Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 24119277

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|24119277 alanine-glyoxylate aminotransferase 2-like 2 [Homo
sapiens]
         (450 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|24119277 alanine-glyoxylate aminotransferase 2-like 2 [Homo s...   909   0.0  
gi|37574042 alanine-glyoxylate aminotransferase 2-like 1 isoform...   613   e-176
gi|226442705 alanine-glyoxylate aminotransferase 2-like 1 isofor...   591   e-169
gi|226442709 alanine-glyoxylate aminotransferase 2-like 1 isofor...   540   e-153
gi|13994255 alanine-glyoxylate aminotransferase 2 precursor [Hom...   249   3e-66
gi|4557809 ornithine aminotransferase precursor [Homo sapiens]        129   7e-30
gi|188536080 4-aminobutyrate aminotransferase precursor [Homo sa...    80   5e-15
gi|38679950 4-aminobutyrate aminotransferase precursor [Homo sap...    80   5e-15
gi|38679946 4-aminobutyrate aminotransferase precursor [Homo sap...    80   5e-15
gi|169163827 PREDICTED: similar to UPF0634 protein KIAA1641 [Hom...    32   1.2  
gi|239741684 PREDICTED: ankyrin repeat domain 36 [Homo sapiens]        32   1.2  
gi|169161027 PREDICTED: hypothetical protein [Homo sapiens]            31   2.0  
gi|4506903 splicing factor, arginine/serine-rich 9 [Homo sapiens]      30   4.5  
gi|113411962 PREDICTED: hypothetical protein [Homo sapiens]            30   5.8  
gi|113403778 PREDICTED: hypothetical protein [Homo sapiens]            30   5.8  
gi|118582269 splicing factor, arginine/serine-rich 1 isoform 2 [...    30   5.8  
gi|5902076 splicing factor, arginine/serine-rich 1 isoform 1 [Ho...    30   5.8  
gi|124517695 ankyrin repeat domain 36B [Homo sapiens]                  29   9.9  

>gi|24119277 alanine-glyoxylate aminotransferase 2-like 2 [Homo
           sapiens]
          Length = 450

 Score =  909 bits (2348), Expect = 0.0
 Identities = 450/450 (100%), Positives = 450/450 (100%)

Query: 1   MAADQRPKADTLALRQRLISSSCRLFFPEDPVKIVRAQGQYMYDEQGAEYIDCISNVAHV 60
           MAADQRPKADTLALRQRLISSSCRLFFPEDPVKIVRAQGQYMYDEQGAEYIDCISNVAHV
Sbjct: 1   MAADQRPKADTLALRQRLISSSCRLFFPEDPVKIVRAQGQYMYDEQGAEYIDCISNVAHV 60

Query: 61  GHCHPLVVQAAHEQNQVLNTNSRYLHDNIVDYAQRLSETLPEQLCVFYFLNSGSEANDLA 120
           GHCHPLVVQAAHEQNQVLNTNSRYLHDNIVDYAQRLSETLPEQLCVFYFLNSGSEANDLA
Sbjct: 61  GHCHPLVVQAAHEQNQVLNTNSRYLHDNIVDYAQRLSETLPEQLCVFYFLNSGSEANDLA 120

Query: 121 LRLARHYTGHQDVVVLDHAYHGHLSSLIDISPYKFRNLDGQKEWVHVAPLPDTYRGPYRE 180
           LRLARHYTGHQDVVVLDHAYHGHLSSLIDISPYKFRNLDGQKEWVHVAPLPDTYRGPYRE
Sbjct: 121 LRLARHYTGHQDVVVLDHAYHGHLSSLIDISPYKFRNLDGQKEWVHVAPLPDTYRGPYRE 180

Query: 181 DHPNPAMAYANEVKRVVSSAQEKGRKIAAFFAESLPSVGGQIIPPAGYFSQVAEHIRKAG 240
           DHPNPAMAYANEVKRVVSSAQEKGRKIAAFFAESLPSVGGQIIPPAGYFSQVAEHIRKAG
Sbjct: 181 DHPNPAMAYANEVKRVVSSAQEKGRKIAAFFAESLPSVGGQIIPPAGYFSQVAEHIRKAG 240

