFENINDNFKWEENEPTQNQFGEGSLFFFLKEFQVCADKVLGIESHHDFLVKV 360
Query: 361 KVGKFMAKLAEHMFPKSQE 379
KVGKFMAKLAEHMFPKSQE
Sbjct: 361 KVGKFMAKLAEHMFPKSQE 379
>gi|7705274 armadillo repeat containing, X-linked 3 [Homo sapiens]
Length = 379
Score = 753 bits (1944), Expect = 0.0
Identities = 379/379 (100%), Positives = 379/379 (100%)
Query: 1 MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCSGARYNDW 60
MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCSGARYNDW
Sbjct: 1 MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCSGARYNDW 60
Query: 61 SDDDDDSNESKSIVWYPPWARIGTEAGTRARARARARATRARRAVQKRASPNSDDTVLSP 120
SDDDDDSNESKSIVWYPPWARIGTEAGTRARARARARATRARRAVQKRASPNSDDTVLSP
Sbjct: 61 SDDDDDSNESKSIVWYPPWARIGTEAGTRARARARARATRARRAVQKRASPNSDDTVLSP 120
Query: 121 QELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDIIRDLGGLPIVAKILNTRDPIVK 180
QELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDIIRDLGGLPIVAKILNTRDPIVK
Sbjct: 121 QELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDIIRDLGGLPIVAKILNTRDPIVK 180
Query: 181 EKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQHM 240
EKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQHM
Sbjct: 181 EKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQHM 240
Query: 241 LANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTRELLRAQVPSSLGSLFNKKENKE 300
LANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTRELLRAQVPSSLGSLFNKKENKE
Sbjct: 241 LANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTRELLRAQVPSSLGSLFNKKENKE 300
Query: 301 VILKLLVIFENINDNFKWEENEPTQNQFGEGSLFFFLKEFQVCADKVLGIESHHDFLVKV 360
VILKLLVIFENINDNFKWEENEPTQNQFGEGSLFFFLKEFQVCADKVLGIESHHDFLVKV
Sbjct: 301 VILKLLVIFENINDNFKWEENEPTQNQFGEGSLFFFLKEFQVCADKVLGIESHHDFLVKV 360
Query: 361 KVGKFMAKLAEHMFPKSQE 379
KVGKFMAKLAEHMFPKSQE
Sbjct: 361 KVGKFMAKLAEHMFPKSQE 379
>gi|7706143 armadillo repeat containing, X-linked 1 [Homo sapiens]
Length = 453
Score = 318 bits (815), Expect = 5e-87
Identities = 188/453 (41%), Positives = 259/453 (57%), Gaps = 84/453 (18%)
Query: 1 MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNK-------------EKMAEGGSGDVD 47
MG R+ G V AG+VIGAGACYC+YRL GR +N+ E E G
Sbjct: 1 MGRTREAGCVAAGVVIGAGACYCVYRLAWGRDENEKIWDEDEESTDTSEIGVETVKGAKT 60
Query: 48 DAGDCSGARYNDWSDDDDDSN-----------------------ESKSIVWY-------- 76
+AG SGA+ S+ + + E+K+ +
Sbjct: 61 NAGAGSGAKLQGDSEVKPEVSLGLEDCPGVKEKAHSGSHSGGGLEAKAKALFNTLKEQAS 120
Query: 77 ---PPWARIGTEAG--------------------TRARARARARATRARRAVQKRAS--- 110
AR+GT +G TR+ +RA RA+ + + S
Sbjct: 121 AKAGKGARVGTISGNRTLAPSLPCPGGRGGGCHPTRSGSRAGGRASGKSKGKARSKSTRA 180
Query: 111 --------------PNSDDTVLSPQELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNR 156
P D +LS +LQKVL ++E + P+I E AL+ LGNNAAY+FN+
Sbjct: 181 PATTWPVRRGKFNFPYKIDDILSAPDLQKVLNILERTNDPFIQEVALVTLGNNAAYSFNQ 240
Query: 157 DIIRDLGGLPIVAKILNTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRL 216
+ IR+LGG+PI+AK++ T+DPI++EK LNNLSVNAENQ ++K Y++QVCDDT+ RL
Sbjct: 241 NAIRELGGVPIIAKLIKTKDPIIREKTYNALNNLSVNAENQGKIKTYISQVCDDTMVCRL 300
Query: 217 NSSVQLAGLRLLTNMTVTNEYQHMLANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAM 276
+S+VQ+AGLRLLTNMTVTN YQH+L+ S DFF L GN TK+Q++KL++N ENPAM
Sbjct: 301 DSAVQMAGLRLLTNMTVTNHYQHLLSYSFPDFFALLFLGNHFTKIQIMKLIINFTENPAM 360
Query: 277 TRELLRAQVPSSLGSLFNKKENKEVILKLLVIFENINDNFKWEENEPTQNQFGEGSLFFF 336
TREL+ +VPS L SLFNK+ ++E++L +L +FENINDN K E ++ +F SLFF
Sbjct: 361 TRELVSCKVPSELISLFNKEWDREILLNILTLFENINDNIKNEGLASSRKEFSRSSLFFL 420
Query: 337 LKEFQVCADKVLGIESHHDFLVKVKVGKFMAKL 369
KE VC K+ + +H+D +VKVKV K + KL
Sbjct: 421 FKESGVCVKKIKALANHNDLVVKVKVLKVLTKL 453
>gi|31377663 SVH protein isoform a [Homo sapiens]
Length = 343
Score = 295 bits (755), Expect = 5e-80
Identities = 171/371 (46%), Positives = 232/371 (62%), Gaps = 30/371 (8%)
Query: 1 MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCSGARYNDW 60
MG R GWV AGL++GAGACYCIYRLTRGR++ ++ S +GA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKS-------AGALEEGT 53
Query: 61 SDDDDDSNESKSIVWYPPWARIGTEAGTRARARARA--RATRARRAVQKRASPNSDDTVL 118
S+ G G AR + + ++ + + + S D VL
Sbjct: 54 SE--------------------GQLCGRSARPQTGGTWESQWSKTSQPEDLTDGSYDDVL 93
Query: 119 SPQELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDIIRDLGGLPIVAKILNTRDPI 178
+ ++LQK+L L+E +E P I+E ALI LGNNAA++ N+ IIR+LGG+PIVA +N +
Sbjct: 94 NAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQS 153
Query: 179 VKEKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQ 238
+KEKAL LNNLSVN ENQ ++K+Y++QVC+D + LNS+VQLAGL LLTNMTVTN++Q
Sbjct: 154 IKEKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQ 213
Query: 239 HMLANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTRELLRAQVPSSLGSLFNKKEN 298
HML + I+D F++ GN TK+QVLKLLLNL+ENPAMT LLRAQV SS SL++
