Search of human proteins with 24308324

Search of human proteins with 24308324

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|24308324 fatty acyl CoA reductase 1 [Homo sapiens]
         (515 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|24308324 fatty acyl CoA reductase 1 [Homo sapiens]                1046   0.0  
gi|31542658 fatty acyl CoA reductase 2 [Homo sapiens]                 663   0.0  
gi|239747878 PREDICTED: hypothetical protein isoform 2 [Homo sap...    91   3e-18
gi|239747880 PREDICTED: hypothetical protein isoform 1 [Homo sap...    87   5e-17
gi|214830928 coiled-coil domain containing 113 isoform 2 [Homo s...    33   0.81 
gi|19923432 coiled-coil domain containing 113 isoform 1 [Homo sa...    33   0.81 
gi|205360941 uridine phosphorylase 2 isoform b [Homo sapiens]          32   1.1  
gi|140560917 myomesin 1 isoform b [Homo sapiens]                       32   1.8  
gi|140560919 myomesin 1 isoform a [Homo sapiens]                       32   1.8  
gi|34577114 cytomatrix protein p110 [Homo sapiens]                     31   2.4  
gi|62953129 macrophage erythroblast attacher isoform 2 [Homo sap...    31   3.1  
gi|27597096 uridine phosphorylase 2 isoform a [Homo sapiens]           30   4.0  
gi|4504507 3 beta-hydroxysteroid dehydrogenase 1 [Homo sapiens]        30   5.3  
gi|4507173 spastic paraplegia 7 isoform 1 [Homo sapiens]               30   6.9  
gi|34878777 ring finger protein 20 [Homo sapiens]                      30   6.9  
gi|20806097 nucleolar complex associated 3 homolog [Homo sapiens]      30   6.9  
gi|109255234 centrosomal protein 290kDa [Homo sapiens]                 29   9.0  
gi|40807469 TRAF interacting protein [Homo sapiens]                    29   9.0  
gi|19111150 angiomotin isoform 2 [Homo sapiens]                        29   9.0  
gi|166064029 angiomotin isoform 1 [Homo sapiens]                       29   9.0  
gi|189181750 human immunodeficiency virus type I enhancer bindin...    29   9.0  
gi|116089331 human immunodeficiency virus type I enhancer bindin...    29   9.0  

>gi|24308324 fatty acyl CoA reductase 1 [Homo sapiens]
          Length = 515

 Score = 1046 bits (2705), Expect = 0.0
 Identities = 515/515 (100%), Positives = 515/515 (100%)

Query: 1   MVSIPEYYEGKNVLLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEVL 60
           MVSIPEYYEGKNVLLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEVL
Sbjct: 1   MVSIPEYYEGKNVLLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEVL 60

Query: 61  SGKLFDRLRDENPDFREKIIAINSELTQPKLALSEEDKEVIIDSTNIIFHCAATVRFNEN 120
           SGKLFDRLRDENPDFREKIIAINSELTQPKLALSEEDKEVIIDSTNIIFHCAATVRFNEN
Sbjct: 61  SGKLFDRLRDENPDFREKIIAINSELTQPKLALSEEDKEVIIDSTNIIFHCAATVRFNEN 120

Query: 121 LRDAVQLNVIATRQLILLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPPPVDPKKLIDS 180
           LRDAVQLNVIATRQLILLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPPPVDPKKLIDS
Sbjct: 121 LRDAVQLNVIATRQLILLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPPPVDPKKLIDS 180

Query: 181 LEWMDDGLVNDITPKLIGDRPNTYIYTKALAEYVVQQEGAKLNVAIVRPSIVGASWKEPF 240
           LEWMDDGLVNDITPKLIGDRPNTYIYTKALAEYVVQQEGAKLNVAIVRPSIVGASWKEPF
Sbjct: 181 LEWMDDGLVNDITPKLIGDRPNTYIYTKALAEYVVQQEGAKLNVAIVRPSIVGASWKEPF 240

Query: 241 PGWIDNFNGPSGLFIAAGKGILRTIRASNNALADLVPVDVVVNMSLAAAWYSGVNRPRNI 300
           PGWIDNFNGPSGLFIAAGKGILRTIRASNNALADLVPVDVVVNMSLAAAWYSGVNRPRNI
Sbjct: 241 PGWIDNFNGPSGLFIAAGKGILRTIRASNNALADLVPVDVVVNMSLAAAWYSGVNRPRNI 300

