Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 28557802
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|28557802 sterile alpha motif domain containing 14 [Homo
sapiens]
(445 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|28557802 sterile alpha motif domain containing 14 [Homo sapiens] 897 0.0
gi|93204861 protein phosphatase 1, regulatory (inhibitor) subuni... 134 2e-31
gi|226817313 SH3 and multiple ankyrin repeat domains 2 isoform 1... 51 2e-06
gi|25777596 diacylglycerol kinase, delta 130kDa isoform 1 [Homo ... 46 8e-05
gi|25777598 diacylglycerol kinase, delta 130kDa isoform 2 [Homo ... 46 8e-05
gi|154090976 sterile alpha and TIR motif containing 1 [Homo sapi... 45 2e-04
gi|29788751 diacylglycerol kinase, eta isoform 2 [Homo sapiens] 43 5e-04
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 43 7e-04
gi|41393057 connector enhancer of kinase suppressor of Ras 2 [Ho... 42 9e-04
gi|74316006 CNKSR family member 3 [Homo sapiens] 42 9e-04
gi|58082089 hypothetical protein LOC161394 [Homo sapiens] 42 0.001
gi|31543148 hypothetical protein LOC79173 [Homo sapiens] 42 0.001
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 41 0.002
gi|78042577 MAP7 domain containing 1 [Homo sapiens] 41 0.002
gi|113415504 PREDICTED: similar to ribonucleic acid binding prot... 41 0.003
gi|169166499 PREDICTED: similar to ribonucleic acid binding prot... 41 0.003
gi|113415498 PREDICTED: similar to ribonucleic acid binding prot... 41 0.003
gi|88973230 PREDICTED: similar to ribonucleic acid binding prote... 41 0.003
gi|38787970 tensin like C1 domain containing phosphatase isoform... 40 0.003
gi|38787957 tensin like C1 domain containing phosphatase isoform... 40 0.003
gi|38787941 tensin like C1 domain containing phosphatase isoform... 40 0.003
gi|150417999 ubiquitin-conjugating enzyme E2Z [Homo sapiens] 40 0.004
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 40 0.006
gi|122937241 SH3 and multiple ankyrin repeat domains 3 [Homo sap... 39 0.007
gi|40807452 peroxisome proliferator-activated receptor gamma, co... 39 0.007
gi|56676397 ankyrin repeat domain 11 [Homo sapiens] 39 0.007
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens] 39 0.010
gi|91982772 mucin 17 [Homo sapiens] 39 0.010
gi|7656879 ALL1 fused gene from 5q31 [Homo sapiens] 39 0.010
gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo sa... 39 0.012
>gi|28557802 sterile alpha motif domain containing 14 [Homo sapiens]
Length = 445
Score = 897 bits (2317), Expect = 0.0
Identities = 445/445 (100%), Positives = 445/445 (100%)
Query: 1 MASSKLREPVDEVFDLDLAVPETARLDSSLHKARAQLLAKGRRHRPSRSRLRDSASSAED 60
MASSKLREPVDEVFDLDLAVPETARLDSSLHKARAQLLAKGRRHRPSRSRLRDSASSAED
Sbjct: 1 MASSKLREPVDEVFDLDLAVPETARLDSSLHKARAQLLAKGRRHRPSRSRLRDSASSAED 60
Query: 61 GEGSDGPGGKVTDGCGSPLHRLRSPLHSGPGSPAGGSFCLDPPGLRRSLDEDEPPPSPLT 120
GEGSDGPGGKVTDGCGSPLHRLRSPLHSGPGSPAGGSFCLDPPGLRRSLDEDEPPPSPLT
Sbjct: 61 GEGSDGPGGKVTDGCGSPLHRLRSPLHSGPGSPAGGSFCLDPPGLRRSLDEDEPPPSPLT 120
Query: 121 RYRPLHNAASHEGLAAASCSPPRSAPSSDSSPSFVRRHPRAEPHSEDDSRDASPPEPASP 180
RYRPLHNAASHEGLAAASCSPPRSAPSSDSSPSFVRRHPRAEPHSEDDSRDASPPEPASP
Sbjct: 121 RYRPLHNAASHEGLAAASCSPPRSAPSSDSSPSFVRRHPRAEPHSEDDSRDASPPEPASP 180
Query: 181 TIGLDKKTRRKFLDLGVTLRRASTGKSRKEKGSNRLSMGSRESVEGSGRSGGSPFLPFSW 240
TIGLDKKTRRKFLDLGVTLRRASTGKSRKEKGSNRLSMGSRESVEGSGRSGGSPFLPFSW
Sbjct: 181 TIGLDKKTRRKFLDLGVTLRRASTGKSRKEKGSNRLSMGSRESVEGSGRSGGSPFLPFSW 240
Query: 241 FTDSGKGSASSGSTTSPTCSPKHEGFSPKKSASQAQLLAHAQEALSNSWCLVQDFGSTQI 300
FTDSGKGSASSGSTTSPTCSPKHEGFSPKKSASQAQLLAHAQEALSNSWCLVQDFGSTQI
Sbjct: 241 FTDSGKGSASSGSTTSPTCSPKHEGFSPKKSASQAQLLAHAQEALSNSWCLVQDFGSTQI 300
Query: 301 GMESTLSDDSTPPSSSPKIPSGPWQEAKCSYPYHTLSQSSDEFLDEPLPPVHHWTSQQVG 360
GMESTLSDDSTPPSSSPKIPSGPWQEAKCSYPYHTLSQSSDEFLDEPLPPVHHWTSQQVG
Sbjct: 301 GMESTLSDDSTPPSSSPKIPSGPWQEAKCSYPYHTLSQSSDEFLDEPLPPVHHWTSQQVG 360
Query: 361 QWLQSLNLEQYAAEFAARQVDGPQLLQLDGSKLKSLGLSNSHDRALVKRKLKEMAAAAEK 420
QWLQSLNLEQYAAEFAARQVDGPQLLQLDGSKLKSLGLSNSHDRALVKRKLKEMAAAAEK
Sbjct: 361 QWLQSLNLEQYAAEFAARQVDGPQLLQLDGSKLKSLGLSNSHDRALVKRKLKEMAAAAEK 420
Query: 421 ERKAQEKAARQREKLRRREQEAKKS 445
ERKAQEKAARQREKLRRREQEAKKS
Sbjct: 421 ERKAQEKAARQREKLRRREQEAKKS 445
>gi|93204861 protein phosphatase 1, regulatory (inhibitor) subunit 9A
[Homo sapiens]
Length = 1098
Score = 134 bits (336), Expect = 2e-31
Identities = 88/204 (43%), Positives = 114/204 (55%), Gaps = 24/204 (11%)
Query: 261 PKHEGFSPKKSASQAQLLAHAQEALSNSWCLVQDFGSTQIGMES------TLSDDSTPPS 314
P+ E K ++AQL + + L ST G +S T +DD +P S
Sbjct: 873 PETERLDSKALKTRAQLSVKNRRQRPSRTRLYDSVSSTD-GEDSLERKNFTFNDDFSPSS 931
Query: 315 SSPKIPSGPWQEAKCSYPYHTLSQSSDE--------FLDEPLPPVH---------HWTSQ 357
+S SG E K +L+ SSDE LD+ P H W+ Q
Sbjct: 932 TSSADLSGLGAEPKTPGLSQSLALSSDESLDMIDDEILDDGQSPKHSQCQNRAVQEWSVQ 991
Query: 358 QVGQWLQSLNLEQYAAEFAARQVDGPQLLQLDGSKLKSLGLSNSHDRALVKRKLKEMAAA 417
QV WL SLNLEQY +EF+A+ + G QLLQLDG+KLK+LG++ S DRA+VK+KLKEM +
Sbjct: 992 QVSHWLMSLNLEQYVSEFSAQNITGEQLLQLDGNKLKALGMTASQDRAVVKKKLKEMKMS 1051
Query: 418 AEKERKAQEKAARQREKLRRREQE 441
EK RKAQEK +QREKLRR+EQE
Sbjct: 1052 LEKARKAQEKMEKQREKLRRKEQE 1075
Score = 57.8 bits (138), Expect = 2e-08
Identities = 33/50 (66%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 15 DLDLAVPETARLDSSLHKARAQLLAKGRRHRPSRSRLRDSASSAEDGEGS 64
DL+ AVPET RLDS K RAQL K RR RPSR+RL DS SS DGE S
Sbjct: 867 DLNEAVPETERLDSKALKTRAQLSVKNRRQRPSRTRLYDSVSST-DGEDS 915
>gi|226817313 SH3 and multiple ankyrin repeat domains 2 isoform 1
[Homo sapiens]
Length = 1849
Score = 50.8 bits (120), Expect = 2e-06
Identities = 24/65 (36%), Positives = 35/65 (53%)
Query: 350 PVHHWTSQQVGQWLQSLNLEQYAAEFAARQVDGPQLLQLDGSKLKSLGLSNSHDRALVKR 409
