Guide to the Human Genome
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Name: FAR1 Sequence: fasta or formatted (515aa) NCBI GI: 24308324
Description:

fatty acyl CoA reductase 1

Referenced in:

Lipid Metabolism
Peroxisomes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         35           3
 C cysteine            1.2          6           1
 D aspartate           3.7         19           2
 E glutamate           5.6         29           2
 F phenylalanine       4.1         21           1
 G glycine             4.3         22           1
 H histidine           2.1         11           1
 I isoleucine          6.8         35           2
 K lysine              5.6         29           2
 L leucine             9.9         51           2
 M methionine          2.9         15           2
 N asparagine          7.6         39           2
 P proline             4.7         24           3
 Q glutamine           2.7         14           2
 R arginine            6.2         32           2
 S serine              5.4         28           2
 T threonine           5.0         26           2
 V valine              8.3         43           3
 W tryptophan          2.1         11           1
 Y tyrosine            4.9         25           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   fatty acyl CoA reductase 1 
FAR2                  0.625   fatty acyl CoA reductase 2 
LOC100294348          0.065   PREDICTED: hypothetical protein isoform 2 
LOC100294348          0.061   PREDICTED: hypothetical protein isoform 1 
CCDC113               0.008   coiled-coil domain containing 113 isoform 2 
CCDC113               0.008   coiled-coil domain containing 113 isoform 1 
UPP2                  0.007   uridine phosphorylase 2 isoform b 
MYOM1                 0.007   myomesin 1 isoform b 
MYOM1                 0.007   myomesin 1 isoform a 
ERC2                  0.006   cytomatrix protein p110 
MAEA                  0.006   macrophage erythroblast attacher isoform 2 
UPP2                  0.005   uridine phosphorylase 2 isoform a 
HSD3B1                0.005   3 beta-hydroxysteroid dehydrogenase 1 
SPG7                  0.005   spastic paraplegia 7 isoform 1 
RNF20                 0.005   ring finger protein 20 
NOC3L                 0.005   nucleolar complex associated 3 homolog 
CEP290                0.004   centrosomal protein 290kDa 
TRAIP                 0.004   TRAF interacting protein 
AMOT                  0.004   angiomotin isoform 2 
AMOT                  0.004   angiomotin isoform 1 
HIVEP3                0.004   human immunodeficiency virus type I enhancer bindin...
HIVEP3                0.004   human immunodeficiency virus type I enhancer bindin...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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