Guide to the Human Genome
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Search of human proteins with 29540564

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|29540564 armadillo repeat containing, X-linked 3 [Homo
sapiens]
         (379 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|29540566 armadillo repeat containing, X-linked 3 [Homo sapiens]    753   0.0  
gi|29540564 armadillo repeat containing, X-linked 3 [Homo sapiens]    753   0.0  
gi|7705274 armadillo repeat containing, X-linked 3 [Homo sapiens]     753   0.0  
gi|7706143 armadillo repeat containing, X-linked 1 [Homo sapiens]     318   5e-87
gi|31377663 SVH protein isoform a [Homo sapiens]                      295   5e-80
gi|7662162 ALEX2 protein [Homo sapiens]                               265   7e-71
gi|29540562 ALEX2 protein [Homo sapiens]                              265   7e-71
gi|238776793 SVH protein isoform b [Homo sapiens]                     262   4e-70
gi|239757861 PREDICTED: similar to armadillo repeat containing, ...   236   3e-62
gi|169165522 PREDICTED: similar to SVH protein isoform 1 [Homo s...   214   8e-56
gi|238776797 SVH protein isoform e [Homo sapiens]                     212   4e-55
gi|169165931 PREDICTED: similar to SVH protein isoform 1 [Homo s...   211   7e-55
gi|113414573 PREDICTED: similar to SVH protein isoform 2 [Homo s...   211   7e-55
gi|34147335 armadillo repeat containing, X-linked 6 [Homo sapiens]    176   2e-44
gi|57546906 armadillo repeat containing, X-linked 6 [Homo sapiens]    176   2e-44
gi|169165524 PREDICTED: similar to SVH protein isoform 2 [Homo s...   156   3e-38
gi|238776799 SVH protein isoform d [Homo sapiens]                     155   6e-38
gi|41054846 armadillo repeat containing, X-linked 5 [Homo sapiens]    153   2e-37
gi|113415138 PREDICTED: similar to SVH protein isoform 2 [Homo s...   153   3e-37
gi|169165133 PREDICTED: similar to SVH protein isoform 1 [Homo s...   153   3e-37
gi|238776795 SVH protein isoform c [Homo sapiens]                     144   1e-34
gi|150378528 G protein-coupled receptor associated sorting prote...   137   2e-32
gi|150378489 G protein-coupled receptor associated sorting prote...   137   2e-32
gi|103472136 G protein-coupled receptor associated sorting prote...   137   2e-32
gi|51702248 G protein-coupled receptor associated sorting protei...   127   2e-29
gi|19923967 G protein-coupled receptor associated sorting protei...   127   2e-29
gi|216547715 basic helix-loop-helix domain containing, class B, ...   122   5e-28
gi|216547682 basic helix-loop-helix domain containing, class B, ...   122   5e-28
gi|216547672 basic helix-loop-helix domain containing, class B, ...   122   5e-28
gi|216547663 basic helix-loop-helix domain containing, class B, ...   122   5e-28

>gi|29540566 armadillo repeat containing, X-linked 3 [Homo sapiens]
          Length = 379

 Score =  753 bits (1944), Expect = 0.0
 Identities = 379/379 (100%), Positives = 379/379 (100%)

Query: 1   MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCSGARYNDW 60
           MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCSGARYNDW
Sbjct: 1   MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCSGARYNDW 60

Query: 61  SDDDDDSNESKSIVWYPPWARIGTEAGTRARARARARATRARRAVQKRASPNSDDTVLSP 120
           SDDDDDSNESKSIVWYPPWARIGTEAGTRARARARARATRARRAVQKRASPNSDDTVLSP
Sbjct: 61  SDDDDDSNESKSIVWYPPWARIGTEAGTRARARARARATRARRAVQKRASPNSDDTVLSP 120

Query: 121 QELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDIIRDLGGLPIVAKILNTRDPIVK 180
           QELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDIIRDLGGLPIVAKILNTRDPIVK
Sbjct: 121 QELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDIIRDLGGLPIVAKILNTRDPIVK 180

Query: 181 EKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQHM 240
           EKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQHM
Sbjct: 181 EKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQHM 240

Query: 241 LANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTRELLRAQVPSSLGSLFNKKENKE 300
           LANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTRELLRAQVPSSLGSLFNKKENKE
Sbjct: 241 LANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTRELLRAQVPSSLGSLFNKKENKE 300

Query: 301 VILKLLVIFENINDNFKWEENEPTQNQFGEGSLFFFLKEFQVCADKVLGIESHHDFLVKV 360
           VILKLLVIFENINDNFKWEENEPTQNQFGEGSLFFFLKEFQVCADKVLGIESHHDFLVKV
Sbjct: 301 VILKLLVIFENINDNFKWEENEPTQNQFGEGSLFFFLKEFQVCADKVLGIESHHDFLVKV 360

Query: 361 KVGKFMAKLAEHMFPKSQE 379
           KVGKFMAKLAEHMFPKSQE
Sbjct: 361 KVGKFMAKLAEHMFPKSQE 379


>gi|29540564 armadillo repeat containing, X-linked 3 [Homo sapiens]
          Length = 379

 Score =  753 bits (1944), Expect = 0.0
 Identities = 379/379 (100%), Positives = 379/379 (100%)

Query: 1   MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCSGARYNDW 60
           MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCSGARYNDW
Sbjct: 1   MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCSGARYNDW 60

Query: 61  SDDDDDSNESKSIVWYPPWARIGTEAGTRARARARARATRARRAVQKRASPNSDDTVLSP 120
           SDDDDDSNESKSIVWYPPWARIGTEAGTRARARARARATRARRAVQKRASPNSDDTVLSP
Sbjct: 61  SDDDDDSNESKSIVWYPPWARIGTEAGTRARARARARATRARRAVQKRASPNSDDTVLSP 120

Query: 121 QELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDIIRDLGGLPIVAKILNTRDPIVK 180
           QELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDIIRDLGGLPIVAKILNTRDPIVK
Sbjct: 121 QELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDIIRDLGGLPIVAKILNTRDPIVK 180

Query: 181 EKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQHM 240
           EKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQHM
Sbjct: 181 EKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQHM 240

Query: 241 LANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTRELLRAQVPSSLGSLFNKKENKE 300
           LANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTRELLRAQVPSSLGSLFNKKENKE
Sbjct: 241 LANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTRELLRAQVPSSLGSLFNKKENKE 300

Query: 301 VILKLLVIFENINDNFKWEENEPTQNQFGEGSLFFFLKEFQVCADKVLGIESHHDFLVKV 360
           VILKLLVIFENINDNFKWEENEPTQNQFGEGSLFFFLKEFQVCADKVLGIESHHDFLVKV
Sbjct: 301 VILKLLVIFENINDNFKWEENEPTQNQFGEGSLFFFLKEFQVCADKVLGIESHHDFLVKV 360

Query: 361 KVGKFMAKLAEHMFPKSQE 379
           KVGKFMAKLAEHMFPKSQE
Sbjct: 361 KVGKFMAKLAEHMFPKSQE 379


>gi|7705274 armadillo repeat containing, X-linked 3 [Homo sapiens]
          Length = 379

 Score =  753 bits (1944), Expect = 0.0
 Identities = 379/379 (100%), Positives = 379/379 (100%)

Query: 1   MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCSGARYNDW 60
           MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCSGARYNDW
Sbjct: 1   MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCSGARYNDW 60

Query: 61  SDDDDDSNESKSIVWYPPWARIGTEAGTRARARARARATRARRAVQKRASPNSDDTVLSP 120
           SDDDDDSNESKSIVWYPPWARIGTEAGTRARARARARATRARRAVQKRASPNSDDTVLSP
Sbjct: 61  SDDDDDSNESKSIVWYPPWARIGTEAGTRARARARARATRARRAVQKRASPNSDDTVLSP 120

Query: 121 QELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDIIRDLGGLPIVAKILNTRDPIVK 180
           QELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDIIRDLGGLPIVAKILNTRDPIVK
Sbjct: 121 QELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDIIRDLGGLPIVAKILNTRDPIVK 180

Query: 181 EKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQHM 240
           EKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQHM
Sbjct: 181 EKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQHM 240