PVH WT V WL+SLNL ++ F ++DG L L L LG++ R ++R
Sbjct: 1782 PVHLWTKPDVADWLESLNLGEHKEAFMDNEIDGSHLPNLQKEDLIDLGVTRVGHRMNIER 1841
Query: 410 KLKEM 414
LK++
Sbjct: 1842 ALKQL 1846
>gi|25777596 diacylglycerol kinase, delta 130kDa isoform 1 [Homo
sapiens]
Length = 1170
Score = 45.8 bits (107), Expect = 8e-05
Identities = 22/69 (31%), Positives = 38/69 (55%)
Query: 350 PVHHWTSQQVGQWLQSLNLEQYAAEFAARQVDGPQLLQLDGSKLKSLGLSNSHDRALVKR 409
PVH W +++V WL+ L+L +Y F + G +LL L+ LK LG++ +
Sbjct: 1097 PVHLWGTEEVAAWLEHLSLCEYKDIFTRHDIRGSELLHLERRDLKDLGVTKVGHMKRILC 1156
Query: 410 KLKEMAAAA 418
+KE++ +A
Sbjct: 1157 GIKELSRSA 1165
>gi|25777598 diacylglycerol kinase, delta 130kDa isoform 2 [Homo
sapiens]
Length = 1214
Score = 45.8 bits (107), Expect = 8e-05
Identities = 22/69 (31%), Positives = 38/69 (55%)
Query: 350 PVHHWTSQQVGQWLQSLNLEQYAAEFAARQVDGPQLLQLDGSKLKSLGLSNSHDRALVKR 409
PVH W +++V WL+ L+L +Y F + G +LL L+ LK LG++ +
Sbjct: 1141 PVHLWGTEEVAAWLEHLSLCEYKDIFTRHDIRGSELLHLERRDLKDLGVTKVGHMKRILC 1200
Query: 410 KLKEMAAAA 418
+KE++ +A
Sbjct: 1201 GIKELSRSA 1209
>gi|154090976 sterile alpha and TIR motif containing 1 [Homo
sapiens]
Length = 724
Score = 44.7 bits (104), Expect = 2e-04
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 348 LPPVHHWTSQQVGQWLQSLNLEQYAAEFAARQVDGPQLLQLDGSKLKS-LGLSNSHDRAL 406
LP V W +V WLQ + +Y F +QVDG LL+L +L++ LG+ + R
Sbjct: 406 LPSVPSWKEAEVQTWLQQIGFSKYCESFREQQVDGDLLLRLTEEELQTDLGMKSGITRKR 465
Query: 407 VKRKLKEMAAAA 418
R+L E+ A
Sbjct: 466 FFRELTELKTFA 477
>gi|29788751 diacylglycerol kinase, eta isoform 2 [Homo sapiens]
Length = 1220
Score = 43.1 bits (100), Expect = 5e-04
Identities = 21/65 (32%), Positives = 33/65 (50%)
Query: 350 PVHHWTSQQVGQWLQSLNLEQYAAEFAARQVDGPQLLQLDGSKLKSLGLSNSHDRALVKR 409
PV W +++V WL LNL +Y F + G +LL L+ LK LG+ + +
Sbjct: 1147 PVQKWGTEEVAAWLDLLNLGEYKDIFIRHDIRGAELLHLERRDLKDLGIPKVGHVKRILQ 1206
Query: 410 KLKEM 414
+KE+
Sbjct: 1207 GIKEL 1211
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 42.7 bits (99), Expect = 7e-04
Identities = 43/164 (26%), Positives = 60/164 (36%), Gaps = 18/164 (10%)
Query: 21 PETARLDSSLHKARAQLLAKGRRHRPSRSRLRDSASSAEDGEGSDGPGGKVTDGCGSPLH 80
P +R SS KA+++ + R S + S + + S P KV G
Sbjct: 794 PRRSRSGSSQPKAKSRTPPRRSRSSSSPPPKQKSKTPSRQSHSSSSPHPKVKSGT----- 848
Query: 81 RLRSPLHSGPGSPAGGSFCLDPPGLRRSLDEDEPPPSPLTRYRPLHNAASHEGLAAASCS 140
P SP + P RRS E P P +R H+ + S +
Sbjct: 849 ---PPRQGSITSPQANEQSVTPQ--RRSCFESSPDPELKSRTPSRHSCSGSSPPRVKSST 903
Query: 141 PPRSAPSSDSSPSFVRR---HPRAEPHSEDDSRDASPPEPASPT 181
PPR +PS SSP + PR HS +S P P+ T
Sbjct: 904 PPRQSPSRSSSPQPKVKAIISPRQRSHS-----GSSSPSPSRVT 942
Score = 40.0 bits (92), Expect = 0.004
Identities = 61/234 (26%), Positives = 85/234 (36%), Gaps = 21/234 (8%)
Query: 39 AKGRRHRPSRSRLRDSASSAEDGEGSDGPGGKVT-DGCGSPLHRLRSPLHSGPGSPAGGS 97
AK RR S S S+SS+ S G + D GS L SP
Sbjct: 2527 AKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPT--- 2583
Query: 98 FCLDPPGLRRSLDEDEPP-PSPLTRYRPLHNAASHEGLAAASCSPPRSAPSSDSSPSFVR 156
P + ++ E PP P+P R R +++S +++S S S+ SS SS S
Sbjct: 2584 -----PAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--- 2635
Query: 157 RHPRAEPHSEDDSRDASPPEPASP-TIGLDKKTRRKFLDLGVTLRRASTGKSRKEKGSNR 215
S S +S P PA P L K K G R+ + S
Sbjct: 2636 -----SSSSSSSSSSSSSPSPAKPGPQALPKPASPKKPPPGERRSRSPRKPIDSLRDSRS 2690
Query: 216 LSMGSRESVEGSGRSGGSPFLPFSWFTDSGKGSASSGSTTSPTCSPKHEGFSPK 269
LS E S + SP S ++ G G + SP+ + E SP+
Sbjct: 2691 LSYSPVERRRPSPQP--SPRDQQSSSSERGSRRGQRGDSRSPSHKRRRETPSPR 2742
Score = 39.7 bits (91), Expect = 0.006
Identities = 55/208 (26%), Positives = 74/208 (35%), Gaps = 65/208 (31%)
Query: 96 GSFCLDPPGLRRSLDEDEPP-------PSPLTRYRPLHNAASHEGLAAASCSPPRSAPSS 148
G + PG+ S D EPP PS L +P S +++S S S+ SS
Sbjct: 2492 GMLSVPAPGVPHS-DVGEPPASTGAQQPSALAALQPAKERRSSSSSSSSSSSSSSSSSSS 2550
Query: 149 DSSPSF-------------------VRRHPRAEPHSEDDSRDASPPEPASPTIGLDKKTR 189
SS S ++R P P ++ R+ PPEP +
Sbjct: 2551 SSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPAPKEAVREGRPPEPTP--------AK 2602
Query: 190 RKFLDLGVTLRRASTGKSRKEKGSNRLSMGSRESVEGSGRSGGSPFLPFSWFTDSGKGSA 249
RK RR+S+ S S+ S S S S S S S+
Sbjct: 2603 RK--------RRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------SSS 2641
Query: 250 SSGSTTSPTCSPKHEG-------FSPKK 270
SS S++SP SP G SPKK
Sbjct: 2642 SSSSSSSP--SPAKPGPQALPKPASPKK 2667
Score = 38.1 bits (87), Expect = 0.016
Identities = 44/159 (27%), Positives = 64/159 (40%), Gaps = 14/159 (8%)
Query: 27 DSSLHKARAQLLAKGRRHRPSRSRLRDSASSAEDGEGS---DGPGGKVTDGCGSPLHRLR 83
D+S ++R+ A + H + + S +S GEG PG T SP +
Sbjct: 273 DTSRSRSRS---AAAKTHTTALAGRSPSPASGRRGEGDAPFSEPGTTSTQRPSSPETATK 329
Query: 84 ---SPLHSGPGSPAGGSFCLDPPGLRRSLDEDEPP-PSPLTRYRPLHNAASHEGLAAASC 139
SP S P RS EPP P+PL R + S + LA
Sbjct: 330 QPSSPYEDKDKDKKEKSATRPSPSPERSSTGPEPPAPTPLLAER---HGGSPQPLATTPL 386
Query: 140 SPPRSAPSSDSSPSFVRRHPRA-EPHSEDDSRDASPPEP 177
S P S++SP+ R P++ E + S ++SPP P
Sbjct: 387 SQEPVNPPSEASPTRDRSPPKSPEKLPQSSSSESSPPSP 425
Score = 37.0 bits (84), Expect = 0.036
Identities = 66/309 (21%), Positives = 102/309 (33%), Gaps = 24/309 (7%)
Query: 37 LLAKGRRHRPSRSRLRDSASSAEDGEGSDGPGGKVTDGCGSPLHRLRSPLHSGPGSPAGG 96
L+ +GR H + R S SS+E S + + + R +
Sbjct: 707 LVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSLSSPR 766
Query: 97 SFCLDPPGLRRSLDEDEPPPSPLTRYRPLHNAASHEGLAAASCSPPRSAPSSDSSPSFVR 156
S LRRSL P P ++ P + + A S +PPR + SS S P +
Sbjct: 767 SKAKSRLSLRRSLSGSSPCPKQKSQTPPRRSRSGSSQPKAKSRTPPRRSRSSSSPPPKQK 826
Query: 157 -RHPRAEPHSEDDS----RDASPPEPASPTIGLDKKTRRKFLDLGVTLRRASTGKSRKEK 211
+ P + HS + +PP S T + + VT +R S +S +
Sbjct: 827 SKTPSRQSHSSSSPHPKVKSGTPPRQGS-------ITSPQANEQSVTPQRRSCFESSPDP 879
