Search of human proteins with 24308454

Search of human proteins with 24308454

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|24308454 hypothetical protein LOC254228 [Homo sapiens]
         (309 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|24308454 hypothetical protein LOC254228 [Homo sapiens]             640   0.0  
gi|62988336 hypothetical protein LOC441168 [Homo sapiens]             231   6e-61
gi|21361521 calcium homeostasis modulator 2 [Homo sapiens]            122   5e-28
gi|193211395 calcium homeostasis modulator 3 [Homo sapiens]            87   2e-17
gi|194440685 calcium homeostasis modulator 1 [Homo sapiens]            75   6e-14
gi|23308563 hypothetical protein LOC221301 [Homo sapiens]              46   5e-05
gi|239756957 PREDICTED: dynein, axonemal, heavy chain 17 [Homo s...    30   2.1  
gi|239751459 PREDICTED: dynein, axonemal, heavy chain 17 [Homo s...    30   2.1  
gi|239745966 PREDICTED: dynein, axonemal, heavy chain 17 [Homo s...    30   2.1  
gi|67944634 exocyst complex component 1 isoform 1 [Homo sapiens]       30   2.7  
gi|30410716 exocyst complex component 1 isoform 2 [Homo sapiens]       30   2.7  
gi|30410720 exocyst complex component 1 isoform 1 [Homo sapiens]       30   2.7  
gi|239756622 PREDICTED: polycystic kidney disease 1-like 3 [Homo...    30   3.5  
gi|239751108 PREDICTED: polycystic kidney disease 1-like 3 [Homo...    30   3.5  
gi|239745596 PREDICTED: polycystin 1-like 3 [Homo sapiens]             30   3.5  
gi|31559825 polycystin 1-like 3 [Homo sapiens]                         30   3.5  
gi|41350212 bromodomain containing 7 [Homo sapiens]                    30   3.5  
gi|8923870 solute carrier family 22 member 11 [Homo sapiens]           29   6.0  
gi|4501989 alpha-fetoprotein precursor [Homo sapiens]                  28   7.9  
gi|75905803 parathyroid hormone-responsive B1 isoform 4 [Homo sa...    28   7.9  
gi|75905801 parathyroid hormone-responsive B1 isoform 3 [Homo sa...    28   7.9  
gi|38569434 parathyroid hormone-responsive B1 isoform 2 [Homo sa...    28   7.9  
gi|38569432 parathyroid hormone-responsive B1 isoform 1 [Homo sa...    28   7.9  

>gi|24308454 hypothetical protein LOC254228 [Homo sapiens]
          Length = 309

 Score =  640 bits (1652), Expect = 0.0
 Identities = 309/309 (100%), Positives = 309/309 (100%)

Query: 1   MDAFQGILKFFLNQKTVIGYSFMALLTVGSERLFSVVAFKCPCSTENMTYGLVFLFAPAW 60
           MDAFQGILKFFLNQKTVIGYSFMALLTVGSERLFSVVAFKCPCSTENMTYGLVFLFAPAW
Sbjct: 1   MDAFQGILKFFLNQKTVIGYSFMALLTVGSERLFSVVAFKCPCSTENMTYGLVFLFAPAW 60

Query: 61  VLLILGFFLNNRSWRLFTGCCVNPRKIFPRGHSCRFFYVLGQITLSSLVAPVMWLSVALL 120
           VLLILGFFLNNRSWRLFTGCCVNPRKIFPRGHSCRFFYVLGQITLSSLVAPVMWLSVALL
Sbjct: 61  VLLILGFFLNNRSWRLFTGCCVNPRKIFPRGHSCRFFYVLGQITLSSLVAPVMWLSVALL 120

Query: 121 NGTFYECAMSGTRSSGLLELICKGKPKECWEELHKVSCGKTSMLPTVNEELKLSLQAQSQ 180
           NGTFYECAMSGTRSSGLLELICKGKPKECWEELHKVSCGKTSMLPTVNEELKLSLQAQSQ
Sbjct: 121 NGTFYECAMSGTRSSGLLELICKGKPKECWEELHKVSCGKTSMLPTVNEELKLSLQAQSQ 180