Sbjct: 214 HMLHSYITDLFQVLLTGNGNTKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVA 273
Query: 299 KEVILKLLVIFENINDNFKWEENEPTQNQFGEGSLFFFLKEFQVCADKVLGIESHHDFLV 358
KE++L++L +F+NI + K E + Q F EGSLFF L + CA K+ + HHD V
Sbjct: 274 KEILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLL-HGEECAQKIRALVDHHDAEV 332
Query: 359 KVKVGKFMAKL 369
K KV + K+
Sbjct: 333 KEKVVTIIPKI 343
>gi|7662162 ALEX2 protein [Homo sapiens]
Length = 632
Score = 265 bits (676), Expect = 7e-71
Identities = 144/330 (43%), Positives = 204/330 (61%), Gaps = 23/330 (6%)
Query: 39 AEGGSGDVDDAGDCSGARYNDWSDDDDDSNESKSIVWYPPWARIGTEAGTRARARARARA 98
A GG + + D + W+D + DS+ +E T+ R R R
Sbjct: 325 ANGGQAFLAEVPDSEEGE-SGWTDTESDSD---------------SEPETQRRGRGRRPV 368
Query: 99 TRARRAVQKRASPNSDDTVLSPQELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDI 158
A+QKR P D +L ++L+KVL L++ S+ P+I + AL+ L NNA Y+ N++
Sbjct: 369 -----AMQKRPFPYEIDEILGVRDLRKVLALLQKSDDPFIQQVALLTLSNNANYSCNQET 423
Query: 159 IRDLGGLPIVAKILNTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNS 218
IR LGGLPI+A ++N DP +KEKAL+ +NNLS N ENQ RL+VYMN+V DD + S LNS
Sbjct: 424 IRKLGGLPIIANMINKTDPHIKEKALMAMNNLSENYENQGRLQVYMNKVMDDIMASNLNS 483
Query: 219 SVQLAGLRLLTNMTVTNEYQHMLANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTR 278
+VQ+ GL+ LTNMT+TN+YQH+L NSI++FFRL S G + K+++LK+L N AENP M +
Sbjct: 484 AVQVVGLKFLTNMTITNDYQHLLVNSIANFFRLLSQGGGKIKVEILKILSNFAENPDMLK 543
Query: 279 ELLRAQVPSSLGSLFNKKENKEVILKLLVIFENINDNFKWEENEPTQNQFGEGSLFFFLK 338
+LL QVP+S SL+N E+++ L +FE I DN + E +F +GSLF+
Sbjct: 544 KLLSTQVPASFSSLYNSYVESEILINALTLFEIIYDNLRAEVF--NYREFNKGSLFYLCT 601
Query: 339 EFQVCADKVLGIESHHDFLVKVKVGKFMAK 368
VC K+ + +HHD LVKVKV K + K
Sbjct: 602 TSGVCVKKIRALANHHDLLVKVKVIKLVNK 631
Score = 54.7 bits (130), Expect = 1e-07
Identities = 40/110 (36%), Positives = 51/110 (46%), Gaps = 7/110 (6%)
Query: 1 MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCSGARYNDW 60
M R G V AG+VIGAGA YC+Y+ TRGR Q K++MA+ + V G + A
Sbjct: 1 MSRVRDAGCVAAGIVIGAGAWYCVYKYTRGRDQTKKRMAKPKNRAVAGTGARARAGLRAG 60
Query: 61 SDDDDDSNESKSIVWYPPWARIGTEAGTRARARARARATRARRAVQKRAS 110
D S + P + EA RA+ A A T AV AS
Sbjct: 61 FTIDLGSG-------FSPPTPVRAEAEDRAQDEASALDTVGAEAVAPAAS 103
>gi|29540562 ALEX2 protein [Homo sapiens]
Length = 632
Score = 265 bits (676), Expect = 7e-71
Identities = 144/330 (43%), Positives = 204/330 (61%), Gaps = 23/330 (6%)
Query: 39 AEGGSGDVDDAGDCSGARYNDWSDDDDDSNESKSIVWYPPWARIGTEAGTRARARARARA 98
A GG + + D + W+D + DS+ +E T+ R R R
Sbjct: 325 ANGGQAFLAEVPDSEEGE-SGWTDTESDSD---------------SEPETQRRGRGRRPV 368
Query: 99 TRARRAVQKRASPNSDDTVLSPQELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDI 158
A+QKR P D +L ++L+KVL L++ S+ P+I + AL+ L NNA Y+ N++
Sbjct: 369 -----AMQKRPFPYEIDEILGVRDLRKVLALLQKSDDPFIQQVALLTLSNNANYSCNQET 423
Query: 159 IRDLGGLPIVAKILNTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNS 218
IR LGGLPI+A ++N DP +KEKAL+ +NNLS N ENQ RL+VYMN+V DD + S LNS
Sbjct: 424 IRKLGGLPIIANMINKTDPHIKEKALMAMNNLSENYENQGRLQVYMNKVMDDIMASNLNS 483
Query: 219 SVQLAGLRLLTNMTVTNEYQHMLANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTR 278
+VQ+ GL+ LTNMT+TN+YQH+L NSI++FFRL S G + K+++LK+L N AENP M +
Sbjct: 484 AVQVVGLKFLTNMTITNDYQHLLVNSIANFFRLLSQGGGKIKVEILKILSNFAENPDMLK 543
Query: 279 ELLRAQVPSSLGSLFNKKENKEVILKLLVIFENINDNFKWEENEPTQNQFGEGSLFFFLK 338
+LL QVP+S SL+N E+++ L +FE I DN + E +F +GSLF+
Sbjct: 544 KLLSTQVPASFSSLYNSYVESEILINALTLFEIIYDNLRAEVF--NYREFNKGSLFYLCT 601
Query: 339 EFQVCADKVLGIESHHDFLVKVKVGKFMAK 368
VC K+ + +HHD LVKVKV K + K
Sbjct: 602 TSGVCVKKIRALANHHDLLVKVKVIKLVNK 631
Score = 54.7 bits (130), Expect = 1e-07
Identities = 40/110 (36%), Positives = 51/110 (46%), Gaps = 7/110 (6%)
Query: 1 MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCSGARYNDW 60
M R G V AG+VIGAGA YC+Y+ TRGR Q K++MA+ + V G + A
Sbjct: 1 MSRVRDAGCVAAGIVIGAGAWYCVYKYTRGRDQTKKRMAKPKNRAVAGTGARARAGLRAG 60
Query: 61 SDDDDDSNESKSIVWYPPWARIGTEAGTRARARARARATRARRAVQKRAS 110
D S + P + EA RA+ A A T AV AS
Sbjct: 61 FTIDLGSG-------FSPPTPVRAEAEDRAQDEASALDTVGAEAVAPAAS 103
>gi|238776793 SVH protein isoform b [Homo sapiens]
Length = 308
Score = 262 bits (669), Expect = 4e-70
Identities = 145/283 (51%), Positives = 196/283 (69%), Gaps = 3/283 (1%)
Query: 88 TRARARA-RARATRARRAVQKRASPNSDDTVLSPQELQKVLCLVEMSEKPYILEAALIAL 146
TR R R R R+ ++ + + DD VL+ ++LQK+L L+E +E P I+E ALI L
Sbjct: 28 TRGRRRGDRELGIRSSKSAEDLTDGSYDD-VLNAEQLQKLLYLLESTEDPVIIERALITL 86
Query: 147 GNNAAYAFNRDIIRDLGGLPIVAKILNTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQ 206
GNNAA++ N+ IIR+LGG+PIVA +N + +KEKAL LNNLSVN ENQ ++K+Y++Q
Sbjct: 87 GNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYISQ 146
Query: 207 VCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQHMLANSISDFFRLFSAGNEETKLQVLKL 266
VC+D + LNS+VQLAGL LLTNMTVTN++QHML + I+D F++ GN TK+QVLKL