Query: 212 GSNRLSMGSRESVEGSGRSGGSPFLPFSWFTDSGKGSASSGSTTSPTCSPKHEGFSPKKS 271
+ SR S GS P S S+S SP+ S S
Sbjct: 880 -ELKSRTPSRHSCSGSSPPRVKSSTP---PRQSPSRSSSPQPKVKAIISPRQRSHSGSSS 935
Query: 272 ASQAQLLAHAQEALSNSWC--------LVQDFGSTQIGMESTLSDDSTPPSSSPKIPSGP 323
S +++ + S S L+ + + T TPP S P
Sbjct: 936 PSPSRVTSRTTPRRSRSVSPCSNVESRLLPRYSHSGSSSPDTKVKPETPPRQSHSGSISP 995
Query: 324 WQEAKCSYP 332
+ + K P
Sbjct: 996 YPKVKAQTP 1004
Score = 35.0 bits (79), Expect = 0.14
Identities = 74/324 (22%), Positives = 109/324 (33%), Gaps = 69/324 (21%)
Query: 81 RLRSPLHSGPGSPAGGSFCLDPPGLRRSLDEDEPPPSPLTRYRPLHNAASHE-------- 132
RLR+ G SF DP RR+ + +P P P Y + ++S
Sbjct: 134 RLRAAFGISDSYVDGSSF--DPQ--RRAREAKQPAPEPPKPYSLVRESSSSRSPTPKQKK 189
Query: 133 -------GLAAASCSPPRSAPSSDS-------SPSFVRRHPRAEPHSEDDSRDASPPEPA 178
G + S SP R S S S R+H P S+ S+D
Sbjct: 190 KKKKKDRGRRSESSSPRRERKKSSKKKKHRSESESKKRKHRSPTPKSKRKSKDKKRKRSR 249
Query: 179 SPTIGLDKKTRRKFLDLGVTLRRAS-TGKSRKEKGSNRL---SMGSRESVEGSGR--SGG 232
S T K+RR +S T +SR + + ++ R SGR G
Sbjct: 250 STTPA--PKSRRAHRSTSADSASSSDTSRSRSRSAAAKTHTTALAGRSPSPASGRRGEGD 307
Query: 233 SPFL-------------------PFSWFTDSGKGSASSGSTTSPTCSPKHEGFSPKKSAS 273
+PF P S + D K S T P+ SP+ P+ A
Sbjct: 308 APFSEPGTTSTQRPSSPETATKQPSSPYEDKDKDKKEK-SATRPSPSPERSSTGPEPPAP 366
Query: 274 QAQLLAHAQEALSNSWCLVQDFGSTQIGME-------STLSDDSTPPSSSPKIPSGPWQE 326
LLA Q +T + E ++ + D +PP S K+P E
Sbjct: 367 -TPLLAERHGGSP------QPLATTPLSQEPVNPPSEASPTRDRSPPKSPEKLPQSSSSE 419
Query: 327 AKCSYPYHT-LSQSSDEFLDEPLP 349
+ P T +S+ + + P P
Sbjct: 420 SSPPSPQPTKVSRHASSSPESPKP 443
Score = 34.7 bits (78), Expect = 0.18
Identities = 66/281 (23%), Positives = 93/281 (33%), Gaps = 41/281 (14%)
Query: 22 ETARLDSSLHKARAQLLAKGRRHRPSRSR---LRDSASSAEDGEGSDGPGGKVTDGCGSP 78
E + +SS+ + G+R R S+ ++ SAS E E P K
Sbjct: 1515 ERSGSESSVDQKTVARTPLGQRSRSGSSQELDVKPSASPQERSESDSSPDSKA------- 1567
Query: 79 LHRLRSPLH----SGPGSPAGGSFCLDPPGLRRSLDEDEPPPSPLTRYRPLHNAASH--- 131
+ R+PL SG L P RRS P R P + S
Sbjct: 1568 --KTRTPLRQRSRSGSSPEVDSKSRLSP---RRSRSGSSPEVKDKPRAAPRAQSGSDSSP 1622
Query: 132 EGLAAASCSPPRSAPSSDSSPSFVRRHPRAEPHSEDDSRDASPPEPASPTIGLDKKTRRK 191
E A A + PR + S SS R P E S +S PP+ + G K
Sbjct: 1623 EPKAPAPRALPRRSRSGSSSKG---RGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEPK 1679
Query: 192 FLDLGVTLRRAS------TGKSRKEKGSNRLSMGSRESVEGSGRSGGSPFLPFSWFTDSG 245
RR+S T K+R + S S R SP + +
Sbjct: 1680 TKSRTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRTPPRHRRSPSVSSPEPAEKS 1739
Query: 246 KGSASSGSTTSP----------TCSPKHEGFSPKKSASQAQ 276
+ S S +SP + SPK G +S S+ +
Sbjct: 1740 RSSRRRRSASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRRE 1780
>gi|41393057 connector enhancer of kinase suppressor of Ras 2 [Homo
sapiens]
Length = 1034
Score = 42.4 bits (98), Expect = 9e-04
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 348 LPPVHHWTSQQVGQWLQSLN--LEQYAAEFAARQVDGPQLLQLDGSKLKSLGLSNSHDRA 405
+ PV W+ QV W++ L+ L+QY F ++ G QLL++ +L+ LG+S +
Sbjct: 5 MEPVSKWSPSQVVDWMKGLDDCLQQYIKNFEREKISGDQLLRITHQELEDLGVSRIGHQE 64
Query: 406 LV 407
L+
Sbjct: 65 LI 66
>gi|74316006 CNKSR family member 3 [Homo sapiens]
Length = 555
Score = 42.4 bits (98), Expect = 9e-04
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 348 LPPVHHWTSQQVGQWLQSLN--LEQYAAEFAARQVDGPQLLQLDGSKLKSLGLSNSHDRA 405
+ PV W+ +QV W + L+ L+QY +F +++G QLLQ+ L+ LG++ +
Sbjct: 1 MEPVTKWSPKQVVDWTRGLDDCLQQYVHKFEREKINGEQLLQISHQDLEELGVTRIGHQE 60
Query: 406 LV 407
LV
Sbjct: 61 LV 62
>gi|58082089 hypothetical protein LOC161394 [Homo sapiens]
Length = 674
Score = 42.0 bits (97), Expect = 0.001
Identities = 17/67 (25%), Positives = 33/67 (49%)
Query: 353 HWTSQQVGQWLQSLNLEQYAAEFAARQVDGPQLLQLDGSKLKSLGLSNSHDRALVKRKLK 412
+W ++V +W+ L QY F + G +L+ ++ S L +G++N D + R +
Sbjct: 544 NWDPEEVAEWISQLGFPQYKECFITNFISGRKLIHVNCSNLPQMGITNFEDMKAISRHTQ 603
Query: 413 EMAAAAE 419
E+ E
Sbjct: 604 ELLEIEE 610
>gi|31543148 hypothetical protein LOC79173 [Homo sapiens]
Length = 637
Score = 41.6 bits (96), Expect = 0.001
Identities = 58/230 (25%), Positives = 86/230 (37%), Gaps = 26/230 (11%)
Query: 17 DLAVPETARLDSSLHKARAQLLAKGRRHRPSRSRLRDSASSAEDGEGSDGPGGKVTDGCG 76
D + PET R+ + +P R ++ + G G PGG +G G
Sbjct: 218 DDSKPETDRVPGDGGQKEHLPSIDSEGEKPDRGAPQEGGAQRTAGAGL--PGGPQEEGDG 275
Query: 77 SPLHRLRSPLHSGPGSPAG-GSFCLDPPGLRRSLDEDEPPPSPLTRYRPLHNAASHEGLA 135
P +P SGP G S+CL+P + + + + PS + R +H L
Sbjct: 276 VPCTPASAPT-SGPAPGLGPASWCLEPGSVAQGSPDPQQTPSRMGR----EGEGTHSSL- 329
Query: 136 AASCSPPRSAPSSDSSPSFVRRHPRAEPHSEDDSRDASPPEPASPTIGLDKKTRRKFLDL 195
CS +D S RA + D + AS PASP R+ L
Sbjct: 330 --GCSSLGMVVIADLSTDPTELEERALEVAGPDGQ-ASAISPASPRRKAADGGHRRALPG 386
Query: 196 GVTLRRASTGKSRK--------------EKGSNRLSMGSRESVEGSGRSG 231
+L +TG+S + S L+ GS ES+ G+G SG
Sbjct: 387 CTSLTGETTGESGEAGQDGKPPGDVLVGPTASLALAPGSGESMMGAGDSG 436
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 41.2 bits (95), Expect = 0.002
Identities = 74/277 (26%), Positives = 100/277 (36%), Gaps = 35/277 (12%)
Query: 90 PGSPAGGSFCLDPPGLRRSLDEDEPPPSPLTRY-------------RPLHNAASHEGLAA 136
P + A G PPG R PP P+T +PL A G A
Sbjct: 17 PAARAPGLLTPRPPGSPR-------PPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGAT 69
Query: 137 ASCSPPRSAPSSDSSPSFVRRHPRAEPHSEDDSRDASPPEPASPTI---GLDKKTRRKFL 193
S PR+ P+ S P R RA P S P AS T L +K R +
Sbjct: 70 IPESAPRAGPTRTSRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLR--I 127
Query: 194 DLGVTLRRASTGKSRKEKGSNRLSMGSRESVEGSGRSGGSPFLPFSWFTDSGKGSASSGS 253
T+ R GK+ + + LS G+R + SG + G+P P G+
Sbjct: 128 SAEETVAR---GKATEAPKRSALSAGARR--DTSGPTPGTP-SPAMARRSRAAGTEVGLP 181
Query: 254 TTSPTCSPKHEGFSPKKSASQAQLLAHAQEALSNSWCLVQDFGSTQIGMESTLSDDSTPP 313
+P+ P+ P+KS S A + E + G Q +LS +TP