Query: 241 LANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTRELLRAQVPSSLGSLFNKKENKE 300
           LANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTRELLRAQVPSSLGSLFNKKENKE
Sbjct: 241 LANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTRELLRAQVPSSLGSLFNKKENKE 300

Query: 301 VILKLLVIFENINDNFKWEENEPTQNQFGEGSLFFFLKEFQVCADKVLGIESHHDFLVKV 360
           VILKLLVIFENINDNFKWEENEPTQNQFGEGSLFFFLKEFQVCADKVLGIESHHDFLVKV
Sbjct: 301 VILKLLVIFENINDNFKWEENEPTQNQFGEGSLFFFLKEFQVCADKVLGIESHHDFLVKV 360

Query: 361 KVGKFMAKLAEHMFPKSQE 379
           KVGKFMAKLAEHMFPKSQE
Sbjct: 361 KVGKFMAKLAEHMFPKSQE 379


>gi|7706143 armadillo repeat containing, X-linked 1 [Homo sapiens]
          Length = 453

 Score =  318 bits (815), Expect = 5e-87
 Identities = 188/453 (41%), Positives = 259/453 (57%), Gaps = 84/453 (18%)

Query: 1   MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNK-------------EKMAEGGSGDVD 47
           MG  R+ G V AG+VIGAGACYC+YRL  GR +N+             E   E   G   
Sbjct: 1   MGRTREAGCVAAGVVIGAGACYCVYRLAWGRDENEKIWDEDEESTDTSEIGVETVKGAKT 60

Query: 48  DAGDCSGARYNDWSDDDDDSN-----------------------ESKSIVWY-------- 76
           +AG  SGA+    S+   + +                       E+K+   +        
Sbjct: 61  NAGAGSGAKLQGDSEVKPEVSLGLEDCPGVKEKAHSGSHSGGGLEAKAKALFNTLKEQAS 120

Query: 77  ---PPWARIGTEAG--------------------TRARARARARATRARRAVQKRAS--- 110
                 AR+GT +G                    TR+ +RA  RA+   +   +  S   
Sbjct: 121 AKAGKGARVGTISGNRTLAPSLPCPGGRGGGCHPTRSGSRAGGRASGKSKGKARSKSTRA 180

Query: 111 --------------PNSDDTVLSPQELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNR 156
                         P   D +LS  +LQKVL ++E +  P+I E AL+ LGNNAAY+FN+
Sbjct: 181 PATTWPVRRGKFNFPYKIDDILSAPDLQKVLNILERTNDPFIQEVALVTLGNNAAYSFNQ 240

Query: 157 DIIRDLGGLPIVAKILNTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRL 216
           + IR+LGG+PI+AK++ T+DPI++EK    LNNLSVNAENQ ++K Y++QVCDDT+  RL
Sbjct: 241 NAIRELGGVPIIAKLIKTKDPIIREKTYNALNNLSVNAENQGKIKTYISQVCDDTMVCRL 300

Query: 217 NSSVQLAGLRLLTNMTVTNEYQHMLANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAM 276
           +S+VQ+AGLRLLTNMTVTN YQH+L+ S  DFF L   GN  TK+Q++KL++N  ENPAM
Sbjct: 301 DSAVQMAGLRLLTNMTVTNHYQHLLSYSFPDFFALLFLGNHFTKIQIMKLIINFTENPAM 360

Query: 277 TRELLRAQVPSSLGSLFNKKENKEVILKLLVIFENINDNFKWEENEPTQNQFGEGSLFFF 336
           TREL+  +VPS L SLFNK+ ++E++L +L +FENINDN K E    ++ +F   SLFF 
Sbjct: 361 TRELVSCKVPSELISLFNKEWDREILLNILTLFENINDNIKNEGLASSRKEFSRSSLFFL 420

Query: 337 LKEFQVCADKVLGIESHHDFLVKVKVGKFMAKL 369
            KE  VC  K+  + +H+D +VKVKV K + KL
Sbjct: 421 FKESGVCVKKIKALANHNDLVVKVKVLKVLTKL 453


>gi|31377663 SVH protein isoform a [Homo sapiens]
          Length = 343

 Score =  295 bits (755), Expect = 5e-80
 Identities = 171/371 (46%), Positives = 232/371 (62%), Gaps = 30/371 (8%)

Query: 1   MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCSGARYNDW 60
           MG  R  GWV AGL++GAGACYCIYRLTRGR++   ++    S         +GA     
Sbjct: 1   MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKS-------AGALEEGT 53

Query: 61  SDDDDDSNESKSIVWYPPWARIGTEAGTRARARARA--RATRARRAVQKRASPNSDDTVL 118
           S+                    G   G  AR +      +  ++ +  +  +  S D VL
Sbjct: 54  SE--------------------GQLCGRSARPQTGGTWESQWSKTSQPEDLTDGSYDDVL 93

Query: 119 SPQELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDIIRDLGGLPIVAKILNTRDPI 178
           + ++LQK+L L+E +E P I+E ALI LGNNAA++ N+ IIR+LGG+PIVA  +N  +  
Sbjct: 94  NAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQS 153

Query: 179 VKEKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQ 238
           +KEKAL  LNNLSVN ENQ ++K+Y++QVC+D  +  LNS+VQLAGL LLTNMTVTN++Q
Sbjct: 154 IKEKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQ 213

Query: 239 HMLANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTRELLRAQVPSSLGSLFNKKEN 298
           HML + I+D F++   GN  TK+QVLKLLLNL+ENPAMT  LLRAQV SS  SL++    
Sbjct: 214 HMLHSYITDLFQVLLTGNGNTKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVA 273

Query: 299 KEVILKLLVIFENINDNFKWEENEPTQNQFGEGSLFFFLKEFQVCADKVLGIESHHDFLV 358
           KE++L++L +F+NI +  K E +   Q  F EGSLFF L   + CA K+  +  HHD  V
Sbjct: 274 KEILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLL-HGEECAQKIRALVDHHDAEV 332

Query: 359 KVKVGKFMAKL 369
           K KV   + K+
Sbjct: 333 KEKVVTIIPKI 343


>gi|7662162 ALEX2 protein [Homo sapiens]
          Length = 632

 Score =  265 bits (676), Expect = 7e-71
 Identities = 144/330 (43%), Positives = 204/330 (61%), Gaps = 23/330 (6%)

Query: 39  AEGGSGDVDDAGDCSGARYNDWSDDDDDSNESKSIVWYPPWARIGTEAGTRARARARARA 98
           A GG   + +  D      + W+D + DS+               +E  T+ R R R   
Sbjct: 325 ANGGQAFLAEVPDSEEGE-SGWTDTESDSD---------------SEPETQRRGRGRRPV 368

Query: 99  TRARRAVQKRASPNSDDTVLSPQELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDI 158
                A+QKR  P   D +L  ++L+KVL L++ S+ P+I + AL+ L NNA Y+ N++ 
Sbjct: 369 -----AMQKRPFPYEIDEILGVRDLRKVLALLQKSDDPFIQQVALLTLSNNANYSCNQET 423

Query: 159 IRDLGGLPIVAKILNTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNS 218
           IR LGGLPI+A ++N  DP +KEKAL+ +NNLS N ENQ RL+VYMN+V DD + S LNS
Sbjct: 424 IRKLGGLPIIANMINKTDPHIKEKALMAMNNLSENYENQGRLQVYMNKVMDDIMASNLNS 483

Query: 219 SVQLAGLRLLTNMTVTNEYQHMLANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTR 278
           +VQ+ GL+ LTNMT+TN+YQH+L NSI++FFRL S G  + K+++LK+L N AENP M +
Sbjct: 484 AVQVVGLKFLTNMTITNDYQHLLVNSIANFFRLLSQGGGKIKVEILKILSNFAENPDMLK 543

Query: 279 ELLRAQVPSSLGSLFNKKENKEVILKLLVIFENINDNFKWEENEPTQNQFGEGSLFFFLK 338
           +LL  QVP+S  SL+N     E+++  L +FE I DN + E       +F +GSLF+   
Sbjct: 544 KLLSTQVPASFSSLYNSYVESEILINALTLFEIIYDNLRAEVF--NYREFNKGSLFYLCT 601