Sbjct: 147 VCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTKVQVLKL 206
Query: 267 LLNLAENPAMTRELLRAQVPSSLGSLFNKKENKEVILKLLVIFENINDNFKWEENEPTQN 326
LLNL+ENPAMT LLRAQV SS SL++ KE++L++L +F+NI + K E + Q
Sbjct: 207 LLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQP 266
Query: 327 QFGEGSLFFFLKEFQVCADKVLGIESHHDFLVKVKVGKFMAKL 369
F EGSLFF L + CA K+ + HHD VK KV + K+
Sbjct: 267 TFTEGSLFFLL-HGEECAQKIRALVDHHDAEVKEKVVTIIPKI 308
>gi|239757861 PREDICTED: similar to armadillo repeat containing,
X-linked 4 [Homo sapiens]
Length = 2382
Score = 236 bits (602), Expect = 3e-62
Identities = 117/253 (46%), Positives = 183/253 (72%), Gaps = 1/253 (0%)
Query: 118 LSPQELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDIIRDLGGLPIVAKILNTRDP 177
+ P++L+K++C++EM+E P + E A AL N+A Y+++ +++R++GG+ ++ +LN P
Sbjct: 2130 MDPRDLEKLICMIEMTEDPSVHEIANNALYNSADYSYSHEVVRNVGGISVIESLLNNPYP 2189
Query: 178 IVKEKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSSVQLAGLRLLTNMTVTNEY 237
V++KAL LNN+SV AEN R++K Y+NQVC+DT+T LNS+VQLAGLRL+ ++T+T+EY
Sbjct: 2190 SVRQKALNALNNISVAAENHRKVKTYLNQVCEDTVTYPLNSNVQLAGLRLIRHLTITSEY 2249
Query: 238 QHMLANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTRELLRAQVPSSLGSLFNKKE 297
QHM+ N IS+F RL + G+ ETK VL +LLN ++NP+MT++LL A P+SL ++F+KKE
Sbjct: 2250 QHMVTNYISEFLRLLTVGSGETKDHVLGMLLNFSKNPSMTKDLLIANAPTSLINIFSKKE 2309
Query: 298 NKEVILKLLVIFENINDNFKWEENEPTQNQFGEGSLFFFLKEFQVCADKVLGIESH-HDF 356
KE IL L +FENIN +FK TQ++F + SL+F + + CA K+ + + +D
Sbjct: 2310 TKENILNALSLFENINYHFKRRAKAFTQDKFSKNSLYFLFQRPKACAKKLRALAAECNDP 2369
Query: 357 LVKVKVGKFMAKL 369
VK +V ++KL
Sbjct: 2370 EVKERVELLISKL 2382
Score = 55.8 bits (133), Expect = 6e-08
Identities = 25/43 (58%), Positives = 31/43 (72%)
Query: 1 MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGS 43
MG ++VGWVTAGLVI AG CY IY+ T+GR Q+ +A GS
Sbjct: 93 MGRIQEVGWVTAGLVIWAGTCYYIYKFTKGRAQSVRTLARNGS 135
>gi|169165522 PREDICTED: similar to SVH protein isoform 1 [Homo
sapiens]
Length = 284
Score = 214 bits (546), Expect = 8e-56
Identities = 126/283 (44%), Positives = 175/283 (61%), Gaps = 27/283 (9%)
Query: 88 TRARARA-RARATRARRAVQKRASPNSDDTVLSPQELQKVLCLVEMSEKPYILEAALIAL 146
TR R R R R+ ++ + + DD VL+ ++LQK+L L+E +E P I+E ALI L
Sbjct: 28 TRGRRRGDRELGIRSSKSAEDLTDGSYDD-VLNAEQLQKLLYLLESTEDPVIIERALITL 86
Query: 147 GNNAAYAFNRDIIRDLGGLPIVAKILNTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQ 206
GNNAA++ N+ IIR+LGG+PIVA +N + +KEKAL LNNLSVN ENQ ++K+Y++Q
Sbjct: 87 GNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYISQ 146
Query: 207 VCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQHMLANSISDFFRLFSAGNEETKLQVLKL 266
VC+D + LNS+VQLAGLRLLTNMTVTN++QHML + I+D F++ GN TK
Sbjct: 147 VCEDVFSGPLNSAVQLAGLRLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTK------ 200
Query: 267 LLNLAENPAMTRELLRAQVPSSLGSLFNKKENKEVILKLLVIFENINDNFKWEENEPTQN 326
V SS SL++ KE++L++L +F+NI + K E + Q
Sbjct: 201 ------------------VDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQP 242
Query: 327 QFGEGSLFFFLKEFQVCADKVLGIESHHDFLVKVKVGKFMAKL 369
F EGSLFF L + CA K+ + HHD VK KV + K+
Sbjct: 243 TFTEGSLFFLL-HGEECAQKIRALVDHHDAEVKEKVVTIIPKI 284
Score = 61.6 bits (148), Expect = 1e-09
Identities = 28/53 (52%), Positives = 35/53 (66%)
Query: 1 MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCS 53
MG R GWV AGL++GAGACYCIYRLTRGR++ ++ S +D D S
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGS 53
>gi|238776797 SVH protein isoform e [Homo sapiens]
Length = 284
Score = 212 bits (540), Expect = 4e-55
Identities = 125/283 (44%), Positives = 174/283 (61%), Gaps = 27/283 (9%)
Query: 88 TRARARA-RARATRARRAVQKRASPNSDDTVLSPQELQKVLCLVEMSEKPYILEAALIAL 146
TR R R R R+ ++ + + DD VL+ ++LQK+L L+E +E P I+E ALI L
Sbjct: 28 TRGRRRGDRELGIRSSKSAEDLTDGSYDD-VLNAEQLQKLLYLLESTEDPVIIERALITL 86
Query: 147 GNNAAYAFNRDIIRDLGGLPIVAKILNTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQ 206
GNNAA++ N+ IIR+LGG+PIVA +N + +KEKAL LNNLSVN ENQ ++K+Y++Q
Sbjct: 87 GNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYISQ 146
Query: 207 VCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQHMLANSISDFFRLFSAGNEETKLQVLKL 266
VC+D + LNS+VQLAGL LLTNMTVTN++QHML + I+D F++ GN TK
Sbjct: 147 VCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTK------ 200
Query: 267 LLNLAENPAMTRELLRAQVPSSLGSLFNKKENKEVILKLLVIFENINDNFKWEENEPTQN 326
V SS SL++ KE++L++L +F+NI + K E + Q
Sbjct: 201 ------------------VDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQP 242
Query: 327 QFGEGSLFFFLKEFQVCADKVLGIESHHDFLVKVKVGKFMAKL 369
F EGSLFF L + CA K+ + HHD VK KV + K+
Sbjct: 243 TFTEGSLFFLL-HGEECAQKIRALVDHHDAEVKEKVVTIIPKI 284
Score = 61.6 bits (148), Expect = 1e-09
Identities = 28/53 (52%), Positives = 35/53 (66%)
Query: 1 MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCS 53