Sbjct: 182 RPAPSARPRPPTEGPRKSVSSASEHS-TTEPSPAARRRPSAGGGLQRPASRSLSSSATPL 240
Query: 314 SSSPKIPSGPWQEAKCSYPYHTLSQSSDEFLDEPLPP 350
SS + SGP P H SQ + L PP
Sbjct: 241 SSPAR--SGPSARGTPRAPAHP-SQPKPKGLQALRPP 274
Score = 33.1 bits (74), Expect = 0.52
Identities = 42/129 (32%), Positives = 48/129 (37%), Gaps = 15/129 (11%)
Query: 67 PGGKVTDGCGSP-LHRLRSPLHSGPGSPAGGSFCLDPPGLRRSLDEDEPPP------SPL 119
P + T GSP L S L S P SP PP L + P P SPL
Sbjct: 322 PPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPL 381
Query: 120 TRYRPLHNAASHEGLAAASCSPPRSAP--SSDSSPSFVRRHPRAEPHSEDDSRDASPP-- 175
P A L A SPP S P + S P+ P A P S+ A+PP
Sbjct: 382 ATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQ 441
Query: 176 ----EPASP 180
PASP
Sbjct: 442 VPPSPPASP 450
>gi|78042577 MAP7 domain containing 1 [Homo sapiens]
Length = 841
Score = 41.2 bits (95), Expect = 0.002
Identities = 85/402 (21%), Positives = 141/402 (35%), Gaps = 49/402 (12%)
Query: 47 SRSRLRDSASSAEDGEGSDGPGGKVTDGCGSPLHRLRSPLHSGPGSPAGGSFCLDPPGLR 106
SRS + + + G G D G G+ L R P + P + P
Sbjct: 311 SRSAVTLPRNGRDQGRGCDPGRGPTWGRAGASLARGPQPDRTHPSAAV--------PVCP 362
Query: 107 RSLDEDEPPPSPLTRYRPLHNAASHEGLAAASCSPPRSAPSSDSSPSFVRRHPRAEPHSE 166
RS P +TR S A A R P++ SP+ VRR P A P +
Sbjct: 363 RSASASPLTPCSVTR--------SVHRCAPAGERGERRKPNAGGSPAPVRRRPEASPVQK 414
Query: 167 DDSRDASPPEPASPTIGLDKKTRRKFLDLGVTLRRASTGKSRKEKGSNRLSMGSRESVEG 226
+ +D K R + R S K + S R + + + E
Sbjct: 415 KEKKD---------------KERENEKEKSALARERSLKKRQSLPASPRARLSASTASEL 459
Query: 227 SGRSGGSPFLPF-SWFTDSGKGSASSGSTTSPTCSPKHEGFSPKKSASQAQLLAHAQEAL 285
S +S P P SW + + T P P G +AS + +EA
Sbjct: 460 SPKSKARPSSPSTSWHRPASPCPSPGPGHTLPPKPPSPRG----TTASPKGRVRRKEEAK 515
Query: 286 SNSWCLVQDFGSTQIGMESTLSDDSTP--PSSSPKIPSGPWQEAKCSYPYHTLSQSSDEF 343
+ + S S + + P P+ SP P K P T + ++
Sbjct: 516 ESPSAAGPEDKSQSKRRASNEKESAAPASPAPSPAPSPTPAPPQKEQPPAETPTDAA--V 573
Query: 344 LDEPLPPVHHWTSQQVGQWLQSLNLEQYAAEFAARQVDGPQLLQLDGSKLKSLGLSNSHD 403
L P P T + + + E+ A ++ + + + + + L D
Sbjct: 574 LTSPPAPAPPVTPSK--PMAGTTDREEATRLLAEKRRQAREQREREEQERR---LQAERD 628
Query: 404 RALVKRKL-KEMAAAAEKE---RKAQEKAARQREKLRRREQE 441
+ + + +L +E A AE+E R+ +E+ AR++ + + EQE
Sbjct: 629 KRMREEQLAREAEARAEREAEARRREEQEAREKAQAEQEEQE 670
Score = 32.0 bits (71), Expect = 1.2
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 19/131 (14%)
Query: 311 TPPSSSPKIPSGPWQEAKCSYPYHTLSQSSDEFLDEPLPPVHHWTSQQVGQWLQSLNLEQ 370
TPP+ P+ P + S P T +SD PP T Q+V + + L +
Sbjct: 97 TPPAMGPRDARPP---RRSSQPSPTAVPASDS------PP----TKQEVKKAGERHKLAK 143
Query: 371 YAAEFAARQVDGPQLLQLDGS-KLKSLGLSNSHDRALVKRKLKEMAAAAEKERKAQEKAA 429
E A+ + + + L+ K K+L +R +R+L+E AE+ R A E+
Sbjct: 144 ERREERAKYLAAKKAVWLEKEEKAKALREKQLQER---RRRLEEQRLKAEQRRAALEE-- 198
Query: 430 RQREKLRRREQ 440
RQR+KL + ++
Sbjct: 199 RQRQKLEKNKE 209
>gi|113415504 PREDICTED: similar to ribonucleic acid binding protein
S1 [Homo sapiens]
Length = 305
Score = 40.8 bits (94), Expect = 0.003
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 10/130 (7%)
Query: 147 SSDSSPSFVRRHPRAEPHSEDDSRDASPPEPASPTIGLDKKTRRKFLDLGVTLRRASTG- 205
SS +PS +R R++ S+D S+D + +S KTR++ AS+G
Sbjct: 21 SSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKR--------HSASSGS 72
Query: 206 KSRKEKGSNRLSMGSRESVEGSGRSGGSPFLPFSWFTDSGKGSASSGSTTSPTCS-PKHE 264
S + + S+ S GS S S S S S + + + S+SS S+ SP+ S +H+
Sbjct: 73 SSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHD 132
Query: 265 GFSPKKSASQ 274
+S S+
Sbjct: 133 NRRRSRSKSK 142
>gi|169166499 PREDICTED: similar to ribonucleic acid binding protein
S1 [Homo sapiens]
Length = 305
Score = 40.8 bits (94), Expect = 0.003
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 10/130 (7%)
Query: 147 SSDSSPSFVRRHPRAEPHSEDDSRDASPPEPASPTIGLDKKTRRKFLDLGVTLRRASTG- 205
SS +PS +R R++ S+D S+D + +S KTR++ AS+G
Sbjct: 21 SSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKR--------HSASSGS 72
Query: 206 KSRKEKGSNRLSMGSRESVEGSGRSGGSPFLPFSWFTDSGKGSASSGSTTSPTCS-PKHE 264
S + + S+ S GS S S S S S + + + S+SS S+ SP+ S +H+
Sbjct: 73 SSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHD 132
Query: 265 GFSPKKSASQ 274
+S S+
Sbjct: 133 NRRRSRSKSK 142
>gi|113415498 PREDICTED: similar to ribonucleic acid binding protein
S1 [Homo sapiens]
Length = 305
Score = 40.8 bits (94), Expect = 0.003
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 10/130 (7%)
Query: 147 SSDSSPSFVRRHPRAEPHSEDDSRDASPPEPASPTIGLDKKTRRKFLDLGVTLRRASTG- 205
SS +PS +R R++ S+D S+D + +S KTR++ AS+G
Sbjct: 21 SSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKR--------HSASSGS 72
Query: 206 KSRKEKGSNRLSMGSRESVEGSGRSGGSPFLPFSWFTDSGKGSASSGSTTSPTCS-PKHE 264
S + + S+ S GS S S S S S + + + S+SS S+ SP+ S +H+
Sbjct: 73 SSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHD 132
Query: 265 GFSPKKSASQ 274
+S S+
Sbjct: 133 NRRRSRSKSK 142
>gi|88973230 PREDICTED: similar to ribonucleic acid binding protein
S1 isoform 3 [Homo sapiens]
Length = 305
Score = 40.8 bits (94), Expect = 0.003
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 10/130 (7%)
Query: 147 SSDSSPSFVRRHPRAEPHSEDDSRDASPPEPASPTIGLDKKTRRKFLDLGVTLRRASTG- 205
SS +PS +R R++ S+D S+D + +S KTR++ AS+G
Sbjct: 21 SSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKR--------HSASSGS 72
Query: 206 KSRKEKGSNRLSMGSRESVEGSGRSGGSPFLPFSWFTDSGKGSASSGSTTSPTCS-PKHE 264
S + + S+ S GS S S S S S + + + S+SS S+ SP+ S +H+
Sbjct: 73 SSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHD 132
Query: 265 GFSPKKSASQ 274
+S S+
Sbjct: 133 NRRRSRSKSK 142
>gi|38787970 tensin like C1 domain containing phosphatase isoform 3
[Homo sapiens]
Length = 1285
Score = 40.4 bits (93), Expect = 0.003
Identities = 80/311 (25%), Positives = 103/311 (33%), Gaps = 41/311 (13%)