Query: 301 MVYNCTTGSTNPFHWGEVEYHVISTFKRNPLEQAFRRPNVNLTSNHLLYHYWIAVSHKAP 360
           MVYNCTTGSTNPFHWGEVEYHVISTFKRNPLEQAFRRPNVNLTSNHLLYHYWIAVSHKAP
Sbjct: 301 MVYNCTTGSTNPFHWGEVEYHVISTFKRNPLEQAFRRPNVNLTSNHLLYHYWIAVSHKAP 360

Query: 361 AFLYDIYLRMTGRSPRMMKTITRLHKAMVFLEYFTSNSWVWNTENVNMLMNQLNPEDKKT 420
           AFLYDIYLRMTGRSPRMMKTITRLHKAMVFLEYFTSNSWVWNTENVNMLMNQLNPEDKKT
Sbjct: 361 AFLYDIYLRMTGRSPRMMKTITRLHKAMVFLEYFTSNSWVWNTENVNMLMNQLNPEDKKT 420

Query: 421 FNIDVRQLHWAEYIENYCLGTKKYVLNEEMSGLPAARKHLNKLRNIRYGFNTILVILIWR 480
           FNIDVRQLHWAEYIENYCLGTKKYVLNEEMSGLPAARKHLNKLRNIRYGFNTILVILIWR
Sbjct: 421 FNIDVRQLHWAEYIENYCLGTKKYVLNEEMSGLPAARKHLNKLRNIRYGFNTILVILIWR 480

Query: 481 IFIARSQMARNIWYFVVSLCYKFLSYFRASSTMRY 515
           IFIARSQMARNIWYFVVSLCYKFLSYFRASSTMRY
Sbjct: 481 IFIARSQMARNIWYFVVSLCYKFLSYFRASSTMRY 515


>gi|31542658 fatty acyl CoA reductase 2 [Homo sapiens]
          Length = 515

 Score =  663 bits (1710), Expect = 0.0
 Identities = 304/514 (59%), Positives = 403/514 (78%)

Query: 1   MVSIPEYYEGKNVLLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEVL 60
           M +I  +Y GK++L+TGATGFLGKVL+EKL R+ P +  +Y+LVR KAGQT Q+RV ++L
Sbjct: 1   MSTIAAFYGGKSILITGATGFLGKVLMEKLFRTSPDLKVIYILVRPKAGQTLQQRVFQIL 60

Query: 61  SGKLFDRLRDENPDFREKIIAINSELTQPKLALSEEDKEVIIDSTNIIFHCAATVRFNEN 120
             KLF+++++  P+  EKI AI ++L Q   A+S+ED + ++  TNIIFHCAATVRF++ 
Sbjct: 61  DSKLFEKVKEVCPNVHEKIRAIYADLNQNDFAISKEDMQELLSCTNIIFHCAATVRFDDT 120

Query: 121 LRDAVQLNVIATRQLILLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPPPVDPKKLIDS 180
           LR AVQLNV ATRQL+L+A QM  LE F+H+STAY+ CN KHIDEV+YP PV+PKK+IDS
Sbjct: 121 LRHAVQLNVTATRQLLLMASQMPKLEAFIHISTAYSNCNLKHIDEVIYPCPVEPKKIIDS 180

Query: 181 LEWMDDGLVNDITPKLIGDRPNTYIYTKALAEYVVQQEGAKLNVAIVRPSIVGASWKEPF 240
           LEW+DD ++++ITPKLI D PN Y YTKAL E VVQQE   LN+AI+RPSIVGA+W+EPF
Sbjct: 181 LEWLDDAIIDEITPKLIRDWPNIYTYTKALGEMVVQQESRNLNIAIIRPSIVGATWQEPF 240

Query: 241 PGWIDNFNGPSGLFIAAGKGILRTIRASNNALADLVPVDVVVNMSLAAAWYSGVNRPRNI 300
           PGW+DN NGP+G+ IA GKG LR I+A+  A+AD++PVD VVN+ LA  WY+ V+RP++ 
Sbjct: 241 PGWVDNINGPNGIIIATGKGFLRAIKATPMAVADVIPVDTVVNLMLAVGWYTAVHRPKST 300

Query: 301 MVYNCTTGSTNPFHWGEVEYHVISTFKRNPLEQAFRRPNVNLTSNHLLYHYWIAVSHKAP 360
           +VY+ T+G+ NP +W ++   V++TF++ P E+ FRRPN N TSN     YW AVSH+AP
Sbjct: 301 LVYHITSGNMNPCNWHKMGVQVLATFEKIPFERPFRRPNANFTSNSFTSQYWNAVSHRAP 360