MG R GWV AGL++GAGACYCIYRLTRGR++ ++ S +D D S
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGS 53
>gi|169165931 PREDICTED: similar to SVH protein isoform 1 [Homo
sapiens]
Length = 284
Score = 211 bits (538), Expect = 7e-55
Identities = 124/283 (43%), Positives = 175/283 (61%), Gaps = 27/283 (9%)
Query: 88 TRARARA-RARATRARRAVQKRASPNSDDTVLSPQELQKVLCLVEMSEKPYILEAALIAL 146
TR R R R R+ ++ + + DD VL+ ++LQK+L L+E +E P I+E ALI L
Sbjct: 28 TRGRRRGDRELGIRSSKSAEDLTDGSYDD-VLNAEQLQKLLYLLESTEDPVIIERALITL 86
Query: 147 GNNAAYAFNRDIIRDLGGLPIVAKILNTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQ 206
GNNAA++ N+ IIR+LGG+PIVA +N + +K+KAL LNNLSVN ENQ ++K+Y++Q
Sbjct: 87 GNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKDKALNALNNLSVNVENQIKIKIYISQ 146
Query: 207 VCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQHMLANSISDFFRLFSAGNEETKLQVLKL 266
VC+D + LNS+VQLAGLRLLTNMTVTN++QHML + I+D F++ GN TK
Sbjct: 147 VCEDVFSGPLNSAVQLAGLRLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTK------ 200
Query: 267 LLNLAENPAMTRELLRAQVPSSLGSLFNKKENKEVILKLLVIFENINDNFKWEENEPTQN 326
V SS SL++ KE++L++L +F++I + K E + Q
Sbjct: 201 ------------------VDSSFLSLYDSHVAKEILLRVLTLFQHIKNCLKIEGHLAVQP 242
Query: 327 QFGEGSLFFFLKEFQVCADKVLGIESHHDFLVKVKVGKFMAKL 369
F EGSLFF L + CA K+ + HHD VK KV + K+
Sbjct: 243 TFTEGSLFFLL-HGEECAQKIRALVDHHDAEVKEKVVTIIPKI 284
Score = 61.6 bits (148), Expect = 1e-09
Identities = 28/53 (52%), Positives = 35/53 (66%)
Query: 1 MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCS 53
MG R GWV AGL++GAGACYCIYRLTRGR++ ++ S +D D S
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGS 53
>gi|113414573 PREDICTED: similar to SVH protein isoform 2 [Homo
sapiens]
Length = 284
Score = 211 bits (538), Expect = 7e-55
Identities = 124/283 (43%), Positives = 175/283 (61%), Gaps = 27/283 (9%)
Query: 88 TRARARA-RARATRARRAVQKRASPNSDDTVLSPQELQKVLCLVEMSEKPYILEAALIAL 146
TR R R R R+ ++ + + DD VL+ ++LQK+L L+E +E P I+E ALI L
Sbjct: 28 TRGRRRGDRELGIRSSKSAEDLTDGSYDD-VLNAEQLQKLLYLLESTEDPVIIERALITL 86
Query: 147 GNNAAYAFNRDIIRDLGGLPIVAKILNTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQ 206
GNNAA++ N+ IIR+LGG+PIVA +N + +K+KAL LNNLSVN ENQ ++K+Y++Q
Sbjct: 87 GNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKDKALNALNNLSVNVENQIKIKIYISQ 146
Query: 207 VCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQHMLANSISDFFRLFSAGNEETKLQVLKL 266
VC+D + LNS+VQLAGLRLLTNMTVTN++QHML + I+D F++ GN TK
Sbjct: 147 VCEDVFSGPLNSAVQLAGLRLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTK------ 200
Query: 267 LLNLAENPAMTRELLRAQVPSSLGSLFNKKENKEVILKLLVIFENINDNFKWEENEPTQN 326
V SS SL++ KE++L++L +F++I + K E + Q
Sbjct: 201 ------------------VDSSFLSLYDSHVAKEILLRVLTLFQHIKNCLKIEGHLAVQP 242
Query: 327 QFGEGSLFFFLKEFQVCADKVLGIESHHDFLVKVKVGKFMAKL 369
F EGSLFF L + CA K+ + HHD VK KV + K+
Sbjct: 243 TFTEGSLFFLL-HGEECAQKIRALVDHHDAEVKEKVVTIIPKI 284
Score = 61.6 bits (148), Expect = 1e-09
Identities = 28/53 (52%), Positives = 35/53 (66%)
Query: 1 MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCS 53
MG R GWV AGL++GAGACYCIYRLTRGR++ ++ S +D D S
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGS 53
>gi|34147335 armadillo repeat containing, X-linked 6 [Homo sapiens]
Length = 300
Score = 176 bits (447), Expect = 2e-44
Identities = 115/317 (36%), Positives = 172/317 (54%), Gaps = 34/317 (10%)
Query: 1 MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCSGARYNDW 60
MG AR+VGW+ AGL+IGAGACYC+Y+LT GR + EK+ E G +W
Sbjct: 1 MGRAREVGWMAAGLMIGAGACYCVYKLTIGR-DDSEKLEEEGE--------------EEW 45
Query: 61 SDDDDDSNESKSIVWYP------------PWARIGTEAGTRARARARARATRARRAVQKR 108
DDD + +E + +W+ W G GT R +A RA +++R
Sbjct: 46 -DDDQELDEEEPDIWFDFETMARPWTEDGDWTEPGAPGGTEDRPSGGGKANRA-HPIKQR 103
Query: 109 ASPNSDDTVLSPQELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDIIRDLGGLPIV 168
P S Q + C++++S+ +I L A +A + F++DI L L +
Sbjct: 104 PFPYEHKNTWSAQNCKNGSCVLDLSKCLFIQGKLLFAEPKDAGFPFSQDINSHLASLSMA 163
Query: 169 AKILNTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSSVQLAGLRLL 228
T DP V+E AL +NL+ + E+Q ++K+Y+N+VC +T++ NS +Q AGL LL
Sbjct: 164 RNTSPTPDPTVRE-ALCAPDNLNASIESQGQIKMYINEVCRETVSRCCNSFLQQAGLNLL 222
Query: 229 TNMTVTNEYQHMLANSISDF-FRLFSAGNEETKLQVLKLLLNLAENPAMTRELLRAQVPS 287
+MTV N +MLA S SD F L S G+ K+QVLK L+ L+E P + EL+ AQ+
Sbjct: 223 ISMTVIN---NMLAKSASDLKFPLISEGSGCAKVQVLKPLMGLSEKPVLAGELVGAQMLF 279
Query: 288 SLGSLFNKKENKEVILK 304
S SLF + N+E++L+
Sbjct: 280 SFMSLFIRNGNREILLE 296
>gi|57546906 armadillo repeat containing, X-linked 6 [Homo sapiens]
Length = 300
Score = 176 bits (447), Expect = 2e-44
Identities = 115/317 (36%), Positives = 172/317 (54%), Gaps = 34/317 (10%)
Query: 1 MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCSGARYNDW 60
MG AR+VGW+ AGL+IGAGACYC+Y+LT GR + EK+ E G +W
