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Search of human proteins with 254039600
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|254039600 F-box and leucine-rich repeat protein 17 [Homo
sapiens]
(303 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|254039600 F-box and leucine-rich repeat protein 17 [Homo sapi... 614 e-176
gi|22748931 F-box and leucine-rich repeat protein 14 [Homo sapiens] 111 9e-25
gi|6912466 F-box and leucine-rich repeat protein 7 [Homo sapiens] 95 9e-20
gi|16306582 F-box and leucine-rich repeat protein 2 [Homo sapiens] 93 3e-19
gi|27734755 F-box and leucine-rich repeat protein 20 [Homo sapiens] 90 2e-18
gi|161333852 F-box and leucine-rich repeat protein 13 isoform 1 ... 82 6e-16
gi|161333854 F-box and leucine-rich repeat protein 13 isoform 2 ... 76 4e-14
gi|164663798 antagonist of mitotic exit network 1 homolog [Homo ... 74 2e-13
gi|190194416 F-box and leucine-rich repeat protein 15 [Homo sapi... 66 3e-11
gi|16306588 F-box and leucine-rich repeat protein 4 [Homo sapiens] 63 3e-10
gi|24025682 F-box and leucine-rich repeat protein 16 [Homo sapiens] 59 4e-09
gi|51873034 F-box and leucine-rich repeat protein 9 [Homo sapiens] 48 9e-06
gi|16306591 F-box and leucine-rich repeat protein 9 [Homo sapiens] 48 9e-06
gi|16306580 F-box and leucine-rich repeat protein 11 [Homo sapiens] 41 0.001
gi|54112380 F-box and leucine-rich repeat protein 10 isoform b [... 41 0.001
gi|5453880 acidic (leucine-rich) nuclear phosphoprotein 32 famil... 40 0.003
gi|54112382 F-box and leucine-rich repeat protein 10 isoform a [... 40 0.003
gi|13569879 acidic (leucine-rich) nuclear phosphoprotein 32 fami... 37 0.022
gi|210147571 acidic (leucine-rich) nuclear phosphoprotein 32 fam... 37 0.022
gi|28827813 NLR family, pyrin domain containing 14 [Homo sapiens] 36 0.048
gi|6912604 acidic nuclear phosphoprotein 32C [Homo sapiens] 35 0.11
gi|8923179 F-box and leucine-rich repeat protein 12 [Homo sapiens] 34 0.18
gi|16306584 F-box and leucine-rich repeat protein 3 [Homo sapiens] 33 0.24
gi|116268109 nucleotide-binding oligomerization domains 27 [Homo... 33 0.41
gi|55742693 zyg-11 homolog B [Homo sapiens] 32 0.53
gi|16306574 F-box and leucine-rich repeat protein 5 isoform 2 [H... 32 0.91
gi|16306572 F-box and leucine-rich repeat protein 5 isoform 1 [H... 32 0.91
gi|16306576 F-box and leucine-rich repeat protein 6 isoform 1 [H... 32 0.91
gi|239754160 PREDICTED: similar to hCG1980490 [Homo sapiens] 31 1.5
gi|239748674 PREDICTED: similar to hCG1980490 [Homo sapiens] 31 1.5
>gi|254039600 F-box and leucine-rich repeat protein 17 [Homo
sapiens]
Length = 303
Score = 614 bits (1584), Expect = e-176
Identities = 303/303 (100%), Positives = 303/303 (100%)
Query: 1 MSDNGVCVLAFKCPGLLRYTAYRCKQLSDTSIIAVASHCPLLQKVHVGNQDKLTDEGLKQ 60
MSDNGVCVLAFKCPGLLRYTAYRCKQLSDTSIIAVASHCPLLQKVHVGNQDKLTDEGLKQ
Sbjct: 1 MSDNGVCVLAFKCPGLLRYTAYRCKQLSDTSIIAVASHCPLLQKVHVGNQDKLTDEGLKQ 60
Query: 61 LGSKCRELKDIHFGQCYKISDEGMIVIAKGCLKLQRIYMQENKLVTDQSVKAFAEHCPEL 120
LGSKCRELKDIHFGQCYKISDEGMIVIAKGCLKLQRIYMQENKLVTDQSVKAFAEHCPEL
Sbjct: 61 LGSKCRELKDIHFGQCYKISDEGMIVIAKGCLKLQRIYMQENKLVTDQSVKAFAEHCPEL 120
Query: 121 QYVGFMGCSVTSKGVIHLTKLRNLSSLDLRHITELDNETVMEIVKRCKNLSSLNLCLNWI 180
QYVGFMGCSVTSKGVIHLTKLRNLSSLDLRHITELDNETVMEIVKRCKNLSSLNLCLNWI
Sbjct: 121 QYVGFMGCSVTSKGVIHLTKLRNLSSLDLRHITELDNETVMEIVKRCKNLSSLNLCLNWI 180
Query: 181 INDRCVEVIAKEGQNLKELYLVSCKITDYALIAIGRYSMTIETVDVGWCKEITDQGATLI 240
INDRCVEVIAKEGQNLKELYLVSCKITDYALIAIGRYSMTIETVDVGWCKEITDQGATLI
Sbjct: 181 INDRCVEVIAKEGQNLKELYLVSCKITDYALIAIGRYSMTIETVDVGWCKEITDQGATLI 240
Query: 241 AQSSKSLRYLGLMRCDKVNEVTVEQLVQQYPHITFSTVLQDCKRTLERAYQMGWTPNMSA 300
AQSSKSLRYLGLMRCDKVNEVTVEQLVQQYPHITFSTVLQDCKRTLERAYQMGWTPNMSA
Sbjct: 241 AQSSKSLRYLGLMRCDKVNEVTVEQLVQQYPHITFSTVLQDCKRTLERAYQMGWTPNMSA 300
Query: 301 ASS 303
ASS
Sbjct: 301 ASS 303
>gi|22748931 F-box and leucine-rich repeat protein 14 [Homo sapiens]
Length = 418
Score = 111 bits (277), Expect = 9e-25
Identities = 74/277 (26%), Positives = 142/277 (51%), Gaps = 9/277 (3%)
Query: 1 MSDNGVCVLAFKCPGLLR-YTAYRCKQLSDTSIIAVASHCPLLQKVHVGNQDKLTDEGLK 59
++DNG+ + G LR CKQ++D+S+ +A + L+ + +G +T+ GL
Sbjct: 103 LTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGLEVLELGGCSNITNTGLL 162
Query: 60 QLGSKCRELKDIHFGQCYKISDEGMIVIA-------KGCLKLQRIYMQENKLVTDQSVKA 112
+ + LK ++ C +SD G+ +A +GCL L+++ +Q+ + +TD S+K
Sbjct: 163 LIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLEQLTLQDCQKLTDLSLKH 222
Query: 113 FAEHCPELQYVGFMGCS-VTSKGVIHLTKLRNLSSLDLRHITELDNETVMEIVKRCKNLS 171
+ L+ + C ++ G++HL+ + +L SL+LR + + +M + LS
Sbjct: 223 ISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLS 282
Query: 172 SLNLCLNWIINDRCVEVIAKEGQNLKELYLVSCKITDYALIAIGRYSMTIETVDVGWCKE 231
L++ + D+ + IA+ LK L L SC I+D + + R + T+++G C
Sbjct: 283 GLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVR 342
Query: 232 ITDQGATLIAQSSKSLRYLGLMRCDKVNEVTVEQLVQ 268
ITD+G LIA+ L + L C ++ + +E++ Q
Sbjct: 343 ITDKGLELIAEHLSQLTGIDLYGCTRITKRGLERITQ 379
>gi|6912466 F-box and leucine-rich repeat protein 7 [Homo sapiens]
Length = 491
Score = 94.7 bits (234), Expect = 9e-20
Identities = 71/277 (25%), Positives = 125/277 (45%), Gaps = 15/277 (5%)
Query: 1 MSDNGVCVLAFKCPGLLRYTAYRCKQLSDTSIIAVASHCPLLQKVHVGNQDKLT------ 54
++D G+ +A CP L R C +S+ ++ V S CP L+ + V K+T
Sbjct: 199 LTDRGLYTIAQCCPELRRLEVSGCYNISNEAVFDVVSLCPNLEHLDVSGCSKVTCISLTR 258
Query: 55 --DEGLKQLGSKCRELKDIHFGQCYKISDEGMIVIAKGCLKLQRIYMQENKLVTDQSVKA 112
L L K ++ + C+ + DEG+ IA C +L +Y++ +TD+ ++
Sbjct: 259 EASIKLSPLHGKQISIRYLDMTDCFVLEDEGLHTIAAHCTQLTHLYLRRCVRLTDEGLRY 318
Query: 113 FAEHCPELQYVGFMGCS-VTSKGVIHLTKLRN-LSSLDLRHITELDNETVMEIVKRCKNL 170
+C ++ + C V+ G+ + KL + L L + H + + + + K C L
Sbjct: 319 LVIYCASIKELSVSDCRFVSDFGLREIAKLESRLRYLSIAHCGRVTDVGIRYVAKYCSKL 378
Query: 171 SSLNLCLNWIINDRCVEVIAKEGQNLKELYLVSCK-ITDYALIAIGRYSMTIETVDVGWC 229
LN I D VE +AK LK L + C ++D L + ++ + + C
Sbjct: 379 RYLNARGCEGITDHGVEYLAKNCTKLKSLDIGKCPLVSDTGLECLALNCFNLKRLSLKSC 438
Query: 230 KEITDQGATLIAQSSKSLRYLGLMRCDKVNEVTVEQL 266
+ IT QG ++A + L+ L + C EV+VE L
Sbjct: 439 ESITGQGLQIVAANCFDLQTLNVQDC----EVSVEAL 471
Score = 82.4 bits (202), Expect = 4e-16
Identities = 55/196 (28%), Positives = 100/196 (51%), Gaps = 2/196 (1%)
Query: 24 CKQLSDTSIIAVASHCPLLQKVHVGNQDKLTDEGLKQLGSKCRELKDIHFGQCYKISDEG 83
C L D + +A+HC L +++ +LTDEGL+ L C +K++ C +SD G
Sbjct: 282 CFVLEDEGLHTIAAHCTQLTHLYLRRCVRLTDEGLRYLVIYCASIKELSVSDCRFVSDFG 341
Query: 84 MIVIAKGCLKLQRIYMQENKLVTDQSVKAFAEHCPELQYVGFMGC-SVTSKGVIHLTK-L 141
+ IAK +L+ + + VTD ++ A++C +L+Y+ GC +T GV +L K
Sbjct: 342 LREIAKLESRLRYLSIAHCGRVTDVGIRYVAKYCSKLRYLNARGCEGITDHGVEYLAKNC 401
Query: 142 RNLSSLDLRHITELDNETVMEIVKRCKNLSSLNLCLNWIINDRCVEVIAKEGQNLKELYL 201
L SLD+ + + + + C NL L+L I + ++++A +L+ L +
Sbjct: 402 TKLKSLDIGKCPLVSDTGLECLALNCFNLKRLSLKSCESITGQGLQIVAANCFDLQTLNV 461
