| Name: AFP | Sequence: fasta or formatted (609aa) | NCBI GI: 4501989 | |
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Description: alpha-fetoprotein precursor
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Referenced in: Proteins Measured in Common Diagnostic Tests
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 8.2 50 2 C cysteine 5.3 32 2 D aspartate 3.8 23 2 E glutamate 9.7 59 3 F phenylalanine 5.3 32 2 G glycine 4.3 26 1 H histidine 2.6 16 1 I isoleucine 5.6 34 3 K lysine 6.9 42 2 L leucine 9.9 60 2 M methionine 1.5 9 1 N asparagine 3.3 20 1 P proline 3.4 21 2 Q glutamine 6.6 40 2 R arginine 3.6 22 2 S serine 6.2 38 2 T threonine 5.9 36 2 V valine 4.9 30 2 W tryptophan 0.3 2 1 Y tyrosine 2.8 17 2 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 alpha-fetoprotein precursor ALB 0.392 albumin preproprotein AFM 0.376 afamin precursor GC 0.067 vitamin D-binding protein precursor LOC100294358 0.007 PREDICTED: hypothetical protein TLN1 0.006 talin 1 FRMD3 0.004 FERM domain containing 3 ATF3 0.004 activating transcription factor 3 isoform 1 ATF3 0.004 activating transcription factor 3 isoform 1 PCDHGB4 0.004 protocadherin gamma subfamily B, 4 isoform 2 precurs... PCDHGB4 0.004 protocadherin gamma subfamily B, 4 isoform 1 precurs...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