Sbjct: 1 MGRAREVGWMAAGLMIGAGACYCVYKLTIGR-DDSEKLEEEGE--------------EEW 45
Query: 61 SDDDDDSNESKSIVWYP------------PWARIGTEAGTRARARARARATRARRAVQKR 108
DDD + +E + +W+ W G GT R +A RA +++R
Sbjct: 46 -DDDQELDEEEPDIWFDFETMARPWTEDGDWTEPGAPGGTEDRPSGGGKANRA-HPIKQR 103
Query: 109 ASPNSDDTVLSPQELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDIIRDLGGLPIV 168
P S Q + C++++S+ +I L A +A + F++DI L L +
Sbjct: 104 PFPYEHKNTWSAQNCKNGSCVLDLSKCLFIQGKLLFAEPKDAGFPFSQDINSHLASLSMA 163
Query: 169 AKILNTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSSVQLAGLRLL 228
T DP V+E AL +NL+ + E+Q ++K+Y+N+VC +T++ NS +Q AGL LL
Sbjct: 164 RNTSPTPDPTVRE-ALCAPDNLNASIESQGQIKMYINEVCRETVSRCCNSFLQQAGLNLL 222
Query: 229 TNMTVTNEYQHMLANSISDF-FRLFSAGNEETKLQVLKLLLNLAENPAMTRELLRAQVPS 287
+MTV N +MLA S SD F L S G+ K+QVLK L+ L+E P + EL+ AQ+
Sbjct: 223 ISMTVIN---NMLAKSASDLKFPLISEGSGCAKVQVLKPLMGLSEKPVLAGELVGAQMLF 279
Query: 288 SLGSLFNKKENKEVILK 304
S SLF + N+E++L+
Sbjct: 280 SFMSLFIRNGNREILLE 296
>gi|169165524 PREDICTED: similar to SVH protein isoform 2 [Homo
sapiens]
Length = 253
Score = 156 bits (394), Expect = 3e-38
Identities = 105/283 (37%), Positives = 148/283 (52%), Gaps = 58/283 (20%)
Query: 88 TRARARA-RARATRARRAVQKRASPNSDDTVLSPQELQKVLCLVEMSEKPYILEAALIAL 146
TR R R R R+ ++ + + DD VL+ ++LQK+L L+E +E P I+E ALI L
Sbjct: 28 TRGRRRGDRELGIRSSKSAEDLTDGSYDD-VLNAEQLQKLLYLLESTEDPVIIERALITL 86
Query: 147 GNNAAYAFNRDIIRDLGGLPIVAKILNTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQ 206
GNNAA++ N+ IIR+LGG+PIVA +N + +KEKAL LNNLSVN ENQ ++K+Y++Q
Sbjct: 87 GNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYISQ 146
Query: 207 VCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQHMLANSISDFFRLFSAGNEETKLQVLKL 266
VC+D + LNS+V L GN TK
Sbjct: 147 VCEDVFSGPLNSAVLL-------------------------------TGNGNTK------ 169
Query: 267 LLNLAENPAMTRELLRAQVPSSLGSLFNKKENKEVILKLLVIFENINDNFKWEENEPTQN 326
V SS SL++ KE++L++L +F+NI + K E + Q
Sbjct: 170 ------------------VDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQP 211
Query: 327 QFGEGSLFFFLKEFQVCADKVLGIESHHDFLVKVKVGKFMAKL 369
F EGSLFF L + CA K+ + HHD VK KV + K+
Sbjct: 212 TFTEGSLFFLL-HGEECAQKIRALVDHHDAEVKEKVVTIIPKI 253
Score = 61.6 bits (148), Expect = 1e-09
Identities = 28/53 (52%), Positives = 35/53 (66%)
Query: 1 MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCS 53
MG R GWV AGL++GAGACYCIYRLTRGR++ ++ S +D D S
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGS 53
>gi|238776799 SVH protein isoform d [Homo sapiens]
Length = 249
Score = 155 bits (392), Expect = 6e-38
Identities = 108/283 (38%), Positives = 148/283 (52%), Gaps = 62/283 (21%)
Query: 88 TRARARA-RARATRARRAVQKRASPNSDDTVLSPQELQKVLCLVEMSEKPYILEAALIAL 146
TR R R R R+ ++ + + DD VL+ ++LQK+L L+E +E P I+E ALI L
Sbjct: 28 TRGRRRGDRELGIRSSKSAEDLTDGSYDD-VLNAEQLQKLLYLLESTEDPVIIERALITL 86
Query: 147 GNNAAYAFNRDIIRDLGGLPIVAKILNTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQ 206
GNNAA++ N+ IIR+LGG+PIVA +N + +KEKAL LNNLSVN ENQ ++KV +
Sbjct: 87 GNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKVQV-- 144
Query: 207 VCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQHMLANSISDFFRLFSAGNEETKLQVLKL 266
L+LL N
Sbjct: 145 ------------------LKLLLN------------------------------------ 150
Query: 267 LLNLAENPAMTRELLRAQVPSSLGSLFNKKENKEVILKLLVIFENINDNFKWEENEPTQN 326
L+ENPAMT LLRAQV SS SL++ KE++L++L +F+NI + K E + Q
Sbjct: 151 ---LSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQP 207
Query: 327 QFGEGSLFFFLKEFQVCADKVLGIESHHDFLVKVKVGKFMAKL 369
F EGSLFF L + CA K+ + HHD VK KV + K+
Sbjct: 208 TFTEGSLFFLL-HGEECAQKIRALVDHHDAEVKEKVVTIIPKI 249
Score = 61.6 bits (148), Expect = 1e-09
Identities = 28/53 (52%), Positives = 35/53 (66%)
Query: 1 MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCS 53
MG R GWV AGL++GAGACYCIYRLTRGR++ ++ S +D D S
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGS 53
>gi|41054846 armadillo repeat containing, X-linked 5 [Homo sapiens]
Length = 558
Score = 153 bits (387), Expect = 2e-37
Identities = 93/254 (36%), Positives = 155/254 (61%), Gaps = 4/254 (1%)
Query: 118 LSPQELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDIIRDLGGLPIVAKILNTRDP 177
L P+E K++ L+++++ P+I E A + +G + AY F +DII D+G ++ ++N +P
Sbjct: 307 LEPKEFDKLVALLKLTKDPFIHEIATMIMGISPAYPFTQDIIHDVGITVMIENLVN--NP 364
Query: 178 IVKEK--ALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSSVQLAGLRLLTNMTVTN 235
VKE AL ++++ S ++E + + Y++QVC I+ LNS VQLAGL+LL ++++
Sbjct: 365 NVKEHPGALSMVDDSSESSEEPKSGESYIHQVCKGIISCPLNSPVQLAGLKLLGHLSIKF 424
Query: 236 EYQHMLANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTRELLRAQVPSSLGSLFNK 295
E +++ + I DF L + G+ +TK VLK+ L++N A TREL+ A+V SSL + FNK
Sbjct: 425 EDHYVITSYIPDFLTLLNKGSVKTKFYVLKVFSCLSKNHANTRELISAKVLSSLVAPFNK 484