Query: 202 VSCKITDYALIAIGRY 217
C+++ AL + R+
Sbjct: 462 QDCEVSVEALRFVKRH 477
Score = 80.9 bits (198), Expect = 1e-15
Identities = 59/239 (24%), Positives = 109/239 (45%), Gaps = 11/239 (4%)
Query: 39 CPLLQKVHVGNQDKLTDEGLKQLGSKCRELKDIHFGQCYKISDEGMIVIAKGCLKLQRIY 98
C +L+ V V +LTD GL + C EL+ + CY IS+E + + C L+ +
Sbjct: 185 CLMLETVTVSGCRRLTDRGLYTIAQCCPELRRLEVSGCYNISNEAVFDVVSLCPNLEHLD 244
Query: 99 MQENKLVT------DQSVKAFAEHCPE--LQYVGFMGCSVTSKGVIH--LTKLRNLSSLD 148
+ VT + S+K H + ++Y+ C V +H L+ L
Sbjct: 245 VSGCSKVTCISLTREASIKLSPLHGKQISIRYLDMTDCFVLEDEGLHTIAAHCTQLTHLY 304
Query: 149 LRHITELDNETVMEIVKRCKNLSSLNLCLNWIINDRCVEVIAKEGQNLKELYLVSC-KIT 207
LR L +E + +V C ++ L++ ++D + IAK L+ L + C ++T
Sbjct: 305 LRRCVRLTDEGLRYLVIYCASIKELSVSDCRFVSDFGLREIAKLESRLRYLSIAHCGRVT 364
Query: 208 DYALIAIGRYSMTIETVDVGWCKEITDQGATLIAQSSKSLRYLGLMRCDKVNEVTVEQL 266
D + + +Y + ++ C+ ITD G +A++ L+ L + +C V++ +E L
Sbjct: 365 DVGIRYVAKYCSKLRYLNARGCEGITDHGVEYLAKNCTKLKSLDIGKCPLVSDTGLECL 423
Score = 76.6 bits (187), Expect = 2e-14
Identities = 51/215 (23%), Positives = 101/215 (46%), Gaps = 11/215 (5%)
Query: 65 CRELKDIHFGQCYKISDEGMIVIAKGCLKLQRIYMQENKLVTDQSVKAFAEHCPELQYVG 124
C L+ + C +++D G+ IA+ C +L+R+ + +++++V CP L+++
Sbjct: 185 CLMLETVTVSGCRRLTDRGLYTIAQCCPELRRLEVSGCYNISNEAVFDVVSLCPNLEHLD 244
Query: 125 FMGCS------VTSKGVIHLTKLR----NLSSLDLRHITELDNETVMEIVKRCKNLSSLN 174
GCS +T + I L+ L ++ LD+ L++E + I C L+ L
Sbjct: 245 VSGCSKVTCISLTREASIKLSPLHGKQISIRYLDMTDCFVLEDEGLHTIAAHCTQLTHLY 304
Query: 175 LCLNWIINDRCVEVIAKEGQNLKELYLVSCK-ITDYALIAIGRYSMTIETVDVGWCKEIT 233
L + D + + ++KEL + C+ ++D+ L I + + + + C +T
Sbjct: 305 LRRCVRLTDEGLRYLVIYCASIKELSVSDCRFVSDFGLREIAKLESRLRYLSIAHCGRVT 364
Query: 234 DQGATLIAQSSKSLRYLGLMRCDKVNEVTVEQLVQ 268
D G +A+ LRYL C+ + + VE L +
Sbjct: 365 DVGIRYVAKYCSKLRYLNARGCEGITDHGVEYLAK 399
Score = 36.2 bits (82), Expect = 0.037
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 219 MTIETVDVGWCKEITDQGATLIAQSSKSLRYLGLMRCDKVNEVTVEQLVQQYPHI 273
+ +ETV V C+ +TD+G IAQ LR L + C ++ V +V P++
Sbjct: 186 LMLETVTVSGCRRLTDRGLYTIAQCCPELRRLEVSGCYNISNEAVFDVVSLCPNL 240
>gi|16306582 F-box and leucine-rich repeat protein 2 [Homo sapiens]
Length = 423
Score = 93.2 bits (230), Expect = 3e-19
Identities = 68/264 (25%), Positives = 116/264 (43%), Gaps = 26/264 (9%)
Query: 12 KCPGLLRYTAYR-CKQLSDTSIIAVASHCPLLQKVHVGNQDKLTDEGLKQLGSKCRELKD 70
+C G LR + R C + D+S+ A +C ++ +++ K+TD L C +LK
Sbjct: 75 RCGGFLRKLSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKH 134
Query: 71 IHFGQCYKISDEGMIVIAKGCLKLQRIYMQENKLVTDQSVKAFAEHCPELQYVGFMGCSV 130
+ C I++ + I++GC L+ + + +T ++A C
Sbjct: 135 LDLTSCVSITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVRGC------------- 181
Query: 131 TSKGVIHLTKLRNLSSLDLRHITELDNETVMEIVKRCKNLSSLNLCLNWIINDRCVEVIA 190
R L +L LR T+L++E + I C L SLNL I D V I
Sbjct: 182 -----------RGLKALLLRGCTQLEDEALKHIQNYCHELVSLNLQSCSRITDEGVVQIC 230
Query: 191 KEGQNLKELYLVSC-KITDYALIAIGRYSMTIETVDVGWCKEITDQGATLIAQSSKSLRY 249
+ L+ L L C +TD +L A+G ++ ++ C +TD G TL+A++ L
Sbjct: 231 RGCHRLQALCLSGCSNLTDASLTALGLNCPRLQILEAARCSHLTDAGFTLLARNCHELEK 290
Query: 250 LGLMRCDKVNEVTVEQLVQQYPHI 273
+ L C + + T+ QL P +
Sbjct: 291 MDLEECILITDSTLIQLSIHCPKL 314
Score = 90.9 bits (224), Expect = 1e-18
Identities = 60/272 (22%), Positives = 130/272 (47%), Gaps = 6/272 (2%)
Query: 1 MSDNGVCVLAFKCPGLLRYTAYRCKQLSDTSIIAVASHCPLLQKVHVGNQDKLTDEGLKQ 60
+ D+ + A C + C +++D++ +++ C L+ + + + +T+ LK
Sbjct: 91 VGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSITNSSLKG 150
Query: 61 LGSKCRELKDIHFGQCYKISDEGMIVIAKGCLKLQRIYMQENKLVTDQSVKAFAEHCPEL 120
+ CR L+ ++ C +I+ +G+ + +GC L+ + ++ + D+++K +C EL
Sbjct: 151 ISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKHIQNYCHEL 210
Query: 121 QYVGFMGCS-VTSKGVIHLTK-LRNLSSLDLRHITELDNETVMEIVKRCKNLSSLNLCLN 178
+ CS +T +GV+ + + L +L L + L + ++ + C L L
Sbjct: 211 VSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQILEAARC 270
Query: 179 WIINDRCVEVIAKEGQNLKELYLVSC-KITDYALIAIGRYSMTIETVDVGWCKEITDQGA 237
+ D ++A+ L+++ L C ITD LI + + ++ + + C+ ITD G
Sbjct: 271 SHLTDAGFTLLARNCHELEKMDLEECILITDSTLIQLSIHCPKLQALSLSHCELITDDGI 330
Query: 238 TLIAQSS---KSLRYLGLMRCDKVNEVTVEQL 266
++ S+ + LR L L C + +V +E L
Sbjct: 331 LHLSNSTCGHERLRVLELDNCLLITDVALEHL 362
Score = 83.6 bits (205), Expect = 2e-16
Identities = 44/169 (26%), Positives = 85/169 (50%), Gaps = 8/169 (4%)
Query: 13 CPGLLRYTAYRCKQLSDTSIIAVASHCPLLQKVHVGNQDKLTDEGLKQLGSKCRELKDIH 72
C L+ C +++D ++ + C LQ + + LTD L LG C L+ +
Sbjct: 207 CHELVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQILE 266
Query: 73 FGQCYKISDEGMIVIAKGCLKLQRIYMQENKLVTDQSVKAFAEHCPELQYVGFMGCS-VT 131
+C ++D G ++A+ C +L+++ ++E L+TD ++ + HCP+LQ + C +T
Sbjct: 267 AARCSHLTDAGFTLLARNCHELEKMDLEECILITDSTLIQLSIHCPKLQALSLSHCELIT 326
Query: 132 SKGVIHLTKLRNLSSLDLRHITELDN-----ETVMEIVKRCKNLSSLNL 175
G++HL+ + + + ELDN + +E ++ C+ L L L
Sbjct: 327 DDGILHLS--NSTCGHERLRVLELDNCLLITDVALEHLENCRGLERLEL 373
Score = 82.0 bits (201), Expect = 6e-16
Identities = 60/219 (27%), Positives = 109/219 (49%), Gaps = 7/219 (3%)
Query: 24 CKQLSDTSIIAVASHCPLLQKVHVGNQDKLTDEGLKQLGSKCRELKDIHFGQCYKISDEG 83
C Q++ I A+ C L+ + + +L DE LK + + C EL ++ C +I+DEG
Sbjct: 166 CDQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKHIQNYCHELVSLNLQSCSRITDEG 225
Query: 84 MIVIAKGCLKLQRIYMQENKLVTDQSVKAFAEHCPELQYVGFMGCS-VTSKGVIHLTK-L 141
++ I +GC +LQ + + +TD S+ A +CP LQ + CS +T G L +
Sbjct: 226 VVQICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQILEAARCSHLTDAGFTLLARNC 285
Query: 142 RNLSSLDLRHITELDNETVMEIVKRCKNLSSLNLCLNWIINDRCVEVIAKE---GQNLKE 198
L +DL + + T++++ C L +L+L +I D + ++ + L+
Sbjct: 286 HELEKMDLEECILITDSTLIQLSIHCPKLQALSLSHCELITDDGILHLSNSTCGHERLRV 345
Query: 199 LYLVSC-KITDYALIAIGRYSMTIETVDVGWCKEITDQG 236
L L +C ITD AL + +E +++ C+++T G
Sbjct: 346 LELDNCLLITDVALEHL-ENCRGLERLELYDCQQVTRAG 383
Score = 65.9 bits (159), Expect = 4e-11
Identities = 42/153 (27%), Positives = 68/153 (44%), Gaps = 4/153 (2%)
Query: 1 MSDNGVCVLAFKCPGLLRYTAYRCKQLSDTSIIAVASHCPLLQKVHVGNQDKLTDEGLKQ 60
++D GV + C L C L+D S+ A+ +CP LQ + LTD G
Sbjct: 221 ITDEGVVQICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQILEAARCSHLTDAGFTL 280
Query: 61 LGSKCRELKDIHFGQCYKISDEGMIVIAKGCLKLQRIYMQENKLVTDQSVKAFAEHC--- 117
L C EL+ + +C I+D +I ++ C KLQ + + +L+TD + +
Sbjct: 281 LARNCHELEKMDLEECILITDSTLIQLSIHCPKLQALSLSHCELITDDGILHLSNSTCGH 340
Query: 118 PELQYVGFMGC-SVTSKGVIHLTKLRNLSSLDL 149
L+ + C +T + HL R L L+L
Sbjct: 341 ERLRVLELDNCLLITDVALEHLENCRGLERLEL 373
>gi|27734755 F-box and leucine-rich repeat protein 20 [Homo sapiens]
Length = 436
Score = 90.1 bits (222), Expect = 2e-18
Identities = 61/229 (26%), Positives = 111/229 (48%), Gaps = 5/229 (2%)
Query: 13 CPGLLRYTAYRCKQLSDTSIIAVASHCPLLQKVHVGNQDKLTDEGLKQLGSKCRELKDIH 72
CP L + C Q++ I A+ C L+ + + +L DE LK +G+ C EL ++
Sbjct: 168 CPLLEQLNISWCDQVTKDGIQALVRGCGGLKALFLKGCTQLEDEALKYIGAHCPELVTLN 227