Query: 181 ILGWCLICSASFFSLLTTCYARCRSKVSYLQLSFWKTYAQKEKEQLENTFLDYANKLSER 240
           ILGWCLICSASFFSLLTTCYARCRSKVSYLQLSFWKTYAQKEKEQLENTFLDYANKLSER
Sbjct: 181 ILGWCLICSASFFSLLTTCYARCRSKVSYLQLSFWKTYAQKEKEQLENTFLDYANKLSER 240

Query: 241 NLKCFFENKRPDPFPMPTFAAWEAASELHSFHQSQQHYSTLHRVVDNGLQLSPEDDETTM 300
           NLKCFFENKRPDPFPMPTFAAWEAASELHSFHQSQQHYSTLHRVVDNGLQLSPEDDETTM
Sbjct: 241 NLKCFFENKRPDPFPMPTFAAWEAASELHSFHQSQQHYSTLHRVVDNGLQLSPEDDETTM 300

Query: 301 VLVGTAHNM 309
           VLVGTAHNM
Sbjct: 301 VLVGTAHNM 309


>gi|62988336 hypothetical protein LOC441168 [Homo sapiens]
          Length = 315

 Score =  231 bits (589), Expect = 6e-61
 Identities = 116/287 (40%), Positives = 173/287 (60%), Gaps = 7/287 (2%)

Query: 1   MDAFQGILKFFLNQKTVIGYSFMALLTVGSERLFSVVAFKCPCSTE-NMTYGLVFLFAPA 59
           M+ F+ +L   +   + +GY  + LLT G ER+FS VAF+CPCS   N+ YGLVFL  PA
Sbjct: 1   MEKFRAVLDLHVKHHSALGYGLVTLLTAGGERIFSAVAFQCPCSAAWNLPYGLVFLLVPA 60

Query: 60  WVLLILGFFLNNRSWRLFTGCCVNPRKIFPRGHSCRFFYVLGQITLSSLVAPVMWLSVAL 119
             L +LG+ L+ R+WRL TGCC + R     G + R   V  QI+ ++ +AP+ W++VAL
Sbjct: 61  LALFLLGYVLSARTWRLLTGCCSSARASC--GSALRGSLVCTQISAAAALAPLTWVAVAL 118

Query: 120 LNGTFYECAMSGTRSSGLLELICKGKPKECWEELHKVSCGKTSMLPTVNEELKLSLQAQS 179
           L G FYECA +G  S+   + +C G+ + C  EL  V C +        ++L   L+AQS
Sbjct: 119 LGGAFYECAATG--SAAFAQRLCLGRNRSCAAELPLVPCNQAKASDV--QDLLKDLKAQS 174

Query: 180 QILGWCLICSASFFSLLTTCYARCRSKVSYLQLSFWKTYAQKEKEQLENTFLDYANKLSE 239
           Q+LGW LI       L+ T   RC S VS+LQL FWK Y ++E++ L++   ++A +L++
Sbjct: 175 QVLGWILIAVVIIILLIFTSVTRCLSPVSFLQLKFWKIYLEQEQQILKSKATEHATELAK 234

Query: 240 RNLKCFFENKRPDPFPMPTFAAWEAASELHSFHQSQQHYSTLHRVVD 286
            N+KCFFE   P  +  P+   W+  S L++F+   Q+YS LH+ V+
Sbjct: 235 ENIKCFFEGSHPKEYNTPSMKEWQQISSLYTFNPKGQYYSMLHKYVN 281


>gi|21361521 calcium homeostasis modulator 2 [Homo sapiens]
          Length = 323

 Score =  122 bits (305), Expect = 5e-28
 Identities = 94/296 (31%), Positives = 137/296 (46%), Gaps = 19/296 (6%)

Query: 4   FQGILKFFLNQKTVIGYSFMALLTVGSERLFSVVAFKCPCS-TENMTYGLVFLFAPAWVL 62
           F+ +  FF ++  +I    +AL TVGS+ LFSVVAF CPCS   N  YGL  +  PA VL
Sbjct: 9   FRFLSLFFKSKDVMIFNGLVALGTVGSQELFSVVAFHCPCSPARNYLYGLAAIGVPALVL 68