Query: 296 KENKEVILKLLVIFENINDNFKWEENEPTQNQFGEGSLFFFLKEFQVCADKVLGIESHHD 355
E+K IL ++ IFENIN FK + T+ +F + L +E + K+ + H D
Sbjct: 485 NESKANILNIIEIFENINFQFKTKAKLFTKEKFTKSELISIFQEAKQFGQKLQDLAEHSD 544
Query: 356 FLVKVKVGKFMAKL 369
V+ KV + + KL
Sbjct: 545 PEVRDKVIRLILKL 558
>gi|113415138 PREDICTED: similar to SVH protein isoform 2 [Homo
sapiens]
Length = 253
Score = 153 bits (386), Expect = 3e-37
Identities = 103/283 (36%), Positives = 148/283 (52%), Gaps = 58/283 (20%)
Query: 88 TRARARA-RARATRARRAVQKRASPNSDDTVLSPQELQKVLCLVEMSEKPYILEAALIAL 146
TR R R R R+ ++ + + DD VL+ ++LQK+L L+E +E P I+E ALI L
Sbjct: 28 TRGRRRGDRELGIRSSKSAEDLTDGSYDD-VLNAEQLQKLLYLLESTEDPVIIERALITL 86
Query: 147 GNNAAYAFNRDIIRDLGGLPIVAKILNTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQ 206
GNNAA++ N+ IIR+LGG+PIVA +N + +K+KAL LNNLSVN ENQ ++K+Y++Q
Sbjct: 87 GNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKDKALNALNNLSVNVENQIKIKIYISQ 146
Query: 207 VCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQHMLANSISDFFRLFSAGNEETKLQVLKL 266
VC+D + LNS+V L GN TK
Sbjct: 147 VCEDVFSGPLNSAVLL-------------------------------TGNGNTK------ 169
Query: 267 LLNLAENPAMTRELLRAQVPSSLGSLFNKKENKEVILKLLVIFENINDNFKWEENEPTQN 326
V SS SL++ KE++L++L +F++I + K E + Q
Sbjct: 170 ------------------VDSSFLSLYDSHVAKEILLRVLTLFQHIKNCLKIEGHLAVQP 211
Query: 327 QFGEGSLFFFLKEFQVCADKVLGIESHHDFLVKVKVGKFMAKL 369
F EGSLFF L + CA K+ + HHD VK KV + K+
Sbjct: 212 TFTEGSLFFLL-HGEECAQKIRALVDHHDAEVKEKVVTIIPKI 253
Score = 61.6 bits (148), Expect = 1e-09
Identities = 28/53 (52%), Positives = 35/53 (66%)
Query: 1 MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCS 53
MG R GWV AGL++GAGACYCIYRLTRGR++ ++ S +D D S
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGS 53
>gi|169165133 PREDICTED: similar to SVH protein isoform 1 [Homo
sapiens]
Length = 253
Score = 153 bits (386), Expect = 3e-37
Identities = 103/283 (36%), Positives = 148/283 (52%), Gaps = 58/283 (20%)
Query: 88 TRARARA-RARATRARRAVQKRASPNSDDTVLSPQELQKVLCLVEMSEKPYILEAALIAL 146
TR R R R R+ ++ + + DD VL+ ++LQK+L L+E +E P I+E ALI L
Sbjct: 28 TRGRRRGDRELGIRSSKSAEDLTDGSYDD-VLNAEQLQKLLYLLESTEDPVIIERALITL 86
Query: 147 GNNAAYAFNRDIIRDLGGLPIVAKILNTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQ 206
GNNAA++ N+ IIR+LGG+PIVA +N + +K+KAL LNNLSVN ENQ ++K+Y++Q
Sbjct: 87 GNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKDKALNALNNLSVNVENQIKIKIYISQ 146
Query: 207 VCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQHMLANSISDFFRLFSAGNEETKLQVLKL 266
VC+D + LNS+V L GN TK
Sbjct: 147 VCEDVFSGPLNSAVLL-------------------------------TGNGNTK------ 169
Query: 267 LLNLAENPAMTRELLRAQVPSSLGSLFNKKENKEVILKLLVIFENINDNFKWEENEPTQN 326
V SS SL++ KE++L++L +F++I + K E + Q
Sbjct: 170 ------------------VDSSFLSLYDSHVAKEILLRVLTLFQHIKNCLKIEGHLAVQP 211
Query: 327 QFGEGSLFFFLKEFQVCADKVLGIESHHDFLVKVKVGKFMAKL 369
F EGSLFF L + CA K+ + HHD VK KV + K+
Sbjct: 212 TFTEGSLFFLL-HGEECAQKIRALVDHHDAEVKEKVVTIIPKI 253
Score = 61.6 bits (148), Expect = 1e-09
Identities = 28/53 (52%), Positives = 35/53 (66%)
Query: 1 MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCS 53
MG R GWV AGL++GAGACYCIYRLTRGR++ ++ S +D D S
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGS 53
>gi|238776795 SVH protein isoform c [Homo sapiens]
Length = 284
Score = 144 bits (363), Expect = 1e-34
Identities = 116/371 (31%), Positives = 167/371 (45%), Gaps = 89/371 (23%)
Query: 1 MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCSGARYNDW 60
MG R GWV AGL++GAGACYCIYRLTRGR++ ++ S +GA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKS-------AGALEEGT 53
Query: 61 SDDDDDSNESKSIVWYPPWARIGTEAGTRARARARA--RATRARRAVQKRASPNSDDTVL 118
S+ G G AR + + ++ + + + S D VL
Sbjct: 54 SE--------------------GQLCGRSARPQTGGTWESQWSKTSQPEDLTDGSYDDVL 93
Query: 119 SPQELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDIIRDLGGLPIVAKILNTRDPI 178
+ ++LQK+L L+E +T DP+
Sbjct: 94 NAEQLQKLLYLLE-----------------------------------------STEDPV 112
Query: 179 VKEKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQ 238
+ E+ALI L N + + NQ ++ + N S++ L L N++V E Q
Sbjct: 113 IIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQ 172
Query: 239 HMLANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTRELLRAQVPSSLGSLFNKKEN 298
+ K+QVLKLLLNL+ENPAMT LLRAQV SS SL++
Sbjct: 173 IKI------------------KVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVA 214
Query: 299 KEVILKLLVIFENINDNFKWEENEPTQNQFGEGSLFFFLKEFQVCADKVLGIESHHDFLV 358
KE++L++L +F+NI + K E + Q F EGSLFF L + CA K+ + HHD V
Sbjct: 215 KEILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLL-HGEECAQKIRALVDHHDAEV 273
Query: 359 KVKVGKFMAKL 369
K KV + K+
Sbjct: 274 KEKVVTIIPKI 284
>gi|150378528 G protein-coupled receptor associated sorting protein 1
[Homo sapiens]
Length = 1395