Query: 339 EFQVCADKVLGIESHHDFLVKVKVGKFMAK 368
              VC  K+  + +HHD LVKVKV K + K
Sbjct: 602 TSGVCVKKIRALANHHDLLVKVKVIKLVNK 631



 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 40/110 (36%), Positives = 51/110 (46%), Gaps = 7/110 (6%)

Query: 1   MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCSGARYNDW 60
           M   R  G V AG+VIGAGA YC+Y+ TRGR Q K++MA+  +  V   G  + A     
Sbjct: 1   MSRVRDAGCVAAGIVIGAGAWYCVYKYTRGRDQTKKRMAKPKNRAVAGTGARARAGLRAG 60

Query: 61  SDDDDDSNESKSIVWYPPWARIGTEAGTRARARARARATRARRAVQKRAS 110
              D  S        + P   +  EA  RA+  A A  T    AV   AS
Sbjct: 61  FTIDLGSG-------FSPPTPVRAEAEDRAQDEASALDTVGAEAVAPAAS 103


>gi|29540562 ALEX2 protein [Homo sapiens]
          Length = 632

 Score =  265 bits (676), Expect = 7e-71
 Identities = 144/330 (43%), Positives = 204/330 (61%), Gaps = 23/330 (6%)

Query: 39  AEGGSGDVDDAGDCSGARYNDWSDDDDDSNESKSIVWYPPWARIGTEAGTRARARARARA 98
           A GG   + +  D      + W+D + DS+               +E  T+ R R R   
Sbjct: 325 ANGGQAFLAEVPDSEEGE-SGWTDTESDSD---------------SEPETQRRGRGRRPV 368

Query: 99  TRARRAVQKRASPNSDDTVLSPQELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDI 158
                A+QKR  P   D +L  ++L+KVL L++ S+ P+I + AL+ L NNA Y+ N++ 
Sbjct: 369 -----AMQKRPFPYEIDEILGVRDLRKVLALLQKSDDPFIQQVALLTLSNNANYSCNQET 423

Query: 159 IRDLGGLPIVAKILNTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNS 218
           IR LGGLPI+A ++N  DP +KEKAL+ +NNLS N ENQ RL+VYMN+V DD + S LNS
Sbjct: 424 IRKLGGLPIIANMINKTDPHIKEKALMAMNNLSENYENQGRLQVYMNKVMDDIMASNLNS 483

Query: 219 SVQLAGLRLLTNMTVTNEYQHMLANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTR 278
           +VQ+ GL+ LTNMT+TN+YQH+L NSI++FFRL S G  + K+++LK+L N AENP M +
Sbjct: 484 AVQVVGLKFLTNMTITNDYQHLLVNSIANFFRLLSQGGGKIKVEILKILSNFAENPDMLK 543

Query: 279 ELLRAQVPSSLGSLFNKKENKEVILKLLVIFENINDNFKWEENEPTQNQFGEGSLFFFLK 338
           +LL  QVP+S  SL+N     E+++  L +FE I DN + E       +F +GSLF+   
Sbjct: 544 KLLSTQVPASFSSLYNSYVESEILINALTLFEIIYDNLRAEVF--NYREFNKGSLFYLCT 601

Query: 339 EFQVCADKVLGIESHHDFLVKVKVGKFMAK 368
              VC  K+  + +HHD LVKVKV K + K
Sbjct: 602 TSGVCVKKIRALANHHDLLVKVKVIKLVNK 631



 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 40/110 (36%), Positives = 51/110 (46%), Gaps = 7/110 (6%)

Query: 1   MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCSGARYNDW 60
           M   R  G V AG+VIGAGA YC+Y+ TRGR Q K++MA+  +  V   G  + A     
Sbjct: 1   MSRVRDAGCVAAGIVIGAGAWYCVYKYTRGRDQTKKRMAKPKNRAVAGTGARARAGLRAG 60

Query: 61  SDDDDDSNESKSIVWYPPWARIGTEAGTRARARARARATRARRAVQKRAS 110
              D  S        + P   +  EA  RA+  A A  T    AV   AS
Sbjct: 61  FTIDLGSG-------FSPPTPVRAEAEDRAQDEASALDTVGAEAVAPAAS 103


>gi|238776793 SVH protein isoform b [Homo sapiens]
          Length = 308

 Score =  262 bits (669), Expect = 4e-70
 Identities = 145/283 (51%), Positives = 196/283 (69%), Gaps = 3/283 (1%)

Query: 88  TRARARA-RARATRARRAVQKRASPNSDDTVLSPQELQKVLCLVEMSEKPYILEAALIAL 146
           TR R R  R    R+ ++ +     + DD VL+ ++LQK+L L+E +E P I+E ALI L
Sbjct: 28  TRGRRRGDRELGIRSSKSAEDLTDGSYDD-VLNAEQLQKLLYLLESTEDPVIIERALITL 86

Query: 147 GNNAAYAFNRDIIRDLGGLPIVAKILNTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQ 206
           GNNAA++ N+ IIR+LGG+PIVA  +N  +  +KEKAL  LNNLSVN ENQ ++K+Y++Q
Sbjct: 87  GNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYISQ 146

Query: 207 VCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQHMLANSISDFFRLFSAGNEETKLQVLKL 266
           VC+D  +  LNS+VQLAGL LLTNMTVTN++QHML + I+D F++   GN  TK+QVLKL
Sbjct: 147 VCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTKVQVLKL 206

Query: 267 LLNLAENPAMTRELLRAQVPSSLGSLFNKKENKEVILKLLVIFENINDNFKWEENEPTQN 326
           LLNL+ENPAMT  LLRAQV SS  SL++    KE++L++L +F+NI +  K E +   Q 
Sbjct: 207 LLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQP 266

Query: 327 QFGEGSLFFFLKEFQVCADKVLGIESHHDFLVKVKVGKFMAKL 369
            F EGSLFF L   + CA K+  +  HHD  VK KV   + K+
Sbjct: 267 TFTEGSLFFLL-HGEECAQKIRALVDHHDAEVKEKVVTIIPKI 308


>gi|239757861 PREDICTED: similar to armadillo repeat containing,
            X-linked 4 [Homo sapiens]
          Length = 2382

 Score =  236 bits (602), Expect = 3e-62
 Identities = 117/253 (46%), Positives = 183/253 (72%), Gaps = 1/253 (0%)

Query: 118  LSPQELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDIIRDLGGLPIVAKILNTRDP 177
            + P++L+K++C++EM+E P + E A  AL N+A Y+++ +++R++GG+ ++  +LN   P
Sbjct: 2130 MDPRDLEKLICMIEMTEDPSVHEIANNALYNSADYSYSHEVVRNVGGISVIESLLNNPYP 2189

Query: 178  IVKEKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSSVQLAGLRLLTNMTVTNEY 237
             V++KAL  LNN+SV AEN R++K Y+NQVC+DT+T  LNS+VQLAGLRL+ ++T+T+EY
Sbjct: 2190 SVRQKALNALNNISVAAENHRKVKTYLNQVCEDTVTYPLNSNVQLAGLRLIRHLTITSEY 2249

Query: 238  QHMLANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTRELLRAQVPSSLGSLFNKKE 297
            QHM+ N IS+F RL + G+ ETK  VL +LLN ++NP+MT++LL A  P+SL ++F+KKE
Sbjct: 2250 QHMVTNYISEFLRLLTVGSGETKDHVLGMLLNFSKNPSMTKDLLIANAPTSLINIFSKKE 2309

Query: 298  NKEVILKLLVIFENINDNFKWEENEPTQNQFGEGSLFFFLKEFQVCADKVLGIESH-HDF 356
             KE IL  L +FENIN +FK      TQ++F + SL+F  +  + CA K+  + +  +D 
Sbjct: 2310 TKENILNALSLFENINYHFKRRAKAFTQDKFSKNSLYFLFQRPKACAKKLRALAAECNDP 2369

Query: 357  LVKVKVGKFMAKL 369
             VK +V   ++KL
Sbjct: 2370 EVKERVELLISKL 2382



 Score = 55.8 bits (133), Expect = 6e-08
 Identities = 25/43 (58%), Positives = 31/43 (72%)

Query: 1   MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGS 43
           MG  ++VGWVTAGLVI AG CY IY+ T+GR Q+   +A  GS
Sbjct: 93  MGRIQEVGWVTAGLVIWAGTCYYIYKFTKGRAQSVRTLARNGS 135