Query: 361 AFLYDIYLRMTGRSPRMMKTITRLHKAMVFLEYFTSNSWVWNTENVNMLMNQLNPEDKKT 420
           A +YD YLR+TGR PRM K + RL + +  LEYF + SW W+T N  MLM++L+PED++ 
Sbjct: 361 AIIYDCYLRLTGRKPRMTKLMNRLLRTVSMLEYFINRSWEWSTYNTEMLMSELSPEDQRV 420

Query: 421 FNIDVRQLHWAEYIENYCLGTKKYVLNEEMSGLPAARKHLNKLRNIRYGFNTILVILIWR 480
           FN DVRQL+W EYIENY LG KKY+L E+M+G+P A++ L +LRNI Y FNT L ++ WR
Sbjct: 421 FNFDVRQLNWLEYIENYVLGVKKYLLKEDMAGIPKAKQRLKRLRNIHYLFNTALFLIAWR 480

Query: 481 IFIARSQMARNIWYFVVSLCYKFLSYFRASSTMR 514
           + IARSQMARN+W+F+VS CYKFLSYFRASST++
Sbjct: 481 LLIARSQMARNVWFFIVSFCYKFLSYFRASSTLK 514


>gi|239747878 PREDICTED: hypothetical protein isoform 2 [Homo
           sapiens]
          Length = 148

 Score = 90.9 bits (224), Expect = 3e-18
 Identities = 44/111 (39%), Positives = 72/111 (64%), Gaps = 5/111 (4%)

Query: 271 ALADLVPV--DVVVNMSLAAAWYSGVNR--PRNIMVYNCTTGSTNPFHWGEVEYHVISTF 326
           A+ DL+P+  D  VN+ LA  W    +   P++++VY+CT+G+ NP + G++ + V++TF
Sbjct: 2   AVGDLIPIPGDTAVNLPLAVGWCVCCSSQVPKSVLVYHCTSGNLNPCNRGKMGFQVLATF 61

Query: 327 KRN-PLEQAFRRPNVNLTSNHLLYHYWIAVSHKAPAFLYDIYLRMTGRSPR 376
           +   P E+A  RP  + T+++    YW A+S +APA +YD YL +TGR PR
Sbjct: 62  EIPIPFERALTRPYADFTTSNFRTQYWNAISQQAPAIIYDFYLWLTGRKPR 112


>gi|239747880 PREDICTED: hypothetical protein isoform 1 [Homo
           sapiens]
          Length = 113

 Score = 86.7 bits (213), Expect = 5e-17
 Identities = 39/95 (41%), Positives = 64/95 (67%), Gaps = 2/95 (2%)

Query: 289 AWYSGV-NRPRNIMVYNCTTGSTNPFHWGEVEYHVISTFKRN-PLEQAFRRPNVNLTSNH 346
           +WY G  NRP++++VY+CT+G+ NP + G++ + V++TF+   P E+A  RP  + T+++
Sbjct: 6   SWYKGKKNRPKSVLVYHCTSGNLNPCNRGKMGFQVLATFEIPIPFERALTRPYADFTTSN 65

Query: 347 LLYHYWIAVSHKAPAFLYDIYLRMTGRSPRMMKTI 381
               YW A+S +APA +YD YL +TGR P   + I
Sbjct: 66  FRTQYWNAISQQAPAIIYDFYLWLTGRKPSYRRKI 100


>gi|214830928 coiled-coil domain containing 113 isoform 2 [Homo
           sapiens]
          Length = 323

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 19/40 (47%), Positives = 23/40 (57%)

Query: 53  QERVEEVLSGKLFDRLRDENPDFREKIIAINSELTQPKLA 92
           +E V E L    F +L+ EN  F E I A N ELTQ KL+
Sbjct: 156 KEEVSEALHDVDFQQLKIENAQFLETIEARNQELTQLKLS 195


>gi|19923432 coiled-coil domain containing 113 isoform 1 [Homo
           sapiens]
          Length = 377

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 19/40 (47%), Positives = 23/40 (57%)

Query: 53  QERVEEVLSGKLFDRLRDENPDFREKIIAINSELTQPKLA 92
           +E V E L    F +L+ EN  F E I A N ELTQ KL+
Sbjct: 210 KEEVSEALHDVDFQQLKIENAQFLETIEARNQELTQLKLS 249


