Guide to the Human Genome
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Search of human proteins with 25453472

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|25453472 eukaryotic translation elongation factor 1 delta
isoform 2 [Homo sapiens]
         (281 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|194239731 eukaryotic translation elongation factor 1 delta is...   553   e-158
gi|194239727 eukaryotic translation elongation factor 1 delta is...   553   e-158
gi|194239725 eukaryotic translation elongation factor 1 delta is...   553   e-158
gi|194239723 eukaryotic translation elongation factor 1 delta is...   553   e-158
gi|25453472 eukaryotic translation elongation factor 1 delta iso...   553   e-158
gi|25453474 eukaryotic translation elongation factor 1 delta iso...   553   e-158
gi|194239729 eukaryotic translation elongation factor 1 delta is...   496   e-141
gi|11136628 eukaryotic translation elongation factor 1 beta 2 [H...   224   5e-59
gi|4503477 eukaryotic translation elongation factor 1 beta 2 [Ho...   224   5e-59
gi|83376130 eukaryotic translation elongation factor 1 beta 2 [H...   224   5e-59
gi|51093861 caspase recruitment domain protein 10 [Homo sapiens]       44   1e-04
gi|32484979 adaptor-related protein complex 3, beta 1 subunit [H...    40   0.002
gi|55956788 nucleolin [Homo sapiens]                                   39   0.007
gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens]         38   0.011
gi|31982906 cingulin-like 1 [Homo sapiens]                             38   0.011
gi|21735548 centrosomal protein 2 [Homo sapiens]                       37   0.025
gi|7661990 mastermind-like 1 [Homo sapiens]                            36   0.033
gi|4502443 dystonin isoform 1e precursor [Homo sapiens]                36   0.043
gi|91825557 kinesin light chain 3 [Homo sapiens]                       35   0.056
gi|228008351 coiled-coil domain containing 48 [Homo sapiens]           34   0.13 
gi|41322923 plectin 1 isoform 11 [Homo sapiens]                        34   0.13 
gi|41322914 plectin 1 isoform 10 [Homo sapiens]                        34   0.13 
gi|41322919 plectin 1 isoform 8 [Homo sapiens]                         34   0.13 
gi|41322910 plectin 1 isoform 7 [Homo sapiens]                         34   0.13 
gi|41322916 plectin 1 isoform 6 [Homo sapiens]                         34   0.13 
gi|41322908 plectin 1 isoform 3 [Homo sapiens]                         34   0.13 
gi|41322912 plectin 1 isoform 2 [Homo sapiens]                         34   0.13 
gi|47607492 plectin 1 isoform 1 [Homo sapiens]                         34   0.13 
gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens]     34   0.16 
gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens]     34   0.16 

>gi|194239731 eukaryotic translation elongation factor 1 delta
           isoform 2 [Homo sapiens]
          Length = 281

 Score =  553 bits (1425), Expect = e-158
 Identities = 281/281 (100%), Positives = 281/281 (100%)

Query: 1   MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKS 60
           MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKS
Sbjct: 1   MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKS 60

Query: 61  LAGSSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP 120
           LAGSSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP
Sbjct: 61  LAGSSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP 120

Query: 121 GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR 180
           GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR
Sbjct: 121 GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR 180

Query: 181 QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI 240
           QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI
Sbjct: 181 QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI 240

Query: 241 RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI 281
           RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI
Sbjct: 241 RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI 281


>gi|194239727 eukaryotic translation elongation factor 1 delta
           isoform 2 [Homo sapiens]
          Length = 281

 Score =  553 bits (1425), Expect = e-158
 Identities = 281/281 (100%), Positives = 281/281 (100%)

Query: 1   MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKS 60
           MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKS
Sbjct: 1   MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKS 60

Query: 61  LAGSSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP 120
           LAGSSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP
Sbjct: 61  LAGSSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP 120

Query: 121 GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR 180
           GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR
Sbjct: 121 GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR 180

Query: 181 QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI 240
           QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI
Sbjct: 181 QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI 240

Query: 241 RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI 281
           RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI
Sbjct: 241 RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI 281


>gi|194239725 eukaryotic translation elongation factor 1 delta
           isoform 3 [Homo sapiens]
          Length = 646

 Score =  553 bits (1425), Expect = e-158
 Identities = 281/281 (100%), Positives = 281/281 (100%)

Query: 1   MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKS 60
           MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKS
Sbjct: 366 MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKS 425

Query: 61  LAGSSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP 120
           LAGSSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP
Sbjct: 426 LAGSSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP 485

Query: 121 GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR 180
           GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR
Sbjct: 486 GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR 545

Query: 181 QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI 240
           QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI
Sbjct: 546 QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI 605

Query: 241 RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI 281
           RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI
Sbjct: 606 RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI 646



 Score = 36.6 bits (83), Expect = 0.025
 Identities = 15/31 (48%), Positives = 21/31 (67%)

Query: 9  EKIWFDKFKYDDAERRFYEQMNGPVAGASRQ 39
          E +W DK KY++AERRFYE      A +++Q
Sbjct: 11 ETVWEDKHKYEEAERRFYEHEATQAAASAQQ 41



 Score = 29.3 bits (64), Expect = 4.0
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 1/60 (1%)

