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Search of human proteins with 29540562
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|29540562 ALEX2 protein [Homo sapiens]
(632 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|7662162 ALEX2 protein [Homo sapiens] 1233 0.0
gi|29540562 ALEX2 protein [Homo sapiens] 1233 0.0
gi|7706143 armadillo repeat containing, X-linked 1 [Homo sapiens] 287 2e-77
gi|29540566 armadillo repeat containing, X-linked 3 [Homo sapiens] 265 1e-70
gi|29540564 armadillo repeat containing, X-linked 3 [Homo sapiens] 265 1e-70
gi|7705274 armadillo repeat containing, X-linked 3 [Homo sapiens] 265 1e-70
gi|238776793 SVH protein isoform b [Homo sapiens] 236 5e-62
gi|31377663 SVH protein isoform a [Homo sapiens] 235 1e-61
gi|239757861 PREDICTED: similar to armadillo repeat containing, ... 204 3e-52
gi|169165522 PREDICTED: similar to SVH protein isoform 1 [Homo s... 202 1e-51
gi|238776797 SVH protein isoform e [Homo sapiens] 201 2e-51
gi|169165931 PREDICTED: similar to SVH protein isoform 1 [Homo s... 201 2e-51
gi|113414573 PREDICTED: similar to SVH protein isoform 2 [Homo s... 201 2e-51
gi|169165524 PREDICTED: similar to SVH protein isoform 2 [Homo s... 150 4e-36
gi|113415138 PREDICTED: similar to SVH protein isoform 2 [Homo s... 149 1e-35
gi|169165133 PREDICTED: similar to SVH protein isoform 1 [Homo s... 149 1e-35
gi|41054846 armadillo repeat containing, X-linked 5 [Homo sapiens] 114 2e-25
gi|238776799 SVH protein isoform d [Homo sapiens] 112 1e-24
gi|150378528 G protein-coupled receptor associated sorting prote... 111 2e-24
gi|150378489 G protein-coupled receptor associated sorting prote... 111 2e-24
gi|103472136 G protein-coupled receptor associated sorting prote... 111 2e-24
gi|238776795 SVH protein isoform c [Homo sapiens] 110 3e-24
gi|34147335 armadillo repeat containing, X-linked 6 [Homo sapiens] 106 7e-23
gi|57546906 armadillo repeat containing, X-linked 6 [Homo sapiens] 106 7e-23
gi|51702248 G protein-coupled receptor associated sorting protei... 97 3e-20
gi|19923967 G protein-coupled receptor associated sorting protei... 97 3e-20
gi|238776801 SVH protein isoform f [Homo sapiens] 97 5e-20
gi|216547715 basic helix-loop-helix domain containing, class B, ... 95 2e-19
gi|216547682 basic helix-loop-helix domain containing, class B, ... 95 2e-19
gi|216547672 basic helix-loop-helix domain containing, class B, ... 95 2e-19
>gi|7662162 ALEX2 protein [Homo sapiens]
Length = 632
Score = 1233 bits (3190), Expect = 0.0
Identities = 632/632 (100%), Positives = 632/632 (100%)
Query: 1 MSRVRDAGCVAAGIVIGAGAWYCVYKYTRGRDQTKKRMAKPKNRAVAGTGARARAGLRAG 60
MSRVRDAGCVAAGIVIGAGAWYCVYKYTRGRDQTKKRMAKPKNRAVAGTGARARAGLRAG
Sbjct: 1 MSRVRDAGCVAAGIVIGAGAWYCVYKYTRGRDQTKKRMAKPKNRAVAGTGARARAGLRAG 60
Query: 61 FTIDLGSGFSPPTPVRAEAEDRAQDEASALDTVGAEAVAPAASSAEAQSGAGSQAQEADG 120
FTIDLGSGFSPPTPVRAEAEDRAQDEASALDTVGAEAVAPAASSAEAQSGAGSQAQEADG
Sbjct: 61 FTIDLGSGFSPPTPVRAEAEDRAQDEASALDTVGAEAVAPAASSAEAQSGAGSQAQEADG 120
Query: 121 AGVGPKAESVVGAAMASAIAPPPGVTEALGAAEAPAMAGAPKVAEAPREAETSRAAVPPG 180
AGVGPKAESVVGAAMASAIAPPPGVTEALGAAEAPAMAGAPKVAEAPREAETSRAAVPPG
Sbjct: 121 AGVGPKAESVVGAAMASAIAPPPGVTEALGAAEAPAMAGAPKVAEAPREAETSRAAVPPG 180
Query: 181 TVVPTEAAAPTEVTEGPGVAAPTKVAEAPGVASPTEAAEAPVPATPTGAAAPTGAAESPG 240
TVVPTEAAAPTEVTEGPGVAAPTKVAEAPGVASPTEAAEAPVPATPTGAAAPTGAAESPG
Sbjct: 181 TVVPTEAAAPTEVTEGPGVAAPTKVAEAPGVASPTEAAEAPVPATPTGAAAPTGAAESPG 240
Query: 241 TSGSPRTAVVPGTSAAKKATPGAHTGAIPKATSATGAVPKGGGKGVTRSRNGGKGKGKKS 300
TSGSPRTAVVPGTSAAKKATPGAHTGAIPKATSATGAVPKGGGKGVTRSRNGGKGKGKKS
Sbjct: 241 TSGSPRTAVVPGTSAAKKATPGAHTGAIPKATSATGAVPKGGGKGVTRSRNGGKGKGKKS 300
Query: 301 KVEVDELGMGFRPGDGAAAAAAASANGGQAFLAEVPDSEEGESGWTDTESDSDSEPETQR 360
KVEVDELGMGFRPGDGAAAAAAASANGGQAFLAEVPDSEEGESGWTDTESDSDSEPETQR
Sbjct: 301 KVEVDELGMGFRPGDGAAAAAAASANGGQAFLAEVPDSEEGESGWTDTESDSDSEPETQR 360
Query: 361 RGRGRRPVAMQKRPFPYEIDEILGVRDLRKVLALLQKSDDPFIQQVALLTLSNNANYSCN 420
RGRGRRPVAMQKRPFPYEIDEILGVRDLRKVLALLQKSDDPFIQQVALLTLSNNANYSCN
Sbjct: 361 RGRGRRPVAMQKRPFPYEIDEILGVRDLRKVLALLQKSDDPFIQQVALLTLSNNANYSCN 420
Query: 421 QETIRKLGGLPIIANMINKTDPHIKEKALMAMNNLSENYENQGRLQVYMNKVMDDIMASN 480
QETIRKLGGLPIIANMINKTDPHIKEKALMAMNNLSENYENQGRLQVYMNKVMDDIMASN
Sbjct: 421 QETIRKLGGLPIIANMINKTDPHIKEKALMAMNNLSENYENQGRLQVYMNKVMDDIMASN 480
Query: 481 LNSAVQVVGLKFLTNMTITNDYQHLLVNSIANFFRLLSQGGGKIKVEILKILSNFAENPD 540
LNSAVQVVGLKFLTNMTITNDYQHLLVNSIANFFRLLSQGGGKIKVEILKILSNFAENPD
Sbjct: 481 LNSAVQVVGLKFLTNMTITNDYQHLLVNSIANFFRLLSQGGGKIKVEILKILSNFAENPD 540
Query: 541 MLKKLLSTQVPASFSSLYNSYVESEILINALTLFEIIYDNLRAEVFNYREFNKGSLFYLC 600
MLKKLLSTQVPASFSSLYNSYVESEILINALTLFEIIYDNLRAEVFNYREFNKGSLFYLC
Sbjct: 541 MLKKLLSTQVPASFSSLYNSYVESEILINALTLFEIIYDNLRAEVFNYREFNKGSLFYLC 600
Query: 601 TTSGVCVKKIRALANHHDLLVKVKVIKLVNKF 632
TTSGVCVKKIRALANHHDLLVKVKVIKLVNKF
Sbjct: 601 TTSGVCVKKIRALANHHDLLVKVKVIKLVNKF 632
>gi|29540562 ALEX2 protein [Homo sapiens]
Length = 632
Score = 1233 bits (3190), Expect = 0.0
Identities = 632/632 (100%), Positives = 632/632 (100%)
Query: 1 MSRVRDAGCVAAGIVIGAGAWYCVYKYTRGRDQTKKRMAKPKNRAVAGTGARARAGLRAG 60
MSRVRDAGCVAAGIVIGAGAWYCVYKYTRGRDQTKKRMAKPKNRAVAGTGARARAGLRAG
Sbjct: 1 MSRVRDAGCVAAGIVIGAGAWYCVYKYTRGRDQTKKRMAKPKNRAVAGTGARARAGLRAG 60
Query: 61 FTIDLGSGFSPPTPVRAEAEDRAQDEASALDTVGAEAVAPAASSAEAQSGAGSQAQEADG 120
FTIDLGSGFSPPTPVRAEAEDRAQDEASALDTVGAEAVAPAASSAEAQSGAGSQAQEADG
Sbjct: 61 FTIDLGSGFSPPTPVRAEAEDRAQDEASALDTVGAEAVAPAASSAEAQSGAGSQAQEADG 120
Query: 121 AGVGPKAESVVGAAMASAIAPPPGVTEALGAAEAPAMAGAPKVAEAPREAETSRAAVPPG 180
AGVGPKAESVVGAAMASAIAPPPGVTEALGAAEAPAMAGAPKVAEAPREAETSRAAVPPG
Sbjct: 121 AGVGPKAESVVGAAMASAIAPPPGVTEALGAAEAPAMAGAPKVAEAPREAETSRAAVPPG 180
Query: 181 TVVPTEAAAPTEVTEGPGVAAPTKVAEAPGVASPTEAAEAPVPATPTGAAAPTGAAESPG 240
TVVPTEAAAPTEVTEGPGVAAPTKVAEAPGVASPTEAAEAPVPATPTGAAAPTGAAESPG
Sbjct: 181 TVVPTEAAAPTEVTEGPGVAAPTKVAEAPGVASPTEAAEAPVPATPTGAAAPTGAAESPG 240
Query: 241 TSGSPRTAVVPGTSAAKKATPGAHTGAIPKATSATGAVPKGGGKGVTRSRNGGKGKGKKS 300
TSGSPRTAVVPGTSAAKKATPGAHTGAIPKATSATGAVPKGGGKGVTRSRNGGKGKGKKS
Sbjct: 241 TSGSPRTAVVPGTSAAKKATPGAHTGAIPKATSATGAVPKGGGKGVTRSRNGGKGKGKKS 300
Query: 301 KVEVDELGMGFRPGDGAAAAAAASANGGQAFLAEVPDSEEGESGWTDTESDSDSEPETQR 360
KVEVDELGMGFRPGDGAAAAAAASANGGQAFLAEVPDSEEGESGWTDTESDSDSEPETQR
Sbjct: 301 KVEVDELGMGFRPGDGAAAAAAASANGGQAFLAEVPDSEEGESGWTDTESDSDSEPETQR 360
Query: 361 RGRGRRPVAMQKRPFPYEIDEILGVRDLRKVLALLQKSDDPFIQQVALLTLSNNANYSCN 420
RGRGRRPVAMQKRPFPYEIDEILGVRDLRKVLALLQKSDDPFIQQVALLTLSNNANYSCN
Sbjct: 361 RGRGRRPVAMQKRPFPYEIDEILGVRDLRKVLALLQKSDDPFIQQVALLTLSNNANYSCN 420
Query: 421 QETIRKLGGLPIIANMINKTDPHIKEKALMAMNNLSENYENQGRLQVYMNKVMDDIMASN 480
QETIRKLGGLPIIANMINKTDPHIKEKALMAMNNLSENYENQGRLQVYMNKVMDDIMASN
Sbjct: 421 QETIRKLGGLPIIANMINKTDPHIKEKALMAMNNLSENYENQGRLQVYMNKVMDDIMASN 480
Query: 481 LNSAVQVVGLKFLTNMTITNDYQHLLVNSIANFFRLLSQGGGKIKVEILKILSNFAENPD 540
LNSAVQVVGLKFLTNMTITNDYQHLLVNSIANFFRLLSQGGGKIKVEILKILSNFAENPD
Sbjct: 481 LNSAVQVVGLKFLTNMTITNDYQHLLVNSIANFFRLLSQGGGKIKVEILKILSNFAENPD 540
Query: 541 MLKKLLSTQVPASFSSLYNSYVESEILINALTLFEIIYDNLRAEVFNYREFNKGSLFYLC 600