>gi|169165522 PREDICTED: similar to SVH protein isoform 1 [Homo
           sapiens]
          Length = 284

 Score =  214 bits (546), Expect = 8e-56
 Identities = 126/283 (44%), Positives = 175/283 (61%), Gaps = 27/283 (9%)

Query: 88  TRARARA-RARATRARRAVQKRASPNSDDTVLSPQELQKVLCLVEMSEKPYILEAALIAL 146
           TR R R  R    R+ ++ +     + DD VL+ ++LQK+L L+E +E P I+E ALI L
Sbjct: 28  TRGRRRGDRELGIRSSKSAEDLTDGSYDD-VLNAEQLQKLLYLLESTEDPVIIERALITL 86

Query: 147 GNNAAYAFNRDIIRDLGGLPIVAKILNTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQ 206
           GNNAA++ N+ IIR+LGG+PIVA  +N  +  +KEKAL  LNNLSVN ENQ ++K+Y++Q
Sbjct: 87  GNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYISQ 146

Query: 207 VCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQHMLANSISDFFRLFSAGNEETKLQVLKL 266
           VC+D  +  LNS+VQLAGLRLLTNMTVTN++QHML + I+D F++   GN  TK      
Sbjct: 147 VCEDVFSGPLNSAVQLAGLRLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTK------ 200

Query: 267 LLNLAENPAMTRELLRAQVPSSLGSLFNKKENKEVILKLLVIFENINDNFKWEENEPTQN 326
                             V SS  SL++    KE++L++L +F+NI +  K E +   Q 
Sbjct: 201 ------------------VDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQP 242

Query: 327 QFGEGSLFFFLKEFQVCADKVLGIESHHDFLVKVKVGKFMAKL 369
            F EGSLFF L   + CA K+  +  HHD  VK KV   + K+
Sbjct: 243 TFTEGSLFFLL-HGEECAQKIRALVDHHDAEVKEKVVTIIPKI 284



 Score = 61.6 bits (148), Expect = 1e-09
 Identities = 28/53 (52%), Positives = 35/53 (66%)

Query: 1  MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCS 53
          MG  R  GWV AGL++GAGACYCIYRLTRGR++   ++    S   +D  D S
Sbjct: 1  MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGS 53


>gi|238776797 SVH protein isoform e [Homo sapiens]
          Length = 284

 Score =  212 bits (540), Expect = 4e-55
 Identities = 125/283 (44%), Positives = 174/283 (61%), Gaps = 27/283 (9%)

Query: 88  TRARARA-RARATRARRAVQKRASPNSDDTVLSPQELQKVLCLVEMSEKPYILEAALIAL 146
           TR R R  R    R+ ++ +     + DD VL+ ++LQK+L L+E +E P I+E ALI L
Sbjct: 28  TRGRRRGDRELGIRSSKSAEDLTDGSYDD-VLNAEQLQKLLYLLESTEDPVIIERALITL 86

Query: 147 GNNAAYAFNRDIIRDLGGLPIVAKILNTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQ 206
           GNNAA++ N+ IIR+LGG+PIVA  +N  +  +KEKAL  LNNLSVN ENQ ++K+Y++Q
Sbjct: 87  GNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYISQ 146

Query: 207 VCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQHMLANSISDFFRLFSAGNEETKLQVLKL 266
           VC+D  +  LNS+VQLAGL LLTNMTVTN++QHML + I+D F++   GN  TK      
Sbjct: 147 VCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTK------ 200

Query: 267 LLNLAENPAMTRELLRAQVPSSLGSLFNKKENKEVILKLLVIFENINDNFKWEENEPTQN 326
                             V SS  SL++    KE++L++L +F+NI +  K E +   Q 
Sbjct: 201 ------------------VDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQP 242

Query: 327 QFGEGSLFFFLKEFQVCADKVLGIESHHDFLVKVKVGKFMAKL 369
            F EGSLFF L   + CA K+  +  HHD  VK KV   + K+
Sbjct: 243 TFTEGSLFFLL-HGEECAQKIRALVDHHDAEVKEKVVTIIPKI 284



 Score = 61.6 bits (148), Expect = 1e-09
 Identities = 28/53 (52%), Positives = 35/53 (66%)

Query: 1  MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCS 53
          MG  R  GWV AGL++GAGACYCIYRLTRGR++   ++    S   +D  D S
Sbjct: 1  MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGS 53


>gi|169165931 PREDICTED: similar to SVH protein isoform 1 [Homo
           sapiens]
          Length = 284

 Score =  211 bits (538), Expect = 7e-55
 Identities = 124/283 (43%), Positives = 175/283 (61%), Gaps = 27/283 (9%)

Query: 88  TRARARA-RARATRARRAVQKRASPNSDDTVLSPQELQKVLCLVEMSEKPYILEAALIAL 146
           TR R R  R    R+ ++ +     + DD VL+ ++LQK+L L+E +E P I+E ALI L
Sbjct: 28  TRGRRRGDRELGIRSSKSAEDLTDGSYDD-VLNAEQLQKLLYLLESTEDPVIIERALITL 86

Query: 147 GNNAAYAFNRDIIRDLGGLPIVAKILNTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQ 206
           GNNAA++ N+ IIR+LGG+PIVA  +N  +  +K+KAL  LNNLSVN ENQ ++K+Y++Q
Sbjct: 87  GNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKDKALNALNNLSVNVENQIKIKIYISQ 146

Query: 207 VCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQHMLANSISDFFRLFSAGNEETKLQVLKL 266
           VC+D  +  LNS+VQLAGLRLLTNMTVTN++QHML + I+D F++   GN  TK      
Sbjct: 147 VCEDVFSGPLNSAVQLAGLRLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTK------ 200

Query: 267 LLNLAENPAMTRELLRAQVPSSLGSLFNKKENKEVILKLLVIFENINDNFKWEENEPTQN 326
                             V SS  SL++    KE++L++L +F++I +  K E +   Q 
Sbjct: 201 ------------------VDSSFLSLYDSHVAKEILLRVLTLFQHIKNCLKIEGHLAVQP 242

Query: 327 QFGEGSLFFFLKEFQVCADKVLGIESHHDFLVKVKVGKFMAKL 369
            F EGSLFF L   + CA K+  +  HHD  VK KV   + K+
Sbjct: 243 TFTEGSLFFLL-HGEECAQKIRALVDHHDAEVKEKVVTIIPKI 284



 Score = 61.6 bits (148), Expect = 1e-09
 Identities = 28/53 (52%), Positives = 35/53 (66%)

Query: 1  MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCS 53
          MG  R  GWV AGL++GAGACYCIYRLTRGR++   ++    S   +D  D S
Sbjct: 1  MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGS 53


>gi|113414573 PREDICTED: similar to SVH protein isoform 2 [Homo
           sapiens]
          Length = 284

 Score =  211 bits (538), Expect = 7e-55
 Identities = 124/283 (43%), Positives = 175/283 (61%), Gaps = 27/283 (9%)

Query: 88  TRARARA-RARATRARRAVQKRASPNSDDTVLSPQELQKVLCLVEMSEKPYILEAALIAL 146
           TR R R  R    R+ ++ +     + DD VL+ ++LQK+L L+E +E P I+E ALI L
Sbjct: 28  TRGRRRGDRELGIRSSKSAEDLTDGSYDD-VLNAEQLQKLLYLLESTEDPVIIERALITL 86

Query: 147 GNNAAYAFNRDIIRDLGGLPIVAKILNTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQ 206
           GNNAA++ N+ IIR+LGG+PIVA  +N  +  +K+KAL  LNNLSVN ENQ ++K+Y++Q
Sbjct: 87  GNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKDKALNALNNLSVNVENQIKIKIYISQ 146

Query: 207 VCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQHMLANSISDFFRLFSAGNEETKLQVLKL 266
           VC+D  +  LNS+VQLAGLRLLTNMTVTN++QHML + I+D F++   GN  TK      
Sbjct: 147 VCEDVFSGPLNSAVQLAGLRLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTK------ 200