Query: 10  KIWFDKFKYDDAERRFYEQM-NGPVAGASRQENGASVILRDIARARENIQKSLAGSSGPG 68
           ++W +K +YD AER FYE + +G   G  R +  A +        R+   +++ G+   G
Sbjct: 231 EVWLEKPRYDAAERGFYEALFDGHPPGKVRLQERAGLAEGARRGRRDRRGRNILGNKRAG 290


>gi|194239723 eukaryotic translation elongation factor 1 delta
           isoform 1 [Homo sapiens]
          Length = 647

 Score =  553 bits (1425), Expect = e-158
 Identities = 281/281 (100%), Positives = 281/281 (100%)

Query: 1   MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKS 60
           MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKS
Sbjct: 367 MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKS 426

Query: 61  LAGSSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP 120
           LAGSSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP
Sbjct: 427 LAGSSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP 486

Query: 121 GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR 180
           GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR
Sbjct: 487 GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR 546

Query: 181 QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI 240
           QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI
Sbjct: 547 QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI 606

Query: 241 RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI 281
           RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI
Sbjct: 607 RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI 647



 Score = 36.6 bits (83), Expect = 0.025
 Identities = 15/31 (48%), Positives = 21/31 (67%)

Query: 9  EKIWFDKFKYDDAERRFYEQMNGPVAGASRQ 39
          E +W DK KY++AERRFYE      A +++Q
Sbjct: 11 ETVWEDKHKYEEAERRFYEHEATQAAASAQQ 41



 Score = 29.3 bits (64), Expect = 4.0
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 1/60 (1%)

Query: 10  KIWFDKFKYDDAERRFYEQM-NGPVAGASRQENGASVILRDIARARENIQKSLAGSSGPG 68
           ++W +K +YD AER FYE + +G   G  R +  A +        R+   +++ G+   G
Sbjct: 231 EVWLEKPRYDAAERGFYEALFDGHPPGKVRLQERAGLAEGARRGRRDRRGRNILGNKRAG 290


>gi|25453472 eukaryotic translation elongation factor 1 delta
           isoform 2 [Homo sapiens]
          Length = 281

 Score =  553 bits (1425), Expect = e-158
 Identities = 281/281 (100%), Positives = 281/281 (100%)

Query: 1   MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKS 60
           MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKS
Sbjct: 1   MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKS 60

Query: 61  LAGSSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP 120
           LAGSSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP
Sbjct: 61  LAGSSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP 120

Query: 121 GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR 180
           GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR
Sbjct: 121 GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR 180

Query: 181 QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI 240
           QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI
Sbjct: 181 QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI 240

Query: 241 RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI 281
           RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI
Sbjct: 241 RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI 281


>gi|25453474 eukaryotic translation elongation factor 1 delta
           isoform 1 [Homo sapiens]
          Length = 647

 Score =  553 bits (1425), Expect = e-158
 Identities = 281/281 (100%), Positives = 281/281 (100%)

Query: 1   MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKS 60
           MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKS
Sbjct: 367 MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKS 426

Query: 61  LAGSSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP 120
           LAGSSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP
Sbjct: 427 LAGSSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP 486

Query: 121 GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR 180
           GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR
Sbjct: 487 GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR 546

Query: 181 QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI 240
           QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI
Sbjct: 547 QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI 606

Query: 241 RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI 281
           RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI
Sbjct: 607 RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI 647



 Score = 36.6 bits (83), Expect = 0.025
 Identities = 15/31 (48%), Positives = 21/31 (67%)

Query: 9  EKIWFDKFKYDDAERRFYEQMNGPVAGASRQ 39
          E +W DK KY++AERRFYE      A +++Q
Sbjct: 11 ETVWEDKHKYEEAERRFYEHEATQAAASAQQ 41



 Score = 29.3 bits (64), Expect = 4.0
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 1/60 (1%)

Query: 10  KIWFDKFKYDDAERRFYEQM-NGPVAGASRQENGASVILRDIARARENIQKSLAGSSGPG 68
           ++W +K +YD AER FYE + +G   G  R +  A +        R+   +++ G+   G
Sbjct: 231 EVWLEKPRYDAAERGFYEALFDGHPPGKVRLQERAGLAEGARRGRRDRRGRNILGNKRAG 290


>gi|194239729 eukaryotic translation elongation factor 1 delta
           isoform 4 [Homo sapiens]
          Length = 257

 Score =  496 bits (1277), Expect = e-141
 Identities = 257/281 (91%), Positives = 257/281 (91%), Gaps = 24/281 (8%)

Query: 1   MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKS 60
           MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQ                     
Sbjct: 1   MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQ--------------------- 39

Query: 61  LAGSSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP 120
              SSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP
Sbjct: 40  ---SSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP 96

Query: 121 GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR 180
           GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR
Sbjct: 97  GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR 156

Query: 181 QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI 240
           QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI
Sbjct: 157 QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI 216

Query: 241 RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI 281
           RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI
Sbjct: 217 RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI 257


>gi|11136628 eukaryotic translation elongation factor 1 beta 2 [Homo
           sapiens]
          Length = 225

 Score =  224 bits (572), Expect = 5e-59
 Identities = 113/144 (78%), Positives = 127/144 (88%), Gaps = 2/144 (1%)

Query: 138 VEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLRQYAEKKAKKPALVAKSS 197
           VE      AT ++DD  DDIDLFGSD+EEE +EA +LREERL QY  KKAKKPALVAKSS
Sbjct: 84  VEDTTGSGATDSKDD--DDIDLFGSDDEEESEEAKRLREERLAQYESKKAKKPALVAKSS 141

