Guide to the Human Genome
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Search of human proteins with 27881499

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|27881499 solute carrier family 35, member C2 isoform a [Homo
sapiens]
         (365 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|27881499 solute carrier family 35, member C2 isoform a [Homo ...   712   0.0  
gi|21314776 solute carrier family 35, member C2 isoform a [Homo ...   712   0.0  
gi|27881496 solute carrier family 35, member C2 isoform b [Homo ...   662   0.0  
gi|160707905 similar to solute carrier family 35, member E2 [Hom...    69   9e-12
gi|56699411 solute carrier family 35, member E2 [Homo sapiens]         58   1e-08
gi|223671915 GDP-fucose transporter 1 isoform a [Homo sapiens]         57   3e-08
gi|223671919 GDP-fucose transporter 1 isoform b [Homo sapiens]         57   3e-08
gi|223671917 GDP-fucose transporter 1 isoform b [Homo sapiens]         57   3e-08
gi|223029426 solute carrier family 35, member D2 [Homo sapiens]        55   8e-08
gi|164607128 solute carrier family 35, member E1 [Homo sapiens]        54   3e-07
gi|189027121 solute carrier family 35, member F1 [Homo sapiens]        43   4e-04
gi|14028875 solute carrier family 35 (UDP-glucuronic acid/UDP-N-...    42   9e-04
gi|5032213 solute carrier family 35, member B1 [Homo sapiens]          38   0.012
gi|14249528 solute carrier family 35, member B4 [Homo sapiens]         37   0.036
gi|122937311 solute carrier family 35, member F4 [Homo sapiens]        37   0.036
gi|38708299 solute carrier family 29 (nucleoside transporters), ...    30   3.4  
gi|21450850 olfactory receptor, family 12, subfamily D, member 2...    30   4.4  
gi|40254891 hypothetical protein FLJ20674 [Homo sapiens]               29   7.6  
gi|116517323 olfactory receptor, family 4, subfamily C, member 1...    29   7.6  
gi|157739932 mesogenin 1 [Homo sapiens]                                28   9.9  
gi|4507545 G protein-coupled receptor 137B [Homo sapiens]              28   9.9  

>gi|27881499 solute carrier family 35, member C2 isoform a [Homo
           sapiens]
          Length = 365

 Score =  712 bits (1838), Expect = 0.0
 Identities = 365/365 (100%), Positives = 365/365 (100%)

Query: 1   MGRWALDVAFLWKAVLTLGLVLLYYCFSIGITFYNKWLTKSFHFPLFMTMLHLAVIFLFS 60
           MGRWALDVAFLWKAVLTLGLVLLYYCFSIGITFYNKWLTKSFHFPLFMTMLHLAVIFLFS
Sbjct: 1   MGRWALDVAFLWKAVLTLGLVLLYYCFSIGITFYNKWLTKSFHFPLFMTMLHLAVIFLFS 60

Query: 61  ALSRALVQCSSHRARVVLSWADYLRRVAPTALATALDVGLSNWSFLYVTVSLYTMTKSSA 120
           ALSRALVQCSSHRARVVLSWADYLRRVAPTALATALDVGLSNWSFLYVTVSLYTMTKSSA
Sbjct: 61  ALSRALVQCSSHRARVVLSWADYLRRVAPTALATALDVGLSNWSFLYVTVSLYTMTKSSA 120

Query: 121 VLFILIFSLIFKLEELRAALVLVVLLIAGGLFMFTYKSTQFNVEGFALVLGASFIGGIRW 180
           VLFILIFSLIFKLEELRAALVLVVLLIAGGLFMFTYKSTQFNVEGFALVLGASFIGGIRW
Sbjct: 121 VLFILIFSLIFKLEELRAALVLVVLLIAGGLFMFTYKSTQFNVEGFALVLGASFIGGIRW 180

Query: 181 TLTQMLLQKAELGLQNPIDTMFHLQPLMFLGLFPLFAVFEGLHLSTSEKIFRFQDTGLLL 240
           TLTQMLLQKAELGLQNPIDTMFHLQPLMFLGLFPLFAVFEGLHLSTSEKIFRFQDTGLLL
Sbjct: 181 TLTQMLLQKAELGLQNPIDTMFHLQPLMFLGLFPLFAVFEGLHLSTSEKIFRFQDTGLLL 240

Query: 241 RVLGSLFLGGILAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLLAAHLLGDQISLLNW 300
           RVLGSLFLGGILAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLLAAHLLGDQISLLNW
Sbjct: 241 RVLGSLFLGGILAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLLAAHLLGDQISLLNW 300

Query: 301 LGFALCLSGISLHVALKALHSRGDGGPKALKGLGSSPDLELLLRSSQREEGDNEEEEYFV 360
           LGFALCLSGISLHVALKALHSRGDGGPKALKGLGSSPDLELLLRSSQREEGDNEEEEYFV
Sbjct: 301 LGFALCLSGISLHVALKALHSRGDGGPKALKGLGSSPDLELLLRSSQREEGDNEEEEYFV 360

Query: 361 AQGQQ 365
           AQGQQ
Sbjct: 361 AQGQQ 365


>gi|21314776 solute carrier family 35, member C2 isoform a [Homo
           sapiens]
          Length = 365

 Score =  712 bits (1838), Expect = 0.0
 Identities = 365/365 (100%), Positives = 365/365 (100%)