Query: 69 GKVTDGCGSPLHRLRSPLHSGPGSPAGGSFCLDPPGL--RRSLDEDEPPPSPLTRYRPLH 126
G+V CGSP P G SP GS P R L + P RY
Sbjct: 679 GRVPHSCGSPGEGRGYP-SPGAHSPRAGSISPGSPPYPQSRKLSYEIPTEEGGDRYPLPG 737
Query: 127 NAASHEGLAAASCSPPRSAPSSDSSPSFVRRHPRAEP--HSEDDSRDASPPEPASPTIGL 184
+ AS LA+A P S S S + R PR P S + S ++P +SP G
Sbjct: 738 HLASAGPLASAESLEPVSWREGPSGHSTLPRSPRDAPCSASSELSGPSTPLHTSSPVQGK 797
Query: 185 DKKTRRKFLDLGVTLRRASTGKSRKEKGSNRLSMGSRESVEGSGRSGGSPFLPFSWFTDS 244
+ + RR T +S + RLS G +G +P LP S
Sbjct: 798 E------------STRRQDT-RSPTSAPTQRLSPGEALPPVSQAGTGKAPELP------S 838
Query: 245 GKG-SASSGSTTSPTCSPKHEGFSPKKSASQAQLLAHAQEALSNSWCLVQDFGSTQIGME 303
G G + S SPT P SP + H+ A S G +
Sbjct: 839 GSGPEPLAPSPVSPTFPPS----SPSDWPQERSPGGHSDGASPRSPVPTTLPGLRHAPWQ 894
Query: 304 STLSDDSTP--------PSSSPKIPSGPWQEAKCSYPYHTLSQSSDE--FLDEPLPPVHH 353
+P PS P + + P P L+ S D PLP H
Sbjct: 895 GPRGPPDSPDGSPLTPVPSQMPWLVASPEPPQSSPTPAFPLAASYDTNGLSQPPLPEKRH 954
Query: 354 --WTSQQVGQW 362
QQ G W
Sbjct: 955 LPGPGQQPGPW 965
>gi|38787957 tensin like C1 domain containing phosphatase isoform 2
[Homo sapiens]
Length = 1409
Score = 40.4 bits (93), Expect = 0.003
Identities = 80/311 (25%), Positives = 103/311 (33%), Gaps = 41/311 (13%)
Query: 69 GKVTDGCGSPLHRLRSPLHSGPGSPAGGSFCLDPPGL--RRSLDEDEPPPSPLTRYRPLH 126
G+V CGSP P G SP GS P R L + P RY
Sbjct: 803 GRVPHSCGSPGEGRGYP-SPGAHSPRAGSISPGSPPYPQSRKLSYEIPTEEGGDRYPLPG 861
Query: 127 NAASHEGLAAASCSPPRSAPSSDSSPSFVRRHPRAEP--HSEDDSRDASPPEPASPTIGL 184
+ AS LA+A P S S S + R PR P S + S ++P +SP G
Sbjct: 862 HLASAGPLASAESLEPVSWREGPSGHSTLPRSPRDAPCSASSELSGPSTPLHTSSPVQGK 921
Query: 185 DKKTRRKFLDLGVTLRRASTGKSRKEKGSNRLSMGSRESVEGSGRSGGSPFLPFSWFTDS 244
+ + RR T +S + RLS G +G +P LP S
Sbjct: 922 E------------STRRQDT-RSPTSAPTQRLSPGEALPPVSQAGTGKAPELP------S 962
Query: 245 GKG-SASSGSTTSPTCSPKHEGFSPKKSASQAQLLAHAQEALSNSWCLVQDFGSTQIGME 303
G G + S SPT P SP + H+ A S G +
Sbjct: 963 GSGPEPLAPSPVSPTFPPS----SPSDWPQERSPGGHSDGASPRSPVPTTLPGLRHAPWQ 1018
Query: 304 STLSDDSTP--------PSSSPKIPSGPWQEAKCSYPYHTLSQSSDE--FLDEPLPPVHH 353
+P PS P + + P P L+ S D PLP H
Sbjct: 1019 GPRGPPDSPDGSPLTPVPSQMPWLVASPEPPQSSPTPAFPLAASYDTNGLSQPPLPEKRH 1078
Query: 354 --WTSQQVGQW 362
QQ G W
Sbjct: 1079 LPGPGQQPGPW 1089
>gi|38787941 tensin like C1 domain containing phosphatase isoform 1
[Homo sapiens]
Length = 1419
Score = 40.4 bits (93), Expect = 0.003
Identities = 80/311 (25%), Positives = 103/311 (33%), Gaps = 41/311 (13%)
Query: 69 GKVTDGCGSPLHRLRSPLHSGPGSPAGGSFCLDPPGL--RRSLDEDEPPPSPLTRYRPLH 126
G+V CGSP P G SP GS P R L + P RY
Sbjct: 813 GRVPHSCGSPGEGRGYP-SPGAHSPRAGSISPGSPPYPQSRKLSYEIPTEEGGDRYPLPG 871
Query: 127 NAASHEGLAAASCSPPRSAPSSDSSPSFVRRHPRAEP--HSEDDSRDASPPEPASPTIGL 184
+ AS LA+A P S S S + R PR P S + S ++P +SP G
Sbjct: 872 HLASAGPLASAESLEPVSWREGPSGHSTLPRSPRDAPCSASSELSGPSTPLHTSSPVQGK 931
Query: 185 DKKTRRKFLDLGVTLRRASTGKSRKEKGSNRLSMGSRESVEGSGRSGGSPFLPFSWFTDS 244
+ + RR T +S + RLS G +G +P LP S
Sbjct: 932 E------------STRRQDT-RSPTSAPTQRLSPGEALPPVSQAGTGKAPELP------S 972
Query: 245 GKG-SASSGSTTSPTCSPKHEGFSPKKSASQAQLLAHAQEALSNSWCLVQDFGSTQIGME 303
G G + S SPT P SP + H+ A S G +
Sbjct: 973 GSGPEPLAPSPVSPTFPPS----SPSDWPQERSPGGHSDGASPRSPVPTTLPGLRHAPWQ 1028
Query: 304 STLSDDSTP--------PSSSPKIPSGPWQEAKCSYPYHTLSQSSDE--FLDEPLPPVHH 353
+P PS P + + P P L+ S D PLP H
Sbjct: 1029 GPRGPPDSPDGSPLTPVPSQMPWLVASPEPPQSSPTPAFPLAASYDTNGLSQPPLPEKRH 1088
Query: 354 --WTSQQVGQW 362
QQ G W
Sbjct: 1089 LPGPGQQPGPW 1099
>gi|150417999 ubiquitin-conjugating enzyme E2Z [Homo sapiens]
Length = 354
Score = 40.0 bits (92), Expect = 0.004
Identities = 27/79 (34%), Positives = 33/79 (41%), Gaps = 6/79 (7%)
Query: 212 GSNRLSMGSRESVEGSGRSGGSPFLPFSWFTDSGKGSASS-GSTTSPTCSPKHEGFSPKK 270
G S+ V GSG G PFLP W + G A GS +P G P
Sbjct: 18 GPGASSVAGVVGVSGSGGGFGPPFLPDVWAAAAAAGGAGGPGSGLAPL-----PGLPPSA 72
Query: 271 SASQAQLLAHAQEALSNSW 289
+A A LL+H LS+ W
Sbjct: 73 AAHGAALLSHWDPTLSSDW 91
>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
Length = 2161
Score = 39.7 bits (91), Expect = 0.006
Identities = 20/63 (31%), Positives = 30/63 (47%)
Query: 350 PVHHWTSQQVGQWLQSLNLEQYAAEFAARQVDGPQLLQLDGSKLKSLGLSNSHDRALVKR 409
P+ WT V WL+ L L ++ A+F ++DG L L LG++ R + R
Sbjct: 2094 PLGFWTKFDVADWLEWLGLAEHRAQFLDHEIDGSHLPALTKEDYVDLGVTRVGHRMNIDR 2153
Query: 410 KLK 412
LK
Sbjct: 2154 ALK 2156
Score = 35.0 bits (79), Expect = 0.14
Identities = 38/147 (25%), Positives = 55/147 (37%), Gaps = 25/147 (17%)
Query: 88 SGPGSPAGGSFCLDPPGLRRSLDEDEPPPSPLTRYRP--LHNAASHEGLAAASCSPPRSA 145
S PG+ + G+ PG P +P T+ L +A+S G A S
Sbjct: 452 SAPGAASSGA-----PGPTSGSQGQSQPSAPTTKLSSGTLRSASSPRGARARS------- 499
Query: 146 PSSDSSPSFVRRHPRAEPHSEDDSRDASPPEPASPTIG-------LDKKTRRKFLDLGVT 198
PS P +R PR P S R+ PA T G L + RR+ L V
Sbjct: 500 PSRGRHPEDAKRQPRGRPSSSGTPREG----PAGGTGGSGGPGGSLGSRGRRRKLYSAVP 555
Query: 199 LRRASTGKSRKEKGSNRLSMGSRESVE 225
R KS + + +S+ E ++
Sbjct: 556 GRSFMAVKSYQAQAEGEISLSKGEKIK 582
Score = 33.9 bits (76), Expect = 0.31
Identities = 32/101 (31%), Positives = 40/101 (39%), Gaps = 15/101 (14%)
Query: 83 RSPLHSGPGSPAGGSFCLDPPGLRRSLDEDEPPPSPLTRYRPLHNAASHEGLAAASCSPP 142
R+P+ SG G P+ + PP RRS+ PPSP + A+ GL PP
Sbjct: 1501 RAPVTSGRGPPSEDGPGVPPPSPRRSV-----PPSPTS-----PRASEENGLPLLVLPPP 1550
Query: 143 RSAPSSDSSPS---FVRRHPRAEPHSEDDSRDASPPEPASP 180
APS D FV P S + SP P P
Sbjct: 1551 --APSVDVEDGEFLFVEPLPPPLEFSNSFEKPESPLTPGPP 1589
>gi|122937241 SH3 and multiple ankyrin repeat domains 3 [Homo sapiens]
Length = 1747
Score = 39.3 bits (90), Expect = 0.007
Identities = 17/65 (26%), Positives = 34/65 (52%)
Query: 350 PVHHWTSQQVGQWLQSLNLEQYAAEFAARQVDGPQLLQLDGSKLKSLGLSNSHDRALVKR 409
P+ W+ VG WL+S++L ++ F +++G L L LG++ R ++R