MLKKLLSTQVPASFSSLYNSYVESEILINALTLFEIIYDNLRAEVFNYREFNKGSLFYLC
Sbjct: 541 MLKKLLSTQVPASFSSLYNSYVESEILINALTLFEIIYDNLRAEVFNYREFNKGSLFYLC 600
Query: 601 TTSGVCVKKIRALANHHDLLVKVKVIKLVNKF 632
TTSGVCVKKIRALANHHDLLVKVKVIKLVNKF
Sbjct: 601 TTSGVCVKKIRALANHHDLLVKVKVIKLVNKF 632
>gi|7706143 armadillo repeat containing, X-linked 1 [Homo sapiens]
Length = 453
Score = 287 bits (735), Expect = 2e-77
Identities = 173/418 (41%), Positives = 239/418 (57%), Gaps = 10/418 (2%)
Query: 216 EAAEAPVPATPTGAAAPTGAAESPGTSGSPRTAVVPGTSAAKKATPGAHTGAIPKATSAT 275
E+ + T A T A G + V P S + PG A + S
Sbjct: 43 ESTDTSEIGVETVKGAKTNAGAGSGAKLQGDSEVKPEVSLGLEDCPGVKEKAHSGSHSGG 102
Query: 276 GAVPKGGGKGVTRSRNGGKGKGKKSKVEVDELGMGFRPGDGAAAAAAASANGGQAFLAEV 335
G K T GK ++V G G+ A + GG+
Sbjct: 103 GLEAKAKALFNTLKEQASAKAGKGARV-------GTISGN-RTLAPSLPCPGGRGGGCHP 154
Query: 336 PDSEEGESGWTDTESDSDSEPETQRRGRGRRPVAMQKRPFPYEIDEILGVRDLRKVLALL 395
S G +S + ++ R PV K FPY+ID+IL DL+KVL +L
Sbjct: 155 TRSGSRAGGRASGKSKGKARSKSTRAPATTWPVRRGKFNFPYKIDDILSAPDLQKVLNIL 214
Query: 396 QKSDDPFIQQVALLTLSNNANYSCNQETIRKLGGLPIIANMINKTDPHIKEKALMAMNNL 455
++++DPFIQ+VAL+TL NNA YS NQ IR+LGG+PIIA +I DP I+EK A+NNL
Sbjct: 215 ERTNDPFIQEVALVTLGNNAAYSFNQNAIRELGGVPIIAKLIKTKDPIIREKTYNALNNL 274
Query: 456 SENYENQGRLQVYMNKVMDDIMASNLNSAVQVVGLKFLTNMTITNDYQHLLVNSIANFFR 515
S N ENQG+++ Y+++V DD M L+SAVQ+ GL+ LTNMT+TN YQHLL S +FF
Sbjct: 275 SVNAENQGKIKTYISQVCDDTMVCRLDSAVQMAGLRLLTNMTVTNHYQHLLSYSFPDFFA 334
Query: 516 LLSQGGGKIKVEILKILSNFAENPDMLKKLLSTQVPASFSSLYNSYVESEILINALTLFE 575
LL G K++I+K++ NF ENP M ++L+S +VP+ SL+N + EIL+N LTLFE
Sbjct: 335 LLFLGNHFTKIQIMKLIINFTENPAMTRELVSCKVPSELISLFNKEWDREILLNILTLFE 394
Query: 576 IIYDNLRAE--VFNYREFNKGSLFYLCTTSGVCVKKIRALANHHDLLVKVKVIKLVNK 631
I DN++ E + +EF++ SLF+L SGVCVKKI+ALANH+DL+VKVKV+K++ K
Sbjct: 395 NINDNIKNEGLASSRKEFSRSSLFFLFKESGVCVKKIKALANHNDLVVKVKVLKVLTK 452
Score = 59.3 bits (142), Expect = 1e-08
Identities = 43/136 (31%), Positives = 65/136 (47%), Gaps = 22/136 (16%)
Query: 1 MSRVRDAGCVAAGIVIGAGAWYCVYKYTRGRDQTKK-----------------RMAKPKN 43
M R R+AGCVAAG+VIGAGA YCVY+ GRD+ +K + K
Sbjct: 1 MGRTREAGCVAAGVVIGAGACYCVYRLAWGRDENEKIWDEDEESTDTSEIGVETVKGAKT 60
Query: 44 RAVAGTGARARAGLRAGFTIDLGSGFSPPTPVRAEAEDRA----QDEASAL-DTVGAEAV 98
A AG+GA+ + + LG P +A + + + +A AL +T+ +A
Sbjct: 61 NAGAGSGAKLQGDSEVKPEVSLGLEDCPGVKEKAHSGSHSGGGLEAKAKALFNTLKEQAS 120
Query: 99 APAASSAEAQSGAGSQ 114
A A A + +G++
Sbjct: 121 AKAGKGARVGTISGNR 136
>gi|29540566 armadillo repeat containing, X-linked 3 [Homo sapiens]
Length = 379
Score = 265 bits (676), Expect = 1e-70
Identities = 144/330 (43%), Positives = 204/330 (61%), Gaps = 23/330 (6%)
Query: 325 ANGGQAFLAEVPDSEEGE-SGWTDTESDSD---------------SEPETQRRGRGRRPV 368
A GG + + D + W+D + DS+ +E T+ R R R
Sbjct: 39 AEGGSGDVDDAGDCSGARYNDWSDDDDDSNESKSIVWYPPWARIGTEAGTRARARARARA 98
Query: 369 -----AMQKRPFPYEIDEILGVRDLRKVLALLQKSDDPFIQQVALLTLSNNANYSCNQET 423
A+QKR P D +L ++L+KVL L++ S+ P+I + AL+ L NNA Y+ N++
Sbjct: 99 TRARRAVQKRASPNSDDTVLSPQELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDI 158
Query: 424 IRKLGGLPIIANMINKTDPHIKEKALMAMNNLSENYENQGRLQVYMNKVMDDIMASNLNS 483
IR LGGLPI+A ++N DP +KEKAL+ +NNLS N ENQ RL+VYMN+V DD + S LNS
Sbjct: 159 IRDLGGLPIVAKILNTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNS 218
Query: 484 AVQVVGLKFLTNMTITNDYQHLLVNSIANFFRLLSQGGGKIKVEILKILSNFAENPDMLK 543
+VQ+ GL+ LTNMT+TN+YQH+L NSI++FFRL S G + K+++LK+L N AENP M +
Sbjct: 219 SVQLAGLRLLTNMTVTNEYQHMLANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTR 278
Query: 544 KLLSTQVPASFSSLYNSYVESEILINALTLFEIIYDNLRAEVF--NYREFNKGSLFYLCT 601
+LL QVP+S SL+N E+++ L +FE I DN + E +F +GSLF+
Sbjct: 279 ELLRAQVPSSLGSLFNKKENKEVILKLLVIFENINDNFKWEENEPTQNQFGEGSLFFFLK 338
Query: 602 TSGVCVKKIRALANHHDLLVKVKVIKLVNK 631
VC K+ + +HHD LVKVKV K + K
Sbjct: 339 EFQVCADKVLGIESHHDFLVKVKVGKFMAK 368
Score = 54.7 bits (130), Expect = 3e-07
Identities = 40/110 (36%), Positives = 51/110 (46%), Gaps = 7/110 (6%)
Query: 1 MSRVRDAGCVAAGIVIGAGAWYCVYKYTRGRDQTKKRMAKPKNRAVAGTGARARAGLRAG 60
M R G V AG+VIGAGA YC+Y+ TRGR Q K++MA+ + V G + A
Sbjct: 1 MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCSGARYNDW 60
Query: 61 FTIDLGSG-------FSPPTPVRAEAEDRAQDEASALDTVGAEAVAPAAS 103
D S + P + EA RA+ A A T AV AS
Sbjct: 61 SDDDDDSNESKSIVWYPPWARIGTEAGTRARARARARATRARRAVQKRAS 110
>gi|29540564 armadillo repeat containing, X-linked 3 [Homo sapiens]
Length = 379
Score = 265 bits (676), Expect = 1e-70
Identities = 144/330 (43%), Positives = 204/330 (61%), Gaps = 23/330 (6%)
Query: 325 ANGGQAFLAEVPDSEEGE-SGWTDTESDSD---------------SEPETQRRGRGRRPV 368
A GG + + D + W+D + DS+ +E T+ R R R
Sbjct: 39 AEGGSGDVDDAGDCSGARYNDWSDDDDDSNESKSIVWYPPWARIGTEAGTRARARARARA 98
Query: 369 -----AMQKRPFPYEIDEILGVRDLRKVLALLQKSDDPFIQQVALLTLSNNANYSCNQET 423
A+QKR P D +L ++L+KVL L++ S+ P+I + AL+ L NNA Y+ N++
Sbjct: 99 TRARRAVQKRASPNSDDTVLSPQELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDI 158
Query: 424 IRKLGGLPIIANMINKTDPHIKEKALMAMNNLSENYENQGRLQVYMNKVMDDIMASNLNS 483
IR LGGLPI+A ++N DP +KEKAL+ +NNLS N ENQ RL+VYMN+V DD + S LNS
Sbjct: 159 IRDLGGLPIVAKILNTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNS 218
Query: 484 AVQVVGLKFLTNMTITNDYQHLLVNSIANFFRLLSQGGGKIKVEILKILSNFAENPDMLK 543
+VQ+ GL+ LTNMT+TN+YQH+L NSI++FFRL S G + K+++LK+L N AENP M +
Sbjct: 219 SVQLAGLRLLTNMTVTNEYQHMLANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTR 278
Query: 544 KLLSTQVPASFSSLYNSYVESEILINALTLFEIIYDNLRAEVF--NYREFNKGSLFYLCT 601
+LL QVP+S SL+N E+++ L +FE I DN + E +F +GSLF+
Sbjct: 279 ELLRAQVPSSLGSLFNKKENKEVILKLLVIFENINDNFKWEENEPTQNQFGEGSLFFFLK 338
Query: 602 TSGVCVKKIRALANHHDLLVKVKVIKLVNK 631
VC K+ + +HHD LVKVKV K + K
Sbjct: 339 EFQVCADKVLGIESHHDFLVKVKVGKFMAK 368
Score = 54.7 bits (130), Expect = 3e-07
Identities = 40/110 (36%), Positives = 51/110 (46%), Gaps = 7/110 (6%)
Query: 1 MSRVRDAGCVAAGIVIGAGAWYCVYKYTRGRDQTKKRMAKPKNRAVAGTGARARAGLRAG 60
M R G V AG+VIGAGA YC+Y+ TRGR Q K++MA+ + V G + A
Sbjct: 1 MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCSGARYNDW 60
Query: 61 FTIDLGSG-------FSPPTPVRAEAEDRAQDEASALDTVGAEAVAPAAS 103
D S + P + EA RA+ A A T AV AS
Sbjct: 61 SDDDDDSNESKSIVWYPPWARIGTEAGTRARARARARATRARRAVQKRAS 110
>gi|7705274 armadillo repeat containing, X-linked 3 [Homo sapiens]
Length = 379
Score = 265 bits (676), Expect = 1e-70
Identities = 144/330 (43%), Positives = 204/330 (61%), Gaps = 23/330 (6%)
Query: 325 ANGGQAFLAEVPDSEEGE-SGWTDTESDSD---------------SEPETQRRGRGRRPV 368
A GG + + D + W+D + DS+ +E T+ R R R
Sbjct: 39 AEGGSGDVDDAGDCSGARYNDWSDDDDDSNESKSIVWYPPWARIGTEAGTRARARARARA 98
Query: 369 -----AMQKRPFPYEIDEILGVRDLRKVLALLQKSDDPFIQQVALLTLSNNANYSCNQET 423
A+QKR P D +L ++L+KVL L++ S+ P+I + AL+ L NNA Y+ N++
Sbjct: 99 TRARRAVQKRASPNSDDTVLSPQELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDI 158
Query: 424 IRKLGGLPIIANMINKTDPHIKEKALMAMNNLSENYENQGRLQVYMNKVMDDIMASNLNS 483
IR LGGLPI+A ++N DP +KEKAL+ +NNLS N ENQ RL+VYMN+V DD + S LNS
Sbjct: 159 IRDLGGLPIVAKILNTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNS 218