Query: 63  LILGFFLNNRSWRLFTGCCVNPRKIFPRGHSCRFFYVLGQITLSSLVAPVMWLSVALLNG 122
            I+G  LNN +W L   C     K      +   F +L  I   + VAPV W  ++LL G
Sbjct: 69  FIIGIILNNHTWNLVAECQHRRTK---NCSAAPTFLLLSSILGRAAVAPVTWSVISLLRG 125

Query: 123 TFYECAMSGTRSSGLLELICKGKPK-ECWEELHKVSCGKT-SMLPTVNEELKLSLQAQSQ 180
             Y CA+S       L    +  P     E L +  C +    L    EE+   L+ +SQ
Sbjct: 126 EAYVCALSEFVDPSSLTAREEHFPSAHATEILARFPCKENPDNLSDFREEVSRRLRYESQ 185

Query: 181 ILGWCLICSASFFSLLTTCYARCRSKVSYLQLSFWKTYAQKEKEQLENTFLDYANKLSER 240
           + GW LI   +    LT C     S +SY Q ++W  Y   E +  + T   ++  L+  
Sbjct: 186 LFGWLLIGVVAILVFLTKCLKHYCSPLSYRQEAYWAQYRANEDQLFQRTAEVHSRVLAAN 245

Query: 241 NLKCFFE----NKRPDP----FPM---PTFAAWEAASELHSFHQSQ--QHYSTLHR 283
           N++ FF     NK  +     FP+        W A + ++ + ++Q    YS LH+
Sbjct: 246 NVRRFFGFVALNKDDEELIANFPVEGTQPRPQWNAITGVYLYRENQGLPLYSRLHK 301


>gi|193211395 calcium homeostasis modulator 3 [Homo sapiens]
          Length = 344

 Score = 86.7 bits (213), Expect = 2e-17
 Identities = 63/265 (23%), Positives = 106/265 (40%), Gaps = 25/265 (9%)

Query: 1   MDAFQGILKFFLNQKTVIGYSFMALLTVGSERLFSVVAFKCPCSTE-NMTYGLVFLFAPA 59
           MD F+ + + F +    +      LL   + +L+S   F CPC    N  YGL  L  P 
Sbjct: 1   MDKFRMLFQHFQSSSESVMNGICLLLAAVTVKLYSSFDFNCPCLVHYNALYGLGLLLTPP 60

Query: 60  WVLLILGFFLNNRS------WRLFTGCCVNPRKIFPRGHSCR----FFYVLGQITLSSLV 109
             L + G   N +S      WR             P GH  +      Y+   +   +L 
Sbjct: 61  LALFLCGLLANRQSVVMVEEWRR------------PAGHRRKDPGIIRYMCSSVLQRALA 108

Query: 110 APVMWLSVALLNGTFYECAMSGTRSSGLLELICKGKPKECWEELHKVSCGKTSML--PTV 167
           AP++W+ +ALL+G  + CA S +             P +    L KV C +  ++     
Sbjct: 109 APLVWILLALLDGKCFVCAFSSSVDPEKFLDFANMTPSQVQLFLAKVPCKEDELVRDSPA 168

Query: 168 NEELKLSLQAQSQILGWCLICSASFFSLLTTCYARCRSKVSYLQLSFWKTYAQKEKEQLE 227
            + +   L+  SQ +GW +       + L  C   C  +  +LQ  +W  Y   E++  +
Sbjct: 169 RKAVSRYLRCLSQAIGWSVTLLLIIAAFLARCLRPCFDQTVFLQRRYWSNYVDLEQKLFD 228

Query: 228 NTFLDYANKLSERNLKCFFENKRPD 252
            T  ++A   + R +  FF + R +
Sbjct: 229 ETCCEHARDFAHRCVLHFFASMRSE 253


>gi|194440685 calcium homeostasis modulator 1 [Homo sapiens]
          Length = 346