Sbjct: 1680 PLQLWSKFDVGDWLESIHLGEHRDRFEDHEIEGAHLPALTKDDFVELGVTRVGHRMNIER 1739
Query: 410 KLKEM 414
L+++
Sbjct: 1740 ALRQL 1744
Score = 36.2 bits (82), Expect = 0.062
Identities = 63/247 (25%), Positives = 81/247 (32%), Gaps = 29/247 (11%)
Query: 42 RRHRPSRSRLR--DSASSAEDGEGSDGPGGKVTDGCGSPLHRLRSP--LHSGPGSPAGGS 97
RR P +L+ D+ A GS GPGG SP HR P L G G G +
Sbjct: 965 RRKSPLVKQLQVEDAQERAALAVGSPGPGGGSFAREPSPTHRGPRPGGLDYGAGDGPGLA 1024
Query: 98 FCLDPPGLRRSLDEDEPPPSPLTRYRPLHNAASHEGLAAASCSPPRSAPSSDSSPSFVRR 157
F P R L+E R + + EG A P PS S S R
Sbjct: 1025 FGGPGPAKDRRLEERR-------RSTVFLSVGAIEGSA-----PGADLPSLQPSRSIDER 1072
Query: 158 HPRAEPHSEDDSRDASPPEPASPTIGLDKKTRRKFLDLGVTLRRASTGKSRKEKGSNRLS 217
P + D SP P + + G T TGK L+
Sbjct: 1073 LLGTGPTAGRDLLLPSPVSALKPLV-----SGPSLGPSGSTFIHPLTGKPLDPSSPLALA 1127
Query: 218 MGSRESVEGSGRSGGSPF--------LPFSWFTDSGKGSASSGSTTSPTCSPKHEGFSPK 269
+ +RE S SP P F D GS SP SP+ + P
Sbjct: 1128 LAARERALASQAPSRSPTPVHSPDADRPGPLFVDVQARDPERGSLASPAFSPRSPAWIPV 1187
Query: 270 KSASQAQ 276
+ +A+
Sbjct: 1188 PARREAE 1194
>gi|40807452 peroxisome proliferator-activated receptor gamma,
coactivator-related 1 [Homo sapiens]
Length = 1664
Score = 39.3 bits (90), Expect = 0.007
Identities = 47/207 (22%), Positives = 80/207 (38%), Gaps = 42/207 (20%)
Query: 114 PPPSPLTRYRPL-HNAASHEGLAAASCSPPRSAPSSDSSPSFVRRHPRAEPHSEDDSRDA 172
PPP PL H +S + +A C P S S ++SP +D
Sbjct: 1343 PPPCIAASREPLDHRTSSEQADPSAPCLAPSSLLSPEASP------------CRNDMNTR 1390
Query: 173 SPPEPASPTIGLDKKTRRKFLDLGVTLRRASTG-KSRKEKGSNRLSMGSRESVEGSGRSG 231
+PPEP++ +++ R + + +S G + R+ + S +S GS + E S
Sbjct: 1391 TPPEPSA-----KQRSMRCYRKACRSASPSSQGWQGRRGRNSRSVSSGSNRTSEAS---- 1441
Query: 232 GSPFLPFSWFTDSGKGSASSGSTTSPTCSPKHEGFSPKKSASQAQLLAHAQEALSNSWCL 291
S S+SS + S + SP H+ + +S + + + S+S
Sbjct: 1442 -----------SSSSSSSSSSRSRSRSLSPPHKRWRRSSCSSSGRSRRCSSSSSSSS--- 1487
Query: 292 VQDFGSTQIGMESTLSDDSTPPSSSPK 318
S+ S+ S S S SP+
Sbjct: 1488 -----SSSSSSSSSSSSRSRSRSPSPR 1509
>gi|56676397 ankyrin repeat domain 11 [Homo sapiens]
Length = 2663
Score = 39.3 bits (90), Expect = 0.007
Identities = 50/180 (27%), Positives = 66/180 (36%), Gaps = 56/180 (31%)
Query: 31 HKARAQLLAKGRRHRPSRSRLRDSASSAEDG--EGSDGPGGKVTDGCGSPLHRLRSPLHS 88
HK R + + K RHR +L++ A A+DG +G D P K
Sbjct: 1601 HKERMKQMEK-LRHRSGDPKLKEKAKPADDGRKKGLDIPAKK------------------ 1641
Query: 89 GPGSPAGGSFCLDPPGLRRSLDEDEP-PPSPLTRYRPLHNAASHEGLAA--------ASC 139
P G LDPP + L E P PP+ + P A S + LA AS
Sbjct: 1642 ----PPG----LDPPFKDKKLKESTPIPPAAENKLHPASGADSKDWLAGPHMKEVLPASP 1693
Query: 140 SPPRSAPSSDSSPSF---------VRRHPRAEPHSEDDSRDA---------SPPEPASPT 181
P +S P+ +P+ V PR S DD D S P P +PT
Sbjct: 1694 RPDQSRPTGVPTPTSVLSCPSYEEVMHTPRTPSCSADDYADLVFDCADSQHSTPVPTAPT 1753
Score = 33.9 bits (76), Expect = 0.31
Identities = 81/364 (22%), Positives = 135/364 (37%), Gaps = 95/364 (26%)
Query: 171 DASPPEPASPTIGLDKKTRRKFLDL--GVTLRRASTGKSRKEKG---------------- 212
D S E AS T+G +K R + G R S K +KEK
Sbjct: 409 DTSDEEDASVTVGTGEKLRLSAHTILPGSKTREPSNAKQQKEKNKVKKKRKKETKGREVR 468
Query: 213 ----------------SNRLSMGSRESVEGSGRSGGSPFL---PFSWFTDSGKGSASSGS 253
S+ R+S+ SG GSP + P + + S ++S GS
Sbjct: 469 FGKRSDKFCSSESESESSESGEDDRDSLGSSGCLKGSPLVLKDPSLFSSLSASSTSSHGS 528
Query: 254 TTSPTCSPKHEGFSPK--KSASQAQLLAHAQEALSNSWCLVQDFGSTQIGMESTLSDDST 311
+ + +P H K ++ + + + A +S+ + D T++ ES S + +
Sbjct: 529 SAAQKQNPSHTDQHTKHWRTDNWKTISSPAWSEVSS----LSDSTRTRLTSESDYSSEGS 584
Query: 312 PPSSSPKIPSGPWQEAKCSY-----PYHTLSQSSDEFLDEPLPPV------HHWTSQQVG 360
S + + S P+ + ++ + LD+ V H +++ G
Sbjct: 585 SVESLKPVRKRQEHRKRASLSEKKSPFLSSAEGAVPKLDKEGKVVKKHKTKHKHKNKEKG 644
Query: 361 QWL--QSLNLEQYAAEF--AARQVDGPQLLQLDGS---KLKSLGLSNSH---DRALVKRK 410
Q Q L L+ + E+ + ++ D LL+ D S KLK L H + L K K
Sbjct: 645 QCSISQELKLKSFTYEYEDSKQKSDKAILLENDLSTENKLKVLKHDRDHFKKEEKLSKMK 704
Query: 411 L------------------------------KEMAAAAEKERKAQEKAARQREKLRRREQ 440
L K+ + AEKER +EK+ ++ EKLR ++
Sbjct: 705 LEEKEWLFKDEKSLKRIKDTNKDISRSFREEKDRSNKAEKERSLKEKSPKE-EKLRLYKE 763
Query: 441 EAKK 444
E KK
Sbjct: 764 ERKK 767
>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
Length = 2400
Score = 38.9 bits (89), Expect = 0.010
Identities = 66/299 (22%), Positives = 100/299 (33%), Gaps = 37/299 (12%)
Query: 46 PSRSRLRDSASSAEDGEGSDGPGGKVTDGCGSPLHRLRSPLHSGPGSPAGGSFCLDPP-- 103
P ++R S A +G P ++ L G G + +P
Sbjct: 556 PGKARAETSQQEASEGGDPASPALSLSSLRSDDLQA--ETQGQGTEQATGAAVTREPLVL 613
Query: 104 GLRRSLDEDEPPPSPLTRYRPLHNAASHEGLAAASCSPPRSAPSSDSSPSFVRRHPRAEP 163
GL S D + +P T H A+A SP SSP R PR P
Sbjct: 614 GLSCSWDSEGASSTPSTCTSSQQGQRRHRSRASAMSSP--------SSPGLGRVAPRGHP 665
Query: 164 HSEDDSRDASPPEPASPTIGLDK-KTRRKFLDLGVTLRRASTGKSRKEKGSNRLSMGSRE 222
+D P +S T + + RR+ G R + + S + + S L S
Sbjct: 666 RHSHYRKDTHSPLDSSVTKQVPRPPERRRACQDGSVPRYSGSSSSTRTQASGNLRPPSSG 725
Query: 223 SVEGSGRSGGSPFLPFSWFTDSGKGSASSGSTTSPTCSPKHEGFSPKKSASQAQLLAHAQ 282
S+ G S + T + SG + S G + ++ S A + H
Sbjct: 726 SLPSQDLLGTSS----ATVTPAVHSDFVSGVSPHNAPSAGWAGDAGSRTCSPAPIPPHTS 781
Query: 283 EALSNSWCLVQDFGSTQIGMESTLSDDSTPPSSSPKI---------PSGPWQEAKCSYP 332
++ S S G+ +G E+ TP SSP + GP + CS P
Sbjct: 782 DSCSKS-------GAASLGEEAR----DTPQPSSPLVLQVGRPEQGAVGPHRSHCCSQP 829
Score = 31.6 bits (70), Expect = 1.5
Identities = 33/120 (27%), Positives = 47/120 (39%), Gaps = 18/120 (15%)
Query: 126 HNAASHEGLAAASCSPPRSAPSSDSSPSFVRRHPRAEPHSEDDSRDASPPEPASPTIGLD 185
H A E + S SP SS P P + +D D++ P S IG +
Sbjct: 440 HGTAGRERCSQDSASPA----SSTGLPEGSEPESSCCPRTPEDGVDSASP---SAQIGAE 492
Query: 186 KKTRRKF-LDLGVTLRRASTG----------KSRKEKGSNRLSMGSRESVEGSGRSGGSP 234
+K D G+ + A G ++R E+G++ S S S EGS GG P
Sbjct: 493 RKAGGSLGEDPGLCIDGAGLGGPEQGGRLTPRARSEEGASSDSSASTGSHEGSSEWGGRP 552
Score = 31.6 bits (70), Expect = 1.5