>gi|205360941 uridine phosphorylase 2 isoform b [Homo sapiens]
          Length = 374

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 33/128 (25%), Positives = 48/128 (37%), Gaps = 15/128 (11%)

Query: 277 PVDVVVNMSLAAAWYSGVNRPRNIMVYNCTTGSTNPFHWGEVEYHVISTFKRNPLEQA-- 334
           P DV  + S +    S +  P +    +CT   T  FH  E    VI    R+       
Sbjct: 19  PEDVPASPSTSTMIVSVLRPPSHA---SCTACGTVTFHIVERMASVIPASNRSMRSDRNT 75

Query: 335 --------FRRPNVNLTSNHLLYHYWIAV-SHKAPAFLYDIYLRMTGRSPRMMKTITR-L 384
                    + P ++L    +LYH  +   +H  PA   D+     G SP  MK     +
Sbjct: 76  YVGKRFVHVKNPYLDLMDEDILYHLDLGTKTHNLPAMFGDVKFVCVGGSPNRMKAFALFM 135

Query: 385 HKAMVFLE 392
           HK + F E
Sbjct: 136 HKELGFEE 143


>gi|140560917 myomesin 1 isoform b [Homo sapiens]
          Length = 1589

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 6/63 (9%)

Query: 397 NSWV---WNTENVNMLMNQLNPEDKKTFNIDVRQLHWAEYIENYCLGTKKYVLNEEMSGL 453
           + WV   W+ E   +  + LN ED+  + I VR     EY E Y         + E+ G 
Sbjct: 453 SKWVQTLWSGERATLTFSHLNKEDEGLYTIRVRM---GEYYEQYSAYVFVRDADAEIEGA 509

Query: 454 PAA 456
           PAA
Sbjct: 510 PAA 512


>gi|140560919 myomesin 1 isoform a [Homo sapiens]
          Length = 1685

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 6/63 (9%)

Query: 397 NSWV---WNTENVNMLMNQLNPEDKKTFNIDVRQLHWAEYIENYCLGTKKYVLNEEMSGL 453
           + WV   W+ E   +  + LN ED+  + I VR     EY E Y         + E+ G 
Sbjct: 453 SKWVQTLWSGERATLTFSHLNKEDEGLYTIRVRM---GEYYEQYSAYVFVRDADAEIEGA 509

Query: 454 PAA 456
           PAA
Sbjct: 510 PAA 512


>gi|34577114 cytomatrix protein p110 [Homo sapiens]
          Length = 957

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 16/50 (32%), Positives = 31/50 (62%), Gaps = 6/50 (12%)

Query: 44  VRQKAGQTPQERVEEVLSGKLFDRLRDENPDFREKIIAINSELTQPKLAL 93
           ++++  +  +ER+EE+ S       R EN D +EK+ A+ +ELT+ + +L
Sbjct: 600 LKEQRERDDRERLEEIES------FRKENKDLKEKVNALQAELTEKESSL 643


>gi|62953129 macrophage erythroblast attacher isoform 2 [Homo
           sapiens]
          Length = 355

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 41/177 (23%), Positives = 71/177 (40%), Gaps = 28/177 (15%)

Query: 27  LEKLLRSCPKVNSVYVL---VRQKAGQTPQERVEEVLSGKLFDRLRDENPDFREKIIAIN 83
           LEK L  CP V+SV  L   V +K     ++ VE +       +  DE+    ++ I   
Sbjct: 54  LEKTLSGCPAVDSVVSLLDGVVEKLSVLKRKAVESI-------QAEDESAKLCKRRIEHL 106

Query: 84  SELTQPKLALSEEDKEVIIDSTNIIFHCAATVRFNENLRDAVQLNV-------IATRQLI 136
            E +  + A +   K   +D   ++ H      +N  ++ A Q  +       +  ++ I
Sbjct: 107 KEHSSDQPAAASVWKRKRMDRM-MVEHLLRCGYYNTAVKLARQSGIESCLEFSLRIQEFI 165

Query: 137 LLAQQMKNLEVFMHVSTAYAYCNRKHIDEV-------VYPPP--VDP-KKLIDSLEW 183
            L +Q K L+   H    ++      +DEV        +PP   + P K L+D   W
Sbjct: 166 ELIRQNKRLDAVRHARKHFSQAEGSQLDEVRQAMGMLAFPPDTHISPYKDLLDPARW 222