Query: 73 FGQCYKISDEGMIVIAKGCLKLQRIYMQENKLVTDQSVKAFAEHCPELQYVGFMGCS-VT 131
C +I+DEG+I I +GC KLQ + +TD + A ++CP L+ + CS +T
Sbjct: 228 LQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLT 287
Query: 132 SKGVIHLTK-LRNLSSLDLRHITELDNETVMEIVKRCKNLSSLNLCLNWIINDRCVEVI- 189
G L + L +DL ++ + T++++ C L L+L +I D + +
Sbjct: 288 DVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGIRHLG 347
Query: 190 --AKEGQNLKELYLVSCKITDYALIAIGRYSMTIETVDVGWCKEITDQG 236
A L+ + L +C + A + + ++E +++ C++IT G
Sbjct: 348 NGACAHDQLEVIELDNCPLITDASLEHLKSCHSLERIELYDCQQITRAG 396
Score = 86.3 bits (212), Expect = 3e-17
Identities = 61/290 (21%), Positives = 132/290 (45%), Gaps = 8/290 (2%)
Query: 1 MSDNGVCVLAFKCPGLLRYTAYRCKQLSDTSIIAVASHCPLLQKVHVGNQDKLTDEGLKQ 60
+ DN + A C + C + +D + +++ C L+ + + + +T+ LK
Sbjct: 104 VGDNALRTFAQNCRNIEVLNLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLKA 163
Query: 61 LGSKCRELKDIHFGQCYKISDEGMIVIAKGCLKLQRIYMQENKLVTDQSVKAFAEHCPEL 120
L C L+ ++ C +++ +G+ + +GC L+ ++++ + D+++K HCPEL
Sbjct: 164 LSEGCPLLEQLNISWCDQVTKDGIQALVRGCGGLKALFLKGCTQLEDEALKYIGAHCPEL 223
Query: 121 QYVGFMGC-SVTSKGVIHLTK-LRNLSSLDLRHITELDNETVMEIVKRCKNLSSLNLCLN 178
+ C +T +G+I + + L SL + + + + + + C L L +
Sbjct: 224 VTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARC 283
Query: 179 WIINDRCVEVIAKEGQNLKELYLVSC-KITDYALIAIGRYSMTIETVDVGWCKEITDQGA 237
+ D +A+ L+++ L C +ITD LI + + ++ + + C+ ITD G
Sbjct: 284 SQLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGI 343
Query: 238 TLI---AQSSKSLRYLGLMRCDKVNEVTVEQLVQQYPHITFSTVLQDCKR 284
+ A + L + L C + + ++E L + H L DC++
Sbjct: 344 RHLGNGACAHDQLEVIELDNCPLITDASLEHL--KSCHSLERIELYDCQQ 391
Score = 85.5 bits (210), Expect = 5e-17
Identities = 62/264 (23%), Positives = 114/264 (43%), Gaps = 26/264 (9%)
Query: 12 KCPGLLRYTAYR-CKQLSDTSIIAVASHCPLLQKVHVGNQDKLTDEGLKQLGSKCRELKD 70
+C G LR + R C + D ++ A +C ++ +++ K TD L C +L+
Sbjct: 88 RCGGFLRKLSLRGCLGVGDNALRTFAQNCRNIEVLNLNGCTKTTDATCTSLSKFCSKLRH 147
Query: 71 IHFGQCYKISDEGMIVIAKGCLKLQRIYMQENKLVTDQSVKAFAEHCPELQYVGFMGCSV 130
+ C I++ + +++GC L+++ + VT ++A C L+ + GC
Sbjct: 148 LDLASCTSITNMSLKALSEGCPLLEQLNISWCDQVTKDGIQALVRGCGGLKALFLKGC-- 205
Query: 131 TSKGVIHLTKLRNLSSLDLRHITELDNETVMEIVKRCKNLSSLNLCLNWIINDRCVEVIA 190
T+L++E + I C L +LNL I D + I
Sbjct: 206 ----------------------TQLEDEALKYIGAHCPELVTLNLQTCLQITDEGLITIC 243
Query: 191 KEGQNLKELYLVSC-KITDYALIAIGRYSMTIETVDVGWCKEITDQGATLIAQSSKSLRY 249
+ L+ L C ITD L A+G+ + ++V C ++TD G T +A++ L
Sbjct: 244 RGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFTTLARNCHELEK 303
Query: 250 LGLMRCDKVNEVTVEQLVQQYPHI 273
+ L C ++ + T+ QL P +
Sbjct: 304 MDLEECVQITDSTLIQLSIHCPRL 327
Score = 62.0 bits (149), Expect = 6e-10
Identities = 34/124 (27%), Positives = 66/124 (53%), Gaps = 4/124 (3%)
Query: 1 MSDNGVCVLAFKCPGLLRYTAYRCKQLSDTSIIAVASHCPLLQKVHVGNQDKLTDEGLKQ 60
++D G LA C L + C Q++D+++I ++ HCP LQ + + + + +TD+G++
Sbjct: 286 LTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGIRH 345
Query: 61 LGSKC---RELKDIHFGQCYKISDEGMIVIAKGCLKLQRIYMQENKLVTDQSVKAFAEHC 117
LG+ +L+ I C I+D + + K C L+RI + + + +T +K H
Sbjct: 346 LGNGACAHDQLEVIELDNCPLITDASLEHL-KSCHSLERIELYDCQQITRAGIKRLRTHL 404
Query: 118 PELQ 121
P ++
Sbjct: 405 PNIK 408
>gi|161333852 F-box and leucine-rich repeat protein 13 isoform 1
[Homo sapiens]
Length = 735
Score = 82.0 bits (201), Expect = 6e-16
Identities = 80/316 (25%), Positives = 134/316 (42%), Gaps = 57/316 (18%)
Query: 13 CPGLLRYTAYRCKQLSDTSIIAVASHCPLLQKVHVGNQDKLTDEGLKQLGSKCRELKDIH 72
C L+ C Q+S +A+ C + + + + LTD +K L KC + +
Sbjct: 323 CHKLIYLDLSGCTQISVQGFRYIANSCTGIMHLTINDMPTLTDNCVKALVEKCSRITSLV 382
Query: 73 FGQCYKISDEGMIVIAKGCLKLQRIYMQENKLVTDQSVKAFAEHCPELQYVGFMGCS-VT 131
F ISD A KL++I + NK VTD S K ++ P L ++ C +T
Sbjct: 383 FTGAPHISD--CTFRALSACKLRKIRFEGNKRVTDASFKFIDKNYPNLSHIYMADCKGIT 440
Query: 132 SKGVIHLTKLRNLS----------------------------SLDLRHITELDNETVMEI 163
+ L+ L+ L+ L+L + L + +VM++
Sbjct: 441 DSSLRSLSPLKQLTVLNLANCVRIGDMGLKQFLDGPASMRIRELNLSNCVRLSDASVMKL 500
Query: 164 VKRCKNLSSLNL--C-------LNWIIN-------DRCVEVIAKEGQN-------LKELY 200
+RC NL+ L+L C + +I+N D I+ EG N LKEL
Sbjct: 501 SERCPNLNYLSLRNCEHLTAQGIGYIVNIFSLVSIDLSGTDISNEGLNVLSRHKKLKELS 560
Query: 201 LVSC-KITDYALIAIGRYSMTIETVDVGWCKEITDQGATLIAQSSKSLRYLGLMRCDKVN 259
+ C +ITD + A + S+ +E +DV +C +++D +A +L L + C K+
Sbjct: 561 VSECYRITDDGIQAFCKSSLILEHLDVSYCSQLSDMIIKALAIYCINLTSLSIAGCPKIT 620
Query: 260 EVTVEQLVQQ--YPHI 273
+ +E L + Y HI
Sbjct: 621 DSAMEMLSAKCHYLHI 636
Score = 77.4 bits (189), Expect = 1e-14
Identities = 64/283 (22%), Positives = 126/283 (44%), Gaps = 36/283 (12%)
Query: 25 KQLSDTSIIAVASHCPLLQKVHVGNQDKLTDEGLKQLGSKCRELKDIHFGQCYKISDEGM 84
K+++D S + + P L +++ + +TD L+ L S ++L ++ C +I D G+
Sbjct: 411 KRVTDASFKFIDKNYPNLSHIYMADCKGITDSSLRSL-SPLKQLTVLNLANCVRIGDMGL 469
Query: 85 IVIAKG--CLKLQRIYMQENKLVTDQSVKAFAEHCPELQYVGFMGCS-VTSKGVIHLTKL 141
G ++++ + + ++D SV +E CP L Y+ C +T++G+ ++ +
Sbjct: 470 KQFLDGPASMRIRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNI 529
Query: 142 RNLSSLDLRHITELDNETVMEIVKRCKNLSSLNLCLNWIINDRCVEVIAKEGQ------- 194
+L S+DL T++ NE + ++ R K L L++ + I D ++ K
Sbjct: 530 FSLVSIDLSG-TDISNEG-LNVLSRHKKLKELSVSECYRITDDGIQAFCKSSLILEHLDV 587
Query: 195 -------------------NLKELYLVSC-KITDYALIAIGRYSMTIETVDVGWCKEITD 234
NL L + C KITD A+ + + +D+ C +TD
Sbjct: 588 SYCSQLSDMIIKALAIYCINLTSLSIAGCPKITDSAMEMLSAKCHYLHILDISGCVLLTD 647
Query: 235 QGATLIAQSSKSLRYLGLMRCDKVNEVTVEQL---VQQYPHIT 274
Q + K LR L + C +++ +++ VQQ + T
Sbjct: 648 QILEDLQIGCKQLRILKMQYCTNISKKAAQRMSSKVQQQEYNT 690
Score = 75.9 bits (185), Expect = 4e-14
Identities = 72/281 (25%), Positives = 122/281 (43%), Gaps = 44/281 (15%)
Query: 13 CPGLLRYTAYRCKQLSDTSII-----AVASHCPLLQKVHVGNQDKLTDEGLK--QLGSKC 65
CPG+L C LS+T+I + H LQ + + + TD+GL+ LG+ C
Sbjct: 270 CPGVL------CLNLSNTTITNRTMRLLPRHFHNLQNLSLAYCRRFTDKGLQYLNLGNGC 323
Query: 66 RELKDIHFGQCYKISDEGMIVIAKGCLKLQRIYMQENKLVTDQSVKAFAEHCPELQYVGF 125
+L + C +IS +G IA C + + + + +TD VKA E C + + F
Sbjct: 324 HKLIYLDLSGCTQISVQGFRYIANSCTGIMHLTINDMPTLTDNCVKALVEKCSRITSLVF 383
Query: 126 MGCSVTSKGVIHLTKLRNLSSLDLRHITELDNETVMEIVKRCKNLSSLNLCLNWIINDRC 185
G S R LS+ LR I N+ V D
Sbjct: 384 TGAPHISD-----CTFRALSACKLRKIRFEGNKRV---------------------TDAS 417
Query: 186 VEVIAKEGQNLKELYLVSCK-ITDYALIAIGRYSMTIETVDVGWCKEITDQGAT--LIAQ 242
+ I K NL +Y+ CK ITD +L ++ + +++ C I D G L
Sbjct: 418 FKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQ-LTVLNLANCVRIGDMGLKQFLDGP 476
Query: 243 SSKSLRYLGLMRCDKVNEVTVEQLVQQYPHITFSTVLQDCK 283
+S +R L L C ++++ +V +L ++ P++ + + L++C+
Sbjct: 477 ASMRIRELNLSNCVRLSDASVMKLSERCPNLNYLS-LRNCE 516
Score = 53.5 bits (127), Expect = 2e-07
Identities = 40/155 (25%), Positives = 73/155 (47%), Gaps = 4/155 (2%)
Query: 123 VGFMGCSVTSKGVIHLTKLRNLSSLDLRHITELDNETVMEIVKRCKNLSSLNLCLNWIIN 182
+ F GC + K ++ RNL L++ +E++ I + C + LNL N I