Query: 1   MGRWALDVAFLWKAVLTLGLVLLYYCFSIGITFYNKWLTKSFHFPLFMTMLHLAVIFLFS 60
           MGRWALDVAFLWKAVLTLGLVLLYYCFSIGITFYNKWLTKSFHFPLFMTMLHLAVIFLFS
Sbjct: 1   MGRWALDVAFLWKAVLTLGLVLLYYCFSIGITFYNKWLTKSFHFPLFMTMLHLAVIFLFS 60

Query: 61  ALSRALVQCSSHRARVVLSWADYLRRVAPTALATALDVGLSNWSFLYVTVSLYTMTKSSA 120
           ALSRALVQCSSHRARVVLSWADYLRRVAPTALATALDVGLSNWSFLYVTVSLYTMTKSSA
Sbjct: 61  ALSRALVQCSSHRARVVLSWADYLRRVAPTALATALDVGLSNWSFLYVTVSLYTMTKSSA 120

Query: 121 VLFILIFSLIFKLEELRAALVLVVLLIAGGLFMFTYKSTQFNVEGFALVLGASFIGGIRW 180
           VLFILIFSLIFKLEELRAALVLVVLLIAGGLFMFTYKSTQFNVEGFALVLGASFIGGIRW
Sbjct: 121 VLFILIFSLIFKLEELRAALVLVVLLIAGGLFMFTYKSTQFNVEGFALVLGASFIGGIRW 180

Query: 181 TLTQMLLQKAELGLQNPIDTMFHLQPLMFLGLFPLFAVFEGLHLSTSEKIFRFQDTGLLL 240
           TLTQMLLQKAELGLQNPIDTMFHLQPLMFLGLFPLFAVFEGLHLSTSEKIFRFQDTGLLL
Sbjct: 181 TLTQMLLQKAELGLQNPIDTMFHLQPLMFLGLFPLFAVFEGLHLSTSEKIFRFQDTGLLL 240

Query: 241 RVLGSLFLGGILAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLLAAHLLGDQISLLNW 300
           RVLGSLFLGGILAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLLAAHLLGDQISLLNW
Sbjct: 241 RVLGSLFLGGILAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLLAAHLLGDQISLLNW 300

Query: 301 LGFALCLSGISLHVALKALHSRGDGGPKALKGLGSSPDLELLLRSSQREEGDNEEEEYFV 360
           LGFALCLSGISLHVALKALHSRGDGGPKALKGLGSSPDLELLLRSSQREEGDNEEEEYFV
Sbjct: 301 LGFALCLSGISLHVALKALHSRGDGGPKALKGLGSSPDLELLLRSSQREEGDNEEEEYFV 360

Query: 361 AQGQQ 365
           AQGQQ
Sbjct: 361 AQGQQ 365


>gi|27881496 solute carrier family 35, member C2 isoform b [Homo
           sapiens]
          Length = 344

 Score =  662 bits (1707), Expect = 0.0
 Identities = 344/365 (94%), Positives = 344/365 (94%), Gaps = 21/365 (5%)

Query: 1   MGRWALDVAFLWKAVLTLGLVLLYYCFSIGITFYNKWLTKSFHFPLFMTMLHLAVIFLFS 60
           MGRWALDVAFLWKAVLTLGLVLLYYCFSIGITFYNKWLTKSFHFPLFMTMLHLAVIFLFS
Sbjct: 1   MGRWALDVAFLWKAVLTLGLVLLYYCFSIGITFYNKWLTKSFHFPLFMTMLHLAVIFLFS 60

Query: 61  ALSRALVQCSSHRARVVLSWADYLRRVAPTALATALDVGLSNWSFLYVTVSLYTMTKSSA 120
           ALSRALVQCSSHRARVVLSWADYLRRVAPTALATALDVGLSNWSFLYVTVSLYTMTKSSA
Sbjct: 61  ALSRALVQCSSHRARVVLSWADYLRRVAPTALATALDVGLSNWSFLYVTVSLYTMTKSSA 120

Query: 121 VLFILIFSLIFKLEELRAALVLVVLLIAGGLFMFTYKSTQFNVEGFALVLGASFIGGIRW 180
           VLFILIFSLIFKLEEL                     STQFNVEGFALVLGASFIGGIRW
Sbjct: 121 VLFILIFSLIFKLEEL---------------------STQFNVEGFALVLGASFIGGIRW 159

Query: 181 TLTQMLLQKAELGLQNPIDTMFHLQPLMFLGLFPLFAVFEGLHLSTSEKIFRFQDTGLLL 240
           TLTQMLLQKAELGLQNPIDTMFHLQPLMFLGLFPLFAVFEGLHLSTSEKIFRFQDTGLLL
Sbjct: 160 TLTQMLLQKAELGLQNPIDTMFHLQPLMFLGLFPLFAVFEGLHLSTSEKIFRFQDTGLLL 219

Query: 241 RVLGSLFLGGILAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLLAAHLLGDQISLLNW 300
           RVLGSLFLGGILAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLLAAHLLGDQISLLNW
Sbjct: 220 RVLGSLFLGGILAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLLAAHLLGDQISLLNW 279

Query: 301 LGFALCLSGISLHVALKALHSRGDGGPKALKGLGSSPDLELLLRSSQREEGDNEEEEYFV 360
           LGFALCLSGISLHVALKALHSRGDGGPKALKGLGSSPDLELLLRSSQREEGDNEEEEYFV
Sbjct: 280 LGFALCLSGISLHVALKALHSRGDGGPKALKGLGSSPDLELLLRSSQREEGDNEEEEYFV 339