Query: 198 ILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGIRKLQIQCVVEDDKVGTD 257
           ILLDVKPWDDETDMA+LE CVRSIQ DGLVWG+SKLVPVGYGI+KLQIQCVVEDDKVGTD
Sbjct: 142 ILLDVKPWDDETDMAKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTD 201

Query: 258 LLEEEITKFEEHVQSVDIAAFNKI 281
           +LEE+IT FE++VQS+D+AAFNKI
Sbjct: 202 MLEEQITAFEDYVQSMDVAAFNKI 225


>gi|4503477 eukaryotic translation elongation factor 1 beta 2 [Homo
           sapiens]
          Length = 225

 Score =  224 bits (572), Expect = 5e-59
 Identities = 113/144 (78%), Positives = 127/144 (88%), Gaps = 2/144 (1%)

Query: 138 VEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLRQYAEKKAKKPALVAKSS 197
           VE      AT ++DD  DDIDLFGSD+EEE +EA +LREERL QY  KKAKKPALVAKSS
Sbjct: 84  VEDTTGSGATDSKDD--DDIDLFGSDDEEESEEAKRLREERLAQYESKKAKKPALVAKSS 141

Query: 198 ILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGIRKLQIQCVVEDDKVGTD 257
           ILLDVKPWDDETDMA+LE CVRSIQ DGLVWG+SKLVPVGYGI+KLQIQCVVEDDKVGTD
Sbjct: 142 ILLDVKPWDDETDMAKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTD 201

Query: 258 LLEEEITKFEEHVQSVDIAAFNKI 281
           +LEE+IT FE++VQS+D+AAFNKI
Sbjct: 202 MLEEQITAFEDYVQSMDVAAFNKI 225


>gi|83376130 eukaryotic translation elongation factor 1 beta 2 [Homo
           sapiens]
          Length = 225

 Score =  224 bits (572), Expect = 5e-59
 Identities = 113/144 (78%), Positives = 127/144 (88%), Gaps = 2/144 (1%)

Query: 138 VEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLRQYAEKKAKKPALVAKSS 197
           VE      AT ++DD  DDIDLFGSD+EEE +EA +LREERL QY  KKAKKPALVAKSS
Sbjct: 84  VEDTTGSGATDSKDD--DDIDLFGSDDEEESEEAKRLREERLAQYESKKAKKPALVAKSS 141

Query: 198 ILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGIRKLQIQCVVEDDKVGTD 257
           ILLDVKPWDDETDMA+LE CVRSIQ DGLVWG+SKLVPVGYGI+KLQIQCVVEDDKVGTD
Sbjct: 142 ILLDVKPWDDETDMAKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTD 201

Query: 258 LLEEEITKFEEHVQSVDIAAFNKI 281
           +LEE+IT FE++VQS+D+AAFNKI
Sbjct: 202 MLEEQITAFEDYVQSMDVAAFNKI 225


>gi|51093861 caspase recruitment domain protein 10 [Homo sapiens]
          Length = 1032

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 70/288 (24%), Positives = 118/288 (40%), Gaps = 33/288 (11%)

Query: 3   TNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKSLA 62
           T FL  E     + +    +R    Q  G V    R   G    LRD  +A+E  Q+   
Sbjct: 133 TQFLMTEVRRLREARKSQLQREQQLQARGRVLEEERA--GLEQRLRDQQQAQERCQRLRE 190

Query: 63  G-SSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKS-SP 120
              +G         ++  + +R+A L  E  S     ++LQ A+ +L+ +++ LE+  + 
Sbjct: 191 DWEAGSLELLRLKDENYMIAMRLAQLSEEKNSAVLRSRDLQLAVDQLKLKVSRLEEECAL 250

Query: 121 GHRATAPQTQHVSPMRQVEPPA--KKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREER 178
             RA  P            PP   +K     ++ E D++DL      E  +  A LRE  
Sbjct: 251 LRRARGP------------PPGAEEKEKEKEKEKEPDNVDLVSELRAENQRLTASLRE-- 296

Query: 179 LRQYAEKKAKKPALVAKSSILLDV--KPWDDETDMAQLEACVRSIQLDG-LVWG------ 229
           L++  +++A +P       ILLD+    W +  D  Q E C +   + G L W       
Sbjct: 297 LQEGLQQEASRPGAPGSERILLDILEHDWREAQDSRQ-ELCQKLHAVQGELQWAEELRDQ 355

Query: 230 -ASKLVPVGYGIRKLQIQCVVEDDKVGTDL--LEEEITKFEEHVQSVD 274
              ++  +    R LQ  C +   ++ T L  LEE   + ++ +QS D
Sbjct: 356 YLQEMEDLRLKHRTLQKDCDLYKHRMATVLAQLEEIEKERDQAIQSRD 403


>gi|32484979 adaptor-related protein complex 3, beta 1 subunit [Homo
           sapiens]
          Length = 1094

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 39/170 (22%), Positives = 66/170 (38%), Gaps = 12/170 (7%)

Query: 34  AGASRQENGASVILRDIARARENIQKSLAGSSGPGASSGTSGDHGELVVRIASLEVENQS 93
           AG ++QEN A     +     ++   S    S  G+ SG  G+ GE          E  S
Sbjct: 663 AGKAKQENSAKKFYSESEEEEDSSDSSSDSESESGSESGEQGESGE----------EGDS 712