>gi|27597096 uridine phosphorylase 2 isoform a [Homo sapiens]
          Length = 317

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 2/59 (3%)

Query: 336 RRPNVNLTSNHLLYHYWIAV-SHKAPAFLYDIYLRMTGRSPRMMKTITR-LHKAMVFLE 392
           + P ++L    +LYH  +   +H  PA   D+     G SP  MK     +HK + F E
Sbjct: 28  KNPYLDLMDEDILYHLDLGTKTHNLPAMFGDVKFVCVGGSPNRMKAFALFMHKELGFEE 86


>gi|4504507 3 beta-hydroxysteroid dehydrogenase 1 [Homo sapiens]
          Length = 373

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 37/145 (25%), Positives = 69/145 (47%), Gaps = 23/145 (15%)

Query: 10  GKNVLLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEVLSGKLFDRLR 69
           G + L+TGA GFLG+ ++  L++   ++  + VL +    +  +E          F +L+
Sbjct: 3   GWSCLVTGAGGFLGQRIIRLLVKE-KELKEIRVLDKAFGPELREE----------FSKLQ 51

Query: 70  DENPDFREKIIAINSE-LTQPKLALSEEDKEVIIDSTNIIFHCAATVRFNENLRDAVQLN 128
           +     + K+  +  + L +P L  + +D  VII +  II     T R        + +N
Sbjct: 52  N-----KTKLTVLEGDILDEPFLKRACQDVSVIIHTACIIDVFGVTHR-----ESIMNVN 101

Query: 129 VIATRQLILLAQQMKNLEVFMHVST 153
           V  T QL+L A    ++ VF++ S+
Sbjct: 102 VKGT-QLLLEACVQASVPVFIYTSS 125


>gi|4507173 spastic paraplegia 7 isoform 1 [Homo sapiens]
          Length = 795

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 13/49 (26%), Positives = 23/49 (46%)

Query: 137 LLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPPPVDPKKLIDSLEWMD 185
           +L   +  L+   +        N + I+ ++ PPP  PKK+I    W+D
Sbjct: 717 VLQDNLDKLQALANALLEKEVINYEDIEALIGPPPHGPKKMIAPQRWID 765


>gi|34878777 ring finger protein 20 [Homo sapiens]
          Length = 975

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 29/131 (22%), Positives = 64/131 (48%), Gaps = 11/131 (8%)

Query: 26  LLEKLLRSCPKV--NSVYVLVRQKAGQTPQERVEEVLSGKLFDRLRDENP-----DFREK 78
           LL  + RS PK   + V ++  +K  +   E + + L   L D+ + EN      D   K
Sbjct: 645 LLLDMYRSAPKEQRDKVQLMAAEKKSKAELEDLRQRLKD-LEDKEKKENKKMADEDALRK 703

Query: 79  IIAINSELT--QPKLALSEEDKEVIIDSTNIIFHCAATVRFNENLRDAVQLNVIATRQLI 136
           I A+  ++   Q KLA++++++E ++   ++       ++  +N+R   QL         
Sbjct: 704 IRAVEEQIEYLQKKLAMAKQEEEALLSEMDVTGQAFEDMQ-EQNIRLMQQLREKDDANFK 762

Query: 137 LLAQQMKNLEV 147
           L+++++K+ ++
Sbjct: 763 LMSERIKSNQI 773


>gi|20806097 nucleolar complex associated 3 homolog [Homo sapiens]
          Length = 800

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 26/141 (18%), Positives = 64/141 (45%), Gaps = 16/141 (11%)

Query: 27  LEKLLRSCPKVNSVYVL-VRQKAGQTPQERVEEVLSGKLFDRLRDENPDFREKII----- 80
           + + L++ P+   +++L ++ K+G  PQ R + V      +  ++E  +  E+II     
Sbjct: 137 IPRTLQTAPEKELIHLLPIKDKSGIIPQTREKPVTDSNKDEEDQEEERELEEEIIEDPIQ 196

Query: 81  --AINSELTQPKLALSEEDKEVIIDSTNIIFHCAATVRFNENLRDAVQLN----VIATRQ 134
              I   L + K  L E+   +   ++ I+      ++  + LR  +        +  R+
Sbjct: 197 ELTIEEHLIERKKKLQEKKMHIAALASAILSDPENNIKKLKELRSMLMEQDPDVAVTVRK 256