Query: 361 AQGQQ 365
           AQGQQ
Sbjct: 340 AQGQQ 344


>gi|160707905 similar to solute carrier family 35, member E2 [Homo
           sapiens]
          Length = 405

 Score = 68.6 bits (166), Expect = 9e-12
 Identities = 93/356 (26%), Positives = 148/356 (41%), Gaps = 39/356 (10%)

Query: 11  LWKAVLTLGLVLLYYCFSIGITFYNKWLTKSFHFPLFMT----MLHLAVIFLFSALSRAL 66
           +W +   L L L ++ FS    F NK++         M     ML   VI       + L
Sbjct: 70  VWSSRALLYLTLWFF-FSFCTLFLNKYILSLLGGEPSMLGAVQMLSTTVI----GCVKTL 124

Query: 67  VQCSSHRARVVLSWADYLRRVAPTALATALDVGLSNW--------SFLYVTVSLYTMTKS 118
           V C  ++ +  LS+        P  L T L VGL  +        S   V VS     KS
Sbjct: 125 VPCCLYQHKARLSYP-------PNFLMTMLFVGLMRFATVVLGLVSLKNVAVSFAETVKS 177

Query: 119 SAVLFILIFSLIFKLEELRAALVLVVLLIAGGLFMFTYKSTQFNVEGFALVLGASFIGGI 178
           SA +F +I S +   E     + L ++ + GGL + T     FNV GF+  L  + +  +
Sbjct: 178 SAPIFTVIMSRMILGEYTGLLVNLSLIPVMGGLALCTATEISFNVLGFSAALSTNIMDCL 237

Query: 179 RWTLTQMLLQKAELGLQNPIDTMFHLQPLMFLGLFPLFAVFEGLH-LSTSEKIFRF-QDT 236
           +   ++ LL   +     P +  F+        L P    F  +  +  S K F + QD 
Sbjct: 238 QNVFSKKLLSGDKYRFSAP-ELQFYTSAAAVAMLVPARVFFTDVPVIGRSGKSFSYNQDV 296

Query: 237 GLLLRVLGSLF-LGGILAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLLAAHLLGDQI 295
            LLL   G LF L  + A+        L+ + S +T S+A   K   ++ L+  + G++I
Sbjct: 297 VLLLLTDGVLFHLQSVTAYA-------LMGKISPVTFSVASTVKHALSIWLSVIVFGNKI 349

Query: 296 SLLNWLGFALCLSGISLHVALKALHSRGDGGPKALKGLGSSPD--LELLLRSSQRE 349
           + L+ +G AL   G+ L+   KA   + +         G +PD  +E LL    R+
Sbjct: 350 TSLSAVGTALVTVGVLLY--NKARQHQQEALQSLAAATGRAPDDTVEPLLPQDPRQ 403


>gi|56699411 solute carrier family 35, member E2 [Homo sapiens]
          Length = 313

 Score = 58.2 bits (139), Expect = 1e-08
 Identities = 74/304 (24%), Positives = 123/304 (40%), Gaps = 32/304 (10%)

Query: 28  SIGITFYNKWLTKSFHFP-LFMTMLHLAVIFLFSALSRAL---VQCSSHRARVVLSWADY 83
           SI I F NKW+     FP + +T++H  V +L   + + L      S   +R++L     
Sbjct: 25  SICIVFLNKWIYVYHGFPNMSLTLVHFVVTWLGLYICQKLDIFAPKSLPPSRLLL----- 79

Query: 84  LRRVAPTALATALDVGLSNWSFLYVTVSLYTMTKSSAVLFILIFSLIFKLEELRAALVLV 143
                  AL+    V  +N S    T+  Y + K+     I+        +     + L 
Sbjct: 80  ------LALSFCGFVVFTNLSLQNNTIGTYQLAKAMTTPVIIAIQTFCYQKTFSTRIQLT 133

Query: 144 VLLIAGGLFMFTYKSTQFNVEGFALVLGASFIGGIRWTLTQMLLQKAELGLQ-NPIDTMF 202
           ++ I  G+ + +Y   +FN  G       + +G +  +L Q+ +   +  LQ N +  ++
Sbjct: 134 LIPITLGVILNSYYDVKFNFLGMVF----AALGVLVTSLYQVWVGAKQHELQVNSMQLLY 189

Query: 203 HLQPL---MFLGLFPLFAVFEGLHLSTSEKIFRFQDTGLLLRVLGSLFLGGILAFGLGFS 259
           +  P+   M L   P F    G        IF       LL VL    L G++AF +  S
Sbjct: 190 YQAPMSSAMLLVAVPFFEPVFG-----EGGIFGPWSVSALLMVL----LSGVIAFMVNLS 240

Query: 260 EFLLVSRTSSLTLSIAGIFKEVCTLLLAAHLLGDQISLLNWLGFALCLSGISLHVALKAL 319
            + ++  TS +T ++ G FK   TL     L  D +S+   LG    L GI  +   K  
Sbjct: 241 IYWIIGNTSPVTYNMFGHFKFCITLFGGYVLFKDPLSINQALGILCTLFGILAYTHFKLS 300

Query: 320 HSRG 323
              G
Sbjct: 301 EQEG 304


>gi|223671915 GDP-fucose transporter 1 isoform a [Homo sapiens]
          Length = 364

 Score = 57.0 bits (136), Expect = 3e-08
 Identities = 75/321 (23%), Positives = 122/321 (38%), Gaps = 34/321 (10%)