Query: 484 AVQVVGLKFLTNMTITNDYQHLLVNSIANFFRLLSQGGGKIKVEILKILSNFAENPDMLK 543
+VQ+ GL+ LTNMT+TN+YQH+L NSI++FFRL S G + K+++LK+L N AENP M +
Sbjct: 219 SVQLAGLRLLTNMTVTNEYQHMLANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTR 278
Query: 544 KLLSTQVPASFSSLYNSYVESEILINALTLFEIIYDNLRAEVF--NYREFNKGSLFYLCT 601
+LL QVP+S SL+N E+++ L +FE I DN + E +F +GSLF+
Sbjct: 279 ELLRAQVPSSLGSLFNKKENKEVILKLLVIFENINDNFKWEENEPTQNQFGEGSLFFFLK 338
Query: 602 TSGVCVKKIRALANHHDLLVKVKVIKLVNK 631
VC K+ + +HHD LVKVKV K + K
Sbjct: 339 EFQVCADKVLGIESHHDFLVKVKVGKFMAK 368
Score = 54.7 bits (130), Expect = 3e-07
Identities = 40/110 (36%), Positives = 51/110 (46%), Gaps = 7/110 (6%)
Query: 1 MSRVRDAGCVAAGIVIGAGAWYCVYKYTRGRDQTKKRMAKPKNRAVAGTGARARAGLRAG 60
M R G V AG+VIGAGA YC+Y+ TRGR Q K++MA+ + V G + A
Sbjct: 1 MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCSGARYNDW 60
Query: 61 FTIDLGSG-------FSPPTPVRAEAEDRAQDEASALDTVGAEAVAPAAS 103
D S + P + EA RA+ A A T AV AS
Sbjct: 61 SDDDDDSNESKSIVWYPPWARIGTEAGTRARARARARATRARRAVQKRAS 110
>gi|238776793 SVH protein isoform b [Homo sapiens]
Length = 308
Score = 236 bits (602), Expect = 5e-62
Identities = 129/281 (45%), Positives = 189/281 (67%), Gaps = 8/281 (2%)
Query: 358 TQRRGRGRRPVAMQKRPFPYEI-----DEILGVRDLRKVLALLQKSDDPFIQQVALLTLS 412
T+ R RG R + ++ ++ D++L L+K+L LL+ ++DP I + AL+TL
Sbjct: 28 TRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALITLG 87
Query: 413 NNANYSCNQETIRKLGGLPIIANMINKTDPHIKEKALMAMNNLSENYENQGRLQVYMNKV 472
NNA +S NQ IR+LGG+PI+AN IN ++ IKEKAL A+NNLS N ENQ ++++Y+++V
Sbjct: 88 NNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYISQV 147
Query: 473 MDDIMASNLNSAVQVVGLKFLTNMTITNDYQHLLVNSIANFFRLLSQGGGKIKVEILKIL 532
+D+ + LNSAVQ+ GL LTNMT+TND+QH+L + I + F++L G G KV++LK+L
Sbjct: 148 CEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTKVQVLKLL 207
Query: 533 SNFAENPDMLKKLLSTQVPASFSSLYNSYVESEILINALTLFEIIYDNLRAE--VFNYRE 590
N +ENP M + LL QV +SF SLY+S+V EIL+ LTLF+ I + L+ E +
Sbjct: 208 LNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQPT 267
Query: 591 FNKGSLFYLCTTSGVCVKKIRALANHHDLLVKVKVIKLVNK 631
F +GSLF+L C +KIRAL +HHD VK KV+ ++ K
Sbjct: 268 FTEGSLFFL-LHGEECAQKIRALVDHHDAEVKEKVVTIIPK 307
Score = 43.9 bits (102), Expect = 5e-04
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 1 MSRVRDAGCVAAGIVIGAGAWYCVYKYTRGR 31
M R AG VAAG+++GAGA YC+Y+ TRGR
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGR 31
>gi|31377663 SVH protein isoform a [Homo sapiens]
Length = 343
Score = 235 bits (599), Expect = 1e-61
Identities = 138/326 (42%), Positives = 199/326 (61%), Gaps = 24/326 (7%)
Query: 309 MGFRPGDGAAAAAAASANGGQAFLAEVPDSE-EGESGWTDTESDSDSEPETQRRGRGRRP 367
+G R A A ++ G + P + ES W+ T S+PE G
Sbjct: 38 LGIRSSKSAGALEEGTSEGQLCGRSARPQTGGTWESQWSKT-----SQPEDLTDG----- 87
Query: 368 VAMQKRPFPYEIDEILGVRDLRKVLALLQKSDDPFIQQVALLTLSNNANYSCNQETIRKL 427
D++L L+K+L LL+ ++DP I + AL+TL NNA +S NQ IR+L
Sbjct: 88 ----------SYDDVLNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIREL 137
Query: 428 GGLPIIANMINKTDPHIKEKALMAMNNLSENYENQGRLQVYMNKVMDDIMASNLNSAVQV 487
GG+PI+AN IN ++ IKEKAL A+NNLS N ENQ ++++Y+++V +D+ + LNSAVQ+
Sbjct: 138 GGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQL 197
Query: 488 VGLKFLTNMTITNDYQHLLVNSIANFFRLLSQGGGKIKVEILKILSNFAENPDMLKKLLS 547
GL LTNMT+TND+QH+L + I + F++L G G KV++LK+L N +ENP M + LL
Sbjct: 198 AGLTLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTKVQVLKLLLNLSENPAMTEGLLR 257
Query: 548 TQVPASFSSLYNSYVESEILINALTLFEIIYDNLRAE--VFNYREFNKGSLFYLCTTSGV 605
QV +SF SLY+S+V EIL+ LTLF+ I + L+ E + F +GSLF+L
Sbjct: 258 AQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFL-LHGEE 316
Query: 606 CVKKIRALANHHDLLVKVKVIKLVNK 631
C +KIRAL +HHD VK KV+ ++ K
Sbjct: 317 CAQKIRALVDHHDAEVKEKVVTIIPK 342
Score = 43.9 bits (102), Expect = 5e-04
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 1 MSRVRDAGCVAAGIVIGAGAWYCVYKYTRGR 31
M R AG VAAG+++GAGA YC+Y+ TRGR
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGR 31
>gi|239757861 PREDICTED: similar to armadillo repeat containing,
X-linked 4 [Homo sapiens]
Length = 2382
Score = 204 bits (518), Expect = 3e-52
Identities = 166/617 (26%), Positives = 276/617 (44%), Gaps = 62/617 (10%)
Query: 77 AEAEDRAQDEASALDTVGAEAVAPAASSAEAQSGAGSQAQEADGAG-------------- 122
A A +A E+ A G EA+ + +E Q+ GS A+ D A
Sbjct: 1765 AGAGSQASGESWAGSRPGNEAIGGSRMGSEDQATGGSWARSEDQASGRFQVSFEVEANEG 1824
Query: 123 --VGPKAESVVGA-----AMASAIAPPPGVTEALGAAEAPAMAGAPKVAEAPREAETSRA 175
GP AE+V+G+ A ++ P EA A+ + A A + E + S
Sbjct: 1825 FWFGPGAEAVIGSWCWTEEKADIVSRPDDKDEATTASRSRAGEEAMICSRIEAENKASSG 1884
Query: 176 A-------------VPPGTVVPTEAAAPTEVTEGPGVAAPTKVAEAPGVASPTEAAEA-- 220
+ V EA A E G G A + G TE+
Sbjct: 1885 SWIRSEEVAYMGSCVGAEAGAGAEAGAGAEAGAGAGAEAGAEAGAGAGAGPGTESGAGVW 1944
Query: 221 PVPATPTGAAAPTGAAESPGTSGSPRTAVVPGTSAAKKATPGAHTGAIPKATSA----TG 276
T + GA E G V +++++P ++ A +
Sbjct: 1945 SWDGDATTVESRLGAGEEAGVESWTLARNVGEDELSRESSPDIEEISLRSLFWAESENSN 2004
Query: 277 AVPKGGGKGVTRSRNGGKGKGKKSKVEVD---ELGMGFRPGD--------GAAAAAAASA 325
GK + G K K E ++G F G+ A A S+
Sbjct: 2005 TFRSKSGKDASFESGAGDNTSIKDKFEAAGGVDIGSWFCAGNENTSEDKSAPKAKAKKSS 2064
Query: 326 NGGQAFLAEVPD----SEEGESGWTDTESDSDSEPETQRRGRGRRPVAMQKRPFPYEI-- 379
+ VP S +G W++T+ SE R+ ++ P+
Sbjct: 2065 ESRGIYPYMVPGAGMGSWDGAMIWSETKFAHQSEASFPVEDESRKQTRTGEKTRPWSCRC 2124
Query: 380 --DEILGVRDLRKVLALLQKSDDPFIQQVALLTLSNNANYSCNQETIRKLGGLPIIANMI 437
+ + RDL K++ +++ ++DP + ++A L N+A+YS + E +R +GG+ +I +++
Sbjct: 2125 KHEANMDPRDLEKLICMIEMTEDPSVHEIANNALYNSADYSYSHEVVRNVGGISVIESLL 2184
Query: 438 NKTDPHIKEKALMAMNNLSENYENQGRLQVYMNKVMDDIMASNLNSAVQVVGLKFLTNMT 497
N P +++KAL A+NN+S EN +++ Y+N+V +D + LNS VQ+ GL+ + ++T
Sbjct: 2185 NNPYPSVRQKALNALNNISVAAENHRKVKTYLNQVCEDTVTYPLNSNVQLAGLRLIRHLT 2244
Query: 498 ITNDYQHLLVNSIANFFRLLSQGGGKIKVEILKILSNFAENPDMLKKLLSTQVPASFSSL 557
IT++YQH++ N I+ F RLL+ G G+ K +L +L NF++NP M K LL P S ++
Sbjct: 2245 ITSEYQHMVTNYISEFLRLLTVGSGETKDHVLGMLLNFSKNPSMTKDLLIANAPTSLINI 2304
Query: 558 YNSYVESEILINALTLFEII--YDNLRAEVFNYREFNKGSLFYLCTTSGVCVKKIRALAN 615
++ E ++NAL+LFE I + RA+ F +F+K SL++L C KK+RALA
Sbjct: 2305 FSKKETKENILNALSLFENINYHFKRRAKAFTQDKFSKNSLYFLFQRPKACAKKLRALAA 2364
Query: 616 H-HDLLVKVKVIKLVNK 631
+D VK +V L++K
Sbjct: 2365 ECNDPEVKERVELLISK 2381
Score = 61.2 bits (147), Expect = 3e-09
Identities = 86/337 (25%), Positives = 127/337 (37%), Gaps = 61/337 (18%)
Query: 1 MSRVRDAGCVAAGIVIGAGAWYCVYKYTRGRDQTKKRMAKPKNRAVAGTGARARAGLRAG 60
M R+++ G V AG+VI AG Y +YK+T+GR Q+ + +A R G
Sbjct: 93 MGRIQEVGWVTAGLVIWAGTCYYIYKFTKGRAQSVRTLA------------------RNG 134
Query: 61 FTIDLGS--GFSPPTPVRAEAEDRAQDEASALDTVGAEAVAPAASSAEAQS--------G 110
T+ + + G T EAE + + + +GAE A + AE ++
Sbjct: 135 STVKMETVVGVQSQTLAINEAEIKTKPQVE----IGAETGARSGPGAEVETKATAIAIHR 190
Query: 111 AGSQAQEADGAGVGPKAESVVGA---AMASAIAPPPGVTEALGAAEAPAMAGAPKVAEA- 166
A SQA+ GA ++ES V A M A+ +TE A AM A +A
Sbjct: 191 ANSQAKAMVGAEPETQSESKVVAGTLVMTEAVT----LTEVKAKAREVAMKEAVTQTDAE 246
Query: 167 -----PREAETSRAAVPPGTVVPTEA--AAPTEVTEGPGVAAPTKVAEAPGVASPTEAAE 219