Score = 137 bits (345), Expect = 2e-32
Identities = 73/202 (36%), Positives = 122/202 (60%)
Query: 118 LSPQELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDIIRDLGGLPIVAKILNTRDP 177
+ +E +++L L+E P+I E + IA+G +A F RD IRD G + ++ +LN
Sbjct: 1151 IGSEEFEELLLLMEKIRDPFIHEISKIAMGMRSASQFTRDFIRDSGVVSLIETLLNYPSS 1210
Query: 178 IVKEKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSSVQLAGLRLLTNMTVTNEY 237
V+ L + ++ N ++ Y+ +VC++T+ ++S QL+G+R++ ++T T +Y
Sbjct: 1211 RVRTSFLENMIRMAPPYPNLNIIQTYICKVCEETLAYSVDSPEQLSGIRMIRHLTTTTDY 1270
Query: 238 QHMLANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTRELLRAQVPSSLGSLFNKKE 297
++AN +S F L + GN +T+ VLK+LLNL+EN MT+ELL A+ S LFN++E
Sbjct: 1271 HTLVANYMSGFLSLLATGNAKTRFHVLKMLLNLSENLFMTKELLSAEAVSEFIGLFNREE 1330
Query: 298 NKEVILKLLVIFENINDNFKWE 319
+ I +L IFENI +N K E
Sbjct: 1331 TNDNIQIVLAIFENIGNNIKKE 1352
>gi|150378489 G protein-coupled receptor associated sorting protein 1
[Homo sapiens]
Length = 1395
Score = 137 bits (345), Expect = 2e-32
Identities = 73/202 (36%), Positives = 122/202 (60%)
Query: 118 LSPQELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDIIRDLGGLPIVAKILNTRDP 177
+ +E +++L L+E P+I E + IA+G +A F RD IRD G + ++ +LN
Sbjct: 1151 IGSEEFEELLLLMEKIRDPFIHEISKIAMGMRSASQFTRDFIRDSGVVSLIETLLNYPSS 1210
Query: 178 IVKEKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSSVQLAGLRLLTNMTVTNEY 237
V+ L + ++ N ++ Y+ +VC++T+ ++S QL+G+R++ ++T T +Y
Sbjct: 1211 RVRTSFLENMIRMAPPYPNLNIIQTYICKVCEETLAYSVDSPEQLSGIRMIRHLTTTTDY 1270
Query: 238 QHMLANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTRELLRAQVPSSLGSLFNKKE 297
++AN +S F L + GN +T+ VLK+LLNL+EN MT+ELL A+ S LFN++E
Sbjct: 1271 HTLVANYMSGFLSLLATGNAKTRFHVLKMLLNLSENLFMTKELLSAEAVSEFIGLFNREE 1330
Query: 298 NKEVILKLLVIFENINDNFKWE 319
+ I +L IFENI +N K E
Sbjct: 1331 TNDNIQIVLAIFENIGNNIKKE 1352
>gi|103472136 G protein-coupled receptor associated sorting protein 1
[Homo sapiens]
Length = 1395
Score = 137 bits (345), Expect = 2e-32
Identities = 73/202 (36%), Positives = 122/202 (60%)
Query: 118 LSPQELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDIIRDLGGLPIVAKILNTRDP 177
+ +E +++L L+E P+I E + IA+G +A F RD IRD G + ++ +LN
Sbjct: 1151 IGSEEFEELLLLMEKIRDPFIHEISKIAMGMRSASQFTRDFIRDSGVVSLIETLLNYPSS 1210
Query: 178 IVKEKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSSVQLAGLRLLTNMTVTNEY 237
V+ L + ++ N ++ Y+ +VC++T+ ++S QL+G+R++ ++T T +Y
Sbjct: 1211 RVRTSFLENMIRMAPPYPNLNIIQTYICKVCEETLAYSVDSPEQLSGIRMIRHLTTTTDY 1270
Query: 238 QHMLANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTRELLRAQVPSSLGSLFNKKE 297
++AN +S F L + GN +T+ VLK+LLNL+EN MT+ELL A+ S LFN++E
Sbjct: 1271 HTLVANYMSGFLSLLATGNAKTRFHVLKMLLNLSENLFMTKELLSAEAVSEFIGLFNREE 1330
Query: 298 NKEVILKLLVIFENINDNFKWE 319
+ I +L IFENI +N K E
Sbjct: 1331 TNDNIQIVLAIFENIGNNIKKE 1352
>gi|51702248 G protein-coupled receptor associated sorting protein 2
[Homo sapiens]
Length = 838
Score = 127 bits (318), Expect = 2e-29
Identities = 71/230 (30%), Positives = 129/230 (56%)
Query: 118 LSPQELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDIIRDLGGLPIVAKILNTRDP 177
+ +E ++ L L++ P+I E + IA+G +A F RD IRD G + ++ +LN
Sbjct: 593 IGSEEFEEFLLLMDKIRDPFIHEISKIAMGMRSASQFTRDFIRDSGVVSLIETLLNYPSS 652
Query: 178 IVKEKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSSVQLAGLRLLTNMTVTNEY 237
V+ L + +++ N ++ ++ QVC++T+ ++S QL G+R+L ++T+T +Y
Sbjct: 653 RVRTSFLENMIHMAPPYPNLNMIETFICQVCEETLAHSVDSLEQLTGIRMLRHLTMTIDY 712
Query: 238 QHMLANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTRELLRAQVPSSLGSLFNKKE 297
++AN +S F L + N TK VLK+LLNL+ENPA+ ++L A+ S LFN +E
Sbjct: 713 HTLIANYMSGFLSLLTTANARTKFHVLKMLLNLSENPAVAKKLFSAKALSIFVGLFNIEE 772
Query: 298 NKEVILKLLVIFENINDNFKWEENEPTQNQFGEGSLFFFLKEFQVCADKV 347
+ I ++ +F+NI++ K + + F L +EF+ A ++
Sbjct: 773 TNDNIQIVIKMFQNISNIIKSGKMSLIDDDFSLEPLISAFREFEELAKQL 822
>gi|19923967 G protein-coupled receptor associated sorting protein 2
[Homo sapiens]
Length = 838
Score = 127 bits (318), Expect = 2e-29
Identities = 71/230 (30%), Positives = 129/230 (56%)
Query: 118 LSPQELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDIIRDLGGLPIVAKILNTRDP 177
+ +E ++ L L++ P+I E + IA+G +A F RD IRD G + ++ +LN
Sbjct: 593 IGSEEFEEFLLLMDKIRDPFIHEISKIAMGMRSASQFTRDFIRDSGVVSLIETLLNYPSS 652
Query: 178 IVKEKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSSVQLAGLRLLTNMTVTNEY 237
V+ L + +++ N ++ ++ QVC++T+ ++S QL G+R+L ++T+T +Y
Sbjct: 653 RVRTSFLENMIHMAPPYPNLNMIETFICQVCEETLAHSVDSLEQLTGIRMLRHLTMTIDY 712
Query: 238 QHMLANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTRELLRAQVPSSLGSLFNKKE 297
++AN +S F L + N TK VLK+LLNL+ENPA+ ++L A+ S LFN +E
Sbjct: 713 HTLIANYMSGFLSLLTTANARTKFHVLKMLLNLSENPAVAKKLFSAKALSIFVGLFNIEE 772
Query: 298 NKEVILKLLVIFENINDNFKWEENEPTQNQFGEGSLFFFLKEFQVCADKV 347