Query: 10  FLWKAVLTLGLVLLYYCFSIGITFYNKWLTKS----FHFPLFMTMLHLAVIFLFSALSRA 65
           FL +A+    +V LY+  SI + F NK+L  S       P+F+T     V  L      A
Sbjct: 34  FLLRALQIALVVSLYWVTSISMVFLNKYLLDSPSLRLDTPIFVTFYQCLVTTLLCKGLSA 93

Query: 66  LVQCSSHRARVVLSWADY--LRRVAPTALATALDVGLSNWSFLYVTVSLYTMTKSSAVLF 123
           L  C            D    R V P ++     +  +N    YV V+ Y + +S   +F
Sbjct: 94  LAACCPGAVDFPSLRLDLRVARSVLPLSVVFIGMITFNNLCLKYVGVAFYNVGRSLTTVF 153

Query: 124 ILIFSLIFKLEELRAALVLVVLLIAGGLFMFTYKSTQFNVEGFALVLGASF--IGGIRWT 181
            ++ S +   +      +L   +I GG ++      Q   EG    LG  F  +  +  +
Sbjct: 154 NVLLSYLLLKQTTSFYALLTCGIIIGGFWLGV---DQEGAEGTLSWLGTVFGVLASLCVS 210

Query: 182 LTQMLLQKA---------ELGLQNPIDTMFHLQPLMFLGLFPLFAVFEGLHLSTSEKIFR 232
           L  +   K           L   N ++      PL+ L L  L A+ +   L ++     
Sbjct: 211 LNAIYTTKVLPAVDGSIWRLTFYNNVNACILFLPLLLL-LGELQALRDFAQLGSAH---- 265

Query: 233 FQDTGLLLRVLGSLFLGGILAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLLAAHLLG 292
                      G + LGG+  F +G+   L +  TS LT +++G  K     +LA     
Sbjct: 266 ---------FWGMMTLGGLFGFAIGYVTGLQIKFTSPLTHNVSGTAKACAQTVLAVLYYE 316

Query: 293 DQISLLNWLGFALCLSGISLH 313
           +  S L W    + L G S +
Sbjct: 317 ETKSFLWWTSNMMVLGGSSAY 337


>gi|223671919 GDP-fucose transporter 1 isoform b [Homo sapiens]
          Length = 351

 Score = 57.0 bits (136), Expect = 3e-08
 Identities = 75/321 (23%), Positives = 122/321 (38%), Gaps = 34/321 (10%)

Query: 10  FLWKAVLTLGLVLLYYCFSIGITFYNKWLTKS----FHFPLFMTMLHLAVIFLFSALSRA 65
           FL +A+    +V LY+  SI + F NK+L  S       P+F+T     V  L      A
Sbjct: 21  FLLRALQIALVVSLYWVTSISMVFLNKYLLDSPSLRLDTPIFVTFYQCLVTTLLCKGLSA 80

Query: 66  LVQCSSHRARVVLSWADY--LRRVAPTALATALDVGLSNWSFLYVTVSLYTMTKSSAVLF 123
           L  C            D    R V P ++     +  +N    YV V+ Y + +S   +F
Sbjct: 81  LAACCPGAVDFPSLRLDLRVARSVLPLSVVFIGMITFNNLCLKYVGVAFYNVGRSLTTVF 140

Query: 124 ILIFSLIFKLEELRAALVLVVLLIAGGLFMFTYKSTQFNVEGFALVLGASF--IGGIRWT 181
            ++ S +   +      +L   +I GG ++      Q   EG    LG  F  +  +  +
Sbjct: 141 NVLLSYLLLKQTTSFYALLTCGIIIGGFWLGV---DQEGAEGTLSWLGTVFGVLASLCVS 197

Query: 182 LTQMLLQKA---------ELGLQNPIDTMFHLQPLMFLGLFPLFAVFEGLHLSTSEKIFR 232
           L  +   K           L   N ++      PL+ L L  L A+ +   L ++     
Sbjct: 198 LNAIYTTKVLPAVDGSIWRLTFYNNVNACILFLPLLLL-LGELQALRDFAQLGSAH---- 252

Query: 233 FQDTGLLLRVLGSLFLGGILAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLLAAHLLG 292
                      G + LGG+  F +G+   L +  TS LT +++G  K     +LA     
Sbjct: 253 ---------FWGMMTLGGLFGFAIGYVTGLQIKFTSPLTHNVSGTAKACAQTVLAVLYYE 303

Query: 293 DQISLLNWLGFALCLSGISLH 313
           +  S L W    + L G S +
Sbjct: 304 ETKSFLWWTSNMMVLGGSSAY 324


>gi|223671917 GDP-fucose transporter 1 isoform b [Homo sapiens]
          Length = 351

 Score = 57.0 bits (136), Expect = 3e-08
 Identities = 75/321 (23%), Positives = 122/321 (38%), Gaps = 34/321 (10%)

Query: 10  FLWKAVLTLGLVLLYYCFSIGITFYNKWLTKS----FHFPLFMTMLHLAVIFLFSALSRA 65
           FL +A+    +V LY+  SI + F NK+L  S       P+F+T     V  L      A
Sbjct: 21  FLLRALQIALVVSLYWVTSISMVFLNKYLLDSPSLRLDTPIFVTFYQCLVTTLLCKGLSA 80