Query: 94  LRGVVQELQQAISKLEARLNVLEKSSPGHRATAPQTQHVSPMRQVEPPAKKPATPAEDDE 153
                ++          R + LE      R +  + +  S   + E    K  + + +DE
Sbjct: 713 NEDSSEDSSSEQDSESGRESGLENKRTAKRNSKAKGKSDSEDGEKENEKSK-TSDSSNDE 771

Query: 154 DDDIDLFGSDNEEEDKEAAQLREERLRQYAEKKAKKPAL-VAKSSILLDV 202
              I+   SD+E E +  ++    R+ +  EKK K+    + K   LLD+
Sbjct: 772 SSSIEDSSSDSESESEPESESESRRVTKEKEKKTKQDRTPLTKDVSLLDL 821


>gi|55956788 nucleolin [Homo sapiens]
          Length = 710

 Score = 38.5 bits (88), Expect = 0.007
 Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 8/79 (10%)

Query: 137 QVEPPAKK-----PATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLRQYAEKKAKKPA 191
           ++EP A K     PA+  EDDEDD+ D    D+EE+D E   +     +    KKA K  
Sbjct: 169 EIEPAAMKAAAAAPASEDEDDEDDEDDEDDDDDEEDDSEEEAMETTPAK---GKKAAKVV 225

Query: 192 LVAKSSILLDVKPWDDETD 210
            V   ++  D    +D+ D
Sbjct: 226 PVKAKNVAEDEDEEEDDED 244



 Score = 33.9 bits (76), Expect = 0.16
 Identities = 33/123 (26%), Positives = 50/123 (40%), Gaps = 42/123 (34%)

Query: 119 SPGHRATA-PQTQHVSPMRQVEPPAKKPATP----------------------------- 148
           +PG +A A P  + V+P + V  P KK ATP                             
Sbjct: 84  TPGKKAAATPAKKTVTPAKAVTTPGKKGATPGKALVATPGKKGAAIPAKGAKNGKNAKKE 143

Query: 149 -AEDDEDDDIDLFGSDNEEEDKEAAQLREERLRQYAEKKAKKPALVAKSSILLDVKPWDD 207
            ++++EDDD +    D+E+ED++  ++         E  A K A  A +S   D    DD
Sbjct: 144 DSDEEEDDDSEEDEEDDEDEDEDEDEI---------EPAAMKAAAAAPAS--EDEDDEDD 192

Query: 208 ETD 210
           E D
Sbjct: 193 EDD 195



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 13/42 (30%), Positives = 27/42 (64%)

Query: 150 EDDEDDDIDLFGSDNEEEDKEAAQLREERLRQYAEKKAKKPA 191
           ++D+DDD D    D+E++++E  +  EE +++   K+ K+ A
Sbjct: 244 DEDDDDDEDDEDDDDEDDEEEEEEEEEEPVKEAPGKRKKEMA 285



 Score = 30.4 bits (67), Expect = 1.8
 Identities = 16/48 (33%), Positives = 27/48 (56%)

Query: 150 EDDEDDDIDLFGSDNEEEDKEAAQLREERLRQYAEKKAKKPALVAKSS 197
           ED++DDD +    D++E+D+E  +  EE   + A  K KK     K++
Sbjct: 243 EDEDDDDDEDDEDDDDEDDEEEEEEEEEEPVKEAPGKRKKEMAKQKAA 290



 Score = 29.6 bits (65), Expect = 3.1
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%)

Query: 150 EDDEDDDIDLFGSDNEEEDKEAAQLREERLRQYAEKKAKKPALVAKSSILLDVKP 204
           EDDEDDD +    + EEE++E   ++E   ++  E   +K A  AK   +   +P
Sbjct: 251 EDDEDDDDE--DDEEEEEEEEEEPVKEAPGKRKKEMAKQKAAPEAKKQKVEGTEP 303


>gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens]
          Length = 3907

 Score = 37.7 bits (86), Expect = 0.011
 Identities = 46/204 (22%), Positives = 88/204 (43%), Gaps = 16/204 (7%)

Query: 83   RIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSPGHRATAPQTQHVSPMRQVEPPA 142
            + + L +  + L+  +QE  + I KLE R+  LE++      +A   Q V   +      
Sbjct: 2124 KCSELLLSKEQLQRDIQERNEEIEKLEFRVRELEQAL---LVSADTFQKVEDRKHFGAVE 2180

Query: 143  KKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLRQYAEKKAKKPALVAKSSILLDV 202
             KP    E     + D      + ++KE   L EE+L Q+ E+   K   V +  + L++
Sbjct: 2181 AKPELSLEVQLQAERDAI----DRKEKEITNL-EEQLEQFREELENKNEEVQQLHMQLEI 2235

Query: 203  KPWDDETDMAQLEACVRSIQLD----GLVWGASKLVPV-GYGIRKLQIQCVVEDDKVGTD 257
            +  +  T + +LE   +  + D    GL    S  +      +   +   ++++ +V  D
Sbjct: 2236 QKKESTTRLQELEQENKLFKDDMEKLGLAIKESDAMSTQDQHVLFGKFAQIIQEKEVEID 2295