+ I ++ +F+NI++ K + + F L +EF+ A ++
Sbjct: 773 TNDNIQIVIKMFQNISNIIKSGKMSLIDDDFSLEPLISAFREFEELAKQL 822
>gi|216547715 basic helix-loop-helix domain containing, class B, 9
[Homo sapiens]
Length = 547
Score = 122 bits (306), Expect = 5e-28
Identities = 65/218 (29%), Positives = 132/218 (60%), Gaps = 1/218 (0%)
Query: 100 RARRAVQKRASPNSDDTVLSPQELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDII 159
R ++ A P + + +E +K++ L++ + P I + A IA+G + + F ++ I
Sbjct: 302 REVNGIKPFACPCKMECYMDSEEFEKLVSLLKSTTDPLIHKIARIAMGVHNVHPFAQEFI 361
Query: 160 RDLGGLPIVAKILNTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSS 219
++G + ++ +L+ P +++K +I LN S + E QR++++++ +C +T++ LNS
Sbjct: 362 NEVGVVTLIESLLSFPSPEMRKKTVITLNPPSGD-ERQRKIELHVKHMCKETMSFPLNSP 420
Query: 220 VQLAGLRLLTNMTVTNEYQHMLANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTRE 279
Q +GL++L +T + +++AN S+ F L S+GN +T+ VLKLLLN++ENP R+
Sbjct: 421 GQQSGLKILGQLTTDFVHHYIVANYFSELFHLLSSGNCKTRNLVLKLLLNMSENPTAARD 480
Query: 280 LLRAQVPSSLGSLFNKKENKEVILKLLVIFENINDNFK 317
++ + ++L +FN+KE K ++ + IF NI ++ +
Sbjct: 481 MINMKALAALKLIFNQKEAKANLVSGVAIFINIKEHIR 518
>gi|216547682 basic helix-loop-helix domain containing, class B, 9
[Homo sapiens]
Length = 547
Score = 122 bits (306), Expect = 5e-28
Identities = 65/218 (29%), Positives = 132/218 (60%), Gaps = 1/218 (0%)
Query: 100 RARRAVQKRASPNSDDTVLSPQELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDII 159
R ++ A P + + +E +K++ L++ + P I + A IA+G + + F ++ I
Sbjct: 302 REVNGIKPFACPCKMECYMDSEEFEKLVSLLKSTTDPLIHKIARIAMGVHNVHPFAQEFI 361
Query: 160 RDLGGLPIVAKILNTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSS 219
++G + ++ +L+ P +++K +I LN S + E QR++++++ +C +T++ LNS
Sbjct: 362 NEVGVVTLIESLLSFPSPEMRKKTVITLNPPSGD-ERQRKIELHVKHMCKETMSFPLNSP 420
Query: 220 VQLAGLRLLTNMTVTNEYQHMLANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTRE 279
Q +GL++L +T + +++AN S+ F L S+GN +T+ VLKLLLN++ENP R+
Sbjct: 421 GQQSGLKILGQLTTDFVHHYIVANYFSELFHLLSSGNCKTRNLVLKLLLNMSENPTAARD 480
Query: 280 LLRAQVPSSLGSLFNKKENKEVILKLLVIFENINDNFK 317
++ + ++L +FN+KE K ++ + IF NI ++ +
Sbjct: 481 MINMKALAALKLIFNQKEAKANLVSGVAIFINIKEHIR 518
>gi|216547672 basic helix-loop-helix domain containing, class B, 9
[Homo sapiens]
Length = 547
Score = 122 bits (306), Expect = 5e-28
Identities = 65/218 (29%), Positives = 132/218 (60%), Gaps = 1/218 (0%)
Query: 100 RARRAVQKRASPNSDDTVLSPQELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDII 159
R ++ A P + + +E +K++ L++ + P I + A IA+G + + F ++ I
Sbjct: 302 REVNGIKPFACPCKMECYMDSEEFEKLVSLLKSTTDPLIHKIARIAMGVHNVHPFAQEFI 361
Query: 160 RDLGGLPIVAKILNTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSS 219
++G + ++ +L+ P +++K +I LN S + E QR++++++ +C +T++ LNS
Sbjct: 362 NEVGVVTLIESLLSFPSPEMRKKTVITLNPPSGD-ERQRKIELHVKHMCKETMSFPLNSP 420
Query: 220 VQLAGLRLLTNMTVTNEYQHMLANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTRE 279
Q +GL++L +T + +++AN S+ F L S+GN +T+ VLKLLLN++ENP R+
Sbjct: 421 GQQSGLKILGQLTTDFVHHYIVANYFSELFHLLSSGNCKTRNLVLKLLLNMSENPTAARD 480
Query: 280 LLRAQVPSSLGSLFNKKENKEVILKLLVIFENINDNFK 317
++ + ++L +FN+KE K ++ + IF NI ++ +
Sbjct: 481 MINMKALAALKLIFNQKEAKANLVSGVAIFINIKEHIR 518
>gi|216547663 basic helix-loop-helix domain containing, class B, 9
[Homo sapiens]
Length = 547
Score = 122 bits (306), Expect = 5e-28
Identities = 65/218 (29%), Positives = 132/218 (60%), Gaps = 1/218 (0%)
Query: 100 RARRAVQKRASPNSDDTVLSPQELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDII 159
R ++ A P + + +E +K++ L++ + P I + A IA+G + + F ++ I
Sbjct: 302 REVNGIKPFACPCKMECYMDSEEFEKLVSLLKSTTDPLIHKIARIAMGVHNVHPFAQEFI 361
Query: 160 RDLGGLPIVAKILNTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSS 219
++G + ++ +L+ P +++K +I LN S + E QR++++++ +C +T++ LNS
Sbjct: 362 NEVGVVTLIESLLSFPSPEMRKKTVITLNPPSGD-ERQRKIELHVKHMCKETMSFPLNSP 420
Query: 220 VQLAGLRLLTNMTVTNEYQHMLANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTRE 279
Q +GL++L +T + +++AN S+ F L S+GN +T+ VLKLLLN++ENP R+
Sbjct: 421 GQQSGLKILGQLTTDFVHHYIVANYFSELFHLLSSGNCKTRNLVLKLLLNMSENPTAARD 480
Query: 280 LLRAQVPSSLGSLFNKKENKEVILKLLVIFENINDNFK 317
++ + ++L +FN+KE K ++ + IF NI ++ +
Sbjct: 481 MINMKALAALKLIFNQKEAKANLVSGVAIFINIKEHIR 518
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.133 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,921,676
Number of Sequences: 37866
Number of extensions: 531045
Number of successful extensions: 2082
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 1927
Number of HSP's gapped (non-prelim): 136
length of query: 379
length of database: 18,247,518
effective HSP length: 104
effective length of query: 275
effective length of database: 14,309,454
effective search space: 3935099850
effective search space used: 3935099850
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.