Sbjct: 226 LNFRGCLLRPKTFRSVSHCRNLQELNVSDCPTFTDESMRHISEGCPGVLCLNLS-NTTIT 284
Query: 183 DRCVEVIAKEGQNLKELYLVSC-KITDYAL--IAIGRYSMTIETVDVGWCKEITDQGATL 239
+R + ++ + NL+ L L C + TD L + +G + +D+ C +I+ QG
Sbjct: 285 NRTMRLLPRHFHNLQNLSLAYCRRFTDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRY 344
Query: 240 IAQSSKSLRYLGLMRCDKVNEVTVEQLVQQYPHIT 274
IA S + +L + + + V+ LV++ IT
Sbjct: 345 IANSCTGIMHLTINDMPTLTDNCVKALVEKCSRIT 379
Score = 48.1 bits (113), Expect = 9e-06
Identities = 25/99 (25%), Positives = 50/99 (50%)
Query: 24 CKQLSDTSIIAVASHCPLLQKVHVGNQDKLTDEGLKQLGSKCRELKDIHFGQCYKISDEG 83
C QLSD I A+A +C L + + K+TD ++ L +KC L + C ++D+
Sbjct: 590 CSQLSDMIIKALAIYCINLTSLSIAGCPKITDSAMEMLSAKCHYLHILDISGCVLLTDQI 649
Query: 84 MIVIAKGCLKLQRIYMQENKLVTDQSVKAFAEHCPELQY 122
+ + GC +L+ + MQ ++ ++ + + + +Y
Sbjct: 650 LEDLQIGCKQLRILKMQYCTNISKKAAQRMSSKVQQQEY 688
Score = 45.1 bits (105), Expect = 8e-05
Identities = 33/133 (24%), Positives = 62/133 (46%), Gaps = 1/133 (0%)
Query: 1 MSDNGVCVLAFKCPGLLRYTAYRCKQLSDTSIIAVASHCPLLQKVHVGNQDKLTDEGLKQ 60
+S+ G+ VL+ + L + C +++D I A +L+ + V +L+D +K
Sbjct: 542 ISNEGLNVLS-RHKKLKELSVSECYRITDDGIQAFCKSSLILEHLDVSYCSQLSDMIIKA 600
Query: 61 LGSKCRELKDIHFGQCYKISDEGMIVIAKGCLKLQRIYMQENKLVTDQSVKAFAEHCPEL 120
L C L + C KI+D M +++ C L + + L+TDQ ++ C +L
Sbjct: 601 LAIYCINLTSLSIAGCPKITDSAMEMLSAKCHYLHILDISGCVLLTDQILEDLQIGCKQL 660
Query: 121 QYVGFMGCSVTSK 133
+ + C+ SK
Sbjct: 661 RILKMQYCTNISK 673
Score = 40.0 bits (92), Expect = 0.003
Identities = 33/188 (17%), Positives = 76/188 (40%), Gaps = 25/188 (13%)
Query: 1 MSDNGVCVLAFKCPGLLRYTAYRCKQLSDTSI-----------------------IAVAS 37
+SD V L+ +CP L + C+ L+ I + V S
Sbjct: 492 LSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNIFSLVSIDLSGTDISNEGLNVLS 551
Query: 38 HCPLLQKVHVGNQDKLTDEGLKQLGSKCRELKDIHFGQCYKISDEGMIVIAKGCLKLQRI 97
L+++ V ++TD+G++ L+ + C ++SD + +A C+ L +
Sbjct: 552 RHKKLKELSVSECYRITDDGIQAFCKSSLILEHLDVSYCSQLSDMIIKALAIYCINLTSL 611
Query: 98 YMQENKLVTDQSVKAFAEHCPELQYVGFMGCSVTSKGVIHLTKL--RNLSSLDLRHITEL 155
+ +TD +++ + C L + GC + + ++ ++ + L L +++ T +
Sbjct: 612 SIAGCPKITDSAMEMLSAKCHYLHILDISGCVLLTDQILEDLQIGCKQLRILKMQYCTNI 671
Query: 156 DNETVMEI 163
+ +
Sbjct: 672 SKKAAQRM 679
>gi|161333854 F-box and leucine-rich repeat protein 13 isoform 2
[Homo sapiens]
Length = 690
Score = 75.9 bits (185), Expect = 4e-14
Identities = 72/281 (25%), Positives = 122/281 (43%), Gaps = 44/281 (15%)
Query: 13 CPGLLRYTAYRCKQLSDTSII-----AVASHCPLLQKVHVGNQDKLTDEGLK--QLGSKC 65
CPG+L C LS+T+I + H LQ + + + TD+GL+ LG+ C
Sbjct: 270 CPGVL------CLNLSNTTITNRTMRLLPRHFHNLQNLSLAYCRRFTDKGLQYLNLGNGC 323
Query: 66 RELKDIHFGQCYKISDEGMIVIAKGCLKLQRIYMQENKLVTDQSVKAFAEHCPELQYVGF 125
+L + C +IS +G IA C + + + + +TD VKA E C + + F
Sbjct: 324 HKLIYLDLSGCTQISVQGFRYIANSCTGIMHLTINDMPTLTDNCVKALVEKCSRITSLVF 383
Query: 126 MGCSVTSKGVIHLTKLRNLSSLDLRHITELDNETVMEIVKRCKNLSSLNLCLNWIINDRC 185
G S R LS+ LR I N+ V D
Sbjct: 384 TGAPHISD-----CTFRALSACKLRKIRFEGNKRV---------------------TDAS 417
Query: 186 VEVIAKEGQNLKELYLVSCK-ITDYALIAIGRYSMTIETVDVGWCKEITDQGAT--LIAQ 242
+ I K NL +Y+ CK ITD +L ++ + +++ C I D G L
Sbjct: 418 FKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQ-LTVLNLANCVRIGDMGLKQFLDGP 476
Query: 243 SSKSLRYLGLMRCDKVNEVTVEQLVQQYPHITFSTVLQDCK 283
+S +R L L C ++++ +V +L ++ P++ + + L++C+
Sbjct: 477 ASMRIRELNLSNCVRLSDASVMKLSERCPNLNYLS-LRNCE 516
Score = 73.6 bits (179), Expect = 2e-13
Identities = 58/256 (22%), Positives = 119/256 (46%), Gaps = 27/256 (10%)
Query: 25 KQLSDTSIIAVASHCPLLQKVHVGNQDKLTDEGLKQLGSKCRELKDIHFGQCYKISDEGM 84
K+++D S + + P L +++ + +TD L+ L S ++L ++ C +I D G+
Sbjct: 411 KRVTDASFKFIDKNYPNLSHIYMADCKGITDSSLRSL-SPLKQLTVLNLANCVRIGDMGL 469
Query: 85 IVIAKG--CLKLQRIYMQENKLVTDQSVKAFAEHCPELQYVGFMGCS-VTSKGVIHLTKL 141
G ++++ + + ++D SV +E CP L Y+ C +T++G+ ++ +
Sbjct: 470 KQFLDGPASMRIRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNI 529
Query: 142 RNLSSLDLRHITELDNETVMEIVKRCKNLSSLNLCLNWIINDRCVEVIAKEGQNLKELYL 201
+L S+DL T++ NE + ++ R K L L++ + I D ++
Sbjct: 530 FSLVSIDLSG-TDISNEG-LNVLSRHKKLKELSVSECYRITDDGIQ-------------- 573
Query: 202 VSCKITDYALIAIGRYSMTIETVDVGWCKEITDQGATLIAQSSKSLRYLGLMRCDKVNEV 261
ITD A+ + + +D+ C +TDQ + K LR L + C +++
Sbjct: 574 ----ITDSAMEMLSAKCHYLHILDISGCVLLTDQILEDLQIGCKQLRILKMQYCTNISKK 629
Query: 262 TVEQL---VQQYPHIT 274
+++ VQQ + T
Sbjct: 630 AAQRMSSKVQQQEYNT 645
Score = 53.5 bits (127), Expect = 2e-07
Identities = 40/155 (25%), Positives = 73/155 (47%), Gaps = 4/155 (2%)
Query: 123 VGFMGCSVTSKGVIHLTKLRNLSSLDLRHITELDNETVMEIVKRCKNLSSLNLCLNWIIN 182
+ F GC + K ++ RNL L++ +E++ I + C + LNL N I
Sbjct: 226 LNFRGCLLRPKTFRSVSHCRNLQELNVSDCPTFTDESMRHISEGCPGVLCLNLS-NTTIT 284
Query: 183 DRCVEVIAKEGQNLKELYLVSC-KITDYAL--IAIGRYSMTIETVDVGWCKEITDQGATL 239
+R + ++ + NL+ L L C + TD L + +G + +D+ C +I+ QG
Sbjct: 285 NRTMRLLPRHFHNLQNLSLAYCRRFTDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRY 344
Query: 240 IAQSSKSLRYLGLMRCDKVNEVTVEQLVQQYPHIT 274
IA S + +L + + + V+ LV++ IT
Sbjct: 345 IANSCTGIMHLTINDMPTLTDNCVKALVEKCSRIT 379
Score = 45.4 bits (106), Expect = 6e-05
Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 32/141 (22%)
Query: 24 CKQLSDTSIIAVASHCPLLQKVHVGNQDKLT------------------------DEGLK 59
C +LSD S++ ++ CP L + + N + LT +EGL
Sbjct: 489 CVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNIFSLVSIDLSGTDISNEGLN 548
Query: 60 QLGSKCRELKDIHFGQCYKISDEG-------MIVIAKGCLKLQRIYMQENKLVTDQSVKA 112
L S+ ++LK++ +CY+I+D+G M +++ C L + + L+TDQ ++
Sbjct: 549 VL-SRHKKLKELSVSECYRITDDGIQITDSAMEMLSAKCHYLHILDISGCVLLTDQILED 607
Query: 113 FAEHCPELQYVGFMGCSVTSK 133
C +L+ + C+ SK
Sbjct: 608 LQIGCKQLRILKMQYCTNISK 628
Score = 33.1 bits (74), Expect = 0.31
Identities = 29/152 (19%), Positives = 62/152 (40%), Gaps = 30/152 (19%)
Query: 1 MSDNGVCVLAFKCPGLLRYTAYRCKQLSDTSI-----------------------IAVAS 37
+SD V L+ +CP L + C+ L+ I + V S
Sbjct: 492 LSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNIFSLVSIDLSGTDISNEGLNVLS 551
Query: 38 HCPLLQKVHVGNQDKLTDEGLK-------QLGSKCRELKDIHFGQCYKISDEGMIVIAKG 90
L+++ V ++TD+G++ L +KC L + C ++D+ + + G
Sbjct: 552 RHKKLKELSVSECYRITDDGIQITDSAMEMLSAKCHYLHILDISGCVLLTDQILEDLQIG 611
Query: 91 CLKLQRIYMQENKLVTDQSVKAFAEHCPELQY 122
C +L+ + MQ ++ ++ + + + +Y
Sbjct: 612 CKQLRILKMQYCTNISKKAAQRMSSKVQQQEY 643
>gi|164663798 antagonist of mitotic exit network 1 homolog [Homo
sapiens]
Length = 258
Score = 73.6 bits (179), Expect = 2e-13
Identities = 49/174 (28%), Positives = 86/174 (49%), Gaps = 8/174 (4%)
Query: 23 RCKQLSDTSIIAVASHCPLLQKVHV----GNQDKLTDEGLKQLGSKCRELKDIHFGQCYK 78
R +SD +++ + S+C L+K+++ GN+ +T EG+K + S C L + +C
Sbjct: 69 RSCDISDAALLHL-SNCRKLKKLNLNASKGNRVSVTSEGIKAVASSCSYLHEASLKRCCN 127
Query: 79 ISDEGMIVIAKGCLKLQRIYMQENKLVTDQSVKAFAEHCPELQYVGFMGCSVTSKGVIHL 138
++DEG++ +A C L+ I + +TD S+ A ++CP LQ V F V+ GVI L
Sbjct: 128 LTDEGVVALALNCQLLKIIDLGGCLSITDVSLHALGKNCPFLQCVDFSATQVSDSGVIAL 187