Query: 267 LLNLAENPAMTRELLRAQVPSSLGSLFNKKENKEVILKLLVIFENINDNFKWEENEPTQN 326
                             V SS  SL++    KE++L++L +F++I +  K E +   Q 
Sbjct: 201 ------------------VDSSFLSLYDSHVAKEILLRVLTLFQHIKNCLKIEGHLAVQP 242

Query: 327 QFGEGSLFFFLKEFQVCADKVLGIESHHDFLVKVKVGKFMAKL 369
            F EGSLFF L   + CA K+  +  HHD  VK KV   + K+
Sbjct: 243 TFTEGSLFFLL-HGEECAQKIRALVDHHDAEVKEKVVTIIPKI 284



 Score = 61.6 bits (148), Expect = 1e-09
 Identities = 28/53 (52%), Positives = 35/53 (66%)

Query: 1  MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCS 53
          MG  R  GWV AGL++GAGACYCIYRLTRGR++   ++    S   +D  D S
Sbjct: 1  MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGS 53


>gi|34147335 armadillo repeat containing, X-linked 6 [Homo sapiens]
          Length = 300

 Score =  176 bits (447), Expect = 2e-44
 Identities = 115/317 (36%), Positives = 172/317 (54%), Gaps = 34/317 (10%)

Query: 1   MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCSGARYNDW 60
           MG AR+VGW+ AGL+IGAGACYC+Y+LT GR  + EK+ E G                +W
Sbjct: 1   MGRAREVGWMAAGLMIGAGACYCVYKLTIGR-DDSEKLEEEGE--------------EEW 45

Query: 61  SDDDDDSNESKSIVWYP------------PWARIGTEAGTRARARARARATRARRAVQKR 108
            DDD + +E +  +W+              W   G   GT  R     +A RA   +++R
Sbjct: 46  -DDDQELDEEEPDIWFDFETMARPWTEDGDWTEPGAPGGTEDRPSGGGKANRA-HPIKQR 103

Query: 109 ASPNSDDTVLSPQELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDIIRDLGGLPIV 168
             P       S Q  +   C++++S+  +I    L A   +A + F++DI   L  L + 
Sbjct: 104 PFPYEHKNTWSAQNCKNGSCVLDLSKCLFIQGKLLFAEPKDAGFPFSQDINSHLASLSMA 163

Query: 169 AKILNTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSSVQLAGLRLL 228
                T DP V+E AL   +NL+ + E+Q ++K+Y+N+VC +T++   NS +Q AGL LL
Sbjct: 164 RNTSPTPDPTVRE-ALCAPDNLNASIESQGQIKMYINEVCRETVSRCCNSFLQQAGLNLL 222

Query: 229 TNMTVTNEYQHMLANSISDF-FRLFSAGNEETKLQVLKLLLNLAENPAMTRELLRAQVPS 287
            +MTV N   +MLA S SD  F L S G+   K+QVLK L+ L+E P +  EL+ AQ+  
Sbjct: 223 ISMTVIN---NMLAKSASDLKFPLISEGSGCAKVQVLKPLMGLSEKPVLAGELVGAQMLF 279

Query: 288 SLGSLFNKKENKEVILK 304
           S  SLF +  N+E++L+
Sbjct: 280 SFMSLFIRNGNREILLE 296


>gi|57546906 armadillo repeat containing, X-linked 6 [Homo sapiens]
          Length = 300

 Score =  176 bits (447), Expect = 2e-44
 Identities = 115/317 (36%), Positives = 172/317 (54%), Gaps = 34/317 (10%)

Query: 1   MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCSGARYNDW 60
           MG AR+VGW+ AGL+IGAGACYC+Y+LT GR  + EK+ E G                +W
Sbjct: 1   MGRAREVGWMAAGLMIGAGACYCVYKLTIGR-DDSEKLEEEGE--------------EEW 45

Query: 61  SDDDDDSNESKSIVWYP------------PWARIGTEAGTRARARARARATRARRAVQKR 108
            DDD + +E +  +W+              W   G   GT  R     +A RA   +++R
Sbjct: 46  -DDDQELDEEEPDIWFDFETMARPWTEDGDWTEPGAPGGTEDRPSGGGKANRA-HPIKQR 103

Query: 109 ASPNSDDTVLSPQELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDIIRDLGGLPIV 168
             P       S Q  +   C++++S+  +I    L A   +A + F++DI   L  L + 
Sbjct: 104 PFPYEHKNTWSAQNCKNGSCVLDLSKCLFIQGKLLFAEPKDAGFPFSQDINSHLASLSMA 163

Query: 169 AKILNTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSSVQLAGLRLL 228
                T DP V+E AL   +NL+ + E+Q ++K+Y+N+VC +T++   NS +Q AGL LL
Sbjct: 164 RNTSPTPDPTVRE-ALCAPDNLNASIESQGQIKMYINEVCRETVSRCCNSFLQQAGLNLL 222

Query: 229 TNMTVTNEYQHMLANSISDF-FRLFSAGNEETKLQVLKLLLNLAENPAMTRELLRAQVPS 287
            +MTV N   +MLA S SD  F L S G+   K+QVLK L+ L+E P +  EL+ AQ+  
Sbjct: 223 ISMTVIN---NMLAKSASDLKFPLISEGSGCAKVQVLKPLMGLSEKPVLAGELVGAQMLF 279

Query: 288 SLGSLFNKKENKEVILK 304
           S  SLF +  N+E++L+
Sbjct: 280 SFMSLFIRNGNREILLE 296


>gi|169165524 PREDICTED: similar to SVH protein isoform 2 [Homo
           sapiens]
          Length = 253

 Score =  156 bits (394), Expect = 3e-38
 Identities = 105/283 (37%), Positives = 148/283 (52%), Gaps = 58/283 (20%)

Query: 88  TRARARA-RARATRARRAVQKRASPNSDDTVLSPQELQKVLCLVEMSEKPYILEAALIAL 146
           TR R R  R    R+ ++ +     + DD VL+ ++LQK+L L+E +E P I+E ALI L
Sbjct: 28  TRGRRRGDRELGIRSSKSAEDLTDGSYDD-VLNAEQLQKLLYLLESTEDPVIIERALITL 86

Query: 147 GNNAAYAFNRDIIRDLGGLPIVAKILNTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQ 206
           GNNAA++ N+ IIR+LGG+PIVA  +N  +  +KEKAL  LNNLSVN ENQ ++K+Y++Q
Sbjct: 87  GNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYISQ 146

Query: 207 VCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQHMLANSISDFFRLFSAGNEETKLQVLKL 266
           VC+D  +  LNS+V L                                GN  TK      
Sbjct: 147 VCEDVFSGPLNSAVLL-------------------------------TGNGNTK------ 169

Query: 267 LLNLAENPAMTRELLRAQVPSSLGSLFNKKENKEVILKLLVIFENINDNFKWEENEPTQN 326
                             V SS  SL++    KE++L++L +F+NI +  K E +   Q 
Sbjct: 170 ------------------VDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQP 211

Query: 327 QFGEGSLFFFLKEFQVCADKVLGIESHHDFLVKVKVGKFMAKL 369
            F EGSLFF L   + CA K+  +  HHD  VK KV   + K+
Sbjct: 212 TFTEGSLFFLL-HGEECAQKIRALVDHHDAEVKEKVVTIIPKI 253



 Score = 61.6 bits (148), Expect = 1e-09
 Identities = 28/53 (52%), Positives = 35/53 (66%)

Query: 1  MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCS 53
          MG  R  GWV AGL++GAGACYCIYRLTRGR++   ++    S   +D  D S
Sbjct: 1  MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGS 53


>gi|238776799 SVH protein isoform d [Homo sapiens]
          Length = 249

 Score =  155 bits (392), Expect = 6e-38
 Identities = 108/283 (38%), Positives = 148/283 (52%), Gaps = 62/283 (21%)

Query: 88  TRARARA-RARATRARRAVQKRASPNSDDTVLSPQELQKVLCLVEMSEKPYILEAALIAL 146
           TR R R  R    R+ ++ +     + DD VL+ ++LQK+L L+E +E P I+E ALI L
Sbjct: 28  TRGRRRGDRELGIRSSKSAEDLTDGSYDD-VLNAEQLQKLLYLLESTEDPVIIERALITL 86