Query: 66  LVQCSSHRARVVLSWADY--LRRVAPTALATALDVGLSNWSFLYVTVSLYTMTKSSAVLF 123
           L  C            D    R V P ++     +  +N    YV V+ Y + +S   +F
Sbjct: 81  LAACCPGAVDFPSLRLDLRVARSVLPLSVVFIGMITFNNLCLKYVGVAFYNVGRSLTTVF 140

Query: 124 ILIFSLIFKLEELRAALVLVVLLIAGGLFMFTYKSTQFNVEGFALVLGASF--IGGIRWT 181
            ++ S +   +      +L   +I GG ++      Q   EG    LG  F  +  +  +
Sbjct: 141 NVLLSYLLLKQTTSFYALLTCGIIIGGFWLGV---DQEGAEGTLSWLGTVFGVLASLCVS 197

Query: 182 LTQMLLQKA---------ELGLQNPIDTMFHLQPLMFLGLFPLFAVFEGLHLSTSEKIFR 232
           L  +   K           L   N ++      PL+ L L  L A+ +   L ++     
Sbjct: 198 LNAIYTTKVLPAVDGSIWRLTFYNNVNACILFLPLLLL-LGELQALRDFAQLGSAH---- 252

Query: 233 FQDTGLLLRVLGSLFLGGILAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLLAAHLLG 292
                      G + LGG+  F +G+   L +  TS LT +++G  K     +LA     
Sbjct: 253 ---------FWGMMTLGGLFGFAIGYVTGLQIKFTSPLTHNVSGTAKACAQTVLAVLYYE 303

Query: 293 DQISLLNWLGFALCLSGISLH 313
           +  S L W    + L G S +
Sbjct: 304 ETKSFLWWTSNMMVLGGSSAY 324


>gi|223029426 solute carrier family 35, member D2 [Homo sapiens]
          Length = 337

 Score = 55.5 bits (132), Expect = 8e-08
 Identities = 67/299 (22%), Positives = 126/299 (42%), Gaps = 33/299 (11%)

Query: 22  LLYYCFSIGITFYNKWLTKSFHFP--LFMTMLHLAVIFLFSALSRALVQCSSHRARVVLS 79
           L Y   S  I   NK L  ++ FP  +F+ +  +A   +   +S+            ++ 
Sbjct: 32  LFYGTCSFLIVLVNKALLTTYGFPSPIFLGIGQMAATIMILYVSKL---------NKIIH 82

Query: 80  WADYLRRVAPTALATALDV------GLSNWSFLYVTVSLYTMTKSSAVLFILIFSLIFKL 133
           + D+ +++        L        GLS+ S L  ++ ++T+ +   +   L+   I   
Sbjct: 83  FPDFDKKIPVKLFPLPLLYVGNHISGLSSTSKL--SLPMFTVLRKFTIPLTLLLETIILG 140

Query: 134 EELRAALVLVVLLIAGGLFMFTYKSTQFNVEGFALVLGASFIGGIRWTLTQMLLQKAELG 193
           ++    ++L V  I  G F+       FN+EG+  V             T+  +   ELG
Sbjct: 141 KQYSLNIILSVFAIILGAFIAAGSDLAFNLEGYIFVFLNDIFTAANGVYTKQKMDPKELG 200

Query: 194 LQNPI--DTMFHLQPLMFLGLFPLFAVFEGLHLSTSEKIFRFQDTGLLLRVLGSLFLGGI 251
               +  +  F + P +      + +V  G  L  + +  ++++   +L+ L S FLG  
Sbjct: 201 KYGVLFYNACFMIIPTL------IISVSTG-DLQQATEFNQWKNVVFILQFLLSCFLG-- 251

Query: 252 LAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLLAAHLLGDQI-SLLNWLGFALCLSG 309
             F L +S  L     S+LT ++ G  K V    +   + GD I SLLN++G  +C++G
Sbjct: 252 --FLLMYSTVLCSYYNSALTTAVVGAIKNVSVAYIGILIGGDYIFSLLNFVGLNICMAG 308


>gi|164607128 solute carrier family 35, member E1 [Homo sapiens]
          Length = 410

 Score = 53.5 bits (127), Expect = 3e-07
 Identities = 68/313 (21%), Positives = 128/313 (40%), Gaps = 32/313 (10%)

Query: 20  LVLLYYCFSIGITFYNKWLTKSFHFPLFMTMLH-LAVIFLFSALSRAL----------VQ 68
           L LL+Y  S G    NK +  +F FP+ +++ H LA+      L RA             
Sbjct: 33  LCLLWYALSAGGNVVNKVILSAFPFPVTVSLCHILALCAGLPPLLRAWRVPPAPPVSGPG 92

Query: 69  CSSH-RARVVLSWADYLRRVAPTALATALDVGLSNWSFLYVTVSLYTMTKSSAVLFILIF 127
            S H  +  +L    Y R V P A         ++ S   V VS     K++  +++++ 
Sbjct: 93  PSPHPSSGPLLPPRFYPRYVLPLAFGKYFASVSAHVSIWKVPVSYAHTVKATMPIWVVLL 152

Query: 128 SLIFKLEELRAALVLVVLLIAGGLFMFTYKSTQFNVEGFALVLGASFIGGIRWTLTQMLL 187
           S I   E+    + L ++ I  G+ + T     F++ G    L A+    ++   ++ +L
Sbjct: 153 SRIIMKEKQSTKVYLSLIPIISGVLLATVTELSFDMWGLVSALAATLCFSLQNIFSKKVL 212