Query: 139 TK---LRNLSSLDLRHITELDNETVMEIVKRCKNLSSLNLCLNWIINDRCVEVI 189
+ L + + H L + V ++ C + L +I D EV+
Sbjct: 188 VSGPCAKKLEEIHMGHCVNLTDGAVEAVLTYCPQIRILLFHGCPLITDHSREVL 241
Score = 70.9 bits (172), Expect = 1e-12
Identities = 40/130 (30%), Positives = 70/130 (53%), Gaps = 3/130 (2%)
Query: 1 MSDNGVCVLAFKCPGLLRYTAYRCKQLSDTSIIAVASHCPLLQKVHVGNQDKLTDEGLKQ 60
++ G+ +A C L + RC L+D ++A+A +C LL+ + +G +TD L
Sbjct: 102 VTSEGIKAVASSCSYLHEASLKRCCNLTDEGVVALALNCQLLKIIDLGGCLSITDVSLHA 161
Query: 61 LGSKCRELKDIHFGQCYKISDEGMIVIAKG--CLKLQRIYMQENKLVTDQSVKAFAEHCP 118
LG C L+ + F ++SD G+I + G KL+ I+M +TD +V+A +CP
Sbjct: 162 LGKNCPFLQCVDF-SATQVSDSGVIALVSGPCAKKLEEIHMGHCVNLTDGAVEAVLTYCP 220
Query: 119 ELQYVGFMGC 128
+++ + F GC
Sbjct: 221 QIRILLFHGC 230
Score = 46.2 bits (108), Expect = 4e-05
Identities = 46/198 (23%), Positives = 79/198 (39%), Gaps = 38/198 (19%)
Query: 105 VTDQSVKAFAEHCPELQYVGFMGCSVTSKGVIHLTKLRNLSSLDLR----HITELDNETV 160
+TD ++ PE+Q + C ++ ++HL+ R L L+L + + +E +
Sbjct: 50 ITDSNISEILH--PEVQTLDLRSCDISDAALLHLSNCRKLKKLNLNASKGNRVSVTSEGI 107
Query: 161 MEIVKRCKNL--SSLNLCLNWIINDRCVEVIAKEGQNLKELYLVSC-KITDYALIAIGR- 216
+ C L +SL C N + D V +A Q LK + L C ITD +L A+G+
Sbjct: 108 KAVASSCSYLHEASLKRCCN--LTDEGVVALALNCQLLKIIDLGGCLSITDVSLHALGKN 165
Query: 217 --------YSMT------------------IETVDVGWCKEITDQGATLIAQSSKSLRYL 250
+S T +E + +G C +TD + +R L
Sbjct: 166 CPFLQCVDFSATQVSDSGVIALVSGPCAKKLEEIHMGHCVNLTDGAVEAVLTYCPQIRIL 225
Query: 251 GLMRCDKVNEVTVEQLVQ 268
C + + + E L Q
Sbjct: 226 LFHGCPLITDHSREVLEQ 243
>gi|190194416 F-box and leucine-rich repeat protein 15 [Homo
sapiens]
Length = 300
Score = 66.2 bits (160), Expect = 3e-11
Identities = 47/169 (27%), Positives = 84/169 (49%), Gaps = 3/169 (1%)
Query: 1 MSDNGVCVLAFKCPGLLRYTAYRCKQLSDTSIIAVASHCPLLQKVHVGNQDKLTDEGLKQ 60
+SD + + + P L C QLS ++ A+A CP LQ++ + + D + L+
Sbjct: 101 LSDEDLVPVLARNPQLRSVALGGCGQLSRRALGALAEGCPRLQRLSLAHCDWVDGLALRG 160
Query: 61 LGSKCRELKDIHFGQCYKISDEGMIVIA-KGCLKLQRIYMQENKLVTDQSVKAFAEHCPE 119
L +C L+++ C ++ DE ++ +A + L+ + + N V D +V+ A +CPE
Sbjct: 161 LADRCPALEELDLTACRQLKDEAIVYLAQRRGAGLRSLSLAVNANVGDAAVQELARNCPE 220
Query: 120 LQYVGFMGC-SVTSKGVIHLTK-LRNLSSLDLRHITELDNETVMEIVKR 166
L ++ GC V S GV L + L SL +RH + ++ + KR
Sbjct: 221 LHHLDLTGCLRVGSDGVRTLAEYCPVLRSLRVRHCHHVAESSLSRLRKR 269
Score = 46.6 bits (109), Expect = 3e-05
Identities = 43/202 (21%), Positives = 84/202 (41%), Gaps = 27/202 (13%)
Query: 68 LKDIHFGQCYK-ISDEGMIVIAKGCLKLQRIYMQENKLVTDQSVKAFAEHCPELQYVGFM 126
L+++ C++ +SDE ++ + +L+ + + ++ +++ A AE CP LQ
Sbjct: 89 LQELALAPCHEWLSDEDLVPVLARNPQLRSVALGGCGQLSRRALGALAEGCPRLQ----- 143
Query: 127 GCSVTSKGVIHLTKLRNLSSLDLRHITELDNETVMEIVKRCKNLSSLNLCLNWIINDRCV 186
L L H +D + + RC L L+L + D +
Sbjct: 144 -------------------RLSLAHCDWVDGLALRGLADRCPALEELDLTACRQLKDEAI 184
Query: 187 EVIA-KEGQNLKELYL-VSCKITDYALIAIGRYSMTIETVDVGWCKEITDQGATLIAQSS 244
+A + G L+ L L V+ + D A+ + R + +D+ C + G +A+
Sbjct: 185 VYLAQRRGAGLRSLSLAVNANVGDAAVQELARNCPELHHLDLTGCLRVGSDGVRTLAEYC 244
Query: 245 KSLRYLGLMRCDKVNEVTVEQL 266
LR L + C V E ++ +L
Sbjct: 245 PVLRSLRVRHCHHVAESSLSRL 266
Score = 35.0 bits (79), Expect = 0.082
Identities = 19/85 (22%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 189 IAKEGQNLKELYLVSCK--ITDYALIAIGRYSMTIETVDVGWCKEITDQGATLIAQSSKS 246
+ ++ + L+EL L C ++D L+ + + + +V +G C +++ + +A+
Sbjct: 82 LLRDAEGLQELALAPCHEWLSDEDLVPVLARNPQLRSVALGGCGQLSRRALGALAEGCPR 141
Query: 247 LRYLGLMRCDKVNEVTVEQLVQQYP 271
L+ L L CD V+ + + L + P
Sbjct: 142 LQRLSLAHCDWVDGLALRGLADRCP 166
>gi|16306588 F-box and leucine-rich repeat protein 4 [Homo sapiens]
Length = 621
Score = 63.2 bits (152), Expect = 3e-10
Identities = 42/184 (22%), Positives = 84/184 (45%), Gaps = 33/184 (17%)
Query: 12 KCPGLLRYTAYRCKQLSDTSIIAVASHCPLLQKVHVGNQDKLTDEGL--KQLGSKCRELK 69
K L R YR K + T+++++ + C LQ + +G+ + D + +G+KC++L+
Sbjct: 424 KLCSLKRLVLYRTK-VEQTALLSILNFCSELQHLSLGSCVMIEDYDVIASMIGAKCKKLR 482
Query: 70 DIHFGQCYKISDEGMIVIAKGCL----------------------------KLQRIYMQE 101
+ +C I++ G+ +A GC LQ++++
Sbjct: 483 TLDLWRCKNITENGIAELASGCPLLEELDLGWCPTLQSSTGCFTRLAHQLPNLQKLFLTA 542
Query: 102 NKLVTDQSVKAFAEHCPELQYVGFMGCSVTSKGVIH--LTKLRNLSSLDLRHITELDNET 159
N+ V D + A +C LQ + +G + S + L ++LS LD+ +++DN
Sbjct: 543 NRSVCDTDIDELACNCTRLQQLDILGTRMVSPASLRKLLESCKDLSLLDVSFCSQIDNRA 602
Query: 160 VMEI 163
V+E+
Sbjct: 603 VLEL 606
Score = 60.8 bits (146), Expect = 1e-09
Identities = 68/266 (25%), Positives = 117/266 (43%), Gaps = 22/266 (8%)
Query: 14 PGLLRYTAYRCKQLSDTSIIAVASHCPLLQKVHVGNQD---KLTDEGLKQLGSKCRELKD 70
P L R A CK LS C LQ +H+ Q KL D L+ L S+C ++
Sbjct: 298 PDLCRL-AQTCKLLSQHC-------CDPLQYIHLNLQPYWAKLDDTSLEFLQSRCTLVQW 349
Query: 71 IHF---GQCYKISDEGMIVIAKGC-LKLQRIYMQENKLVTDQSVKAFAEHCPELQYVGFM 126
++ G IS G K C +L R+ + + + + ++ +E CP LQ +
Sbjct: 350 LNLSWTGNRGFISVAGFSRFLKVCGSELVRLELSCSHFLNETCLEVISEMCPNLQALNLS 409
Query: 127 GC-SVTSKGVIHLTKLRNLSSLDLRHITELDNETVMEIVKRCKNLSSLNL--CLNWIIND 183
C + + H+ KL +L L L + T+++ ++ I+ C L L+L C+ D
Sbjct: 410 SCDKLPPQAFNHIAKLCSLKRLVL-YRTKVEQTALLSILNFCSELQHLSLGSCVMIEDYD 468
Query: 184 RCVEVIAKEGQNLKELYLVSCK-ITDYALIAIGRYSMTIETVDVGWCKEITDQGA--TLI 240
+I + + L+ L L CK IT+ + + +E +D+GWC + T +
Sbjct: 469 VIASMIGAKCKKLRTLDLWRCKNITENGIAELASGCPLLEELDLGWCPTLQSSTGCFTRL 528
Query: 241 AQSSKSLRYLGLMRCDKVNEVTVEQL 266
A +L+ L L V + +++L
Sbjct: 529 AHQLPNLQKLFLTANRSVCDTDIDEL 554
Score = 50.4 bits (119), Expect = 2e-06
Identities = 46/250 (18%), Positives = 102/250 (40%), Gaps = 27/250 (10%)
Query: 27 LSDTSIIAVASHCPLLQKVHVGNQDKLTDEGLKQLGSKCRELKDIHFGQCYKISDEGMIV 86
L++T + ++ CP LQ +++ + DKL + + C + + + K+ ++
Sbjct: 388 LNETCLEVISEMCPNLQALNLSSCDKLPPQAFNHIAKLCSLKRLVLYRT--KVEQTALLS 445
Query: 87 IAKGCLKLQRIYMQENKLVTDQSVKAFAEHCPELQYVGFMGCSVTSKGVIHLTKLRNLSS 146
I C +LQ + + ++ D V A +G K + L +
Sbjct: 446 ILNFCSELQHLSLGSCVMIEDYDVIA--------SMIG--------------AKCKKLRT 483
Query: 147 LDLRHITELDNETVMEIVKRCKNLSSLNL--CLNWIINDRCVEVIAKEGQNLKELYLVSC 204
LDL + + E+ C L L+L C + C +A + NL++L+L +
Sbjct: 484 LDLWRCKNITENGIAELASGCPLLEELDLGWCPTLQSSTGCFTRLAHQLPNLQKLFLTAN 543
Query: 205 K-ITDYALIAIGRYSMTIETVDVGWCKEITDQGATLIAQSSKSLRYLGLMRCDKVNEVTV 263
+ + D + + ++ +D+ + ++ + +S K L L + C +++ V
Sbjct: 544 RSVCDTDIDELACNCTRLQQLDILGTRMVSPASLRKLLESCKDLSLLDVSFCSQIDNRAV 603
Query: 264 EQLVQQYPHI 273
+L +P +
Sbjct: 604 LELNASFPKV 613
Score = 45.1 bits (105), Expect = 8e-05
Identities = 38/160 (23%), Positives = 63/160 (39%), Gaps = 41/160 (25%)
Query: 170 LSSLNLCLNWIINDRCVEVIAKEGQNLKELYLVSC------------------------- 204
L L L + +N+ C+EVI++ NL+ L L SC
Sbjct: 377 LVRLELSCSHFLNETCLEVISEMCPNLQALNLSSCDKLPPQAFNHIAKLCSLKRLVLYRT 436
Query: 205 KITDYALIAIGRYSMTIETVDVGWCKEITDQG--ATLIAQSSKSLRYLGLMRCDKVNEVT 262
K+ AL++I + ++ + +G C I D A++I K LR L L RC + E
Sbjct: 437 KVEQTALLSILNFCSELQHLSLGSCVMIEDYDVIASMIGAKCKKLRTLDLWRCKNITENG 496
Query: 263 VEQLVQQYPHITFSTVLQDCKRTLERAYQMGWTPNMSAAS 302
+ +L P L +GW P + +++