Query: 147 GNNAAYAFNRDIIRDLGGLPIVAKILNTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQ 206
           GNNAA++ N+ IIR+LGG+PIVA  +N  +  +KEKAL  LNNLSVN ENQ ++KV +  
Sbjct: 87  GNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKVQV-- 144

Query: 207 VCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQHMLANSISDFFRLFSAGNEETKLQVLKL 266
                             L+LL N                                    
Sbjct: 145 ------------------LKLLLN------------------------------------ 150

Query: 267 LLNLAENPAMTRELLRAQVPSSLGSLFNKKENKEVILKLLVIFENINDNFKWEENEPTQN 326
              L+ENPAMT  LLRAQV SS  SL++    KE++L++L +F+NI +  K E +   Q 
Sbjct: 151 ---LSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQP 207

Query: 327 QFGEGSLFFFLKEFQVCADKVLGIESHHDFLVKVKVGKFMAKL 369
            F EGSLFF L   + CA K+  +  HHD  VK KV   + K+
Sbjct: 208 TFTEGSLFFLL-HGEECAQKIRALVDHHDAEVKEKVVTIIPKI 249



 Score = 61.6 bits (148), Expect = 1e-09
 Identities = 28/53 (52%), Positives = 35/53 (66%)

Query: 1  MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCS 53
          MG  R  GWV AGL++GAGACYCIYRLTRGR++   ++    S   +D  D S
Sbjct: 1  MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGS 53


>gi|41054846 armadillo repeat containing, X-linked 5 [Homo sapiens]
          Length = 558

 Score =  153 bits (387), Expect = 2e-37
 Identities = 93/254 (36%), Positives = 155/254 (61%), Gaps = 4/254 (1%)

Query: 118 LSPQELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDIIRDLGGLPIVAKILNTRDP 177
           L P+E  K++ L+++++ P+I E A + +G + AY F +DII D+G   ++  ++N  +P
Sbjct: 307 LEPKEFDKLVALLKLTKDPFIHEIATMIMGISPAYPFTQDIIHDVGITVMIENLVN--NP 364

Query: 178 IVKEK--ALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSSVQLAGLRLLTNMTVTN 235
            VKE   AL ++++ S ++E  +  + Y++QVC   I+  LNS VQLAGL+LL ++++  
Sbjct: 365 NVKEHPGALSMVDDSSESSEEPKSGESYIHQVCKGIISCPLNSPVQLAGLKLLGHLSIKF 424

Query: 236 EYQHMLANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTRELLRAQVPSSLGSLFNK 295
           E  +++ + I DF  L + G+ +TK  VLK+   L++N A TREL+ A+V SSL + FNK
Sbjct: 425 EDHYVITSYIPDFLTLLNKGSVKTKFYVLKVFSCLSKNHANTRELISAKVLSSLVAPFNK 484

Query: 296 KENKEVILKLLVIFENINDNFKWEENEPTQNQFGEGSLFFFLKEFQVCADKVLGIESHHD 355
            E+K  IL ++ IFENIN  FK +    T+ +F +  L    +E +    K+  +  H D
Sbjct: 485 NESKANILNIIEIFENINFQFKTKAKLFTKEKFTKSELISIFQEAKQFGQKLQDLAEHSD 544

Query: 356 FLVKVKVGKFMAKL 369
             V+ KV + + KL
Sbjct: 545 PEVRDKVIRLILKL 558


>gi|113415138 PREDICTED: similar to SVH protein isoform 2 [Homo
           sapiens]
          Length = 253

 Score =  153 bits (386), Expect = 3e-37
 Identities = 103/283 (36%), Positives = 148/283 (52%), Gaps = 58/283 (20%)

Query: 88  TRARARA-RARATRARRAVQKRASPNSDDTVLSPQELQKVLCLVEMSEKPYILEAALIAL 146
           TR R R  R    R+ ++ +     + DD VL+ ++LQK+L L+E +E P I+E ALI L
Sbjct: 28  TRGRRRGDRELGIRSSKSAEDLTDGSYDD-VLNAEQLQKLLYLLESTEDPVIIERALITL 86

Query: 147 GNNAAYAFNRDIIRDLGGLPIVAKILNTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQ 206
           GNNAA++ N+ IIR+LGG+PIVA  +N  +  +K+KAL  LNNLSVN ENQ ++K+Y++Q
Sbjct: 87  GNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKDKALNALNNLSVNVENQIKIKIYISQ 146

Query: 207 VCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQHMLANSISDFFRLFSAGNEETKLQVLKL 266
           VC+D  +  LNS+V L                                GN  TK      
Sbjct: 147 VCEDVFSGPLNSAVLL-------------------------------TGNGNTK------ 169

Query: 267 LLNLAENPAMTRELLRAQVPSSLGSLFNKKENKEVILKLLVIFENINDNFKWEENEPTQN 326
                             V SS  SL++    KE++L++L +F++I +  K E +   Q 
Sbjct: 170 ------------------VDSSFLSLYDSHVAKEILLRVLTLFQHIKNCLKIEGHLAVQP 211

Query: 327 QFGEGSLFFFLKEFQVCADKVLGIESHHDFLVKVKVGKFMAKL 369
            F EGSLFF L   + CA K+  +  HHD  VK KV   + K+
Sbjct: 212 TFTEGSLFFLL-HGEECAQKIRALVDHHDAEVKEKVVTIIPKI 253



 Score = 61.6 bits (148), Expect = 1e-09
 Identities = 28/53 (52%), Positives = 35/53 (66%)

Query: 1  MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCS 53
          MG  R  GWV AGL++GAGACYCIYRLTRGR++   ++    S   +D  D S
Sbjct: 1  MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGS 53


>gi|169165133 PREDICTED: similar to SVH protein isoform 1 [Homo
           sapiens]
          Length = 253

 Score =  153 bits (386), Expect = 3e-37
 Identities = 103/283 (36%), Positives = 148/283 (52%), Gaps = 58/283 (20%)

Query: 88  TRARARA-RARATRARRAVQKRASPNSDDTVLSPQELQKVLCLVEMSEKPYILEAALIAL 146
           TR R R  R    R+ ++ +     + DD VL+ ++LQK+L L+E +E P I+E ALI L
Sbjct: 28  TRGRRRGDRELGIRSSKSAEDLTDGSYDD-VLNAEQLQKLLYLLESTEDPVIIERALITL 86

Query: 147 GNNAAYAFNRDIIRDLGGLPIVAKILNTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQ 206
           GNNAA++ N+ IIR+LGG+PIVA  +N  +  +K+KAL  LNNLSVN ENQ ++K+Y++Q
Sbjct: 87  GNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKDKALNALNNLSVNVENQIKIKIYISQ 146

Query: 207 VCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQHMLANSISDFFRLFSAGNEETKLQVLKL 266
           VC+D  +  LNS+V L                                GN  TK      
Sbjct: 147 VCEDVFSGPLNSAVLL-------------------------------TGNGNTK------ 169

Query: 267 LLNLAENPAMTRELLRAQVPSSLGSLFNKKENKEVILKLLVIFENINDNFKWEENEPTQN 326
                             V SS  SL++    KE++L++L +F++I +  K E +   Q 
Sbjct: 170 ------------------VDSSFLSLYDSHVAKEILLRVLTLFQHIKNCLKIEGHLAVQP 211

Query: 327 QFGEGSLFFFLKEFQVCADKVLGIESHHDFLVKVKVGKFMAKL 369
            F EGSLFF L   + CA K+  +  HHD  VK KV   + K+
Sbjct: 212 TFTEGSLFFLL-HGEECAQKIRALVDHHDAEVKEKVVTIIPKI 253



 Score = 61.6 bits (148), Expect = 1e-09
 Identities = 28/53 (52%), Positives = 35/53 (66%)

Query: 1  MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCS 53
          MG  R  GWV AGL++GAGACYCIYRLTRGR++   ++    S   +D  D S
Sbjct: 1  MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGS 53


>gi|238776795 SVH protein isoform c [Homo sapiens]
          Length = 284

 Score =  144 bits (363), Expect = 1e-34
 Identities = 116/371 (31%), Positives = 167/371 (45%), Gaps = 89/371 (23%)

Query: 1   MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCSGARYNDW 60
           MG  R  GWV AGL++GAGACYCIYRLTRGR++   ++    S         +GA     
Sbjct: 1   MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKS-------AGALEEGT 53