Query: 188 QKAELGLQNPIDTMFHLQPLMFLGLFPLFAVFE-------GLHLSTSEKIFRFQDTGLLL 240
           + + +          HL+ L  LG   +F +            L +S+  + +Q    LL
Sbjct: 213 RDSRI---------HHLRLLNILGCHAVFFMIPTWVLVDLSAFLVSSDLTYVYQWPWTLL 263

Query: 241 RVLGSLFLGGILAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLLAAHLLGDQISLLNW 300
                L + G   F      F +++  S L+ S+A   K +  + ++  +L + ++  N 
Sbjct: 264 ----LLAVSGFCNFAQNVIAFSILNLVSPLSYSVANATKRIMVITVSLIMLRNPVTSTNV 319

Query: 301 LGFALCLSGISLH 313
           LG    + G+ L+
Sbjct: 320 LGMMTAILGVFLY 332


>gi|189027121 solute carrier family 35, member F1 [Homo sapiens]
          Length = 408

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 73/323 (22%), Positives = 138/323 (42%), Gaps = 58/323 (17%)

Query: 16  LTLGLVLLYYCFSIGITFYNKWLTKSFHF--PLFMTMLHLAVIFLFSALSRALVQCSSHR 73
           + LG VL      IG+T  +K+L++ FH   P+F + L+  ++FL    + A+ Q   + 
Sbjct: 64  VALGQVLSLLICGIGLT--SKYLSEDFHANTPVFQSFLNYILLFLVYTTTLAVRQGEENL 121

Query: 74  ARVVLS-WADYLRRVAPTALATALDVGLSNWSFLYVTVSLYTMTKSSAVLFILIFSLIFK 132
             ++   W  Y+             +GL +    Y+ V  Y  T  +++  +  F     
Sbjct: 122 LAILRRRWWKYMI------------LGLIDLEANYLVVKAYQYTTLTSIQLLDCF----- 164

Query: 133 LEELRAALVLVVLLIAGGLFMFTYKSTQFN-----VEGFALVLGASFIGGIRWTLTQ--- 184
                  ++ VV+L++    +  YK+  F      + G   ++GA  + G      +   
Sbjct: 165 -------VIPVVILLSWFFLLIRYKAVHFIGIVVCILGMGCMVGADVLVGRHQGAGENKL 217

Query: 185 ----MLLQKAEL-GLQNPIDTMF--HLQPLMFLGLFPLF-AVFEGLHLSTSEKIFRFQDT 236
               ++L  A L G+ N  +      L  + FLG+  LF A F G+ L+  E        
Sbjct: 218 VGDLLVLGGATLYGISNVWEEYIIRTLSRVEFLGMIGLFGAFFSGIQLAIMEH------- 270

Query: 237 GLLLRV-----LGSLFLG-GILAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLLAAHL 290
             LL+V     +G L++G     FGL     +++ +TS+ +++++ +  ++ +L     L
Sbjct: 271 KELLKVPWDWQIGLLYVGFSACMFGLYSFMPVVIKKTSATSVNLSLLTADLYSLFCGLFL 330

Query: 291 LGDQISLLNWLGFALCLSGISLH 313
              + S L  L F   L G+ L+
Sbjct: 331 FHYKFSGLYLLSFFTILIGLVLY 353


>gi|14028875 solute carrier family 35 (UDP-glucuronic
           acid/UDP-N-acetylgalactosamine dual transporter), member
           D1 [Homo sapiens]
          Length = 355

 Score = 42.0 bits (97), Expect = 9e-04
 Identities = 41/208 (19%), Positives = 85/208 (40%), Gaps = 20/208 (9%)

Query: 108 VTVSLYTMTKSSAVLFILIFSLIFKLEELRAALVLVVLLIAGGLFMFTYKSTQFNVEGFA 167
           + + ++T+ +  ++LF +    +   +     + + V  +  G F+       F++EG+A
Sbjct: 130 LNLPMFTVLRRFSILFTMFAEGVLLKKTFSWGIKMTVFAMIIGAFVAASSDLAFDLEGYA 189

Query: 168 LVLGASFIGGIRWTLTQMLLQKAELGLQNPI--DTMFHLQPLMFLGLFPLFAVFEGLHLS 225
            +L    +        +  L   ELG    +  + +F + P + +  F            
Sbjct: 190 FILINDVLTAANGAYVKQKLDSKELGKYGLLYYNALFMILPTLAIAYF----------TG 239

Query: 226 TSEKIFRFQ---DTGLLLRVLGSLFLGGILAFGLGFSEFLLVSRTSSLTLSIAGIFKEVC 282
            ++K   F+   DT  LL+   S  +G IL     ++  L     S+LT +I G  K + 
Sbjct: 240 DAQKAVEFEGWADTLFLLQFTLSCVMGFILM----YATVLCTQYNSALTTTIVGCIKNIL 295

Query: 283 TLLLAAHLLGDQI-SLLNWLGFALCLSG 309
              +     GD I +  N++G  + ++G
Sbjct: 296 ITYIGMVFGGDYIFTWTNFIGLNISIAG 323


>gi|5032213 solute carrier family 35, member B1 [Homo sapiens]
          Length = 322

 Score = 38.1 bits (87), Expect = 0.012
 Identities = 51/219 (23%), Positives = 87/219 (39%), Gaps = 17/219 (7%)