+EA T A V TEA A T+ + A + + + +E
Sbjct: 247 AGKIVKKEAVTQTKAKAWALVAKTEAKREAMTQTKAETHILAEKETEINRVMVTQSETLA 306
Query: 220 APVPATPTGAAAPTGAAESPGTSGSPRTAVVPGTSAAKKATPGAHTGAIPKATSATGAVP 279
P GA TG + T T V T + +A PGA A
Sbjct: 307 VPREVAKMGATNKTGIVDETKTRALEETVSVAKTQS--EARPGATVDA------------ 352
Query: 280 KGGGKGVTRSRNGGKGKGKKSKVEVDELGMGFRPGDG 316
+G G++R G K V ++ PG G
Sbjct: 353 RGNPNGMSREVAGVDMKSCAQSQAVTKIQGDDMPGTG 389
Score = 37.7 bits (86), Expect = 0.032
Identities = 85/357 (23%), Positives = 123/357 (34%), Gaps = 33/357 (9%)
Query: 38 MAKPKNRAVAGTGARARAGLRAGFTIDLGSGFSPPTPVRAEAEDRAQDEASALDTVGAEA 97
+A PK AGT A+ + AG + G + +EAE A+DEA A+
Sbjct: 1105 IAVPKAGTGAGTRHSAQPQIVAGSQGETLPGARDKSMSTSEAEATAEDEAY------AKP 1158
Query: 98 VAPAASSAEAQSGAGSQA--------QEADGAGVGPKAESVVGAAMASAIAPPPGVTE-- 147
A A ++E++ G+G+QA + G+G + + G E
Sbjct: 1159 EAEAMPTSESEGGSGTQACRKTQPNIHDYYWNGIGVEDWIAAERWIKFRFQTMDGDWENS 1218
Query: 148 -ALGAAEAPAMAGAPKVAEAPREAETSRAAVPPGTVVPTEAAAPTEVTEGPGVAAPTKVA 206
+ E A G+ A S A T V + A A E G G A
Sbjct: 1219 VSWADDENEASIGSWSGASDKAGIIRSWAVACDETSVKSWAGARAENVVGIGTWARAGEQ 1278
Query: 207 EAPGVASPTEAAEAPVPATPTGAAAPTGAAESPGTSGSPRTA---VVPGTSAAKKATPGA 263
+ G+ + + +E A TG AE+ + GS A + AA +A+ G+
Sbjct: 1279 ASGGLWAGGQTSEGTWAGDKASGGAWTG-AENQASGGSWALAGNQAIGELWAAGQASDGS 1337
Query: 264 HTGAIPKATSATGAVPKGGG-----KGVTRSRNGGKGKGKKSKVEVDELGMGFRPGDGAA 318
G S G GG + G G G S V G+ + G G+
Sbjct: 1338 WPGGQASGVSWVGEEAIGGSWTGAENQASEGSWAGAGAGNMSSVSY-WAGVVDQAGGGSW 1396
Query: 319 AAAAASANGGQAFLAEVPDSEEGESGWT----DTESDSDSEPETQRRGRGRRPVAMQ 371
A + + GG D GE W S PE Q GR A Q
Sbjct: 1397 AGTSDQSGGGSK--PRFEDQASGEGSWAGAGGQASGGSMLGPEDQSSGRSWADTADQ 1451
Score = 33.9 bits (76), Expect = 0.47
Identities = 82/345 (23%), Positives = 125/345 (36%), Gaps = 58/345 (16%)
Query: 30 GRDQTKKRMAKPKNRAVAGTGARARAGLRA----GFTIDLGSGFSPPTPVRAEAE---DR 82
G D + MA+ + A+ T +AR +A G +D+ + P V+ AE D
Sbjct: 597 GVDMKAQGMAQSQGEALPNTRGKARGKAKAKCKTGPGMDMKTCTQPQAGVKTPAEALLDS 656
Query: 83 AQD---EASALDTVGAEA--------VAPAASSAEAQSGAGSQAQEAD------GAGVGP 125
D +A G +A + A EA GA ++ + GAG G
Sbjct: 657 RVDGRGNPNATSKAGTKADQRVCGQPLVVANPQGEALPGAKNKVKGNPHTVLKVGAGEGT 716
Query: 126 ----KAESVV---GAAMASAIAPPPGVTEALGAAEAP--AMAGAPKVAEAPREAET---S 173
+ E+VV G A+ G + AE AM A A + E S
Sbjct: 717 TDSAQPEAVVSFQGEALLGTKNKVKGNPNVVLKAEVGEGAMGTAQLQIMASSKGEALLDS 776
Query: 174 RAAVPPGTVVPTEAAAPTEVTEG--PGVAAPTKVAEAPGV-----ASPTEAAEAPVPATP 226
+ V + ++A A T+ T P + A ++ PG +PT + V
Sbjct: 777 KNKVKGNSNAVSKAGAGTDTTGSVQPQIVANSQGEVLPGAKNKIRGNPTTVPNSGVGPYT 836
Query: 227 TGAAAPTGAAESPGTSGSPRTAVVPGTSAAKKATPGAHTGAIPKATSATGAV----PKGG 282
T +A P A S G V+PG K A+ A+ KA + GA P+
Sbjct: 837 TDSARPQAVANSQGE-------VLPGAKNKVK----ANLNAVSKAEAGMGATGSVQPQAV 885
Query: 283 GKGVTRSRNGGKGKGKKSKVEVDELGMGFRPGDGAAAAAAASANG 327
+ G K K + + V + G G A A A++ G
Sbjct: 886 ANSHCETLPGAKNKVRGNWNAVSKAGAGMDTRGSAQPQAVANSQG 930
Score = 32.7 bits (73), Expect = 1.0
Identities = 39/158 (24%), Positives = 67/158 (42%), Gaps = 7/158 (4%)
Query: 40 KPKNRAVAGTGARARAGLRAGFTIDLGSGFSPPTPVRAEAEDRAQDEASALDTVGAEAVA 99
K K + A + A A AG+ + + + F V A+++ + ++A+ AEA A
Sbjct: 1019 KVKGNSNAISKAEAGAGIMGSVQVQVVASFQ--GEVLPGAKNKVRGNSNAVPK--AEAGA 1074
Query: 100 PAASSAEAQSGAGSQAQEADGAGVGPKAESV-VGAAMASAIAPPPGVTEALGAAEAPAMA 158
SA+ Q+ A SQ++ GA K ++ V A A + + ++ +
Sbjct: 1075 DTVGSAQPQAVANSQSETLLGARNKVKGNTIAVPKAGTGAGTRHSAQPQIVAGSQGETLP 1134
Query: 159 GAPKVAEAPREAETSRAAVPPGTVVPTEAAAPTEVTEG 196
GA + + EAE + A P A PT +EG
Sbjct: 1135 GARDKSMSTSEAEAT--AEDEAYAKPEAEAMPTSESEG 1170
Score = 31.6 bits (70), Expect = 2.3
Identities = 37/148 (25%), Positives = 58/148 (39%), Gaps = 33/148 (22%)
Query: 12 AGIVIGAGAWYCVYKYTRGRDQTKKRMAKPKNRAVAGTGARARAG--------------- 56
A VIG+ W ++ +++P ++ A T +R+RAG
Sbjct: 1831 AEAVIGSWCW---------TEEKADIVSRPDDKDEATTASRSRAGEEAMICSRIEAENKA 1881
Query: 57 -----LRAGFTIDLGSGFSPPTPVRAEAEDRAQDEASALDTVGAEAVAPAASSAEAQSGA 111
+R+ +GS AEA A+ A A GAEA A A + +SGA
Sbjct: 1882 SSGSWIRSEEVAYMGSCVGAEAGAGAEAGAGAEAGAGAGAEAGAEAGAGAGAGPGTESGA 1941
Query: 112 GSQAQEADGAGVGPKAESVVGAAMASAI 139
G + + D V ES +GA + +
Sbjct: 1942 GVWSWDGDATTV----ESRLGAGEEAGV 1965
>gi|169165522 PREDICTED: similar to SVH protein isoform 1 [Homo
sapiens]
Length = 284
Score = 202 bits (513), Expect = 1e-51
Identities = 117/281 (41%), Positives = 175/281 (62%), Gaps = 32/281 (11%)
Query: 358 TQRRGRGRRPVAMQKRPFPYEI-----DEILGVRDLRKVLALLQKSDDPFIQQVALLTLS 412
T+ R RG R + ++ ++ D++L L+K+L LL+ ++DP I + AL+TL
Sbjct: 28 TRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALITLG 87
Query: 413 NNANYSCNQETIRKLGGLPIIANMINKTDPHIKEKALMAMNNLSENYENQGRLQVYMNKV 472
NNA +S NQ IR+LGG+PI+AN IN ++ IKEKAL A+NNLS N ENQ ++++Y+++V
Sbjct: 88 NNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYISQV 147
Query: 473 MDDIMASNLNSAVQVVGLKFLTNMTITNDYQHLLVNSIANFFRLLSQGGGKIKVEILKIL 532
+D+ + LNSAVQ+ GL+ LTNMT+TND+QH+L + I + F++L G G
Sbjct: 148 CEDVFSGPLNSAVQLAGLRLLTNMTVTNDHQHMLHSYITDLFQVLLTGNG---------- 197
Query: 533 SNFAENPDMLKKLLSTQVPASFSSLYNSYVESEILINALTLFEIIYDNLRAE--VFNYRE 590
+T+V +SF SLY+S+V EIL+ LTLF+ I + L+ E +
Sbjct: 198 --------------NTKVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQPT 243
Query: 591 FNKGSLFYLCTTSGVCVKKIRALANHHDLLVKVKVIKLVNK 631
F +GSLF+L C +KIRAL +HHD VK KV+ ++ K
Sbjct: 244 FTEGSLFFL-LHGEECAQKIRALVDHHDAEVKEKVVTIIPK 283
Score = 43.9 bits (102), Expect = 5e-04
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 1 MSRVRDAGCVAAGIVIGAGAWYCVYKYTRGR 31
M R AG VAAG+++GAGA YC+Y+ TRGR
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGR 31
>gi|238776797 SVH protein isoform e [Homo sapiens]
Length = 284
Score = 201 bits (510), Expect = 2e-51
Identities = 117/281 (41%), Positives = 174/281 (61%), Gaps = 32/281 (11%)
Query: 358 TQRRGRGRRPVAMQKRPFPYEI-----DEILGVRDLRKVLALLQKSDDPFIQQVALLTLS 412
T+ R RG R + ++ ++ D++L L+K+L LL+ ++DP I + AL+TL
Sbjct: 28 TRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALITLG 87
Query: 413 NNANYSCNQETIRKLGGLPIIANMINKTDPHIKEKALMAMNNLSENYENQGRLQVYMNKV 472
NNA +S NQ IR+LGG+PI+AN IN ++ IKEKAL A+NNLS N ENQ ++++Y+++V
Sbjct: 88 NNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYISQV 147
Query: 473 MDDIMASNLNSAVQVVGLKFLTNMTITNDYQHLLVNSIANFFRLLSQGGGKIKVEILKIL 532
+D+ + LNSAVQ+ GL LTNMT+TND+QH+L + I + F++L G G
Sbjct: 148 CEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHMLHSYITDLFQVLLTGNG---------- 197
Query: 533 SNFAENPDMLKKLLSTQVPASFSSLYNSYVESEILINALTLFEIIYDNLRAE--VFNYRE 590
+T+V +SF SLY+S+V EIL+ LTLF+ I + L+ E +
Sbjct: 198 --------------NTKVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQPT 243
Query: 591 FNKGSLFYLCTTSGVCVKKIRALANHHDLLVKVKVIKLVNK 631
F +GSLF+L C +KIRAL +HHD VK KV+ ++ K
Sbjct: 244 FTEGSLFFL-LHGEECAQKIRALVDHHDAEVKEKVVTIIPK 283
Score = 43.9 bits (102), Expect = 5e-04
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 1 MSRVRDAGCVAAGIVIGAGAWYCVYKYTRGR 31
M R AG VAAG+++GAGA YC+Y+ TRGR
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGR 31
>gi|169165931 PREDICTED: similar to SVH protein isoform 1 [Homo
sapiens]
Length = 284