Query: 61  SDDDDDSNESKSIVWYPPWARIGTEAGTRARARARA--RATRARRAVQKRASPNSDDTVL 118
           S+                    G   G  AR +      +  ++ +  +  +  S D VL
Sbjct: 54  SE--------------------GQLCGRSARPQTGGTWESQWSKTSQPEDLTDGSYDDVL 93

Query: 119 SPQELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDIIRDLGGLPIVAKILNTRDPI 178
           + ++LQK+L L+E                                         +T DP+
Sbjct: 94  NAEQLQKLLYLLE-----------------------------------------STEDPV 112

Query: 179 VKEKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQ 238
           + E+ALI L N +  + NQ  ++            +  N S++   L  L N++V  E Q
Sbjct: 113 IIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQ 172

Query: 239 HMLANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTRELLRAQVPSSLGSLFNKKEN 298
             +                  K+QVLKLLLNL+ENPAMT  LLRAQV SS  SL++    
Sbjct: 173 IKI------------------KVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVA 214

Query: 299 KEVILKLLVIFENINDNFKWEENEPTQNQFGEGSLFFFLKEFQVCADKVLGIESHHDFLV 358
           KE++L++L +F+NI +  K E +   Q  F EGSLFF L   + CA K+  +  HHD  V
Sbjct: 215 KEILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLL-HGEECAQKIRALVDHHDAEV 273

Query: 359 KVKVGKFMAKL 369
           K KV   + K+
Sbjct: 274 KEKVVTIIPKI 284


>gi|150378528 G protein-coupled receptor associated sorting protein 1
            [Homo sapiens]
          Length = 1395

 Score =  137 bits (345), Expect = 2e-32
 Identities = 73/202 (36%), Positives = 122/202 (60%)

Query: 118  LSPQELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDIIRDLGGLPIVAKILNTRDP 177
            +  +E +++L L+E    P+I E + IA+G  +A  F RD IRD G + ++  +LN    
Sbjct: 1151 IGSEEFEELLLLMEKIRDPFIHEISKIAMGMRSASQFTRDFIRDSGVVSLIETLLNYPSS 1210

Query: 178  IVKEKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSSVQLAGLRLLTNMTVTNEY 237
             V+   L  +  ++    N   ++ Y+ +VC++T+   ++S  QL+G+R++ ++T T +Y
Sbjct: 1211 RVRTSFLENMIRMAPPYPNLNIIQTYICKVCEETLAYSVDSPEQLSGIRMIRHLTTTTDY 1270

Query: 238  QHMLANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTRELLRAQVPSSLGSLFNKKE 297
              ++AN +S F  L + GN +T+  VLK+LLNL+EN  MT+ELL A+  S    LFN++E
Sbjct: 1271 HTLVANYMSGFLSLLATGNAKTRFHVLKMLLNLSENLFMTKELLSAEAVSEFIGLFNREE 1330

Query: 298  NKEVILKLLVIFENINDNFKWE 319
              + I  +L IFENI +N K E
Sbjct: 1331 TNDNIQIVLAIFENIGNNIKKE 1352


>gi|150378489 G protein-coupled receptor associated sorting protein 1
            [Homo sapiens]
          Length = 1395

 Score =  137 bits (345), Expect = 2e-32
 Identities = 73/202 (36%), Positives = 122/202 (60%)

Query: 118  LSPQELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDIIRDLGGLPIVAKILNTRDP 177
            +  +E +++L L+E    P+I E + IA+G  +A  F RD IRD G + ++  +LN    
Sbjct: 1151 IGSEEFEELLLLMEKIRDPFIHEISKIAMGMRSASQFTRDFIRDSGVVSLIETLLNYPSS 1210

Query: 178  IVKEKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSSVQLAGLRLLTNMTVTNEY 237
             V+   L  +  ++    N   ++ Y+ +VC++T+   ++S  QL+G+R++ ++T T +Y
Sbjct: 1211 RVRTSFLENMIRMAPPYPNLNIIQTYICKVCEETLAYSVDSPEQLSGIRMIRHLTTTTDY 1270

Query: 238  QHMLANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTRELLRAQVPSSLGSLFNKKE 297
              ++AN +S F  L + GN +T+  VLK+LLNL+EN  MT+ELL A+  S    LFN++E
Sbjct: 1271 HTLVANYMSGFLSLLATGNAKTRFHVLKMLLNLSENLFMTKELLSAEAVSEFIGLFNREE 1330

Query: 298  NKEVILKLLVIFENINDNFKWE 319
              + I  +L IFENI +N K E
Sbjct: 1331 TNDNIQIVLAIFENIGNNIKKE 1352


>gi|103472136 G protein-coupled receptor associated sorting protein 1
            [Homo sapiens]
          Length = 1395

 Score =  137 bits (345), Expect = 2e-32
 Identities = 73/202 (36%), Positives = 122/202 (60%)

Query: 118  LSPQELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDIIRDLGGLPIVAKILNTRDP 177
            +  +E +++L L+E    P+I E + IA+G  +A  F RD IRD G + ++  +LN    
Sbjct: 1151 IGSEEFEELLLLMEKIRDPFIHEISKIAMGMRSASQFTRDFIRDSGVVSLIETLLNYPSS 1210

Query: 178  IVKEKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSSVQLAGLRLLTNMTVTNEY 237
             V+   L  +  ++    N   ++ Y+ +VC++T+   ++S  QL+G+R++ ++T T +Y
Sbjct: 1211 RVRTSFLENMIRMAPPYPNLNIIQTYICKVCEETLAYSVDSPEQLSGIRMIRHLTTTTDY 1270

Query: 238  QHMLANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTRELLRAQVPSSLGSLFNKKE 297
              ++AN +S F  L + GN +T+  VLK+LLNL+EN  MT+ELL A+  S    LFN++E
Sbjct: 1271 HTLVANYMSGFLSLLATGNAKTRFHVLKMLLNLSENLFMTKELLSAEAVSEFIGLFNREE 1330

Query: 298  NKEVILKLLVIFENINDNFKWE 319
              + I  +L IFENI +N K E
Sbjct: 1331 TNDNIQIVLAIFENIGNNIKKE 1352


>gi|51702248 G protein-coupled receptor associated sorting protein 2
           [Homo sapiens]
          Length = 838

 Score =  127 bits (318), Expect = 2e-29
 Identities = 71/230 (30%), Positives = 129/230 (56%)

Query: 118 LSPQELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDIIRDLGGLPIVAKILNTRDP 177
           +  +E ++ L L++    P+I E + IA+G  +A  F RD IRD G + ++  +LN    
Sbjct: 593 IGSEEFEEFLLLMDKIRDPFIHEISKIAMGMRSASQFTRDFIRDSGVVSLIETLLNYPSS 652

Query: 178 IVKEKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSSVQLAGLRLLTNMTVTNEY 237
            V+   L  + +++    N   ++ ++ QVC++T+   ++S  QL G+R+L ++T+T +Y
Sbjct: 653 RVRTSFLENMIHMAPPYPNLNMIETFICQVCEETLAHSVDSLEQLTGIRMLRHLTMTIDY 712

Query: 238 QHMLANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTRELLRAQVPSSLGSLFNKKE 297
             ++AN +S F  L +  N  TK  VLK+LLNL+ENPA+ ++L  A+  S    LFN +E
Sbjct: 713 HTLIANYMSGFLSLLTTANARTKFHVLKMLLNLSENPAVAKKLFSAKALSIFVGLFNIEE 772

Query: 298 NKEVILKLLVIFENINDNFKWEENEPTQNQFGEGSLFFFLKEFQVCADKV 347
             + I  ++ +F+NI++  K  +     + F    L    +EF+  A ++
Sbjct: 773 TNDNIQIVIKMFQNISNIIKSGKMSLIDDDFSLEPLISAFREFEELAKQL 822


>gi|19923967 G protein-coupled receptor associated sorting protein 2
           [Homo sapiens]
          Length = 838

 Score =  127 bits (318), Expect = 2e-29
 Identities = 71/230 (30%), Positives = 129/230 (56%)