Query: 258  LLEEEITKFEEHVQSVDIAAFNKI 281
             L E++TK +   Q + I   NK+
Sbjct: 2296 QLNEQVTKLQ---QQLKITTDNKV 2316



 Score = 29.3 bits (64), Expect = 4.0
 Identities = 42/197 (21%), Positives = 78/197 (39%), Gaps = 32/197 (16%)

Query: 86   SLEVENQSLRGVVQELQQAISKLEARLNVLEKSSPGHRATAPQTQHVSPMRQVEPPAKKP 145
            SLEV+ Q+ R  +   ++ I+ LE +L    +          Q        Q+E   K+ 
Sbjct: 2186 SLEVQLQAERDAIDRKEKEITNLEEQLEQFREELENKNEEVQQLH-----MQLEIQKKES 2240

Query: 146  ATPAEDDED------DDIDLFGSDNEEEDKEAAQLREERLRQYAEKKAKKPALVAKSSIL 199
             T  ++ E       DD++  G   +E D  + Q +     ++A+   +K          
Sbjct: 2241 TTRLQELEQENKLFKDDMEKLGLAIKESDAMSTQDQHVLFGKFAQIIQEK---------- 2290

Query: 200  LDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYG-IRKL--QIQCVVEDDKVGT 256
                    E ++ QL   V  +Q    +   +K++      IR L  QI+C++ D +   
Sbjct: 2291 --------EVEIDQLNEQVTKLQQQLKITTDNKVIEEKNELIRDLETQIECLMSDQECVK 2342

Query: 257  DLLEEEITKFEEHVQSV 273
               EEEI +  E ++ +
Sbjct: 2343 RNREEEIEQLNEVIEKL 2359


>gi|31982906 cingulin-like 1 [Homo sapiens]
          Length = 1302

 Score = 37.7 bits (86), Expect = 0.011
 Identities = 33/147 (22%), Positives = 75/147 (51%), Gaps = 14/147 (9%)

Query: 49  DIARARENIQKSLAGSSGPGASSGTSG-DHGELVVRIASLEVENQSLRGVVQELQQAISK 107
           ++   RE+++++        + S TS  D     +R+  L+ EN+ L+G  +EL++ +++
Sbjct: 788 ELQALRESVEEATKNVEVLASRSNTSEQDQAGTEMRVKLLQEENEKLQGRSEELERRVAQ 847

Query: 108 LEARLNVLEKSSPGHRATAPQT--QHVSPMRQVEP------PAKKPATPAEDDEDDDIDL 159
           L+ ++  L+    G  A A +T  ++   +RQ+E         +K A  A    +++++ 
Sbjct: 848 LQRQIEDLK----GDEAKAKETLKKYEGEIRQLEEALVHARKEEKEAVSARRALENELEA 903

Query: 160 FGSDNEEEDKEAAQLREERLRQYAEKK 186
              +  +  +E  QL  E+L++ +E+K
Sbjct: 904 AQGNLSQTTQEQKQL-SEKLKEESEQK 929


>gi|21735548 centrosomal protein 2 [Homo sapiens]
          Length = 2442

 Score = 36.6 bits (83), Expect = 0.025
 Identities = 35/147 (23%), Positives = 67/147 (45%), Gaps = 12/147 (8%)

Query: 48   RDIARARENIQKSLAGSSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISK 107
            R++   R+ +Q+      GP  +   S +H +L++R    EVE Q     + ELQ+   +
Sbjct: 1697 RELTTQRQLMQERAEEGKGPSKAQRGSLEHMKLILRDKEKEVECQQEH--IHELQELKDQ 1754

Query: 108  LEARLNVL-EKSSPGHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDID-----LFG 161
            LE +L  L  K        + + Q +  ++Q    A++     E      +D     L  
Sbjct: 1755 LEQQLQGLHRKVGETSLLLSQREQEIVVLQQQLQEAREQGELKEQSLQSQLDEAQRALAQ 1814

Query: 162  SDNE----EEDKEAAQLREERLRQYAE 184
             D E    +++++ AQ +EER+++ A+
Sbjct: 1815 RDQELEALQQEQQQAQGQEERVKEKAD 1841



 Score = 33.1 bits (74), Expect = 0.28
 Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 18/106 (16%)

Query: 43   ASVILRDIARARENIQKSLAGSS-------GPGASS----GTSGDHGELVVRIASLE--- 88
            ASV+ RD  + R   +  L   +        PGA+S    G+ G+ G  +  ++ +E   
Sbjct: 2199 ASVLERDSEQQRLQDELELTRRALEKERLHSPGATSTAELGSRGEQGVQLGEVSGVEAEP 2258

Query: 89   ----VENQSLRGVVQELQQAISKLEARLNVLEKSSPGHRATAPQTQ 130
                +E QS R  ++ LQQA+++LE   + L++ +   R+T  Q +
Sbjct: 2259 SPDGMEKQSWRQRLEHLQQAVARLEIDRSRLQRHNVQLRSTLEQVE 2304


>gi|7661990 mastermind-like 1 [Homo sapiens]
          Length = 1016

 Score = 36.2 bits (82), Expect = 0.033
 Identities = 37/125 (29%), Positives = 57/125 (45%), Gaps = 21/125 (16%)