 Score = 75.5 bits (184), Expect = 6e-14
 Identities = 61/264 (23%), Positives = 107/264 (40%), Gaps = 20/264 (7%)

Query: 1   MDAFQGILKFFLNQKTVIGYSFMALLTVGSERLFSVVAFKCPCSTE-NMTYGLVFLFAPA 59
           MD F+ I +F  + +         ++ + S +++S   F CPC    N  Y    L AP 
Sbjct: 2   MDKFRMIFQFLQSNQESFMNGICGIMALASAQMYSAFDFNCPCLPGYNAAYSAGILLAPP 61

Query: 60  WVLLILGFFLNNR------SWRLFTGCCVNPRKIFPRGHSCRFFYVLGQITLSSLVAPVM 113
            VL +LG  +NN        W+   G       +          Y+   +   +L+APV+
Sbjct: 62  LVLFLLGLVMNNNVSMLAEEWKRPLGRRAKDPAVLR--------YMFCSMAQRALIAPVV 113

Query: 114 WLSVALLNGTFYECAMSGTRSSGLLE--LICKGKPK-ECWEELHKVSCGKT--SMLPTVN 168
           W++V LL+G  + CA         L    +  G P  E    L +V C +          
Sbjct: 114 WVAVTLLDGKCFLCAFCTAVPVSALGNGSLAPGLPAPELARLLARVPCPEIYDGDWLLAR 173

Query: 169 EELKLSLQAQSQILGWCLICSASFFSLLTTCYARCRSKVSYLQLSFWKTYAQKEKEQLEN 228
           E     L+  SQ LGW  +   +  + +      C ++ ++L+  +W  Y   E++  + 
Sbjct: 174 EVAVRYLRCISQALGWSFVLLTTLLAFVVRSVRPCFTQAAFLKSKYWSHYIDIERKLFDE 233

Query: 229 TFLDYANKLSERNLKCFFENKRPD 252
           T  ++A   ++  ++ FFE    D
Sbjct: 234 TCTEHAKAFAKVCIQQFFEAMNHD 257


>gi|23308563 hypothetical protein LOC221301 [Homo sapiens]
          Length = 128

 Score = 45.8 bits (107), Expect = 5e-05
 Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 15/128 (11%)

Query: 181 ILGWCLICSASFFSLLTTCYARCRSKVSYLQLSFWKTYAQKEKEQLENTFLDYANKLSER 240
           +LGW LI  A+  +L++ C A+C S ++ LQ  +W ++ Q E+E  E     ++  L   
Sbjct: 1   MLGWILITLATIAALVSCCVAKCCSPLTSLQHCYWTSHLQNERELFEQAAEQHSRLLMMH 60

Query: 241 NLKCFF----ENKRPDPFPMPTFAAWEAASE---LHSFHQSQQHYSTLHRVVD------- 286
            +K  F     ++      +P+   W+  S    L      Q HYS L   VD       
Sbjct: 61  RIKKLFGFIPGSEDVKHIRIPSCQDWKDISVPTLLCMGDDLQGHYSFLGNRVDEDNEEDR 120

Query: 287 -NGLQLSP 293
             G++L P
Sbjct: 121 SRGIELKP 128


>gi|239756957 PREDICTED: dynein, axonemal, heavy chain 17 [Homo
           sapiens]
          Length = 4470

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 3/51 (5%)

Query: 241 NLKCFFENKRPDPFPMPTFAAWEAASELHSFHQSQQHYSTLHRVVDNGLQL 291
           N+K FF++K P P+  P+  A+   S ++SF Q  Q    L++     L+L
Sbjct: 393 NMKLFFKDKEPVPWEFPSSLAF---SRINSFFQRIQTIEELYKTAIEFLKL 440


>gi|239751459 PREDICTED: dynein, axonemal, heavy chain 17 [Homo
           sapiens]
          Length = 4485

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 3/51 (5%)