Query: 118 LSPQELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDIIRDLGGLPIVAKILNTRDP 177
           +  +E ++ L L++    P+I E + IA+G  +A  F RD IRD G + ++  +LN    
Sbjct: 593 IGSEEFEEFLLLMDKIRDPFIHEISKIAMGMRSASQFTRDFIRDSGVVSLIETLLNYPSS 652

Query: 178 IVKEKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSSVQLAGLRLLTNMTVTNEY 237
            V+   L  + +++    N   ++ ++ QVC++T+   ++S  QL G+R+L ++T+T +Y
Sbjct: 653 RVRTSFLENMIHMAPPYPNLNMIETFICQVCEETLAHSVDSLEQLTGIRMLRHLTMTIDY 712

Query: 238 QHMLANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTRELLRAQVPSSLGSLFNKKE 297
             ++AN +S F  L +  N  TK  VLK+LLNL+ENPA+ ++L  A+  S    LFN +E
Sbjct: 713 HTLIANYMSGFLSLLTTANARTKFHVLKMLLNLSENPAVAKKLFSAKALSIFVGLFNIEE 772

Query: 298 NKEVILKLLVIFENINDNFKWEENEPTQNQFGEGSLFFFLKEFQVCADKV 347
             + I  ++ +F+NI++  K  +     + F    L    +EF+  A ++
Sbjct: 773 TNDNIQIVIKMFQNISNIIKSGKMSLIDDDFSLEPLISAFREFEELAKQL 822


>gi|216547715 basic helix-loop-helix domain containing, class B, 9
           [Homo sapiens]
          Length = 547

 Score =  122 bits (306), Expect = 5e-28
 Identities = 65/218 (29%), Positives = 132/218 (60%), Gaps = 1/218 (0%)

Query: 100 RARRAVQKRASPNSDDTVLSPQELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDII 159
           R    ++  A P   +  +  +E +K++ L++ +  P I + A IA+G +  + F ++ I
Sbjct: 302 REVNGIKPFACPCKMECYMDSEEFEKLVSLLKSTTDPLIHKIARIAMGVHNVHPFAQEFI 361

Query: 160 RDLGGLPIVAKILNTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSS 219
            ++G + ++  +L+   P +++K +I LN  S + E QR++++++  +C +T++  LNS 
Sbjct: 362 NEVGVVTLIESLLSFPSPEMRKKTVITLNPPSGD-ERQRKIELHVKHMCKETMSFPLNSP 420

Query: 220 VQLAGLRLLTNMTVTNEYQHMLANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTRE 279
            Q +GL++L  +T    + +++AN  S+ F L S+GN +T+  VLKLLLN++ENP   R+
Sbjct: 421 GQQSGLKILGQLTTDFVHHYIVANYFSELFHLLSSGNCKTRNLVLKLLLNMSENPTAARD 480

Query: 280 LLRAQVPSSLGSLFNKKENKEVILKLLVIFENINDNFK 317
           ++  +  ++L  +FN+KE K  ++  + IF NI ++ +
Sbjct: 481 MINMKALAALKLIFNQKEAKANLVSGVAIFINIKEHIR 518


>gi|216547682 basic helix-loop-helix domain containing, class B, 9
           [Homo sapiens]
          Length = 547

 Score =  122 bits (306), Expect = 5e-28
 Identities = 65/218 (29%), Positives = 132/218 (60%), Gaps = 1/218 (0%)

Query: 100 RARRAVQKRASPNSDDTVLSPQELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDII 159
           R    ++  A P   +  +  +E +K++ L++ +  P I + A IA+G +  + F ++ I
Sbjct: 302 REVNGIKPFACPCKMECYMDSEEFEKLVSLLKSTTDPLIHKIARIAMGVHNVHPFAQEFI 361

Query: 160 RDLGGLPIVAKILNTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSS 219
            ++G + ++  +L+   P +++K +I LN  S + E QR++++++  +C +T++  LNS 
Sbjct: 362 NEVGVVTLIESLLSFPSPEMRKKTVITLNPPSGD-ERQRKIELHVKHMCKETMSFPLNSP 420

Query: 220 VQLAGLRLLTNMTVTNEYQHMLANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTRE 279
            Q +GL++L  +T    + +++AN  S+ F L S+GN +T+  VLKLLLN++ENP   R+
Sbjct: 421 GQQSGLKILGQLTTDFVHHYIVANYFSELFHLLSSGNCKTRNLVLKLLLNMSENPTAARD 480

Query: 280 LLRAQVPSSLGSLFNKKENKEVILKLLVIFENINDNFK 317
           ++  +  ++L  +FN+KE K  ++  + IF NI ++ +
Sbjct: 481 MINMKALAALKLIFNQKEAKANLVSGVAIFINIKEHIR 518


>gi|216547672 basic helix-loop-helix domain containing, class B, 9
           [Homo sapiens]
          Length = 547

 Score =  122 bits (306), Expect = 5e-28
 Identities = 65/218 (29%), Positives = 132/218 (60%), Gaps = 1/218 (0%)

Query: 100 RARRAVQKRASPNSDDTVLSPQELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDII 159
           R    ++  A P   +  +  +E +K++ L++ +  P I + A IA+G +  + F ++ I
Sbjct: 302 REVNGIKPFACPCKMECYMDSEEFEKLVSLLKSTTDPLIHKIARIAMGVHNVHPFAQEFI 361

Query: 160 RDLGGLPIVAKILNTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSS 219
            ++G + ++  +L+   P +++K +I LN  S + E QR++++++  +C +T++  LNS 
Sbjct: 362 NEVGVVTLIESLLSFPSPEMRKKTVITLNPPSGD-ERQRKIELHVKHMCKETMSFPLNSP 420

Query: 220 VQLAGLRLLTNMTVTNEYQHMLANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTRE 279
            Q +GL++L  +T    + +++AN  S+ F L S+GN +T+  VLKLLLN++ENP   R+
Sbjct: 421 GQQSGLKILGQLTTDFVHHYIVANYFSELFHLLSSGNCKTRNLVLKLLLNMSENPTAARD 480

Query: 280 LLRAQVPSSLGSLFNKKENKEVILKLLVIFENINDNFK 317
           ++  +  ++L  +FN+KE K  ++  + IF NI ++ +
Sbjct: 481 MINMKALAALKLIFNQKEAKANLVSGVAIFINIKEHIR 518


>gi|216547663 basic helix-loop-helix domain containing, class B, 9
           [Homo sapiens]
          Length = 547

 Score =  122 bits (306), Expect = 5e-28
 Identities = 65/218 (29%), Positives = 132/218 (60%), Gaps = 1/218 (0%)

Query: 100 RARRAVQKRASPNSDDTVLSPQELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDII 159
           R    ++  A P   +  +  +E +K++ L++ +  P I + A IA+G +  + F ++ I
Sbjct: 302 REVNGIKPFACPCKMECYMDSEEFEKLVSLLKSTTDPLIHKIARIAMGVHNVHPFAQEFI 361

Query: 160 RDLGGLPIVAKILNTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSS 219
            ++G + ++  +L+   P +++K +I LN  S + E QR++++++  +C +T++  LNS 
Sbjct: 362 NEVGVVTLIESLLSFPSPEMRKKTVITLNPPSGD-ERQRKIELHVKHMCKETMSFPLNSP 420

Query: 220 VQLAGLRLLTNMTVTNEYQHMLANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTRE 279
            Q +GL++L  +T    + +++AN  S+ F L S+GN +T+  VLKLLLN++ENP   R+
Sbjct: 421 GQQSGLKILGQLTTDFVHHYIVANYFSELFHLLSSGNCKTRNLVLKLLLNMSENPTAARD 480

Query: 280 LLRAQVPSSLGSLFNKKENKEVILKLLVIFENINDNFK 317
           ++  +  ++L  +FN+KE K  ++  + IF NI ++ +
Sbjct: 481 MINMKALAALKLIFNQKEAKANLVSGVAIFINIKEHIR 518


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.133    0.386 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,921,676
Number of Sequences: 37866
Number of extensions: 531045
Number of successful extensions: 2082
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 1927
Number of HSP's gapped (non-prelim): 136
length of query: 379
length of database: 18,247,518
effective HSP length: 104
effective length of query: 275
effective length of database: 14,309,454
effective search space: 3935099850
effective search space used: 3935099850
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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