Query: 34  AGASRQENGASVILRDIARARENIQKSLAG----SSGPGASSGTSGDHGELVVRIASLEV 89
           +G  R +N +  ++   A+A +N Q++LAG    S GPG +S  S  H   + +IA+ + 
Sbjct: 351 SGQPRADNPSPNLMPASAQA-QNAQRALAGVVLPSQGPGGASELSSAHQ--LQQIAAKQK 407

Query: 90  ENQSLRGVVQELQQAISKLEARLNVLEKSSPGHRATAPQTQHVSPMRQVEPPAKKPATPA 149
             Q L    Q  QQA              +PG  +T  QT        V  P +KPA+P+
Sbjct: 408 REQML----QNPQQATPA----------PAPGQMSTWQQTGPSHSSLDVPYPMEKPASPS 453

Query: 150 EDDED 154
              +D
Sbjct: 454 SYKQD 458


>gi|4502443 dystonin isoform 1e precursor [Homo sapiens]
          Length = 2649

 Score = 35.8 bits (81), Expect = 0.043
 Identities = 30/119 (25%), Positives = 60/119 (50%), Gaps = 5/119 (4%)

Query: 75   GDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSPGHRATAPQTQHVSP 134
            G + +L+ R  +  +EN  L G + EL++ +++L+ + + +E+  P  R  A + +    
Sbjct: 1117 GAYSDLLQRQKATVLENSKLTGKISELERMVAELKKQKSRVEEELPKVREAA-ENELRKQ 1175

Query: 135  MRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLRQYA-EKKAKKPAL 192
             R VE  + +      + +    +L   +    +KEAA+   ER+RQ   E +AK+ A+
Sbjct: 1176 QRNVEDISLQKIRAESEAKQYRREL---ETIVREKEAAERELERVRQLTIEAEAKRAAV 1231


>gi|91825557 kinesin light chain 3 [Homo sapiens]
          Length = 504

 Score = 35.4 bits (80), Expect = 0.056
 Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 7/94 (7%)

Query: 80  LVVRIASLEVENQSLRGVVQELQQA-------ISKLEARLNVLEKSSPGHRATAPQTQHV 132
           L   + +LE E Q LR   + L Q        + + + RL   E+S           + +
Sbjct: 91  LSAHVGALEAEKQRLRSQARRLAQENVWLREELEETQRRLRASEESVAQLEEEKRHLEFL 150

Query: 133 SPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEE 166
             +RQ +PPA+   + +    D    LF S+ EE
Sbjct: 151 GQLRQYDPPAESQQSESPPRRDSLASLFPSEEEE 184


>gi|228008351 coiled-coil domain containing 48 [Homo sapiens]
          Length = 598

 Score = 34.3 bits (77), Expect = 0.13
 Identities = 20/59 (33%), Positives = 31/59 (52%)

Query: 76  DHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSPGHRATAPQTQHVSP 134
           D G    R+A LE EN SLR +V++L+ A+   +AR   L+      +A+  +  H  P
Sbjct: 192 DSGPDCERVARLEEENSSLRELVEDLRAALQSSDARCLALQVGLWKSQASTHEMGHGGP 250


>gi|41322923 plectin 1 isoform 11 [Homo sapiens]
          Length = 4547

 Score = 34.3 bits (77), Expect = 0.13
 Identities = 45/185 (24%), Positives = 84/185 (45%), Gaps = 13/185 (7%)

Query: 20   DAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKSLAGSSGPGAS-SGTSGDHG 78
            +AER+   +M+   A A R +   + + R  ARA E+ Q+    +   G     T     
Sbjct: 2369 EAERQRQLEMS---AEAERLKLRVAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTELATQ 2425

Query: 79   ELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSPGHRATAPQTQHVSPMRQV 138
            E V  + +LE++ Q      + L++AI++LE     L++ +   +  + + Q V   + +
Sbjct: 2426 EKVTLVQTLEIQRQQSDHDAERLREAIAELEREKEKLQQEAKLLQLKSEEMQTVQQEQLL 2485

Query: 139  -EPPAKKPATPAEDDEDDDIDLFGSDN--------EEEDKEAAQLREERLRQYAEKKAKK 189
             E  A + +  +E D     + F            ++E  +A QLREE+ RQ  + + ++
Sbjct: 2486 QETQALQQSFLSEKDSLLQRERFIEQEKAKLEQLFQDEVAKAQQLREEQQRQQQQMEQER 2545

Query: 190  PALVA 194
              LVA
Sbjct: 2546 QRLVA 2550


>gi|41322914 plectin 1 isoform 10 [Homo sapiens]
          Length = 4551

 Score = 34.3 bits (77), Expect = 0.13
 Identities = 45/185 (24%), Positives = 84/185 (45%), Gaps = 13/185 (7%)

Query: 20   DAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKSLAGSSGPGAS-SGTSGDHG 78
            +AER+   +M+   A A R +   + + R  ARA E+ Q+    +   G     T     
Sbjct: 2373 EAERQRQLEMS---AEAERLKLRVAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTELATQ 2429

Query: 79   ELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSPGHRATAPQTQHVSPMRQV 138
            E V  + +LE++ Q      + L++AI++LE     L++ +   +  + + Q V   + +
Sbjct: 2430 EKVTLVQTLEIQRQQSDHDAERLREAIAELEREKEKLQQEAKLLQLKSEEMQTVQQEQLL 2489