Query: 101 SNWSFLYVTVSLYTMTKSSAVLFILIFSLIFKLEELRAALVLVVLLIAGGLFMFTYKSTQ 160
           SN +  +V      + KS   + +++  +    ++   A  L VLLI  G+ +F YK  +
Sbjct: 101 SNSALQFVNYPTQVLGKSCKPIPVMLLGVTLLKKKYPLAKYLCVLLIVAGVALFMYKPKK 160

Query: 161 F-NVE------GFALVLGASFIGGIRWTLTQMLLQKAELGLQNPIDTMFHLQPLMFLGLF 213
              +E      G  L+L +  + G+       +    + G  N +    +L   + LG+ 
Sbjct: 161 VVGIEEHTVGYGELLLLLSLTLDGLTGVSQDHMRAHYQTG-SNHMMLNINLWSTLLLGMG 219

Query: 214 PLFAVFEGLHLSTSEKIFRFQDTGLLLRVLGSLFLGGILAFGLGFSEFLLVSRTSSLTLS 273
            LF       LS +E+            +   L  G   A G  F  F+ V     LT S
Sbjct: 220 ILFTGELWEFLSFAERYPAI--------IYNILLFGLTSALGQSFI-FMTVVYFGPLTCS 270

Query: 274 IAGIFKEVCTLLLAAHLLGDQISLLNWLGFALCLSGISL 312
           I    ++  T+L +  L  + IS + W+G  L   G+ L
Sbjct: 271 IITTTRKFFTILASVILFANPISPMQWVGTVLVFLGLGL 309


>gi|14249528 solute carrier family 35, member B4 [Homo sapiens]
          Length = 331

 Score = 36.6 bits (83), Expect = 0.036
 Identities = 39/225 (17%), Positives = 94/225 (41%), Gaps = 17/225 (7%)

Query: 106 LYVTVSLYTMTKSSAVLFILIFSLIFKLEELRAALVLVVLLIAGGLFMFTYKSTQFNVEG 165
           L + + L+ + +S +++  +I  +I   +         + L++ G+F+ T+ S +     
Sbjct: 86  LNIAMPLHMIFRSGSLIANMILGIIILKKRYSIFKYTSIALVSVGIFICTFMSAKQVTSQ 145

Query: 166 FALVLGASFIGGIRW-----TLTQMLLQKAELGL----------QNPIDTMFHLQPLMFL 210
            +L     F   + W      LT  LL  A +G+          ++  + +F+   L   
Sbjct: 146 SSLSENDGFQAFVWWLLGIGALTFALLMSARMGIFQETLYKRFGKHSKEALFYNHALPLP 205

Query: 211 G-LFPLFAVFEGLHLSTSEKIFRFQDTGLLLRVLGSLFLGGILAFGLGF-SEFLLVSRTS 268
           G +F    +++   L    +++     G+ L ++    L  I+   +     F+L +  +
Sbjct: 206 GFVFLASDIYDHAVLFNKSELYEIPVIGVTLPIMWFYLLMNIITQYVCIRGVFILTTECA 265

Query: 269 SLTLSIAGIFKEVCTLLLAAHLLGDQISLLNWLGFALCLSGISLH 313
           SLT+++    ++  +L+ +     +  +L +WLG      G  ++
Sbjct: 266 SLTVTLVVTLRKFVSLIFSILYFQNPFTLWHWLGTLFVFIGTLMY 310


>gi|122937311 solute carrier family 35, member F4 [Homo sapiens]
          Length = 521

 Score = 36.6 bits (83), Expect = 0.036
 Identities = 48/229 (20%), Positives = 85/229 (37%), Gaps = 27/229 (11%)

Query: 13  KAVLTLGLVLLYYCFSIGITFYNKWLTKSFHFPLFMTML---------------HLAVIF 57
           K +  L ++L      +G T   K   K+F+ P FMT                 HLA   
Sbjct: 163 KGIWGLLIILSVSSSWVGTTQIVKITYKNFYCPFFMTWFSTNWNIMFFPVYYSGHLATAQ 222

Query: 58  LFSALSRALVQCSSHRARVVLSWADYLRRVAPTALATALDVGLSNWSFLYVTVSLYTMTK 117
              +  +   +CS       L+   +L+R AP ++       L+N+ +L     L T T 
Sbjct: 223 EKQSPMKKFRECSRIFGEDGLTLKLFLKRTAPFSILWT----LTNYLYLLALKKL-TATD 277

Query: 118 SSAVL-----FILIFSLIFKLEELRAALVLVVLLIAGGLFMFTYKST--QFNVEGFALVL 170
            SA+      F+ + S I   +      ++  ++   G+ M  Y       ++ G A  +
Sbjct: 278 VSALFCCNKAFVFLLSWIVLKDRFMGVRIVAAIMAITGIVMMAYADNFHADSIIGVAFAV 337

Query: 171 GASFIGGIRWTLTQMLLQKAELGLQNPIDTMFHLQPLMFLGLFPLFAVF 219
           G++    +   L +M L  A  G      +      L+F+   P+   F
Sbjct: 338 GSASTSALYKVLFKMFLGSANFGEAAHFVSTLGFFNLIFISFTPVILYF 386


>gi|38708299 solute carrier family 29 (nucleoside transporters),
           member 2 [Homo sapiens]
          Length = 456

 Score = 30.0 bits (66), Expect = 3.4
 Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 3/110 (2%)