Sbjct: 497 IAELASGCP--------------LLEELDLGWCPTLQSST 522
>gi|24025682 F-box and leucine-rich repeat protein 16 [Homo sapiens]
Length = 479
Score = 59.3 bits (142), Expect = 4e-09
Identities = 53/218 (24%), Positives = 104/218 (47%), Gaps = 6/218 (2%)
Query: 53 LTDEGLKQLGSKCRELKDIHFGQCYKISDEGMIVIAKGCLKLQRIYMQENKLVTDQSVKA 112
+TD GL+ + + + + + C ++ G+ ++ + + + V D ++ A
Sbjct: 205 ITDAGLEVMLEQMQGVVRLELSGCNDFTEAGLWSSLSA--RITSLSVSDCINVADDAIAA 262
Query: 113 FAEHCPELQYVGFMGCSVTSKGVIHLTKLRNLSSLDLRHIT--ELDNETVMEIVKRCKNL 170
++ P L + VT + + T + S+ LR ++ E+ N V+ +V NL
Sbjct: 263 ISQLLPNLAELSLQAYHVTDTALAYFTARQGHSTHTLRLLSCWEITNHGVVNVVHSLPNL 322
Query: 171 SSLNLCLNWIINDRCVEVIAKEGQNLKELYLVSC-KITDYALIAIGRYSMTIETVDVGWC 229
++L+L + D VE++A+ + L+ L L C +ITD AL + +E + + C
Sbjct: 323 TALSLSGCSKVTDDGVELVAENLRKLRSLDLSWCPRITDMALEYVACDLHRLEELVLDRC 382
Query: 230 KEITDQGATLIAQSSKSLRYLGLMRCDKVNEVTVEQLV 267
ITD G + ++ S SLR L L C +V + ++ L+
Sbjct: 383 VRITDTGLSYLSTMS-SLRSLYLRWCCQVQDFGLKHLL 419
Score = 58.2 bits (139), Expect = 9e-09
Identities = 37/181 (20%), Positives = 84/181 (46%), Gaps = 2/181 (1%)
Query: 105 VTDQSVKAFAEHCPELQYVGFMGCSVTSKGVIHLTKLRNLSSLDLRHITELDNETVMEIV 164
+TD ++ E + + GC+ ++ + + ++SL + + ++ + I
Sbjct: 205 ITDAGLEVMLEQMQGVVRLELSGCNDFTEAGLWSSLSARITSLSVSDCINVADDAIAAIS 264
Query: 165 KRCKNLSSLNLCLNWIINDRCVEVIAKEGQNLKELYLVSC-KITDYALIAIGRYSMTIET 223
+ NL+ L+L + + A++G + L L+SC +IT++ ++ + +
Sbjct: 265 QLLPNLAELSLQAYHVTDTALAYFTARQGHSTHTLRLLSCWEITNHGVVNVVHSLPNLTA 324
Query: 224 VDVGWCKEITDQGATLIAQSSKSLRYLGLMRCDKVNEVTVEQLVQQYPHITFSTVLQDCK 283
+ + C ++TD G L+A++ + LR L L C ++ ++ +E + H VL C
Sbjct: 325 LSLSGCSKVTDDGVELVAENLRKLRSLDLSWCPRITDMALEYVACDL-HRLEELVLDRCV 383
Query: 284 R 284
R
Sbjct: 384 R 384
Score = 42.0 bits (97), Expect = 7e-04
Identities = 32/150 (21%), Positives = 72/150 (48%), Gaps = 3/150 (2%)
Query: 1 MSDNGVCVLAFKCPGLLRYTAYRCKQLSDTSIIAVASHCPLLQKVHVGNQDKLTDEGLKQ 60
++++GV + P L + C +++D + VA + L+ + + ++TD L+
Sbjct: 307 ITNHGVVNVVHSLPNLTALSLSGCSKVTDDGVELVAENLRKLRSLDLSWCPRITDMALEY 366
Query: 61 LGSKCRELKDIHFGQCYKISDEGMIVIAKGCLKLQRIYMQENKLVTDQSVKAFAEHCPEL 120
+ L+++ +C +I+D G+ ++ L+ +Y++ V D +K L
Sbjct: 367 VACDLHRLEELVLDRCVRITDTGLSYLST-MSSLRSLYLRWCCQVQDFGLKHLLA-LGSL 424
Query: 121 QYVGFMGCS-VTSKGVIHLTKLRNLSSLDL 149
+ + GC +T+ G+ L +L+ L L+L
Sbjct: 425 RLLSPAGCPLLTTTGLSGLVQLQELEELEL 454
Score = 40.8 bits (94), Expect = 0.001
Identities = 25/124 (20%), Positives = 54/124 (43%)
Query: 24 CKQLSDTSIIAVASHCPLLQKVHVGNQDKLTDEGLKQLGSKCRELKDIHFGQCYKISDEG 83
C ++++ ++ V P L + + K+TD+G++ + R+L+ + C +I+D
Sbjct: 304 CWEITNHGVVNVVHSLPNLTALSLSGCSKVTDDGVELVAENLRKLRSLDLSWCPRITDMA 363
Query: 84 MIVIAKGCLKLQRIYMQENKLVTDQSVKAFAEHCPELQYVGFMGCSVTSKGVIHLTKLRN 143
+ +A +L+ + + +TD + + C V G+ HL L +
Sbjct: 364 LEYVACDLHRLEELVLDRCVRITDTGLSYLSTMSSLRSLYLRWCCQVQDFGLKHLLALGS 423
Query: 144 LSSL 147
L L
Sbjct: 424 LRLL 427
>gi|51873034 F-box and leucine-rich repeat protein 9 [Homo sapiens]
Length = 223
Score = 48.1 bits (113), Expect = 9e-06
Identities = 23/76 (30%), Positives = 39/76 (51%)
Query: 1 MSDNGVCVLAFKCPGLLRYTAYRCKQLSDTSIIAVASHCPLLQKVHVGNQDKLTDEGLKQ 60
++DNG+ +A CP L C +LSD AS P LQ +++ + +L ++ L
Sbjct: 113 LTDNGLVAVARGCPSLEHLALSHCSRLSDKGWAQAASSWPRLQHLNLSSCSQLIEQTLDA 172
Query: 61 LGSKCRELKDIHFGQC 76
+G CR+L+ + C
Sbjct: 173 IGQACRQLRVLDVATC 188
Score = 45.8 bits (107), Expect = 5e-05
Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Query: 24 CKQLSDTSIIAVASHCPLLQKVHVGNQDKLTDEGLKQLGSKCRELKDIHFGQCYKISDEG 83
C +L+D S+ V L Q + + +LTD GL + C L+ + C ++SD+G
Sbjct: 85 CSKLTDASLAKVLQFLQLRQ-LSLSLLPELTDNGLVAVARGCPSLEHLALSHCSRLSDKG 143
Query: 84 MIVIAKGCLKLQRIYMQENKLVTDQSVKAFAEHCPELQYVGFMGC 128
A +LQ + + + +Q++ A + C +L+ + C
Sbjct: 144 WAQAASSWPRLQHLNLSSCSQLIEQTLDAIGQACRQLRVLDVATC 188
Score = 45.4 bits (106), Expect = 6e-05
Identities = 22/98 (22%), Positives = 51/98 (52%)
Query: 26 QLSDTSIIAVASHCPLLQKVHVGNQDKLTDEGLKQLGSKCRELKDIHFGQCYKISDEGMI 85
+L+D ++AVA CP L+ + + + +L+D+G Q S L+ ++ C ++ ++ +
Sbjct: 112 ELTDNGLVAVARGCPSLEHLALSHCSRLSDKGWAQAASSWPRLQHLNLSSCSQLIEQTLD 171
Query: 86 VIAKGCLKLQRIYMQENKLVTDQSVKAFAEHCPELQYV 123
I + C +L+ + + + +V+ F P++ V
Sbjct: 172 AIGQACRQLRVLDVATCPGINMAAVRRFQAQLPQVSCV 209
Score = 42.7 bits (99), Expect = 4e-04
Identities = 26/96 (27%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 196 LKELYLVSC-KITDYALIAIGRYSMTIETVDVGWCKEITDQGATLIAQSSKSLRYLGLMR 254
L+EL L +C K+TD +L + ++ + + + + E+TD G +A+ SL +L L
Sbjct: 77 LQELDLTACSKLTDASLAKVLQF-LQLRQLSLSLLPELTDNGLVAVARGCPSLEHLALSH 135
Query: 255 CDKVNEVTVEQLVQQYP---HITFSTVLQDCKRTLE 287
C ++++ Q +P H+ S+ Q ++TL+
Sbjct: 136 CSRLSDKGWAQAASSWPRLQHLNLSSCSQLIEQTLD 171
Score = 40.4 bits (93), Expect = 0.002
Identities = 21/88 (23%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 42 LQKVHVGNQDKLTDEGLKQLGSKCRELKDIHFGQCYKISDEGMIVIAKGCLKLQRIYMQE 101
LQ++ + KLTD L ++ + +L+ + +++D G++ +A+GC L+ + +
Sbjct: 77 LQELDLTACSKLTDASLAKV-LQFLQLRQLSLSLLPELTDNGLVAVARGCPSLEHLALSH 135
Query: 102 NKLVTDQSVKAFAEHCPELQYVGFMGCS 129
++D+ A P LQ++ CS
Sbjct: 136 CSRLSDKGWAQAASSWPRLQHLNLSSCS 163
Score = 37.7 bits (86), Expect = 0.013
Identities = 18/64 (28%), Positives = 36/64 (56%)
Query: 205 KITDYALIAIGRYSMTIETVDVGWCKEITDQGATLIAQSSKSLRYLGLMRCDKVNEVTVE 264
++TD L+A+ R ++E + + C ++D+G A S L++L L C ++ E T++
Sbjct: 112 ELTDNGLVAVARGCPSLEHLALSHCSRLSDKGWAQAASSWPRLQHLNLSSCSQLIEQTLD 171
Query: 265 QLVQ 268
+ Q
Sbjct: 172 AIGQ 175
>gi|16306591 F-box and leucine-rich repeat protein 9 [Homo sapiens]
Length = 223
Score = 48.1 bits (113), Expect = 9e-06
Identities = 23/76 (30%), Positives = 39/76 (51%)
Query: 1 MSDNGVCVLAFKCPGLLRYTAYRCKQLSDTSIIAVASHCPLLQKVHVGNQDKLTDEGLKQ 60
++DNG+ +A CP L C +LSD AS P LQ +++ + +L ++ L
Sbjct: 113 LTDNGLVAVARGCPSLEHLALSHCSRLSDKGWAQAASSWPRLQHLNLSSCSQLIEQTLDA 172
Query: 61 LGSKCRELKDIHFGQC 76
+G CR+L+ + C
Sbjct: 173 IGQACRQLRVLDVATC 188
Score = 45.8 bits (107), Expect = 5e-05
Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Query: 24 CKQLSDTSIIAVASHCPLLQKVHVGNQDKLTDEGLKQLGSKCRELKDIHFGQCYKISDEG 83
C +L+D S+ V L Q + + +LTD GL + C L+ + C ++SD+G
Sbjct: 85 CSKLTDASLAKVLQFLQLRQ-LSLSLLPELTDNGLVAVARGCPSLEHLALSHCSRLSDKG 143
Query: 84 MIVIAKGCLKLQRIYMQENKLVTDQSVKAFAEHCPELQYVGFMGC 128
A +LQ + + + +Q++ A + C +L+ + C
Sbjct: 144 WAQAASSWPRLQHLNLSSCSQLIEQTLDAIGQACRQLRVLDVATC 188
Score = 45.4 bits (106), Expect = 6e-05
Identities = 22/98 (22%), Positives = 51/98 (52%)
Query: 26 QLSDTSIIAVASHCPLLQKVHVGNQDKLTDEGLKQLGSKCRELKDIHFGQCYKISDEGMI 85
+L+D ++AVA CP L+ + + + +L+D+G Q S L+ ++ C ++ ++ +
Sbjct: 112 ELTDNGLVAVARGCPSLEHLALSHCSRLSDKGWAQAASSWPRLQHLNLSSCSQLIEQTLD 171
Query: 86 VIAKGCLKLQRIYMQENKLVTDQSVKAFAEHCPELQYV 123
I + C +L+ + + + +V+ F P++ V
Sbjct: 172 AIGQACRQLRVLDVATCPGINMAAVRRFQAQLPQVSCV 209
Score = 42.7 bits (99), Expect = 4e-04