Query: 139  -EPPAKKPATPAEDDEDDDIDLFGSDN--------EEEDKEAAQLREERLRQYAEKKAKK 189
             E  A + +  +E D     + F            ++E  +A QLREE+ RQ  + + ++
Sbjct: 2490 QETQALQQSFLSEKDSLLQRERFIEQEKAKLEQLFQDEVAKAQQLREEQQRQQQQMEQER 2549

Query: 190  PALVA 194
              LVA
Sbjct: 2550 QRLVA 2554


>gi|41322919 plectin 1 isoform 8 [Homo sapiens]
          Length = 4547

 Score = 34.3 bits (77), Expect = 0.13
 Identities = 45/185 (24%), Positives = 84/185 (45%), Gaps = 13/185 (7%)

Query: 20   DAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKSLAGSSGPGAS-SGTSGDHG 78
            +AER+   +M+   A A R +   + + R  ARA E+ Q+    +   G     T     
Sbjct: 2369 EAERQRQLEMS---AEAERLKLRVAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTELATQ 2425

Query: 79   ELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSPGHRATAPQTQHVSPMRQV 138
            E V  + +LE++ Q      + L++AI++LE     L++ +   +  + + Q V   + +
Sbjct: 2426 EKVTLVQTLEIQRQQSDHDAERLREAIAELEREKEKLQQEAKLLQLKSEEMQTVQQEQLL 2485

Query: 139  -EPPAKKPATPAEDDEDDDIDLFGSDN--------EEEDKEAAQLREERLRQYAEKKAKK 189
             E  A + +  +E D     + F            ++E  +A QLREE+ RQ  + + ++
Sbjct: 2486 QETQALQQSFLSEKDSLLQRERFIEQEKAKLEQLFQDEVAKAQQLREEQQRQQQQMEQER 2545

Query: 190  PALVA 194
              LVA
Sbjct: 2546 QRLVA 2550


>gi|41322910 plectin 1 isoform 7 [Homo sapiens]
          Length = 4515

 Score = 34.3 bits (77), Expect = 0.13
 Identities = 45/185 (24%), Positives = 84/185 (45%), Gaps = 13/185 (7%)

Query: 20   DAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKSLAGSSGPGAS-SGTSGDHG 78
            +AER+   +M+   A A R +   + + R  ARA E+ Q+    +   G     T     
Sbjct: 2337 EAERQRQLEMS---AEAERLKLRVAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTELATQ 2393

Query: 79   ELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSPGHRATAPQTQHVSPMRQV 138
            E V  + +LE++ Q      + L++AI++LE     L++ +   +  + + Q V   + +
Sbjct: 2394 EKVTLVQTLEIQRQQSDHDAERLREAIAELEREKEKLQQEAKLLQLKSEEMQTVQQEQLL 2453

Query: 139  -EPPAKKPATPAEDDEDDDIDLFGSDN--------EEEDKEAAQLREERLRQYAEKKAKK 189
             E  A + +  +E D     + F            ++E  +A QLREE+ RQ  + + ++
Sbjct: 2454 QETQALQQSFLSEKDSLLQRERFIEQEKAKLEQLFQDEVAKAQQLREEQQRQQQQMEQER 2513

Query: 190  PALVA 194
              LVA
Sbjct: 2514 QRLVA 2518


>gi|41322916 plectin 1 isoform 6 [Homo sapiens]
          Length = 4684

 Score = 34.3 bits (77), Expect = 0.13
 Identities = 45/185 (24%), Positives = 84/185 (45%), Gaps = 13/185 (7%)

Query: 20   DAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKSLAGSSGPGAS-SGTSGDHG 78
            +AER+   +M+   A A R +   + + R  ARA E+ Q+    +   G     T     
Sbjct: 2506 EAERQRQLEMS---AEAERLKLRVAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTELATQ 2562

Query: 79   ELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSPGHRATAPQTQHVSPMRQV 138
            E V  + +LE++ Q      + L++AI++LE     L++ +   +  + + Q V   + +
Sbjct: 2563 EKVTLVQTLEIQRQQSDHDAERLREAIAELEREKEKLQQEAKLLQLKSEEMQTVQQEQLL 2622

Query: 139  -EPPAKKPATPAEDDEDDDIDLFGSDN--------EEEDKEAAQLREERLRQYAEKKAKK 189
             E  A + +  +E D     + F            ++E  +A QLREE+ RQ  + + ++
Sbjct: 2623 QETQALQQSFLSEKDSLLQRERFIEQEKAKLEQLFQDEVAKAQQLREEQQRQQQQMEQER 2682

Query: 190  PALVA 194
              LVA
Sbjct: 2683 QRLVA 2687


>gi|41322908 plectin 1 isoform 3 [Homo sapiens]
          Length = 4525

 Score = 34.3 bits (77), Expect = 0.13
 Identities = 45/185 (24%), Positives = 84/185 (45%), Gaps = 13/185 (7%)

Query: 20   DAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKSLAGSSGPGAS-SGTSGDHG 78
            +AER+   +M+   A A R +   + + R  ARA E+ Q+    +   G     T     
Sbjct: 2347 EAERQRQLEMS---AEAERLKLRVAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTELATQ 2403

Query: 79   ELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSPGHRATAPQTQHVSPMRQV 138
            E V  + +LE++ Q      + L++AI++LE     L++ +   +  + + Q V   + +
Sbjct: 2404 EKVTLVQTLEIQRQQSDHDAERLREAIAELEREKEKLQQEAKLLQLKSEEMQTVQQEQLL 2463