Score = 201 bits (510), Expect = 2e-51
Identities = 116/281 (41%), Positives = 175/281 (62%), Gaps = 32/281 (11%)
Query: 358 TQRRGRGRRPVAMQKRPFPYEI-----DEILGVRDLRKVLALLQKSDDPFIQQVALLTLS 412
T+ R RG R + ++ ++ D++L L+K+L LL+ ++DP I + AL+TL
Sbjct: 28 TRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALITLG 87
Query: 413 NNANYSCNQETIRKLGGLPIIANMINKTDPHIKEKALMAMNNLSENYENQGRLQVYMNKV 472
NNA +S NQ IR+LGG+PI+AN IN ++ IK+KAL A+NNLS N ENQ ++++Y+++V
Sbjct: 88 NNAAFSVNQAIIRELGGIPIVANKINHSNQSIKDKALNALNNLSVNVENQIKIKIYISQV 147
Query: 473 MDDIMASNLNSAVQVVGLKFLTNMTITNDYQHLLVNSIANFFRLLSQGGGKIKVEILKIL 532
+D+ + LNSAVQ+ GL+ LTNMT+TND+QH+L + I + F++L G G
Sbjct: 148 CEDVFSGPLNSAVQLAGLRLLTNMTVTNDHQHMLHSYITDLFQVLLTGNG---------- 197
Query: 533 SNFAENPDMLKKLLSTQVPASFSSLYNSYVESEILINALTLFEIIYDNLRAE--VFNYRE 590
+T+V +SF SLY+S+V EIL+ LTLF+ I + L+ E +
Sbjct: 198 --------------NTKVDSSFLSLYDSHVAKEILLRVLTLFQHIKNCLKIEGHLAVQPT 243
Query: 591 FNKGSLFYLCTTSGVCVKKIRALANHHDLLVKVKVIKLVNK 631
F +GSLF+L C +KIRAL +HHD VK KV+ ++ K
Sbjct: 244 FTEGSLFFL-LHGEECAQKIRALVDHHDAEVKEKVVTIIPK 283
Score = 43.9 bits (102), Expect = 5e-04
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 1 MSRVRDAGCVAAGIVIGAGAWYCVYKYTRGR 31
M R AG VAAG+++GAGA YC+Y+ TRGR
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGR 31
>gi|113414573 PREDICTED: similar to SVH protein isoform 2 [Homo
sapiens]
Length = 284
Score = 201 bits (510), Expect = 2e-51
Identities = 116/281 (41%), Positives = 175/281 (62%), Gaps = 32/281 (11%)
Query: 358 TQRRGRGRRPVAMQKRPFPYEI-----DEILGVRDLRKVLALLQKSDDPFIQQVALLTLS 412
T+ R RG R + ++ ++ D++L L+K+L LL+ ++DP I + AL+TL
Sbjct: 28 TRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALITLG 87
Query: 413 NNANYSCNQETIRKLGGLPIIANMINKTDPHIKEKALMAMNNLSENYENQGRLQVYMNKV 472
NNA +S NQ IR+LGG+PI+AN IN ++ IK+KAL A+NNLS N ENQ ++++Y+++V
Sbjct: 88 NNAAFSVNQAIIRELGGIPIVANKINHSNQSIKDKALNALNNLSVNVENQIKIKIYISQV 147
Query: 473 MDDIMASNLNSAVQVVGLKFLTNMTITNDYQHLLVNSIANFFRLLSQGGGKIKVEILKIL 532
+D+ + LNSAVQ+ GL+ LTNMT+TND+QH+L + I + F++L G G
Sbjct: 148 CEDVFSGPLNSAVQLAGLRLLTNMTVTNDHQHMLHSYITDLFQVLLTGNG---------- 197
Query: 533 SNFAENPDMLKKLLSTQVPASFSSLYNSYVESEILINALTLFEIIYDNLRAE--VFNYRE 590
+T+V +SF SLY+S+V EIL+ LTLF+ I + L+ E +
Sbjct: 198 --------------NTKVDSSFLSLYDSHVAKEILLRVLTLFQHIKNCLKIEGHLAVQPT 243
Query: 591 FNKGSLFYLCTTSGVCVKKIRALANHHDLLVKVKVIKLVNK 631
F +GSLF+L C +KIRAL +HHD VK KV+ ++ K
Sbjct: 244 FTEGSLFFL-LHGEECAQKIRALVDHHDAEVKEKVVTIIPK 283
Score = 43.9 bits (102), Expect = 5e-04
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 1 MSRVRDAGCVAAGIVIGAGAWYCVYKYTRGR 31
M R AG VAAG+++GAGA YC+Y+ TRGR
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGR 31
>gi|169165524 PREDICTED: similar to SVH protein isoform 2 [Homo
sapiens]
Length = 253
Score = 150 bits (378), Expect = 4e-36
Identities = 101/281 (35%), Positives = 149/281 (53%), Gaps = 63/281 (22%)
Query: 358 TQRRGRGRRPVAMQKRPFPYEI-----DEILGVRDLRKVLALLQKSDDPFIQQVALLTLS 412
T+ R RG R + ++ ++ D++L L+K+L LL+ ++DP I + AL+TL
Sbjct: 28 TRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALITLG 87
Query: 413 NNANYSCNQETIRKLGGLPIIANMINKTDPHIKEKALMAMNNLSENYENQGRLQVYMNKV 472
NNA +S NQ IR+LGG+PI+AN IN ++ IKEKAL A+NNLS N ENQ ++++Y+++V
Sbjct: 88 NNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYISQV 147
Query: 473 MDDIMASNLNSAVQVVGLKFLTNMTITNDYQHLLVNSIANFFRLLSQGGGKIKVEILKIL 532
+D+ + LNSAV L G G KV+
Sbjct: 148 CEDVFSGPLNSAV-------------------------------LLTGNGNTKVD----- 171
Query: 533 SNFAENPDMLKKLLSTQVPASFSSLYNSYVESEILINALTLFEIIYDNLRAE--VFNYRE 590
+SF SLY+S+V EIL+ LTLF+ I + L+ E +
Sbjct: 172 -------------------SSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQPT 212
Query: 591 FNKGSLFYLCTTSGVCVKKIRALANHHDLLVKVKVIKLVNK 631
F +GSLF+L C +KIRAL +HHD VK KV+ ++ K
Sbjct: 213 FTEGSLFFL-LHGEECAQKIRALVDHHDAEVKEKVVTIIPK 252
Score = 43.9 bits (102), Expect = 5e-04
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 1 MSRVRDAGCVAAGIVIGAGAWYCVYKYTRGR 31
M R AG VAAG+++GAGA YC+Y+ TRGR
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGR 31
>gi|113415138 PREDICTED: similar to SVH protein isoform 2 [Homo
sapiens]
Length = 253
Score = 149 bits (375), Expect = 1e-35
Identities = 100/281 (35%), Positives = 149/281 (53%), Gaps = 63/281 (22%)
Query: 358 TQRRGRGRRPVAMQKRPFPYEI-----DEILGVRDLRKVLALLQKSDDPFIQQVALLTLS 412
T+ R RG R + ++ ++ D++L L+K+L LL+ ++DP I + AL+TL
Sbjct: 28 TRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALITLG 87
Query: 413 NNANYSCNQETIRKLGGLPIIANMINKTDPHIKEKALMAMNNLSENYENQGRLQVYMNKV 472
NNA +S NQ IR+LGG+PI+AN IN ++ IK+KAL A+NNLS N ENQ ++++Y+++V
Sbjct: 88 NNAAFSVNQAIIRELGGIPIVANKINHSNQSIKDKALNALNNLSVNVENQIKIKIYISQV 147
Query: 473 MDDIMASNLNSAVQVVGLKFLTNMTITNDYQHLLVNSIANFFRLLSQGGGKIKVEILKIL 532
+D+ + LNSAV L G G KV+
Sbjct: 148 CEDVFSGPLNSAV-------------------------------LLTGNGNTKVD----- 171
Query: 533 SNFAENPDMLKKLLSTQVPASFSSLYNSYVESEILINALTLFEIIYDNLRAE--VFNYRE 590
+SF SLY+S+V EIL+ LTLF+ I + L+ E +
Sbjct: 172 -------------------SSFLSLYDSHVAKEILLRVLTLFQHIKNCLKIEGHLAVQPT 212
Query: 591 FNKGSLFYLCTTSGVCVKKIRALANHHDLLVKVKVIKLVNK 631
F +GSLF+L C +KIRAL +HHD VK KV+ ++ K
Sbjct: 213 FTEGSLFFL-LHGEECAQKIRALVDHHDAEVKEKVVTIIPK 252
Score = 43.9 bits (102), Expect = 5e-04
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 1 MSRVRDAGCVAAGIVIGAGAWYCVYKYTRGR 31
M R AG VAAG+++GAGA YC+Y+ TRGR
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGR 31
>gi|169165133 PREDICTED: similar to SVH protein isoform 1 [Homo
sapiens]
Length = 253
Score = 149 bits (375), Expect = 1e-35
Identities = 100/281 (35%), Positives = 149/281 (53%), Gaps = 63/281 (22%)
Query: 358 TQRRGRGRRPVAMQKRPFPYEI-----DEILGVRDLRKVLALLQKSDDPFIQQVALLTLS 412
T+ R RG R + ++ ++ D++L L+K+L LL+ ++DP I + AL+TL
Sbjct: 28 TRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALITLG 87
Query: 413 NNANYSCNQETIRKLGGLPIIANMINKTDPHIKEKALMAMNNLSENYENQGRLQVYMNKV 472
NNA +S NQ IR+LGG+PI+AN IN ++ IK+KAL A+NNLS N ENQ ++++Y+++V
Sbjct: 88 NNAAFSVNQAIIRELGGIPIVANKINHSNQSIKDKALNALNNLSVNVENQIKIKIYISQV 147
Query: 473 MDDIMASNLNSAVQVVGLKFLTNMTITNDYQHLLVNSIANFFRLLSQGGGKIKVEILKIL 532
+D+ + LNSAV L G G KV+
Sbjct: 148 CEDVFSGPLNSAV-------------------------------LLTGNGNTKVD----- 171
Query: 533 SNFAENPDMLKKLLSTQVPASFSSLYNSYVESEILINALTLFEIIYDNLRAE--VFNYRE 590
+SF SLY+S+V EIL+ LTLF+ I + L+ E +
Sbjct: 172 -------------------SSFLSLYDSHVAKEILLRVLTLFQHIKNCLKIEGHLAVQPT 212
Query: 591 FNKGSLFYLCTTSGVCVKKIRALANHHDLLVKVKVIKLVNK 631
F +GSLF+L C +KIRAL +HHD VK KV+ ++ K
Sbjct: 213 FTEGSLFFL-LHGEECAQKIRALVDHHDAEVKEKVVTIIPK 252
Score = 43.9 bits (102), Expect = 5e-04
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 1 MSRVRDAGCVAAGIVIGAGAWYCVYKYTRGR 31
M R AG VAAG+++GAGA YC+Y+ TRGR
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGR 31
>gi|41054846 armadillo repeat containing, X-linked 5 [Homo sapiens]
Length = 558
Score = 114 bits (286), Expect = 2e-25
Identities = 78/277 (28%), Positives = 150/277 (54%), Gaps = 10/277 (3%)
Query: 359 QRRGRGRRPVAMQKRPFPYEIDEILGVRDLRKVLALLQKSDDPFIQQVALLTLSNNANYS 418