Identities = 26/96 (27%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 196 LKELYLVSC-KITDYALIAIGRYSMTIETVDVGWCKEITDQGATLIAQSSKSLRYLGLMR 254
L+EL L +C K+TD +L + ++ + + + + E+TD G +A+ SL +L L
Sbjct: 77 LQELDLTACSKLTDASLAKVLQF-LQLRQLSLSLLPELTDNGLVAVARGCPSLEHLALSH 135
Query: 255 CDKVNEVTVEQLVQQYP---HITFSTVLQDCKRTLE 287
C ++++ Q +P H+ S+ Q ++TL+
Sbjct: 136 CSRLSDKGWAQAASSWPRLQHLNLSSCSQLIEQTLD 171
Score = 40.4 bits (93), Expect = 0.002
Identities = 21/88 (23%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 42 LQKVHVGNQDKLTDEGLKQLGSKCRELKDIHFGQCYKISDEGMIVIAKGCLKLQRIYMQE 101
LQ++ + KLTD L ++ + +L+ + +++D G++ +A+GC L+ + +
Sbjct: 77 LQELDLTACSKLTDASLAKV-LQFLQLRQLSLSLLPELTDNGLVAVARGCPSLEHLALSH 135
Query: 102 NKLVTDQSVKAFAEHCPELQYVGFMGCS 129
++D+ A P LQ++ CS
Sbjct: 136 CSRLSDKGWAQAASSWPRLQHLNLSSCS 163
Score = 37.7 bits (86), Expect = 0.013
Identities = 18/64 (28%), Positives = 36/64 (56%)
Query: 205 KITDYALIAIGRYSMTIETVDVGWCKEITDQGATLIAQSSKSLRYLGLMRCDKVNEVTVE 264
++TD L+A+ R ++E + + C ++D+G A S L++L L C ++ E T++
Sbjct: 112 ELTDNGLVAVARGCPSLEHLALSHCSRLSDKGWAQAASSWPRLQHLNLSSCSQLIEQTLD 171
Query: 265 QLVQ 268
+ Q
Sbjct: 172 AIGQ 175
>gi|16306580 F-box and leucine-rich repeat protein 11 [Homo sapiens]
Length = 1162
Score = 41.2 bits (95), Expect = 0.001
Identities = 38/176 (21%), Positives = 76/176 (43%), Gaps = 20/176 (11%)
Query: 118 PELQYVGFMGCSVTSKGVIHLTKLRNLSSLDLRHITELDNETVMEIVKRCKNLSSLNLCL 177
P L+ + GCS ++ + + L +LDLR + + + +++
Sbjct: 977 PGLKDLLLAGCSWSAVSALSTSSCPLLRTLDLRWAVGIKDPQIRDLLTPPA--------- 1027
Query: 178 NWIINDRCVEVIAKEGQNLKELYLVSCKITDYALIAIGRYSMTIETVDVGWCKEITDQGA 237
D+ + + +N+ + L ITD L I R+ + +D+ C +TDQ +
Sbjct: 1028 -----DKPGQDNRSKLRNMTDFRLAGLDITDATLRLIIRHMPLLSRLDLSHCSHLTDQSS 1082
Query: 238 TLIAQSSKSLRY----LGLMRCDKVNEVTVEQLVQQYPHITFSTVLQDCKRTLERA 289
L+ S RY L + C+K+ + T+ L ++ ++T L+ CK+ +A
Sbjct: 1083 NLLTAVGSSTRYSLTELNMAGCNKLTDQTLIYL-RRIANVTLID-LRGCKQITRKA 1136
Score = 33.1 bits (74), Expect = 0.31
Identities = 17/67 (25%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 27 LSDTSIIAVASHCPLLQKVHVGNQDKLTDEG---LKQLGSKCR-ELKDIHFGQCYKISDE 82
++D ++ + H PLL ++ + + LTD+ L +GS R L +++ C K++D+
Sbjct: 1051 ITDATLRLIIRHMPLLSRLDLSHCSHLTDQSSNLLTAVGSSTRYSLTELNMAGCNKLTDQ 1110
Query: 83 GMIVIAK 89
+I + +
Sbjct: 1111 TLIYLRR 1117
>gi|54112380 F-box and leucine-rich repeat protein 10 isoform b [Homo
sapiens]
Length = 1265
Score = 41.2 bits (95), Expect = 0.001
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 8/112 (7%)
Query: 27 LSDTSIIAVASHCPLLQKVHVGNQDKLTDEGLKQL---GSKCRE-LKDIHFGQCYKISDE 82
++D S+ + H PLL K+H+ + +TD+ + L G+ R+ L +I+ C K++D+
Sbjct: 1156 ITDASLRLIIRHMPLLSKLHLSYCNHVTDQSINLLTAVGTTTRDSLTEINLSDCNKVTDQ 1215
Query: 83 GMIVIAKGCLKLQRIYMQENKLVTDQSVKAFAEHCPELQYVGFMGCSVTSKG 134
+ K C + I ++ K VT + + F Q CS T G
Sbjct: 1216 -CLSFFKRCGNICHIDLRYCKQVTKEGCEQFIAEMSSFQ---GRSCSTTRLG 1263
Score = 36.2 bits (82), Expect = 0.037
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 194 QNLKELYLVSCKITDYALIAIGRYSMTIETVDVGWCKEITDQGATLI----AQSSKSLRY 249
+N+ EL L ITD +L I R+ + + + +C +TDQ L+ + SL
Sbjct: 1144 RNIVELRLAGLDITDASLRLIIRHMPLLSKLHLSYCNHVTDQSINLLTAVGTTTRDSLTE 1203
Query: 250 LGLMRCDKVNE 260
+ L C+KV +
Sbjct: 1204 INLSDCNKVTD 1214
>gi|5453880 acidic (leucine-rich) nuclear phosphoprotein 32 family,
member A [Homo sapiens]
Length = 249
Score = 40.0 bits (92), Expect = 0.003
Identities = 30/111 (27%), Positives = 57/111 (51%), Gaps = 11/111 (9%)
Query: 101 ENKLVTDQSVKAFAEHCPELQYVGFMGCSVTSKGVIHLTKLRNLSSLDLRHITELDNET- 159
+N + ++ + EL+++ + +TS + +L KL L L+L DN
Sbjct: 25 DNSRSNEGKLEGLTDEFEELEFLSTINVGLTS--IANLPKLNKLKKLELS-----DNRVS 77
Query: 160 --VMEIVKRCKNLSSLNLCLNWIINDRCVEVIAKEGQNLKELYLVSCKITD 208
+ + ++C NL+ LNL N I + +E + K+ +NLK L L +C++T+
Sbjct: 78 GGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPL-KKLENLKSLDLFNCEVTN 127
>gi|54112382 F-box and leucine-rich repeat protein 10 isoform a [Homo
sapiens]
Length = 1336
Score = 40.0 bits (92), Expect = 0.003
Identities = 28/101 (27%), Positives = 53/101 (52%), Gaps = 6/101 (5%)
Query: 27 LSDTSIIAVASHCPLLQKVHVGNQDKLTDEGLKQL---GSKCRE-LKDIHFGQCYKISDE 82
++D S+ + H PLL K+H+ + +TD+ + L G+ R+ L +I+ C K++D+
Sbjct: 1225 ITDASLRLIIRHMPLLSKLHLSYCNHVTDQSINLLTAVGTTTRDSLTEINLSDCNKVTDQ 1284
Query: 83 GMIVIAKGCLKLQRIYMQENKLVTDQSVKAF-AEHCPELQY 122
+ K C + I ++ K VT + + F AE +Q+
Sbjct: 1285 -CLSFFKRCGNICHIDLRYCKQVTKEGCEQFIAEMSVSVQF 1324
Score = 36.2 bits (82), Expect = 0.037
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 194 QNLKELYLVSCKITDYALIAIGRYSMTIETVDVGWCKEITDQGATLI----AQSSKSLRY 249
+N+ EL L ITD +L I R+ + + + +C +TDQ L+ + SL
Sbjct: 1213 RNIVELRLAGLDITDASLRLIIRHMPLLSKLHLSYCNHVTDQSINLLTAVGTTTRDSLTE 1272
Query: 250 LGLMRCDKVNE 260
+ L C+KV +
Sbjct: 1273 INLSDCNKVTD 1283
>gi|13569879 acidic (leucine-rich) nuclear phosphoprotein 32 family,
member E isoform 1 [Homo sapiens]
Length = 268
Score = 37.0 bits (84), Expect = 0.022
Identities = 24/87 (27%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 93 KLQRIYMQENKLVTDQSVKAFAEHCPELQYVGFMGCSVTSKGVIH-LTKLRNLSSLDLRH 151
KL+++ + +N + ++ AE CP L Y+ G + + L L+NL SLDL +
Sbjct: 65 KLRKLELSDN--IISGGLEVLAEKCPNLTYLNLSGNKIKDLSTVEALQNLKNLKSLDLFN 122
Query: 152 --ITELDN--ETVMEIVKRCKNLSSLN 174
IT L++ E++ E++++ L +
Sbjct: 123 CEITNLEDYRESIFELLQQITYLDGFD 149
Score = 35.0 bits (79), Expect = 0.082
Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 13/112 (11%)
Query: 101 ENKLVTDQSVKAFAEHCPELQYVGFMGCSVTSKGVIHLTKLRNLSSLDLRHITELDNETV 160
+N L + ++ + EL+++ S + L+ L L SL+ EL + +
Sbjct: 25 DNCLCVNGEIEGLNDTFKELEFL--------SMANVELSSLARLPSLNKLRKLELSDNII 76
Query: 161 ---MEIV-KRCKNLSSLNLCLNWIINDRCVEVIAKEGQNLKELYLVSCKITD 208
+E++ ++C NL+ LNL N I + VE + + +NLK L L +C+IT+
Sbjct: 77 SGGLEVLAEKCPNLTYLNLSGNKIKDLSTVEAL-QNLKNLKSLDLFNCEITN 127
>gi|210147571 acidic (leucine-rich) nuclear phosphoprotein 32
family, member E isoform 3 [Homo sapiens]
Length = 220
Score = 37.0 bits (84), Expect = 0.022
Identities = 24/87 (27%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 93 KLQRIYMQENKLVTDQSVKAFAEHCPELQYVGFMGCSVTSKGVIH-LTKLRNLSSLDLRH 151
KL+++ + +N + ++ AE CP L Y+ G + + L L+NL SLDL +
Sbjct: 17 KLRKLELSDN--IISGGLEVLAEKCPNLTYLNLSGNKIKDLSTVEALQNLKNLKSLDLFN 74
Query: 152 --ITELDN--ETVMEIVKRCKNLSSLN 174
IT L++ E++ E++++ L +
Sbjct: 75 CEITNLEDYRESIFELLQQITYLDGFD 101
Score = 34.3 bits (77), Expect = 0.14
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 136 IHLTKLRNLSSLDLRHITELDNETV---MEIV-KRCKNLSSLNLCLNWIINDRCVEVIAK 191
+ L+ L L SL+ EL + + +E++ ++C NL+ LNL N I + VE + +
Sbjct: 4 VELSSLARLPSLNKLRKLELSDNIISGGLEVLAEKCPNLTYLNLSGNKIKDLSTVEAL-Q 62
Query: 192 EGQNLKELYLVSCKITD 208
+NLK L L +C+IT+
Sbjct: 63 NLKNLKSLDLFNCEITN 79
>gi|28827813 NLR family, pyrin domain containing 14 [Homo sapiens]
Length = 1093
Score = 35.8 bits (81), Expect = 0.048
Identities = 49/219 (22%), Positives = 92/219 (42%), Gaps = 32/219 (14%)