Query: 135 LILLAQQMKNLEVFMHVSTAY 155
           L++++     +E+F  ++ +Y
Sbjct: 257 LVIVSL----MELFKDITPSY 273


>gi|109255234 centrosomal protein 290kDa [Homo sapiens]
          Length = 2479

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 3/72 (4%)

Query: 63  KLFDRLRDENPDFREKIIAINSELTQPKLALSEEDKEVIIDSTNIIFHCAATVRFNENLR 122
           +L D L+ +N +    ++A+N+++ + KL LS +D E+I      + H       N  L 
Sbjct: 287 ELTDLLKSKNEEDDPIMVAVNAKVEEWKLILSSKDDEII--EYQQMLHNLREKLKNAQL- 343

Query: 123 DAVQLNVIATRQ 134
           DA + NV+A +Q
Sbjct: 344 DADKSNVMALQQ 355


>gi|40807469 TRAF interacting protein [Homo sapiens]
          Length = 469

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 15/40 (37%), Positives = 23/40 (57%)

Query: 61  SGKLFDRLRDENPDFREKIIAINSELTQPKLALSEEDKEV 100
           SG++ D+LR +    R K+  + SEL Q KL L    K++
Sbjct: 218 SGEVADKLRKDLFSSRSKLQTVYSELDQAKLELKSAQKDL 257


>gi|19111150 angiomotin isoform 2 [Homo sapiens]
          Length = 675

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 19/78 (24%), Positives = 40/78 (51%), Gaps = 5/78 (6%)

Query: 27  LEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEVLSGKL---FDRLRDENPDFREKIIAIN 83
           L+K+     +V+  Y  + + + +  +E +E+ +  KL     R+ D N D RE++   N
Sbjct: 53  LQKVETEIQRVSEAYENLVKSSSK--REALEKAMRNKLEGEIRRMHDFNRDLRERLETAN 110

Query: 84  SELTQPKLALSEEDKEVI 101
            +L + +   SE+ ++ I
Sbjct: 111 KQLAEKEYEGSEDTRKTI 128


>gi|166064029 angiomotin isoform 1 [Homo sapiens]
          Length = 1084

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 19/78 (24%), Positives = 40/78 (51%), Gaps = 5/78 (6%)

Query: 27  LEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEVLSGKL---FDRLRDENPDFREKIIAIN 83
           L+K+     +V+  Y  + + + +  +E +E+ +  KL     R+ D N D RE++   N
Sbjct: 462 LQKVETEIQRVSEAYENLVKSSSK--REALEKAMRNKLEGEIRRMHDFNRDLRERLETAN 519

Query: 84  SELTQPKLALSEEDKEVI 101
            +L + +   SE+ ++ I
Sbjct: 520 KQLAEKEYEGSEDTRKTI 537


>gi|189181750 human immunodeficiency virus type I enhancer binding
           protein 3 b [Homo sapiens]
          Length = 2405

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 4/62 (6%)

Query: 77  EKIIAINSELTQPKLALSEEDKEVI----IDSTNIIFHCAATVRFNENLRDAVQLNVIAT 132
           ++   + +  TQP L LS EDK  +    +  T +I H    +  NE + D  +++ +  
Sbjct: 427 QRTAMLTATSTQPLLPLSTEDKPSLVPLSVPRTQVIEHITKLITINEAVVDTSEIDSVKP 486

Query: 133 RQ 134
           R+
Sbjct: 487 RR 488


>gi|116089331 human immunodeficiency virus type I enhancer binding
           protein 3 [Homo sapiens]
          Length = 2406

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 4/62 (6%)

Query: 77  EKIIAINSELTQPKLALSEEDKEVI----IDSTNIIFHCAATVRFNENLRDAVQLNVIAT 132
           ++   + +  TQP L LS EDK  +    +  T +I H    +  NE + D  +++ +  
Sbjct: 427 QRTAMLTATSTQPLLPLSTEDKPSLVPLSVPRTQVIEHITKLITINEAVVDTSEIDSVKP 486

Query: 133 RQ 134
           R+
Sbjct: 487 RR 488


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.136    0.416 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,823,176
Number of Sequences: 37866
Number of extensions: 809662
Number of successful extensions: 1772
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1761
Number of HSP's gapped (non-prelim): 23
length of query: 515
length of database: 18,247,518
effective HSP length: 107
effective length of query: 408
effective length of database: 14,195,856
effective search space: 5791909248
effective search space used: 5791909248
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.