QR G P A + + ++ ++ K++ALL+ + DPFI ++A + + + Y
Sbjct: 287 QREKYGPNPKACHCKSRGFSLEP----KEFDKLVALLKLTKDPFIHEIATMIMGISPAYP 342
Query: 419 CNQETIRKLGGLPIIANMINKTDPHIKEK--ALMAMNNLSENYENQGRLQVYMNKVMDDI 476
Q+ I +G +I N++N +P++KE AL +++ SE+ E + Y+++V I
Sbjct: 343 FTQDIIHDVGITVMIENLVN--NPNVKEHPGALSMVDDSSESSEEPKSGESYIHQVCKGI 400
Query: 477 MASNLNSAVQVVGLKFLTNMTITNDYQHLLVNSIANFFRLLSQGGGKIKVEILKILSNFA 536
++ LNS VQ+ GLK L +++I + +++ + I +F LL++G K K +LK+ S +
Sbjct: 401 ISCPLNSPVQLAGLKLLGHLSIKFEDHYVITSYIPDFLTLLNKGSVKTKFYVLKVFSCLS 460
Query: 537 ENPDMLKKLLSTQVPASFSSLYNSYVESEILINALTLFEII--YDNLRAEVFNYREFNKG 594
+N ++L+S +V +S + +N ++N + +FE I +A++F +F K
Sbjct: 461 KNHANTRELISAKVLSSLVAPFNKNESKANILNIIEIFENINFQFKTKAKLFTKEKFTKS 520
Query: 595 SLFYLCTTSGVCVKKIRALANHHDLLVKVKVIKLVNK 631
L + + +K++ LA H D V+ KVI+L+ K
Sbjct: 521 ELISIFQEAKQFGQKLQDLAEHSDPEVRDKVIRLILK 557
>gi|238776799 SVH protein isoform d [Homo sapiens]
Length = 249
Score = 112 bits (279), Expect = 1e-24
Identities = 85/279 (30%), Positives = 135/279 (48%), Gaps = 63/279 (22%)
Query: 358 TQRRGRGRRPVAMQKRPFPYEI-----DEILGVRDLRKVLALLQKSDDPFIQQVALLTLS 412
T+ R RG R + ++ ++ D++L L+K+L LL+ ++DP I + AL+TL
Sbjct: 28 TRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALITLG 87
Query: 413 NNANYSCNQETIRKLGGLPIIANMINKTDPHIKEKALMAMNNLSENYENQGRLQVYMNKV 472
NNA +S NQ IR+LGG+PI+AN IN ++ IKEKAL A+NNLS N ENQ +++V + K+
Sbjct: 88 NNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKVQVLKL 147
Query: 473 MDDIMASNLNSAVQVVGLKFLTNMTITNDYQHLLVNSIANFFRLLSQGGGKIKVEILKIL 532
+ LN + + L + + + L + +A K +L++L
Sbjct: 148 L-------LNLSENPAMTEGLLRAQVDSSFLSLYDSHVA-------------KEILLRVL 187
Query: 533 SNFAENPDMLKKLLSTQVPASFSSLYNSYVESEILINALTLFEIIYDNLRAEVFNYREFN 592
+ F + LK +E + + F
Sbjct: 188 TLFQNIKNCLK------------------IEGHLAVQP-------------------TFT 210
Query: 593 KGSLFYLCTTSGVCVKKIRALANHHDLLVKVKVIKLVNK 631
+GSLF+L C +KIRAL +HHD VK KV+ ++ K
Sbjct: 211 EGSLFFL-LHGEECAQKIRALVDHHDAEVKEKVVTIIPK 248
Score = 43.9 bits (102), Expect = 5e-04
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 1 MSRVRDAGCVAAGIVIGAGAWYCVYKYTRGR 31
M R AG VAAG+++GAGA YC+Y+ TRGR
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGR 31
>gi|150378528 G protein-coupled receptor associated sorting protein 1
[Homo sapiens]
Length = 1395
Score = 111 bits (277), Expect = 2e-24
Identities = 60/211 (28%), Positives = 117/211 (55%), Gaps = 1/211 (0%)
Query: 383 LGVRDLRKVLALLQKSDDPFIQQVALLTLSNNANYSCNQETIRKLGGLPIIANMINKTDP 442
+G + ++L L++K DPFI +++ + + + ++ IR G + +I ++N
Sbjct: 1151 IGSEEFEELLLLMEKIRDPFIHEISKIAMGMRSASQFTRDFIRDSGVVSLIETLLNYPSS 1210
Query: 443 HIKEKALMAMNNLSENYENQGRLQVYMNKVMDDIMASNLNSAVQVVGLKFLTNMTITNDY 502
++ L M ++ Y N +Q Y+ KV ++ +A +++S Q+ G++ + ++T T DY
Sbjct: 1211 RVRTSFLENMIRMAPPYPNLNIIQTYICKVCEETLAYSVDSPEQLSGIRMIRHLTTTTDY 1270
Query: 503 QHLLVNSIANFFRLLSQGGGKIKVEILKILSNFAENPDMLKKLLSTQVPASFSSLYNSYV 562
L+ N ++ F LL+ G K + +LK+L N +EN M K+LLS + + F L+N
Sbjct: 1271 HTLVANYMSGFLSLLATGNAKTRFHVLKMLLNLSENLFMTKELLSAEAVSEFIGLFNREE 1330
Query: 563 ESEILINALTLFEIIYDNLRAE-VFNYREFN 592
++ + L +FE I +N++ E VF+ +FN
Sbjct: 1331 TNDNIQIVLAIFENIGNNIKKETVFSDDDFN 1361
>gi|150378489 G protein-coupled receptor associated sorting protein 1
[Homo sapiens]
Length = 1395
Score = 111 bits (277), Expect = 2e-24
Identities = 60/211 (28%), Positives = 117/211 (55%), Gaps = 1/211 (0%)
Query: 383 LGVRDLRKVLALLQKSDDPFIQQVALLTLSNNANYSCNQETIRKLGGLPIIANMINKTDP 442
+G + ++L L++K DPFI +++ + + + ++ IR G + +I ++N
Sbjct: 1151 IGSEEFEELLLLMEKIRDPFIHEISKIAMGMRSASQFTRDFIRDSGVVSLIETLLNYPSS 1210
Query: 443 HIKEKALMAMNNLSENYENQGRLQVYMNKVMDDIMASNLNSAVQVVGLKFLTNMTITNDY 502
++ L M ++ Y N +Q Y+ KV ++ +A +++S Q+ G++ + ++T T DY
Sbjct: 1211 RVRTSFLENMIRMAPPYPNLNIIQTYICKVCEETLAYSVDSPEQLSGIRMIRHLTTTTDY 1270
Query: 503 QHLLVNSIANFFRLLSQGGGKIKVEILKILSNFAENPDMLKKLLSTQVPASFSSLYNSYV 562
L+ N ++ F LL+ G K + +LK+L N +EN M K+LLS + + F L+N
Sbjct: 1271 HTLVANYMSGFLSLLATGNAKTRFHVLKMLLNLSENLFMTKELLSAEAVSEFIGLFNREE 1330
Query: 563 ESEILINALTLFEIIYDNLRAE-VFNYREFN 592
++ + L +FE I +N++ E VF+ +FN
Sbjct: 1331 TNDNIQIVLAIFENIGNNIKKETVFSDDDFN 1361
>gi|103472136 G protein-coupled receptor associated sorting protein 1
[Homo sapiens]
Length = 1395
Score = 111 bits (277), Expect = 2e-24
Identities = 60/211 (28%), Positives = 117/211 (55%), Gaps = 1/211 (0%)
Query: 383 LGVRDLRKVLALLQKSDDPFIQQVALLTLSNNANYSCNQETIRKLGGLPIIANMINKTDP 442
+G + ++L L++K DPFI +++ + + + ++ IR G + +I ++N
Sbjct: 1151 IGSEEFEELLLLMEKIRDPFIHEISKIAMGMRSASQFTRDFIRDSGVVSLIETLLNYPSS 1210
Query: 443 HIKEKALMAMNNLSENYENQGRLQVYMNKVMDDIMASNLNSAVQVVGLKFLTNMTITNDY 502
++ L M ++ Y N +Q Y+ KV ++ +A +++S Q+ G++ + ++T T DY
Sbjct: 1211 RVRTSFLENMIRMAPPYPNLNIIQTYICKVCEETLAYSVDSPEQLSGIRMIRHLTTTTDY 1270
Query: 503 QHLLVNSIANFFRLLSQGGGKIKVEILKILSNFAENPDMLKKLLSTQVPASFSSLYNSYV 562
L+ N ++ F LL+ G K + +LK+L N +EN M K+LLS + + F L+N
Sbjct: 1271 HTLVANYMSGFLSLLATGNAKTRFHVLKMLLNLSENLFMTKELLSAEAVSEFIGLFNREE 1330
Query: 563 ESEILINALTLFEIIYDNLRAE-VFNYREFN 592
++ + L +FE I +N++ E VF+ +FN
Sbjct: 1331 TNDNIQIVLAIFENIGNNIKKETVFSDDDFN 1361
>gi|238776795 SVH protein isoform c [Homo sapiens]
Length = 284
Score = 110 bits (276), Expect = 3e-24
Identities = 94/324 (29%), Positives = 145/324 (44%), Gaps = 79/324 (24%)
Query: 309 MGFRPGDGAAAAAAASANGGQAFLAEVPDSE-EGESGWTDTESDSDSEPETQRRGRGRRP 367
+G R A A ++ G + P + ES W+ T S+PE G
Sbjct: 38 LGIRSSKSAGALEEGTSEGQLCGRSARPQTGGTWESQWSKT-----SQPEDLTDG----- 87
Query: 368 VAMQKRPFPYEIDEILGVRDLRKVLALLQKSDDPFIQQVALLTLSNNANYSCNQETIRKL 427
D++L L+K+L LL+ ++DP I + AL+TL NNA +S NQ IR+L
Sbjct: 88 ----------SYDDVLNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIREL 137
Query: 428 GGLPIIANMINKTDPHIKEKALMAMNNLSENYENQGRLQVYMNKVMDDIMASNLNSAVQV 487
GG+PI+AN IN ++ IKEKAL A+NNLS N ENQ +++V + K++ LN +
Sbjct: 138 GGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKVQVLKLL-------LNLSENP 190
Query: 488 VGLKFLTNMTITNDYQHLLVNSIANFFRLLSQGGGKIKVEILKILSNFAENPDMLKKLLS 547
+ L + + + L + +A K +L++L+ F + LK
Sbjct: 191 AMTEGLLRAQVDSSFLSLYDSHVA-------------KEILLRVLTLFQNIKNCLK---- 233
Query: 548 TQVPASFSSLYNSYVESEILINALTLFEIIYDNLRAEVFNYREFNKGSLFYLCTTSGVCV 607
+E + + F +GSLF+L C
Sbjct: 234 --------------IEGHLAVQP-------------------TFTEGSLFFL-LHGEECA 259
Query: 608 KKIRALANHHDLLVKVKVIKLVNK 631
+KIRAL +HHD VK KV+ ++ K
Sbjct: 260 QKIRALVDHHDAEVKEKVVTIIPK 283
Score = 43.9 bits (102), Expect = 5e-04
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 1 MSRVRDAGCVAAGIVIGAGAWYCVYKYTRGR 31
M R AG VAAG+++GAGA YC+Y+ TRGR
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGR 31
>gi|34147335 armadillo repeat containing, X-linked 6 [Homo sapiens]
Length = 300
Score = 106 bits (264), Expect = 7e-23
Identities = 71/234 (30%), Positives = 123/234 (52%), Gaps = 7/234 (2%)
Query: 336 PDSEEGESGWTDTESDSDSEPETQRRGRGRRPVAMQKRPFPYEIDEILGVRDLRKVLALL 395
P +E+G+ WT+ + +E G+ R +++RPFPYE ++ + +L
Sbjct: 68 PWTEDGD--WTEPGAPGGTEDRPSGGGKANRAHPIKQRPFPYEHKNTWSAQNCKNGSCVL 125