Query: 241 NLKCFFENKRPDPFPMPTFAAWEAASELHSFHQSQQHYSTLHRVVDNGLQL 291
           N+K FF++K P P+  P+  A+   S ++SF Q  Q    L++     L+L
Sbjct: 393 NMKLFFKDKEPVPWEFPSSLAF---SRINSFFQRIQTIEELYKTAIEFLKL 440


>gi|239745966 PREDICTED: dynein, axonemal, heavy chain 17 [Homo
           sapiens]
          Length = 4485

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 3/51 (5%)

Query: 241 NLKCFFENKRPDPFPMPTFAAWEAASELHSFHQSQQHYSTLHRVVDNGLQL 291
           N+K FF++K P P+  P+  A+   S ++SF Q  Q    L++     L+L
Sbjct: 393 NMKLFFKDKEPVPWEFPSSLAF---SRINSFFQRIQTIEELYKTAIEFLKL 440


>gi|67944634 exocyst complex component 1 isoform 1 [Homo sapiens]
          Length = 894

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)

Query: 204 RSKVSYLQLSFW-KTYAQKEKEQLENTFLDYANKLSERNLKCFFE 247
           R  + Y +L  W K+    + E L   ++DY ++L ER +K FFE
Sbjct: 383 RDLLRYAKLMEWLKSTDYGKYEGLTKNYMDYLSRLYEREIKDFFE 427


>gi|30410716 exocyst complex component 1 isoform 2 [Homo sapiens]
          Length = 879

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)

Query: 204 RSKVSYLQLSFW-KTYAQKEKEQLENTFLDYANKLSERNLKCFFE 247
           R  + Y +L  W K+    + E L   ++DY ++L ER +K FFE
Sbjct: 383 RDLLRYAKLMEWLKSTDYGKYEGLTKNYMDYLSRLYEREIKDFFE 427


>gi|30410720 exocyst complex component 1 isoform 1 [Homo sapiens]
          Length = 894

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)

Query: 204 RSKVSYLQLSFW-KTYAQKEKEQLENTFLDYANKLSERNLKCFFE 247
           R  + Y +L  W K+    + E L   ++DY ++L ER +K FFE
Sbjct: 383 RDLLRYAKLMEWLKSTDYGKYEGLTKNYMDYLSRLYEREIKDFFE 427


>gi|239756622 PREDICTED: polycystic kidney disease 1-like 3 [Homo
            sapiens]
          Length = 1732

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 1/74 (1%)

Query: 165  PTVNEELKLSLQAQSQILGWCLICSASFFSLLTTCYARCRSKVSYLQLSFWKTYAQKEKE 224
            PT + E  L  +   ++ G  L+       L+T  Y+   S   YL  + WKT++ +  E
Sbjct: 1265 PTKHPERTLKKKKLFKLTGDILVQILFLTLLMTAIYSAKNSNRFYLHQAIWKTFSHQFSE 1324

Query: 225  -QLENTFLDYANKL 237
             +L   F  +AN +
Sbjct: 1325 IKLLQDFYPWANHI 1338


>gi|239751108 PREDICTED: polycystic kidney disease 1-like 3 [Homo
            sapiens]
          Length = 1731

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 1/74 (1%)

Query: 165  PTVNEELKLSLQAQSQILGWCLICSASFFSLLTTCYARCRSKVSYLQLSFWKTYAQKEKE 224
            PT + E  L  +   ++ G  L+       L+T  Y+   S   YL  + WKT++ +  E
Sbjct: 1264 PTKHPERTLKKKKLFKLTGDILVQILFLTLLMTAIYSAKNSNRFYLHQAIWKTFSHQFSE 1323

Query: 225  -QLENTFLDYANKL 237
             +L   F  +AN +
Sbjct: 1324 IKLLQDFYPWANHI 1337


>gi|239745596 PREDICTED: polycystin 1-like 3 [Homo sapiens]
          Length = 1731

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 1/74 (1%)

Query: 165  PTVNEELKLSLQAQSQILGWCLICSASFFSLLTTCYARCRSKVSYLQLSFWKTYAQKEKE 224
            PT + E  L  +   ++ G  L+       L+T  Y+   S   YL  + WKT++ +  E
Sbjct: 1264 PTKHPERTLKKKKLFKLTGDILVQILFLTLLMTAIYSAKNSNRFYLHQAIWKTFSHQFSE 1323