Query: 51 DKLTDEGLKQLGSKCRELKDIHFGQCY--KISDEGMIVIAKGCLKLQRIYMQENKLVTDQ 108
+ L D+G++ L R K CY ++S E + GC L + +L
Sbjct: 796 NNLLDDGVQLLCEALRHPK------CYLERLSLESCGLTEAGCEYLSLALISNKRLT--- 846
Query: 109 SVKAFAEHCPELQYVGFMGCSVTSKGVIHLTKLRNLSSLDLR--HITELDNETVMEIVKR 166
C +G G + S + H L SL LR H T L +E + +
Sbjct: 847 ------HLCLADNVLGDGGVKLMSDALQHAQC--TLKSLVLRRCHFTSLSSEYLSTSLLH 898
Query: 167 CKNLSSLNLCLNWIIND---RCVEVIAKEGQNLKELYLVSCKITDYALIAIGRYSM---T 220
K+L+ L+L NW+ ++ +V NL++L L+ C +T+ + + +
Sbjct: 899 NKSLTHLDLGSNWLQDNGVKLLCDVFRHPSCNLQDLELMGCVLTNACCLDLASVILNNPN 958
Query: 221 IETVDVGWCKEITDQGATLIAQSSK----SLRYLGLMRC 255
+ ++D+G ++ D G ++ + + +++ LGL C
Sbjct: 959 LRSLDLG-NNDLQDDGVKILCDALRYPNCNIQRLGLEYC 996
>gi|6912604 acidic nuclear phosphoprotein 32C [Homo sapiens]
Length = 234
Score = 34.7 bits (78), Expect = 0.11
Identities = 30/108 (27%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 101 ENKLVTDQSVKAFAEHCPELQYVGFMGCSVTSKGVIHLTKLRNLSSLDLRHITELDNETV 160
+N + ++A + EL+++ + +TS + L KL+ L L+LR L+
Sbjct: 25 DNSRSNEGKLEALTDEFEELEFLSKINGGLTS--ISDLPKLK-LRKLELRVSGGLE---- 77
Query: 161 MEIVKRCKNLSSLNLCLNWIINDRCVEVIAKEGQNLKELYLVSCKITD 208
+ ++C NL+ L L N I + +E + K+ +NLK L L +C++T+
Sbjct: 78 -VLAEKCPNLTHLYLSGNKIKDLSTIEPL-KQLENLKSLDLFNCEVTN 123
Score = 30.8 bits (68), Expect = 1.5
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 94 LQRIYMQENKLVTDQSVKAFAEHCPELQYVGFMGCSVTSKGVIH-LTKLRNLSSLDLRH- 151
L ++ +++ +L ++ AE CP L ++ G + I L +L NL SLDL +
Sbjct: 60 LPKLKLRKLELRVSGGLEVLAEKCPNLTHLYLSGNKIKDLSTIEPLKQLENLKSLDLFNC 119
Query: 152 -ITELDNETVMEIVKRCKNLSSLNLC 176
+T L N+ + K L+ L+ C
Sbjct: 120 EVTNL-NDYGENVFKLLLQLTYLDSC 144
>gi|8923179 F-box and leucine-rich repeat protein 12 [Homo sapiens]
Length = 326
Score = 33.9 bits (76), Expect = 0.18
Identities = 29/137 (21%), Positives = 64/137 (46%), Gaps = 2/137 (1%)
Query: 40 PLLQKVHVGNQDKLTDEGLKQLGSKCRELKDIHFGQCYKISDEGMIVIAKGCLKLQRIYM 99
PLL+ + + DE L+ L ++ R L+ + G Y++++ G+ + LQR+ +
Sbjct: 151 PLLECIVLDRVPAFRDEHLQGL-TRFRALRSLVLGGTYRVTETGLDAGLQELSYLQRLEV 209
Query: 100 QENKLVTDQSVKAFAEHCPELQYVGFMGCSVTSKGVIHLTKLRNLSSLDLR-HITELDNE 158
L D ++ A + H +++ + +++ G+ L + L SL L+ + +
Sbjct: 210 LGCTLSADSTLLAISRHLRDVRKIRLTVRGLSAPGLAVLEGMPALESLCLQGPLVTPEMP 269
Query: 159 TVMEIVKRCKNLSSLNL 175
+ EI+ C + L +
Sbjct: 270 SPTEILSSCLTMPKLRV 286
>gi|16306584 F-box and leucine-rich repeat protein 3 [Homo sapiens]
Length = 428
Score = 33.5 bits (75), Expect = 0.24
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 22 YRCKQLSDTSIIAVASHCP-LLQKVHVGNQDKLTDEGLKQLGSKCRELKDIHFGQCYKIS 80
Y + +S + V CP L++ V N + DE L ++ +C+ L I G+C ++S
Sbjct: 314 YFGRSVSKDVLGRVGMTCPRLVELVVCANGLRPLDEELIRIAERCKNLSAIGLGEC-EVS 372
Query: 81 DEGMIVIAKGC-LKLQRIYMQENKLVTDQSVKAFAEHCPELQYVG 124
+ K C +L ++ + E L+ DQ H +++G
Sbjct: 373 CSAFVEFVKMCGGRLSQLSIMEEVLIPDQKYSLEQIHWEVSKHLG 417
>gi|116268109 nucleotide-binding oligomerization domains 27 [Homo
sapiens]
Length = 1866
Score = 32.7 bits (73), Expect = 0.41
Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 12/101 (11%)
Query: 90 GCLKLQRIYMQENKLVTDQSVKAFAEHCP---ELQYVGFMGCSVTSKGVIHLTKLRNLSS 146
GC +++ + + K D +A + P LQ +G G +T++G+ HL K L
Sbjct: 684 GCGQIENLSFKSRKC-GDAFAEALSRSLPTMGRLQMLGLAGSKITARGISHLVKALPLCP 742
Query: 147 LDLRHITELDNE-------TVMEIVKRCKNLSSLNLCLNWI 180
L+ ++ DN+ ++E++ L L+L N I
Sbjct: 743 -QLKEVSFRDNQLSDQVVLNIVEVLPHLPRLRKLDLSSNSI 782
>gi|55742693 zyg-11 homolog B [Homo sapiens]
Length = 744
Score = 32.3 bits (72), Expect = 0.53
Identities = 28/129 (21%), Positives = 63/129 (48%), Gaps = 5/129 (3%)
Query: 132 SKGVIHLTKLRNLSSLDLRHITELDNETVMEIVKRCKNLSSLNLCLNWIINDRCVEVIAK 191
++ + + L L SLD+ + + D ++ R K+L+ +L + + ++V+ +
Sbjct: 176 NEDLAEVASLPRLESLDISNTSITDITALLACKDRLKSLTMHHLKCLKMTTTQILDVV-R 234
Query: 192 EGQNLKELYLVSCK--ITDYALIAIGRYSM--TIETVDVGWCKEITDQGATLIAQSSKSL 247
E ++L L + K +D AL + + + + ++DV K +TD+ Q S+
Sbjct: 235 ELKHLNHLDISDDKQFTSDIALRLLEQKDILPNLVSLDVSGRKHVTDKAVEAFIQQRPSM 294
Query: 248 RYLGLMRCD 256
+++GL+ D
Sbjct: 295 QFVGLLATD 303
>gi|16306574 F-box and leucine-rich repeat protein 5 isoform 2 [Homo
sapiens]
Length = 565
Score = 31.6 bits (70), Expect = 0.91
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Query: 24 CKQLSDTS--IIAVASHCPLLQKVHVGNQDKLTDEGLKQLGSKCRELKDIHFGQCYKISD 81
C Q++D ++ + P L+ +++ +T GL+ L S C L D +F C I+
Sbjct: 482 CYQITDHGLRVLTLGGGLPYLEHLNLSGCLTITGAGLQDLVSACPSLNDEYFYYCDNING 541
Query: 82 EGMIVIAKGCLKLQ 95
A GC LQ
Sbjct: 542 PHADT-ASGCQNLQ 554
>gi|16306572 F-box and leucine-rich repeat protein 5 isoform 1 [Homo
sapiens]
Length = 691
Score = 31.6 bits (70), Expect = 0.91
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Query: 24 CKQLSDTS--IIAVASHCPLLQKVHVGNQDKLTDEGLKQLGSKCRELKDIHFGQCYKISD 81
C Q++D ++ + P L+ +++ +T GL+ L S C L D +F C I+
Sbjct: 608 CYQITDHGLRVLTLGGGLPYLEHLNLSGCLTITGAGLQDLVSACPSLNDEYFYYCDNING 667
Query: 82 EGMIVIAKGCLKLQ 95
A GC LQ
Sbjct: 668 PHADT-ASGCQNLQ 680
>gi|16306576 F-box and leucine-rich repeat protein 6 isoform 1 [Homo
sapiens]
Length = 539
Score = 31.6 bits (70), Expect = 0.91
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 93 KLQRIYMQENKLVTDQSVKAFAEHCPELQYVGFMGC-SVTSKGVIHLTK-LRNLSSLDLR 150
+LQR+ + K +K E CP L ++ GC VT+ ++ L K L SLDL+
Sbjct: 195 QLQRLTLIHWKSQVHPVLKLVGECCPRLTFLKLSGCHGVTADALVMLAKACCQLHSLDLQ 254
Query: 151 H 151
H
Sbjct: 255 H 255
>gi|239754160 PREDICTED: similar to hCG1980490 [Homo sapiens]
Length = 348
Score = 30.8 bits (68), Expect = 1.5
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 12/75 (16%)
Query: 50 QDKLTDEGLKQLGSKCRELKDIHFGQCYKISDEGMIVIAKGCLKLQRIYMQENKLVTDQS 109
+D LTD GL QLG REL+ Q ++ ++ I I + KL+ ++++ + V D
Sbjct: 199 EDTLTDSGLSQLGRALRELE----AQRQRLREQHQIWIRE---KLK--HLEQKEEVADDQ 249
Query: 110 VK---AFAEHCPELQ 121
VK A E C E Q
Sbjct: 250 VKGLVAEEEACEERQ 264
>gi|239748674 PREDICTED: similar to hCG1980490 [Homo sapiens]
Length = 348
Score = 30.8 bits (68), Expect = 1.5
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 12/75 (16%)
Query: 50 QDKLTDEGLKQLGSKCRELKDIHFGQCYKISDEGMIVIAKGCLKLQRIYMQENKLVTDQS 109
+D LTD GL QLG REL+ Q ++ ++ I I + KL+ ++++ + V D
Sbjct: 199 EDTLTDSGLSQLGRALRELE----AQRQRLREQHQIWIRE---KLK--HLEQKEEVADDQ 249
Query: 110 VK---AFAEHCPELQ 121
VK A E C E Q
Sbjct: 250 VKGLVAEEEACEERQ 264
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.135 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,164,138
Number of Sequences: 37866
Number of extensions: 401455
Number of successful extensions: 1252
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 998
Number of HSP's gapped (non-prelim): 131
length of query: 303
length of database: 18,247,518
effective HSP length: 102
effective length of query: 201
effective length of database: 14,385,186
effective search space: 2891422386
effective search space used: 2891422386
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.