Query: 396 QKSDDPFIQQVALLTLSNNANYSCNQETIRKLGGLPIIANMINKTDPHIKEKALMAMNNL 455
S FIQ L +A + +Q+ L L + N DP ++E AL A +NL
Sbjct: 126 DLSKCLFIQGKLLFAEPKDAGFPFSQDINSHLASLSMARNTSPTPDPTVRE-ALCAPDNL 184
Query: 456 SENYENQGRLQVYMNKVMDDIMASNLNSAVQVVGLKFLTNMTITNDYQHLLVNSIANF-F 514
+ + E+QG++++Y+N+V + ++ NS +Q GL L +MT+ N ++L S ++ F
Sbjct: 185 NASIESQGQIKMYINEVCRETVSRCCNSFLQQAGLNLLISMTVIN---NMLAKSASDLKF 241
Query: 515 RLLSQGGGKIKVEILKILSNFAENPDMLKKLLSTQVPASFSSLYNSYVESEILI 568
L+S+G G KV++LK L +E P + +L+ Q+ SF SL+ EIL+
Sbjct: 242 PLISEGSGCAKVQVLKPLMGLSEKPVLAGELVGAQMLFSFMSLFIRNGNREILL 295
Score = 50.1 bits (118), Expect = 6e-06
Identities = 22/36 (61%), Positives = 28/36 (77%)
Query: 1 MSRVRDAGCVAAGIVIGAGAWYCVYKYTRGRDQTKK 36
M R R+ G +AAG++IGAGA YCVYK T GRD ++K
Sbjct: 1 MGRAREVGWMAAGLMIGAGACYCVYKLTIGRDDSEK 36
>gi|57546906 armadillo repeat containing, X-linked 6 [Homo sapiens]
Length = 300
Score = 106 bits (264), Expect = 7e-23
Identities = 71/234 (30%), Positives = 123/234 (52%), Gaps = 7/234 (2%)
Query: 336 PDSEEGESGWTDTESDSDSEPETQRRGRGRRPVAMQKRPFPYEIDEILGVRDLRKVLALL 395
P +E+G+ WT+ + +E G+ R +++RPFPYE ++ + +L
Sbjct: 68 PWTEDGD--WTEPGAPGGTEDRPSGGGKANRAHPIKQRPFPYEHKNTWSAQNCKNGSCVL 125
Query: 396 QKSDDPFIQQVALLTLSNNANYSCNQETIRKLGGLPIIANMINKTDPHIKEKALMAMNNL 455
S FIQ L +A + +Q+ L L + N DP ++E AL A +NL
Sbjct: 126 DLSKCLFIQGKLLFAEPKDAGFPFSQDINSHLASLSMARNTSPTPDPTVRE-ALCAPDNL 184
Query: 456 SENYENQGRLQVYMNKVMDDIMASNLNSAVQVVGLKFLTNMTITNDYQHLLVNSIANF-F 514
+ + E+QG++++Y+N+V + ++ NS +Q GL L +MT+ N ++L S ++ F
Sbjct: 185 NASIESQGQIKMYINEVCRETVSRCCNSFLQQAGLNLLISMTVIN---NMLAKSASDLKF 241
Query: 515 RLLSQGGGKIKVEILKILSNFAENPDMLKKLLSTQVPASFSSLYNSYVESEILI 568
L+S+G G KV++LK L +E P + +L+ Q+ SF SL+ EIL+
Sbjct: 242 PLISEGSGCAKVQVLKPLMGLSEKPVLAGELVGAQMLFSFMSLFIRNGNREILL 295
Score = 50.1 bits (118), Expect = 6e-06
Identities = 22/36 (61%), Positives = 28/36 (77%)
Query: 1 MSRVRDAGCVAAGIVIGAGAWYCVYKYTRGRDQTKK 36
M R R+ G +AAG++IGAGA YCVYK T GRD ++K
Sbjct: 1 MGRAREVGWMAAGLMIGAGACYCVYKLTIGRDDSEK 36
>gi|51702248 G protein-coupled receptor associated sorting protein 2
[Homo sapiens]
Length = 838
Score = 97.4 bits (241), Expect = 3e-20
Identities = 49/201 (24%), Positives = 109/201 (54%)
Query: 383 LGVRDLRKVLALLQKSDDPFIQQVALLTLSNNANYSCNQETIRKLGGLPIIANMINKTDP 442
+G + + L L+ K DPFI +++ + + + ++ IR G + +I ++N
Sbjct: 593 IGSEEFEEFLLLMDKIRDPFIHEISKIAMGMRSASQFTRDFIRDSGVVSLIETLLNYPSS 652
Query: 443 HIKEKALMAMNNLSENYENQGRLQVYMNKVMDDIMASNLNSAVQVVGLKFLTNMTITNDY 502
++ L M +++ Y N ++ ++ +V ++ +A +++S Q+ G++ L ++T+T DY
Sbjct: 653 RVRTSFLENMIHMAPPYPNLNMIETFICQVCEETLAHSVDSLEQLTGIRMLRHLTMTIDY 712
Query: 503 QHLLVNSIANFFRLLSQGGGKIKVEILKILSNFAENPDMLKKLLSTQVPASFSSLYNSYV 562
L+ N ++ F LL+ + K +LK+L N +ENP + KKL S + + F L+N
Sbjct: 713 HTLIANYMSGFLSLLTTANARTKFHVLKMLLNLSENPAVAKKLFSAKALSIFVGLFNIEE 772
Query: 563 ESEILINALTLFEIIYDNLRA 583
++ + + +F+ I + +++
Sbjct: 773 TNDNIQIVIKMFQNISNIIKS 793
Score = 38.5 bits (88), Expect = 0.019
Identities = 62/283 (21%), Positives = 94/283 (33%), Gaps = 29/283 (10%)
Query: 103 SSAEAQSGAGSQAQEADGAGV--GPKAESVVGAAMASAIAPPPGVTEALGAAEAPAMAGA 160
+ AE + A ++ ++ G V GP+ E+ V + P T+A A +
Sbjct: 2 TGAEIEPSAQAKPEKKAGEEVIAGPERENDV-----PLVVRPKVRTQATTGARPKTETKS 56
Query: 161 PKVAEAPREAETSRAAVPPGTVVPTEAAAPTEVTEGPGVAAPTKVAEAPGVASPTEAAEA 220
A EA+ A P V A P +G A P A A G A A+A
Sbjct: 57 VPAARPKTEAQAMSGARPKTEVQVMGGARPKTEAQGITGARPKTDARAVGGARSKTDAKA 116
Query: 221 PVPATPTGAAAPTGAAESPGTSGSPRTAVVPGTSAAKKATPGAHTGAI--PKATSATGAV 278
A P A +E GT A +A + T A+ P AT+ +G+V
Sbjct: 117 IPGARPKDEAQAWAQSEF-------------GTEAVSQAEGVSQTNAVAWPLATAESGSV 163
Query: 279 PKGGGKGVTRSRNGGKGKGKKSKVEVDELGMGFRPGDGA-------AAAAAASANGGQAF 331
K G + R + + F PG+ + A ++
Sbjct: 164 TKSKGLSMDRELVNVDAETFPGTQGQKGIQPWFGPGEETNMGSWCYSRPRAREEASNESG 223
Query: 332 LAEVPDSEEGESGWTDTESDSDSEPETQRRGRGRRPVAMQKRP 374
++ S WT E+ S P + R R Q P
Sbjct: 224 FWSADETSTASSFWTGEETSVRSWPREESNTRSRHRAKHQTNP 266
Score = 37.0 bits (84), Expect = 0.055
Identities = 53/204 (25%), Positives = 73/204 (35%), Gaps = 25/204 (12%)
Query: 175 AAVPPGTVVPTEAAAPTEVTEGPGVAAPTKVAEAPGVASPTEAAEAPVPATPTGAAAPTG 234
A + P E A EV +A P + + P V P +A TGA T
Sbjct: 4 AEIEPSAQAKPEKKAGEEV-----IAGPERENDVPLVVRPKVRTQA-----TTGARPKTE 53
Query: 235 AAESPGTSGSPRTAVVPGTSAAKKATPGAHTGAIPK--ATSATGAVPKGGGKGVTRSRNG 292
P + P+T + A K GA PK A TGA PK + V
Sbjct: 54 TKSVP--AARPKTEAQAMSGARPKTEVQVMGGARPKTEAQGITGARPKTDARAV------ 105
Query: 293 GKGKGKKSKVEVDELGMGFRPGDGAAAAAAASANGGQAFLAEVPDSEEGESGWTDTESDS 352
G +SK + + G RP D A A A S G +A S+ W ++S
Sbjct: 106 ---GGARSKTDAKAI-PGARPKD-EAQAWAQSEFGTEAVSQAEGVSQTNAVAWPLATAES 160
Query: 353 DSEPETQRRGRGRRPVAMQKRPFP 376
S +++ R V + FP
Sbjct: 161 GSVTKSKGLSMDRELVNVDAETFP 184
Score = 31.6 bits (70), Expect = 2.3
Identities = 51/214 (23%), Positives = 78/214 (36%), Gaps = 32/214 (14%)
Query: 51 ARARAGLRAGFTIDLGSGFSPPTPVRAEAEDRAQDEASALDTVGAEAVAPAA---SSAEA 107
A+A+ +AG + G P+ + R Q A ++V PAA + A+A
Sbjct: 10 AQAKPEKKAGEEVIAGPERENDVPLVVRPKVRTQATTGARPKTETKSV-PAARPKTEAQA 68
Query: 108 QSGAGSQAQEADGAGVGPKAESVVGAAMASAIAPPPGVTEALGAAEAPAMAGAPKVAEAP 167
SGA + + G PK E+ G+T A +A A+ GA
Sbjct: 69 MSGARPKTEVQVMGGARPKTEA-------------QGITGARPKTDARAVGGA------- 108
Query: 168 REAETSRAAVPPGTVVPTEAAAPTEVTEGPGVAAPTKVAEAPGVASPTEAAEAPVPATPT 227
++T A+ PG EA A + G V++A GV S T A P+ +
Sbjct: 109 -RSKTDAKAI-PGARPKDEAQAWAQSEFG-----TEAVSQAEGV-SQTNAVAWPLATAES 160
Query: 228 GAAAPTGAAESPGTSGSPRTAVVPGTSAAKKATP 261
G+ + + PGT K P
Sbjct: 161 GSVTKSKGLSMDRELVNVDAETFPGTQGQKGIQP 194
>gi|19923967 G protein-coupled receptor associated sorting protein 2
[Homo sapiens]
Length = 838
Score = 97.4 bits (241), Expect = 3e-20
Identities = 49/201 (24%), Positives = 109/201 (54%)
Query: 383 LGVRDLRKVLALLQKSDDPFIQQVALLTLSNNANYSCNQETIRKLGGLPIIANMINKTDP 442
+G + + L L+ K DPFI +++ + + + ++ IR G + +I ++N
Sbjct: 593 IGSEEFEEFLLLMDKIRDPFIHEISKIAMGMRSASQFTRDFIRDSGVVSLIETLLNYPSS 652
Query: 443 HIKEKALMAMNNLSENYENQGRLQVYMNKVMDDIMASNLNSAVQVVGLKFLTNMTITNDY 502
++ L M +++ Y N ++ ++ +V ++ +A +++S Q+ G++ L ++T+T DY
Sbjct: 653 RVRTSFLENMIHMAPPYPNLNMIETFICQVCEETLAHSVDSLEQLTGIRMLRHLTMTIDY 712
Query: 503 QHLLVNSIANFFRLLSQGGGKIKVEILKILSNFAENPDMLKKLLSTQVPASFSSLYNSYV 562
L+ N ++ F LL+ + K +LK+L N +ENP + KKL S + + F L+N
Sbjct: 713 HTLIANYMSGFLSLLTTANARTKFHVLKMLLNLSENPAVAKKLFSAKALSIFVGLFNIEE 772
Query: 563 ESEILINALTLFEIIYDNLRA 583
++ + + +F+ I + +++
Sbjct: 773 TNDNIQIVIKMFQNISNIIKS 793
Score = 38.5 bits (88), Expect = 0.019
Identities = 62/283 (21%), Positives = 94/283 (33%), Gaps = 29/283 (10%)
Query: 103 SSAEAQSGAGSQAQEADGAGV--GPKAESVVGAAMASAIAPPPGVTEALGAAEAPAMAGA 160
+ AE + A ++ ++ G V GP+ E+ V + P T+A A +
Sbjct: 2 TGAEIEPSAQAKPEKKAGEEVIAGPERENDV-----PLVVRPKVRTQATTGARPKTETKS 56
Query: 161 PKVAEAPREAETSRAAVPPGTVVPTEAAAPTEVTEGPGVAAPTKVAEAPGVASPTEAAEA 220
A EA+ A P V A P +G A P A A G A A+A
Sbjct: 57 VPAARPKTEAQAMSGARPKTEVQVMGGARPKTEAQGITGARPKTDARAVGGARSKTDAKA 116
Query: 221 PVPATPTGAAAPTGAAESPGTSGSPRTAVVPGTSAAKKATPGAHTGAI--PKATSATGAV 278
A P A +E GT A +A + T A+ P AT+ +G+V
Sbjct: 117 IPGARPKDEAQAWAQSEF-------------GTEAVSQAEGVSQTNAVAWPLATAESGSV 163