Query: 225  -QLENTFLDYANKL 237
             +L   F  +AN +
Sbjct: 1324 IKLLQDFYPWANHI 1337


>gi|31559825 polycystin 1-like 3 [Homo sapiens]
          Length = 1732

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 1/74 (1%)

Query: 165  PTVNEELKLSLQAQSQILGWCLICSASFFSLLTTCYARCRSKVSYLQLSFWKTYAQKEKE 224
            PT + E  L  +   ++ G  L+       L+T  Y+   S   YL  + WKT++ +  E
Sbjct: 1265 PTKHPERTLKKKKLFKLTGDILVQILFLTLLMTAIYSAKNSNRFYLHQAIWKTFSHQFSE 1324

Query: 225  -QLENTFLDYANKL 237
             +L   F  +AN +
Sbjct: 1325 IKLLQDFYPWANHI 1338


>gi|41350212 bromodomain containing 7 [Homo sapiens]
          Length = 651

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 2/45 (4%)

Query: 210 LQLSFWKTYAQKEKEQLENTFLDYANKLSER--NLKCFFENKRPD 252
           L+  F     ++E+EQL+    +   KL+ R  N +C FE ++PD
Sbjct: 302 LEDKFKSNNLEREQEQLDRIVKESGGKLTRRLVNSQCEFERRKPD 346


>gi|8923870 solute carrier family 22 member 11 [Homo sapiens]
          Length = 550

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 32/154 (20%), Positives = 65/154 (42%), Gaps = 16/154 (10%)

Query: 6   GILKFFLNQKTVIGYSFMALLTVGSERLFSVVAFKCPCSTENMT-YGLVFLFAPAWVLLI 64
           G+L +   +K ++ +  + L   G+  +F+   F   C    +  +G+  +F  +  L++
Sbjct: 161 GLLSYRFGRKPMLSWCCLQLAVAGTSTIFAPT-FVIYCGLRFVAAFGMAGIFLSSLTLMV 219

Query: 65  LGFFLNNRSWRL-FTGCCVNPRKIFPRGHSCRFFYVLGQITLSSLVAPVMWLSVALLNGT 123
                + R+  +   GC  +  +    G +    + L       L A V + +++L++  
Sbjct: 220 EWTTTSRRAVTMTVVGCAFSAGQAALGGLA----FALRDWRTLQLAASVPFFAISLISWW 275

Query: 124 FYECAMSGTRSSGLLELICKGKPKECWEELHKVS 157
             E A           LI KGKP +  +EL KV+
Sbjct: 276 LPESARW---------LIIKGKPDQALQELRKVA 300


>gi|4501989 alpha-fetoprotein precursor [Homo sapiens]
          Length = 609

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 222 EKEQLENT-FLDYANKLSERNLKCFFENKRPDPFPMPTFAAWEAASELHSFHQSQQHY 278
           EKE LE     D  ++  E    CF  +K+P P  +P F   E  +   ++ + ++ +
Sbjct: 101 EKEILEKYGHSDCCSQSEEGRHNCFLAHKKPTPASIPLFQVPEPVTSCEAYEEDRETF 158


>gi|75905803 parathyroid hormone-responsive B1 isoform 4 [Homo
           sapiens]
          Length = 882

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 9/132 (6%)

Query: 155 KVSCGKTSMLPTVNEELKLSLQAQSQILGWCLICSASFFSLLTTCYARCRSKVSYLQLSF 214
           K+S  + ++L    E   L LQ  +Q LGW     A+   LL TC ++  SK   L L+ 
Sbjct: 738 KLSADQVAIL----EAAFLPLQEDTQELGWEETVDAAISHLLKTCLSK-SSKEQALNLNS 792

Query: 215 WKTYAQKEKEQLENTFLDYANKLSERNLKCF-FENKRPDPFPMPTFAAWEAASEL--HSF 271
            +    K+  QL+       ++LS+    C   +   P    MP        S+L   S 
Sbjct: 793 -QLNIPKDTSQLKKHITLLCDRLSKGGRLCLSTDAAAPQTMVMPGGCTTIPESDLEERSV 851