Query: 139  -EPPAKKPATPAEDDEDDDIDLFGSDN--------EEEDKEAAQLREERLRQYAEKKAKK 189
             E  A + +  +E D     + F            ++E  +A QLREE+ RQ  + + ++
Sbjct: 2464 QETQALQQSFLSEKDSLLQRERFIEQEKAKLEQLFQDEVAKAQQLREEQQRQQQQMEQER 2523

Query: 190  PALVA 194
              LVA
Sbjct: 2524 QRLVA 2528


>gi|41322912 plectin 1 isoform 2 [Homo sapiens]
          Length = 4533

 Score = 34.3 bits (77), Expect = 0.13
 Identities = 45/185 (24%), Positives = 84/185 (45%), Gaps = 13/185 (7%)

Query: 20   DAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKSLAGSSGPGAS-SGTSGDHG 78
            +AER+   +M+   A A R +   + + R  ARA E+ Q+    +   G     T     
Sbjct: 2355 EAERQRQLEMS---AEAERLKLRVAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTELATQ 2411

Query: 79   ELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSPGHRATAPQTQHVSPMRQV 138
            E V  + +LE++ Q      + L++AI++LE     L++ +   +  + + Q V   + +
Sbjct: 2412 EKVTLVQTLEIQRQQSDHDAERLREAIAELEREKEKLQQEAKLLQLKSEEMQTVQQEQLL 2471

Query: 139  -EPPAKKPATPAEDDEDDDIDLFGSDN--------EEEDKEAAQLREERLRQYAEKKAKK 189
             E  A + +  +E D     + F            ++E  +A QLREE+ RQ  + + ++
Sbjct: 2472 QETQALQQSFLSEKDSLLQRERFIEQEKAKLEQLFQDEVAKAQQLREEQQRQQQQMEQER 2531

Query: 190  PALVA 194
              LVA
Sbjct: 2532 QRLVA 2536


>gi|47607492 plectin 1 isoform 1 [Homo sapiens]
          Length = 4574

 Score = 34.3 bits (77), Expect = 0.13
 Identities = 45/185 (24%), Positives = 84/185 (45%), Gaps = 13/185 (7%)

Query: 20   DAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKSLAGSSGPGAS-SGTSGDHG 78
            +AER+   +M+   A A R +   + + R  ARA E+ Q+    +   G     T     
Sbjct: 2396 EAERQRQLEMS---AEAERLKLRVAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTELATQ 2452

Query: 79   ELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSPGHRATAPQTQHVSPMRQV 138
            E V  + +LE++ Q      + L++AI++LE     L++ +   +  + + Q V   + +
Sbjct: 2453 EKVTLVQTLEIQRQQSDHDAERLREAIAELEREKEKLQQEAKLLQLKSEEMQTVQQEQLL 2512

Query: 139  -EPPAKKPATPAEDDEDDDIDLFGSDN--------EEEDKEAAQLREERLRQYAEKKAKK 189
             E  A + +  +E D     + F            ++E  +A QLREE+ RQ  + + ++
Sbjct: 2513 QETQALQQSFLSEKDSLLQRERFIEQEKAKLEQLFQDEVAKAQQLREEQQRQQQQMEQER 2572

Query: 190  PALVA 194
              LVA
Sbjct: 2573 QRLVA 2577


>gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens]
          Length = 770

 Score = 33.9 bits (76), Expect = 0.16
 Identities = 24/109 (22%), Positives = 54/109 (49%), Gaps = 2/109 (1%)

Query: 90  ENQSLRGVVQELQQAISKLEARLNVLEKSSPGHRATAPQTQHVSPMRQVEPPAKKPATPA 149
           E    R ++ +LQ  IS  E + +  E SS    + + + +      + E    + +   
Sbjct: 243 EKMEERDLLSDLQD-ISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEE 301

Query: 150 EDDEDDDIDLFGSDNEEEDKEAA-QLREERLRQYAEKKAKKPALVAKSS 197
           E++E+++ +  GS++EE  +++A ++ EE + +  E++ +   LV   S
Sbjct: 302 EEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEERENENHLLVVPES 350


>gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens]
          Length = 780

 Score = 33.9 bits (76), Expect = 0.16
 Identities = 24/109 (22%), Positives = 54/109 (49%), Gaps = 2/109 (1%)

Query: 90  ENQSLRGVVQELQQAISKLEARLNVLEKSSPGHRATAPQTQHVSPMRQVEPPAKKPATPA 149
           E    R ++ +LQ  IS  E + +  E SS    + + + +      + E    + +   
Sbjct: 253 EKMEERDLLSDLQD-ISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEE 311

Query: 150 EDDEDDDIDLFGSDNEEEDKEAA-QLREERLRQYAEKKAKKPALVAKSS 197
           E++E+++ +  GS++EE  +++A ++ EE + +  E++ +   LV   S
Sbjct: 312 EEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEERENENHLLVVPES 360


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.312    0.130    0.361 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,678,268
Number of Sequences: 37866
Number of extensions: 488703
Number of successful extensions: 4599
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 261
Number of HSP's that attempted gapping in prelim test: 3962
Number of HSP's gapped (non-prelim): 750
length of query: 281
length of database: 18,247,518
effective HSP length: 101
effective length of query: 180
effective length of database: 14,423,052
effective search space: 2596149360
effective search space used: 2596149360
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 61 (28.1 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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