Query: 279 PKGGGKGVTRSRNGGKGKGKKSKVEVDELGMGFRPGDGA-------AAAAAASANGGQAF 331
K G + R + + F PG+ + A ++
Sbjct: 164 TKSKGLSMDRELVNVDAETFPGTQGQKGIQPWFGPGEETNMGSWCYSRPRAREEASNESG 223
Query: 332 LAEVPDSEEGESGWTDTESDSDSEPETQRRGRGRRPVAMQKRP 374
++ S WT E+ S P + R R Q P
Sbjct: 224 FWSADETSTASSFWTGEETSVRSWPREESNTRSRHRAKHQTNP 266
Score = 37.0 bits (84), Expect = 0.055
Identities = 53/204 (25%), Positives = 73/204 (35%), Gaps = 25/204 (12%)
Query: 175 AAVPPGTVVPTEAAAPTEVTEGPGVAAPTKVAEAPGVASPTEAAEAPVPATPTGAAAPTG 234
A + P E A EV +A P + + P V P +A TGA T
Sbjct: 4 AEIEPSAQAKPEKKAGEEV-----IAGPERENDVPLVVRPKVRTQA-----TTGARPKTE 53
Query: 235 AAESPGTSGSPRTAVVPGTSAAKKATPGAHTGAIPK--ATSATGAVPKGGGKGVTRSRNG 292
P + P+T + A K GA PK A TGA PK + V
Sbjct: 54 TKSVP--AARPKTEAQAMSGARPKTEVQVMGGARPKTEAQGITGARPKTDARAV------ 105
Query: 293 GKGKGKKSKVEVDELGMGFRPGDGAAAAAAASANGGQAFLAEVPDSEEGESGWTDTESDS 352
G +SK + + G RP D A A A S G +A S+ W ++S
Sbjct: 106 ---GGARSKTDAKAI-PGARPKD-EAQAWAQSEFGTEAVSQAEGVSQTNAVAWPLATAES 160
Query: 353 DSEPETQRRGRGRRPVAMQKRPFP 376
S +++ R V + FP
Sbjct: 161 GSVTKSKGLSMDRELVNVDAETFP 184
Score = 31.6 bits (70), Expect = 2.3
Identities = 51/214 (23%), Positives = 78/214 (36%), Gaps = 32/214 (14%)
Query: 51 ARARAGLRAGFTIDLGSGFSPPTPVRAEAEDRAQDEASALDTVGAEAVAPAA---SSAEA 107
A+A+ +AG + G P+ + R Q A ++V PAA + A+A
Sbjct: 10 AQAKPEKKAGEEVIAGPERENDVPLVVRPKVRTQATTGARPKTETKSV-PAARPKTEAQA 68
Query: 108 QSGAGSQAQEADGAGVGPKAESVVGAAMASAIAPPPGVTEALGAAEAPAMAGAPKVAEAP 167
SGA + + G PK E+ G+T A +A A+ GA
Sbjct: 69 MSGARPKTEVQVMGGARPKTEA-------------QGITGARPKTDARAVGGA------- 108
Query: 168 REAETSRAAVPPGTVVPTEAAAPTEVTEGPGVAAPTKVAEAPGVASPTEAAEAPVPATPT 227
++T A+ PG EA A + G V++A GV S T A P+ +
Sbjct: 109 -RSKTDAKAI-PGARPKDEAQAWAQSEFG-----TEAVSQAEGV-SQTNAVAWPLATAES 160
Query: 228 GAAAPTGAAESPGTSGSPRTAVVPGTSAAKKATP 261
G+ + + PGT K P
Sbjct: 161 GSVTKSKGLSMDRELVNVDAETFPGTQGQKGIQP 194
>gi|238776801 SVH protein isoform f [Homo sapiens]
Length = 225
Score = 97.1 bits (240), Expect = 5e-20
Identities = 52/115 (45%), Positives = 77/115 (66%), Gaps = 5/115 (4%)
Query: 358 TQRRGRGRRPVAMQKRPFPYEI-----DEILGVRDLRKVLALLQKSDDPFIQQVALLTLS 412
T+ R RG R + ++ ++ D++L L+K+L LL+ ++DP I + AL+TL
Sbjct: 28 TRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALITLG 87
Query: 413 NNANYSCNQETIRKLGGLPIIANMINKTDPHIKEKALMAMNNLSENYENQGRLQV 467
NNA +S NQ IR+LGG+PI+AN IN ++ IKEKAL A+NNLS N ENQ +++V
Sbjct: 88 NNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKV 142
Score = 68.6 bits (166), Expect = 2e-11
Identities = 44/117 (37%), Positives = 68/117 (58%), Gaps = 6/117 (5%)
Query: 517 LSQGGGKIKVEILKILSNFAENPDMLKKLLSTQVPASFSSLYNSYVESEILINALTLFEI 576
++ IK + L L+N + N ++ + +V +SF SLY+S+V EIL+ LTLF+
Sbjct: 112 INHSNQSIKEKALNALNNLSVN---VENQIKIKVDSSFLSLYDSHVAKEILLRVLTLFQN 168
Query: 577 IYDNLRAE--VFNYREFNKGSLFYLCTTSGVCVKKIRALANHHDLLVKVKVIKLVNK 631
I + L+ E + F +GSLF+L C +KIRAL +HHD VK KV+ ++ K
Sbjct: 169 IKNCLKIEGHLAVQPTFTEGSLFFL-LHGEECAQKIRALVDHHDAEVKEKVVTIIPK 224
Score = 43.9 bits (102), Expect = 5e-04
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 1 MSRVRDAGCVAAGIVIGAGAWYCVYKYTRGR 31
M R AG VAAG+++GAGA YC+Y+ TRGR
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGR 31
>gi|216547715 basic helix-loop-helix domain containing, class B, 9
[Homo sapiens]
Length = 547
Score = 94.7 bits (234), Expect = 2e-19
Identities = 57/236 (24%), Positives = 128/236 (54%), Gaps = 7/236 (2%)
Query: 353 DSEPETQRRGRGRRPVAMQK----RPF--PYEIDEILGVRDLRKVLALLQKSDDPFIQQV 406
DS+P Q RR + +++ +PF P +++ + + K+++LL+ + DP I ++
Sbjct: 284 DSDPCIQTIDEIRRQIRIREVNGIKPFACPCKMECYMDSEEFEKLVSLLKSTTDPLIHKI 343
Query: 407 ALLTLSNNANYSCNQETIRKLGGLPIIANMINKTDPHIKEKALMAMNNLSENYENQGRLQ 466
A + + + + QE I ++G + +I ++++ P +++K ++ +N S + E Q +++
Sbjct: 344 ARIAMGVHNVHPFAQEFINEVGVVTLIESLLSFPSPEMRKKTVITLNPPSGD-ERQRKIE 402
Query: 467 VYMNKVMDDIMASNLNSAVQVVGLKFLTNMTITNDYQHLLVNSIANFFRLLSQGGGKIKV 526
+++ + + M+ LNS Q GLK L +T + +++ N + F LLS G K +
Sbjct: 403 LHVKHMCKETMSFPLNSPGQQSGLKILGQLTTDFVHHYIVANYFSELFHLLSSGNCKTRN 462
Query: 527 EILKILSNFAENPDMLKKLLSTQVPASFSSLYNSYVESEILINALTLFEIIYDNLR 582
+LK+L N +ENP + +++ + A+ ++N L++ + +F I +++R
Sbjct: 463 LVLKLLLNMSENPTAARDMINMKALAALKLIFNQKEAKANLVSGVAIFINIKEHIR 518
>gi|216547682 basic helix-loop-helix domain containing, class B, 9
[Homo sapiens]
Length = 547
Score = 94.7 bits (234), Expect = 2e-19
Identities = 57/236 (24%), Positives = 128/236 (54%), Gaps = 7/236 (2%)
Query: 353 DSEPETQRRGRGRRPVAMQK----RPF--PYEIDEILGVRDLRKVLALLQKSDDPFIQQV 406
DS+P Q RR + +++ +PF P +++ + + K+++LL+ + DP I ++
Sbjct: 284 DSDPCIQTIDEIRRQIRIREVNGIKPFACPCKMECYMDSEEFEKLVSLLKSTTDPLIHKI 343
Query: 407 ALLTLSNNANYSCNQETIRKLGGLPIIANMINKTDPHIKEKALMAMNNLSENYENQGRLQ 466
A + + + + QE I ++G + +I ++++ P +++K ++ +N S + E Q +++
Sbjct: 344 ARIAMGVHNVHPFAQEFINEVGVVTLIESLLSFPSPEMRKKTVITLNPPSGD-ERQRKIE 402
Query: 467 VYMNKVMDDIMASNLNSAVQVVGLKFLTNMTITNDYQHLLVNSIANFFRLLSQGGGKIKV 526
+++ + + M+ LNS Q GLK L +T + +++ N + F LLS G K +
Sbjct: 403 LHVKHMCKETMSFPLNSPGQQSGLKILGQLTTDFVHHYIVANYFSELFHLLSSGNCKTRN 462
Query: 527 EILKILSNFAENPDMLKKLLSTQVPASFSSLYNSYVESEILINALTLFEIIYDNLR 582
+LK+L N +ENP + +++ + A+ ++N L++ + +F I +++R
Sbjct: 463 LVLKLLLNMSENPTAARDMINMKALAALKLIFNQKEAKANLVSGVAIFINIKEHIR 518
>gi|216547672 basic helix-loop-helix domain containing, class B, 9
[Homo sapiens]
Length = 547
Score = 94.7 bits (234), Expect = 2e-19
Identities = 57/236 (24%), Positives = 128/236 (54%), Gaps = 7/236 (2%)
Query: 353 DSEPETQRRGRGRRPVAMQK----RPF--PYEIDEILGVRDLRKVLALLQKSDDPFIQQV 406
DS+P Q RR + +++ +PF P +++ + + K+++LL+ + DP I ++
Sbjct: 284 DSDPCIQTIDEIRRQIRIREVNGIKPFACPCKMECYMDSEEFEKLVSLLKSTTDPLIHKI 343
Query: 407 ALLTLSNNANYSCNQETIRKLGGLPIIANMINKTDPHIKEKALMAMNNLSENYENQGRLQ 466
A + + + + QE I ++G + +I ++++ P +++K ++ +N S + E Q +++
Sbjct: 344 ARIAMGVHNVHPFAQEFINEVGVVTLIESLLSFPSPEMRKKTVITLNPPSGD-ERQRKIE 402
Query: 467 VYMNKVMDDIMASNLNSAVQVVGLKFLTNMTITNDYQHLLVNSIANFFRLLSQGGGKIKV 526
+++ + + M+ LNS Q GLK L +T + +++ N + F LLS G K +
Sbjct: 403 LHVKHMCKETMSFPLNSPGQQSGLKILGQLTTDFVHHYIVANYFSELFHLLSSGNCKTRN 462
Query: 527 EILKILSNFAENPDMLKKLLSTQVPASFSSLYNSYVESEILINALTLFEIIYDNLR 582
+LK+L N +ENP + +++ + A+ ++N L++ + +F I +++R
Sbjct: 463 LVLKLLLNMSENPTAARDMINMKALAALKLIFNQKEAKANLVSGVAIFINIKEHIR 518
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.128 0.360
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,753,761
Number of Sequences: 37866
Number of extensions: 1351195
Number of successful extensions: 19459
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 312
Number of HSP's successfully gapped in prelim test: 1463
Number of HSP's that attempted gapping in prelim test: 9042
Number of HSP's gapped (non-prelim): 6711
length of query: 632
length of database: 18,247,518
effective HSP length: 108
effective length of query: 524
effective length of database: 14,157,990
effective search space: 7418786760
effective search space used: 7418786760
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.