Query: 272 HQSQQHYSTLHR 283
            Q      T HR
Sbjct: 852 EQDSTELFTNHR 863


>gi|75905801 parathyroid hormone-responsive B1 isoform 3 [Homo
           sapiens]
          Length = 852

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 9/132 (6%)

Query: 155 KVSCGKTSMLPTVNEELKLSLQAQSQILGWCLICSASFFSLLTTCYARCRSKVSYLQLSF 214
           K+S  + ++L    E   L LQ  +Q LGW     A+   LL TC ++  SK   L L+ 
Sbjct: 708 KLSADQVAIL----EAAFLPLQEDTQELGWEETVDAAISHLLKTCLSK-SSKEQALNLNS 762

Query: 215 WKTYAQKEKEQLENTFLDYANKLSERNLKCF-FENKRPDPFPMPTFAAWEAASEL--HSF 271
            +    K+  QL+       ++LS+    C   +   P    MP        S+L   S 
Sbjct: 763 -QLNIPKDTSQLKKHITLLCDRLSKGGRLCLSTDAAAPQTMVMPGGCTTIPESDLEERSV 821

Query: 272 HQSQQHYSTLHR 283
            Q      T HR
Sbjct: 822 EQDSTELFTNHR 833


>gi|38569434 parathyroid hormone-responsive B1 isoform 2 [Homo
           sapiens]
          Length = 887

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 9/132 (6%)

Query: 155 KVSCGKTSMLPTVNEELKLSLQAQSQILGWCLICSASFFSLLTTCYARCRSKVSYLQLSF 214
           K+S  + ++L    E   L LQ  +Q LGW     A+   LL TC ++  SK   L L+ 
Sbjct: 743 KLSADQVAIL----EAAFLPLQEDTQELGWEETVDAAISHLLKTCLSK-SSKEQALNLNS 797

Query: 215 WKTYAQKEKEQLENTFLDYANKLSERNLKCF-FENKRPDPFPMPTFAAWEAASEL--HSF 271
            +    K+  QL+       ++LS+    C   +   P    MP        S+L   S 
Sbjct: 798 -QLNIPKDTSQLKKHITLLCDRLSKGGRLCLSTDAAAPQTMVMPGGCTTIPESDLEERSV 856

Query: 272 HQSQQHYSTLHR 283
            Q      T HR
Sbjct: 857 EQDSTELFTNHR 868


>gi|38569432 parathyroid hormone-responsive B1 isoform 1 [Homo
           sapiens]
          Length = 847

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 9/132 (6%)

Query: 155 KVSCGKTSMLPTVNEELKLSLQAQSQILGWCLICSASFFSLLTTCYARCRSKVSYLQLSF 214
           K+S  + ++L    E   L LQ  +Q LGW     A+   LL TC ++  SK   L L+ 
Sbjct: 703 KLSADQVAIL----EAAFLPLQEDTQELGWEETVDAAISHLLKTCLSK-SSKEQALNLNS 757

Query: 215 WKTYAQKEKEQLENTFLDYANKLSERNLKCF-FENKRPDPFPMPTFAAWEAASEL--HSF 271
            +    K+  QL+       ++LS+    C   +   P    MP        S+L   S 
Sbjct: 758 -QLNIPKDTSQLKKHITLLCDRLSKGGRLCLSTDAAAPQTMVMPGGCTTIPESDLEERSV 816

Query: 272 HQSQQHYSTLHR 283
            Q      T HR
Sbjct: 817 EQDSTELFTNHR 828


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.325    0.136    0.436 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,012,626
Number of Sequences: 37866
Number of extensions: 533619
Number of successful extensions: 1571
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 1537
Number of HSP's gapped (non-prelim): 39
length of query: 309
length of database: 18,247,518
effective HSP length: 102
effective length of query: 207
effective length of database: 14,385,186
effective search space: 2977733502
effective search space used: 2977733502
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.