Identities = 51/273 (18%), Positives = 99/273 (36%), Gaps = 45/273 (16%)
Query: 196 GVTLRRASTGKSRKEKGSNRLSMGSRES----VEGSGRSGGSPFLPFSWFTDSGKGSASS 251
G + + GK+ + S +G E + G +GG S D+ +G A++
Sbjct: 1765 GDAMAQEREGKTHNSETSAGSELGEAEQEGEGISERGETGGQG----SGHEDNLQGEAAA 1820
Query: 252 GSTTSPTCSPKHEGFSPKKSASQAQLLAHAQEALSNSWCLVQDFGSTQIGMEST----LS 307
G P S EG ++ +AQ + EA + G Q E
Sbjct: 1821 GGDQDPGQSDGAEGIEAPEAEGEAQPESEGVEAPEAEGDAQEAEGEAQPESEDVEAPEAE 1880
Query: 308 DDSTPPSSSPKIPSGPWQ-------------EAKCSYPYHTLSQSSDEFLDEPLPPVHHW 354
++ P S + P W+ E + ++ E DEP
Sbjct: 1881 GEAQPESEDVETPEAEWEVQPESEGAEAPEAEKEAQPETESVEALETEGEDEP------- 1933
Query: 355 TSQQVGQWLQSLNLEQYAAEFAARQVDG---PQLLQLDGSKLKSLGLSNSHDRALVKRKL 411
+S E AE AA++ +G P+ ++ + + S D ++ ++
Sbjct: 1934 ---------ESEGAEAQEAEEAAQEAEGQTQPESEVIESQEAEEEAQPESEDVEALEVEV 1984
Query: 412 KEMAAAAEKERKAQEKAARQRE-KLRRREQEAK 443
+ A E + ++++ A + E +++ E+EA+
Sbjct: 1985 ETQEAEGEAQPESEDVEAPEAEGEMQEAEEEAQ 2017
>gi|91982772 mucin 17 [Homo sapiens]
Length = 4493
Score = 38.9 bits (89), Expect = 0.010
Identities = 59/243 (24%), Positives = 95/243 (39%), Gaps = 22/243 (9%)
Query: 134 LAAASCSPPRSAPSSDSSPSFVRRHPRAEPHSEDDS--RDASPPEPASPTIGLDKKTRRK 191
+ ++ S + P S+P+ + P + + + ++P E +P G+ T
Sbjct: 1997 VVSSEASTLSTTPVDTSTPATTSTEGSSSPTTAGGTSIQTSTPSERTTPLAGMPVSTTLV 2056
Query: 192 FLDLGVTLRRASTGKSRKEKGSNRLSMGSRESVEGSGR-----SGGSPFL---PFSWFTD 243
G TL ++T K + +N S + EGS S GSP L P S T
Sbjct: 2057 VSSEGNTL--STTPVDSKTQVTNSTEASSSATAEGSSMTISAPSEGSPLLTSIPLST-TP 2113
Query: 244 SGKGSASSGSTT-----SPTCSPKHEGFSP---KKSASQAQLLAHAQEALSNSWCLVQDF 295
AS+ STT SP + SP + ++ Q + + L++
Sbjct: 2114 VASPEASTLSTTPVDSNSPVITSTEVSSSPIPTEGTSMQTSTYSDRRTPLTSMPVSTTVV 2173
Query: 296 GSTQIGMESTLS-DDSTPPSSSPKIPSGPWQEAKCSYPYHTLSQSSDEFLDEPLPPVHHW 354
S+ I ST D STP ++S + S P S P T S+ S F P+ +
Sbjct: 2174 ASSAISTLSTTPVDTSTPVTNSTEARSSPTTSEGTSMPTSTPSEGSTPFTSMPVSTMPVV 2233
Query: 355 TSQ 357
TS+
Sbjct: 2234 TSE 2236
Score = 35.0 bits (79), Expect = 0.14
Identities = 59/296 (19%), Positives = 112/296 (37%), Gaps = 27/296 (9%)
Query: 55 ASSAEDGEGSDGPGGKVTDGCGSPLHRLRSPLHSGPGSPAGGSFCLDPPGLRRSLDEDEP 114
A+++ +G S G + +P R +PL G P + + G S +
Sbjct: 2016 ATTSTEGSSSPTTAGGTSIQTSTPSERT-TPL---AGMPVSTTLVVSSEGNTLSTTPVDS 2071
Query: 115 PPSPLTRYRPLHNAASHEGLAAASCSPPRSAPSSDSSPSFVRRHPRAEPHSEDDSRDASP 174
+ +T ++A+ EG + +P +P S P + P A P E + +P
Sbjct: 2072 K-TQVTNSTEASSSATAEGSSMTISAPSEGSPLLTSIP--LSTTPVASP--EASTLSTTP 2126
Query: 175 PEPASPTIGLDKKTRRKFLDLGVTLRRASTGKSRKEKGSNRLS--MGSRESVEGSGRSGG 232
+ SP I + + G +++ ++ R S +S + + ++ +
Sbjct: 2127 VDSNSPVITSTEVSSSPIPTEGTSMQTSTYSDRRTPLTSMPVSTTVVASSAISTLSTTPV 2186
Query: 233 SPFLPFSWFTDSGKGSASSGSTTSPTCSPKHEGFSPKKSASQAQLLAHAQEALSNSWCLV 292
P + T++ +S T+ PT +P EG +P S + + EA +
Sbjct: 2187 DTSTPVTNSTEARSSPTTSEGTSMPTSTPS-EGSTPFTSMPVSTMPVVTSEAST------ 2239
Query: 293 QDFGSTQIGMESTLSDDSTPPSSSPKIPSGPWQEAKCSYPYHTLSQSSDEFLDEPL 348
+ +T D STP ++S + S P S P TLS+ + P+
Sbjct: 2240 ---------LSATPVDTSTPVTTSTEATSSPTTAEGTSIPTSTLSEGTTPLTSIPV 2286
Score = 31.2 bits (69), Expect = 2.0
Identities = 46/227 (20%), Positives = 88/227 (38%), Gaps = 24/227 (10%)
Query: 117 SPLTRYRPLHNAASHEGLAAASCSPPRSAPSSDSSP-SFVRRHPRAEPHSEDDSRDASPP 175
+P+T H++ + + S P S PS S+P +++ SED + A+P
Sbjct: 3134 TPVTTSTEAHSSPT----TSEGTSMPTSTPSEGSTPLTYMPVSTMLVVSSEDSTLSATPV 3189
Query: 176 EPASPTIGLDKKTRRKFLDLGVTLRRASTGKSRKEKGSNRLSMGSRESVEGS--GRSGGS 233
+ ++P + T + G ++ ++ + S +S S E S +
Sbjct: 3190 DTSTPVTTSTEATSSTTAE-GTSIPTSTPSEGMTPLTSVPVSNTPVASSEASILSTTPVD 3248
Query: 234 PFLPFSWFTDSGKGSASSGSTTSPTCSPKHEGFSPKKSASQAQLLAHAQEALSNSWCLVQ 293
P + T++ ++ T+ PT +P EG +P S + + E +
Sbjct: 3249 SNTPLTTSTEASSSPPTAEGTSMPTSTPS-EGSTPLTSMPVSTTTVASSETST------- 3300
Query: 294 DFGSTQIGMESTLSDDSTPPSSSPKIPSGPWQEAKCSYPYHTLSQSS 340
+ +T +D STP ++ + S P S P T S+ S
Sbjct: 3301 --------LSTTPADTSTPVTTYSQASSSPPIADGTSMPTSTYSEGS 3339
Score = 29.6 bits (65), Expect = 5.8
Identities = 49/222 (22%), Positives = 79/222 (35%), Gaps = 14/222 (6%)
Query: 129 ASHEGLAAASCSPPRSAPSSDSSPSFVRRHPRAEPHSEDDSRDASPPEPASPTIGLDKKT 188
AS S P S PS S+P S + S ++ P ++ + +
Sbjct: 548 ASSSSTTPEGTSIPTSTPSEGSTPLTNMPVSTRLVVSSEASTTSTTPADSNTFVTTSSEA 607
Query: 189 RRKFLDLGVTLRRASTGKSRKEKGSNRLSMGSRESVEGSGRSGG------SPFLPFSWFT 242
T ST E+G+ SM ++ S + P + T
Sbjct: 608 SSSSTTAEGTSMPTST---YSERGTTITSMSVSTTLVASSEASTLSTTPVDSNTPVTTST 664
Query: 243 DSGKGSASSGSTTSPTCSPKHEGFSPKKSASQAQLLAHAQEALSNSWCLVQDFG----ST 298
++ S ++ T+ PT S EG +P S L + EA + S V ST
Sbjct: 665 EATSSSTTAEGTSMPT-STYTEGSTPLTSMPVNTTLVASSEASTLSTTPVDTSTPVTTST 723
Query: 299 QIGMESTLSDDSTPPSSSPKIPSGPWQEAKCSYPYHTLSQSS 340
+ T +D ++ P+S+P S P S T S++S
Sbjct: 724 EASSSPTTADGASMPTSTPSEGSTPLTSMPVSKTLLTSSEAS 765
Score = 28.9 bits (63), Expect = 9.9
Identities = 45/224 (20%), Positives = 83/224 (37%), Gaps = 22/224 (9%)
Query: 127 NAASHEGLAAASCSPPRSAPSSDSSPSFVRRHPRAEPHSEDDSRDASPPEPASPTIGLDK 186
++ + EG + +P +P S P V P A P E + +P + SP I +
Sbjct: 1612 SSTTAEGSSMTISTPSEGSPLLTSIP--VSTTPVASP--EASTLSTTPVDSNSPVITSTE 1667
Query: 187 KTRRKFLDLGVTLRRASTGKSRKEKGSN--RLSMGSRESVEGSGRSGGSPFLPFSWFTDS 244
+ G ++ ++ + R S R + + ++ + P + T++
Sbjct: 1668 VSSSPTPAEGTSMPTSTYTEGRTPLTSITVRTTPVASSAISTLSTTPVDNSTPVTTSTEA 1727
Query: 245 GKGSASSGSTTSPTCSPKHEGFSPKKSASQAQLLAHAQEALSNSWCLVQDFGSTQIGMES 304
+S T+ P +P EG +P S + + EA + + +
Sbjct: 1728 RSSPTTSEGTSMPNSTPS-EGTTPLTSIPVSTTPVLSSEAST---------------LSA 1771
Query: 305 TLSDDSTPPSSSPKIPSGPWQEAKCSYPYHTLSQSSDEFLDEPL 348
T D STP ++S + S P S P TLS+ P+
Sbjct: 1772 TPIDTSTPVTTSTEATSSPTTAEGTSIPTSTLSEGMTPLTSTPV 1815
Score = 28.9 bits (63), Expect = 9.9
Identities = 49/238 (20%), Positives = 88/238 (36%), Gaps = 23/238 (9%)