Query: 41  SFHFPLFMTMLHLAVIFLFSALSRALVQCSSHRARVVLSWADYLRRVAPTALATALDVGL 100
           +F+F  ++T+L    + LF+ L+  L QC     R++ S    L   A TA    +D  +
Sbjct: 64  AFNFNNWVTLLSQLPLLLFTLLNSFLYQCVPETVRILGSLLAILLLFALTAALVKVD--M 121

Query: 101 SNWSFLYVTV-SLYTMTKSSAVLFILIFSLIFKLEELRAALVLVVLLIAG 149
           S   F  +T+ S+  +   SAVL   +F  +  +    + L L    +AG
Sbjct: 122 SPGPFFSITMASVCFINSFSAVLQGSLFGQLGTMPSTYSTLFLSGQGLAG 171


>gi|21450850 olfactory receptor, family 12, subfamily D, member 2
           [Homo sapiens]
          Length = 307

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 24/128 (18%)

Query: 30  GITFYNKWLTKSFHF-----PLFMTMLHLAVIFLF--------SALSRALVQCSSHRARV 76
           G T  N+WL  +        P F+T+L    I  +        S L +AL  C+SH   V
Sbjct: 188 GNTELNQWLLSTVTGTIAMGPFFLTLLSYFYIITYLFFKTRSCSMLCKALSTCASHFMVV 247

Query: 77  VLSWADYLRRVAPTALATALDVGLSNWSFLYVTVSLYTMTKSSAVLFILIFSLIFKLEEL 136
           +L +A  L      AL + +D          +   +YT+   + VL  LI++L  + +E+
Sbjct: 248 ILFYAPVLFTYIHPALESFMDQD-------RIVAIMYTVV--TPVLNPLIYTL--RNKEV 296

Query: 137 RAALVLVV 144
           + AL  V+
Sbjct: 297 KGALGRVI 304


>gi|40254891 hypothetical protein FLJ20674 [Homo sapiens]
          Length = 540

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 8/76 (10%)

Query: 290 LLGDQISLLNWLGFALCLSGISLHVALKALHSRGDGGPKALKGLGSSPDLELLLRSSQRE 349
           ++G  +SLL  LG A+ +SG+ LH +       G+         G + D  ++L  S+ E
Sbjct: 414 IVGTIVSLL-LLGLAI-ISGLLLHYSPVFCWKVGN------TSRGQNMDDVMVLVDSEEE 465

Query: 350 EGDNEEEEYFVAQGQQ 365
           E + EEEE   A G+Q
Sbjct: 466 EEEEEEEEEDAAVGEQ 481


>gi|116517323 olfactory receptor, family 4, subfamily C, member 16
           [Homo sapiens]
          Length = 310

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 22/103 (21%)

Query: 110 VSLYTMTKSSAVLFI----LIFSLIFKLEELR---------------AALVLVVLLIAGG 150
           V+L  ++ S A+  +    LIFS +  L  LR               + +++V+L     
Sbjct: 193 VNLLLVSNSGAICAVSYVMLIFSYVIFLHSLRNHSAEVIKKALSTCVSHIIVVILFFGPC 252

Query: 151 LFMFTYKSTQFNVEGFALV---LGASFIGGIRWTLTQMLLQKA 190
           +FM+T  +T F ++    V   +G SF+  + +TL    ++ A
Sbjct: 253 IFMYTCLATVFPMDKMIAVFYTVGTSFLNPVIYTLKNTEVKSA 295


>gi|157739932 mesogenin 1 [Homo sapiens]
          Length = 193

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 13/37 (35%), Positives = 22/37 (59%)

Query: 314 VALKALHSRGDGGPKALKGLGSSPDLELLLRSSQREE 350
           +A +  H +G GGPKA KG      ++   ++S+RE+
Sbjct: 98  LAFQPTHLQGGGGPKAQKGTKVRMSVQRRRKASEREK 134


>gi|4507545 G protein-coupled receptor 137B [Homo sapiens]
          Length = 399

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 33/162 (20%), Positives = 69/162 (42%), Gaps = 22/162 (13%)

Query: 23  LYYCFSIGITFY-----NKWLTK--------------SFHFPLFMTMLHLAVIFLFSALS 63
           L YCF + + F+     N + T+               +  PL++  L ++++FL   L+
Sbjct: 116 LLYCFPVCLQFFTLTLMNLYFTQVIFKAKSKYSPELLKYRLPLYLASLFISLVFLLVNLT 175

Query: 64  RA-LVQCSSHRARVVLSWADYLRRVAPTALATALDVGLSNWSFLYVTVSLYTMTKSSAVL 122
            A LV+  +   +V++S    +        A +L + L   S + +  ++Y  +K S+V 
Sbjct: 176 CAVLVKTGNWERKVIVSVRVAINDTLFVLCAVSLSICLYKISKMSL-ANIYLESKGSSVC 234

Query: 123 FILIFSL-IFKLEELRAALVLVVLLIAGGLFMFTYKSTQFNV 163
            +    + +  L   RA   L +L  +    + ++    +NV
Sbjct: 235 QVTAIGVTVILLYTSRACYNLFILSFSQNKSVHSFDYDWYNV 276


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.329    0.142    0.428 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,007,123
Number of Sequences: 37866
Number of extensions: 467925
Number of successful extensions: 1611
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1591
Number of HSP's gapped (non-prelim): 21
length of query: 365
length of database: 18,247,518
effective HSP length: 104
effective length of query: 261
effective length of database: 14,309,454
effective search space: 3734767494
effective search space used: 3734767494
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 62 (28.5 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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