LOC642511 21890

Name: LOC642511	Sequence: fasta or formatted (348aa)		NCBI GI: 239754160
Description: PREDICTED: similar to hCG1980490		Not currently referenced in the text
Other entries for this name: alt mRNA {348aa} PREDICTED: similar to hCG1980490
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.6 30 2 C cysteine 1.7 6 2 D aspartate 4.9 17 2 E glutamate 10.9 38 3 F phenylalanine 0.9 3 1 G glycine 7.5 26 2 H histidine 1.4 5 2 I isoleucine 1.7 6 1 K lysine 1.7 6 1 L leucine 16.7 58 3 M methionine 1.1 4 1 N asparagine 2.0 7 2 P proline 5.2 18 2 Q glutamine 9.2 32 2 R arginine 7.2 25 2 S serine 5.5 19 1 T threonine 4.6 16 1 V valine 6.6 23 2 W tryptophan 1.7 6 1 Y tyrosine 0.9 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to hCG1980490 LOC642511 1.000 PREDICTED: similar to hCG1980490 CROCC 0.032 ciliary rootlet coiled-coil PLEC1 0.032 plectin 1 isoform 11 PLEC1 0.032 plectin 1 isoform 10 PLEC1 0.032 plectin 1 isoform 8 PLEC1 0.032 plectin 1 isoform 7 PLEC1 0.032 plectin 1 isoform 6 PLEC1 0.032 plectin 1 isoform 3 PLEC1 0.032 plectin 1 isoform 2 PLEC1 0.032 plectin 1 isoform 1 DEF6 0.029 differentially expressed in FDCP 6 homolog CEP164 0.027 centrosomal protein 164kDa NUMA1 0.027 nuclear mitotic apparatus protein 1 PPL 0.026 periplakin CIT 0.026 citron ZNF853 0.026 zinc finger protein 853 LOC283767 0.026 golgi autoantigen, golgin subfamily a-like TCHH 0.026 trichohyalin TPM4 0.024 tropomyosin 4 isoform 2 LOC283685 0.023 PREDICTED: golgi autoantigen, golgin subfamily a-li... LOC727832 0.023 golgi autoantigen, golgin subfamily a-like LOC283685 0.023 PREDICTED: golgi autoantigen, golgin subfamily a-li... LOC440243 0.023 PREDICTED: Putative golgin subfamily A member 6-lik... CGN 0.023 cingulin LOC647042 0.021 PREDICTED: hypothetical protein isoform 1 TPM4 0.021 tropomyosin 4 isoform 1 MYH14 0.021 myosin, heavy chain 14 isoform 1 MYH14 0.021 myosin, heavy chain 14 isoform 2 MYH14 0.021 myosin, heavy chain 14 isoform 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.