Query: 117 SPLTRYRPLHNAASHEGLAAAS--CSPPRSAPSSDSSPSFVRRHPRAEP--HSEDDSRDA 172
+P+ P+ N+ S S P S PS S+P F P SE + A
Sbjct: 2184 TPVDTSTPVTNSTEARSSPTTSEGTSMPTSTPSEGSTP-FTSMPVSTMPVVTSEASTLSA 2242
Query: 173 SPPEPASPTIGLDKKTRRKFLDLGVTLRRASTGKSRKEKGSNRLS--MGSRESVEGSGRS 230
+P + ++P + T G ++ ++ + S +S + + V +
Sbjct: 2243 TPVDTSTPVTTSTEATSSPTTAEGTSIPTSTLSEGTTPLTSIPVSHTLVANSEVSTLSTT 2302
Query: 231 GGSPFLPFSWFTDSGKGSASSGSTTSPTCSPKHEGFSPKKSASQAQLLAHAQEALSNSWC 290
PF+ T++ ++ T+ PT S EG +P + S
Sbjct: 2303 PVDSNTPFTTSTEASSPPPTAEGTSMPT-STSSEGNTPLTR-------------MPVSTT 2348
Query: 291 LVQDFGSTQIGMESTLSDDSTPPSSSPKIPSGPWQEAKCSYPYHTLSQSSDEFLDEPL 348
+V F ++ + +T +D STP ++ + S P S P T S+ S P+
Sbjct: 2349 MVASFETSTLS--TTPADTSTPVTTYSQAGSSPTTADDTSMPTSTYSEGSTPLTSVPV 2404
>gi|7656879 ALL1 fused gene from 5q31 [Homo sapiens]
Length = 1163
Score = 38.9 bits (89), Expect = 0.010
Identities = 68/309 (22%), Positives = 116/309 (37%), Gaps = 50/309 (16%)
Query: 47 SRSRLRDSA--SSAEDGEGS---DGPGGKVTDGCGS-PLH---------RLRSPLHSGPG 91
S+S L+D SS+ED +G D + T G S P H R S HSG
Sbjct: 376 SKSMLKDDLKLSSSEDSDGEQDCDKTMPRSTPGSNSEPSHHNSEGADNSRDDSSSHSGSE 435
Query: 92 SPAGGSFCLDPPGLRRSLDED------EPPPSPLTRYRP---LHNAASHEGLAAASCSPP 142
S +G + +E EP P P +++ L+ H+ SP
Sbjct: 436 SSSGSDSESESSSSDSEANEPSQSASPEPEPPPTNKWQLDNWLNKVNPHK------VSPA 489
Query: 143 RSAPSSDSSPSFVRRHPRAEPHSEDDSRDASPPEPASPTIGLDKKTRRKFLDLG------ 196
S S+ S ++ R + + + P E +S T G D KT +K + G
Sbjct: 490 SSVDSNIPSSQGYKKEGREQGTGNSYTDTSGPKETSSATPGRDSKTIQKGSESGRGRQKS 549
Query: 197 -----VTLRRASTGKSRKEKGSNRLSMGSRESVEGSGRSGGSPFLPFSWFTDSGKGSASS 251
T +R + GK + +K + E G + + + S + A++
Sbjct: 550 PAQSDSTTQRRTVGKKQPKKAEK----AAAEEPRGGLKIESETPVDLASSMPSSRHKAAT 605
Query: 252 GSTTSPTCSPKHEGFSPKKSASQAQLLAHAQEALSNSWCLVQDFGSTQIGMESTLSDDST 311
+ P K SP+ +A + + + ++ + + + D S+ +S S+
Sbjct: 606 KGSRKPNIK-KESKSSPRPTAEKKKYKSTSKSSQKSREIIETDTSSS----DSDESESLP 660
Query: 312 PPSSSPKIP 320
P S +PK P
Sbjct: 661 PSSQTPKYP 669
>gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo
sapiens]
Length = 699
Score = 38.5 bits (88), Expect = 0.012
Identities = 48/208 (23%), Positives = 77/208 (37%), Gaps = 22/208 (10%)
Query: 37 LLAKGRRHRPSRSRLRDSAS------SAEDGEGSDGPGGKVTDGCGSPLHRLRSPL---H 87
+++K P + +S+S S+ED E P G + P +SP
Sbjct: 344 VVSKATTKPPPAKKAAESSSDSSDSDSSEDDEAPSKPAGTTKNSSNKPAVTTKSPAVKPA 403
Query: 88 SGPGSPAGGSFCLDPPGLRRSLDEDEPPPSPLTRYRPLHNAASHEGLAAASCSPPRSAPS 147
+ P P GG L S E+E S + + + A+ P +A +
Sbjct: 404 AAPKQPVGGGQKLLTRKADSSSSEEESSSSEEEKTKKM----------VATTKPKATAKA 453
Query: 148 SDSSPSFVRRHPRAEPHSEDDSRDASPPEPASPTI-GLDKKTRRKFLDLGVTLRRASTGK 206
+ S P+ ++ P+ S DS +S E T KK +K + AS K
Sbjct: 454 ALSLPA--KQAPQGSRDSSSDSDSSSSEEEEEKTSKSAVKKKPQKVAGGAAPSKPASAKK 511
Query: 207 SRKEKGSNRLSMGSRESVEGSGRSGGSP 234
+ E ++ S S E E + GSP
Sbjct: 512 GKAESSNSSSSDDSSEEEEEKLKGKGSP 539
Score = 32.3 bits (72), Expect = 0.89
Identities = 52/244 (21%), Positives = 88/244 (36%), Gaps = 65/244 (26%)
Query: 38 LAKGRRHRPSRSRLRDSASSAEDGEGSDGPGGKVTDGCGSPLHRLRSPLHSGPGSPAGGS 97
+AK + + S S DS S+E+ E GP K P R+ P PG A +
Sbjct: 74 VAKKAKKKASSS---DSEDSSEEEEEVQGPPAKKA---AVPAKRVGLP----PGKAAAKA 123
Query: 98 FCLDPPGLRRSLDEDEPPPSPLTRYRPLHNAASHEGLAAASCSPPRSAPSSDSSPSFVRR 157
+ S D+D+ + +P+ + AA + PP+ A SSDS
Sbjct: 124 S--ESSSSEESSDDDDEEDQ---KKQPVQKGVKPQAKAAKA--PPKKAKSSDS------- 169
Query: 158 HPRAEPHSEDDSRDASPPEPASPTIGLDKKTRRKFLDLGVTLRRASTGKSRKEKGSNRLS 217
D S + PP+ P I VT++ + + + + +++
Sbjct: 170 -------DSDSSSEDEPPKNQKPKI------------TPVTVKAQTKAPPKPARAAPKIA 210
Query: 218 MGSRESVEGSGRSGGSPFLPFSWFTDSGKGSASSGSTTSPTCSPKHEGFSPKKSASQAQL 277
G S S+SS S++S + +PKK+ + Q+
Sbjct: 211 NGKAAS----------------------SSSSSSSSSSSDDSEEEKAAATPKKTVPKKQV 248
Query: 278 LAHA 281
+A A
Sbjct: 249 VAKA 252
Score = 31.2 bits (69), Expect = 2.0
Identities = 73/329 (22%), Positives = 114/329 (34%), Gaps = 54/329 (16%)
Query: 108 SLDEDEPPPSPLTRYRPLHNAASHEGLAAASCSPPRSAPSSDSSPSFVRRHPRAEPHSED 167
S EDEPP + + P+ A A P R+AP + + + S D
Sbjct: 173 SSSEDEPPKNQKPKITPVTVKAQ----TKAPPKPARAAPKIANGKAASSSSSSSSSSSSD 228
Query: 168 DSRDASPPEPASPTIGLDKKTRRKFLDLGVTLRRASTGKSRKEKGSNRLSMGSRESVEGS 227
DS + E A+ T KKT K + +A+T +RK S S E +
Sbjct: 229 DSEE----EKAAAT---PKKTVPKKQVVAKAPVKAATTPTRKSSSSEDSSSDEEEEQKKP 281
Query: 228 GRSGGSPFLPFSWFTDSGKGSASSGSTTSPTCSP--KHEGFSPKKSASQAQLLAHAQEAL 285
++ P+ S P+ P K G P K A + Q + E
Sbjct: 282 MKNKPGPY----------------SSVPPPSAPPPKKSLGTQPPKKAVEKQQPVESSEDS 325
Query: 286 SNSWCLVQDFGSTQIGMESTLSDDSTPPSSS--PKIPSGPWQEAKCSYPYHTLSQSSDEF 343
S+ +S+ ++ PP+ + K + P AK + + S SD
Sbjct: 326 SDE-------------SDSSSEEEKKPPTKAVVSKATTKP-PPAKKAAESSSDSSDSDSS 371
Query: 344 LDEPLPPVHHWTSQQVGQWLQSLNLEQYAAEF-AARQVDGPQLLQLDGSKL--KSLGLSN 400
D+ P S+ G S N + A + P+ G KL + S+
Sbjct: 372 EDDEAP------SKPAGTTKNSSNKPAVTTKSPAVKPAAAPKQPVGGGQKLLTRKADSSS 425
Query: 401 SHDRALVKRKLKEMAAAAEKERKAQEKAA 429
S + + + K A + KA KAA
Sbjct: 426 SEEESSSSEEEKTKKMVATTKPKATAKAA 454
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.309 0.126 0.368
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,144,549
Number of Sequences: 37866
Number of extensions: 1276168
Number of successful extensions: 9176
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 141
Number of HSP's successfully gapped in prelim test: 539
Number of HSP's that attempted gapping in prelim test: 7289
Number of HSP's gapped (non-prelim): 2327
length of query: 445
length of database: 18,247,518
effective HSP length: 105
effective length of query: 340
effective length of database: 14,271,588
effective search space: 4852339920
effective search space used: 4852339920
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.