Query: 241 GVFVADEIQVGFGRVGKHFWAFQLQGKDFVPDIVTMGKSIGNGHPVACVAATQPVARAFE 300
           GVFVADEIQVGFGRVGKHFWAFQLQGKDFVPDIVTMGKSIGNGHPVACVAATQPVARAFE
Sbjct: 241 GVFVADEIQVGFGRVGKHFWAFQLQGKDFVPDIVTMGKSIGNGHPVACVAATQPVARAFE 300

Query: 301 ATGVEYFNTFGGSPVSCAVGLAVLNVLEKEQLQDHATSVGSFLMQLLGQQKIKHPIVGDV 360
           ATGVEYFNTFGGSPVSCAVGLAVLNVLEKEQLQDHATSVGSFLMQLLGQQKIKHPIVGDV
Sbjct: 301 ATGVEYFNTFGGSPVSCAVGLAVLNVLEKEQLQDHATSVGSFLMQLLGQQKIKHPIVGDV 360

Query: 361 RGVGLFIGVDLIKDEATRTPATEEAAYLVSRLKENYVLLSTDGPGRNILKFKPPMCFSLD 420
           RGVGLFIGVDLIKDEATRTPATEEAAYLVSRLKENYVLLSTDGPGRNILKFKPPMCFSLD
Sbjct: 361 RGVGLFIGVDLIKDEATRTPATEEAAYLVSRLKENYVLLSTDGPGRNILKFKPPMCFSLD 420

Query: 421 NARQVVAKLDAILTDMEEKVRSCETLRLQP 450
           NARQVVAKLDAILTDMEEKVRSCETLRLQP
Sbjct: 421 NARQVVAKLDAILTDMEEKVRSCETLRLQP 450


>gi|37574042 alanine-glyoxylate aminotransferase 2-like 1 isoform 1
           [Homo sapiens]
          Length = 499

 Score =  613 bits (1581), Expect = e-176
 Identities = 288/432 (66%), Positives = 360/432 (83%), Gaps = 1/432 (0%)

Query: 8   KADTLALRQRLISSSCRLFFPEDPVKIVRAQGQYMYDEQGAEYIDCISNVAHVGHCHPLV 67
           K DTL LR++ I  SC++FF  DP+KIVRAQ QYM+DE G +Y+DCI+NVAHVGHCHP V
Sbjct: 7   KRDTLGLRKKHIGPSCKVFFASDPIKIVRAQRQYMFDENGEQYLDCINNVAHVGHCHPGV 66

Query: 68  VQAAHEQNQVLNTNSRYLHDNIVDYAQRLSETLPEQLCVFYFLNSGSEANDLALRLARHY 127
           V+AA +Q ++LNTNSR+LHDNIV+YA+RLS TLPE+L V YF NSGSEANDLALRLAR +
Sbjct: 67  VKAALKQMELLNTNSRFLHDNIVEYAKRLSATLPEKLSVCYFTNSGSEANDLALRLARQF 126

Query: 128 TGHQDVVVLDHAYHGHLSSLIDISPYKF-RNLDGQKEWVHVAPLPDTYRGPYREDHPNPA 186
            GHQDV+ LDHAYHGHLSSLI+ISPYKF +  D +KE+VHVAP PDTYRG YREDH + A
Sbjct: 127 RGHQDVITLDHAYHGHLSSLIEISPYKFQKGKDVKKEFVHVAPTPDTYRGKYREDHADSA 186

Query: 187 MAYANEVKRVVSSAQEKGRKIAAFFAESLPSVGGQIIPPAGYFSQVAEHIRKAGGVFVAD 246
            AYA+EVK+++  A   GRKIAAF AES+ S GGQIIPPAGYF +VAE++  AGGVF+AD
Sbjct: 187 SAYADEVKKIIEDAHNSGRKIAAFIAESMQSCGGQIIPPAGYFQKVAEYVHGAGGVFIAD 246

Query: 247 EIQVGFGRVGKHFWAFQLQGKDFVPDIVTMGKSIGNGHPVACVAATQPVARAFEATGVEY 306
           E+QVGFGRVGKHFW+FQ+ G+DFVPDIVTMGK +GNGHPVACV  T+ +A AF ++G+EY
Sbjct: 247 EVQVGFGRVGKHFWSFQMYGEDFVPDIVTMGKPMGNGHPVACVVTTKEIAEAFSSSGMEY 306

Query: 307 FNTFGGSPVSCAVGLAVLNVLEKEQLQDHATSVGSFLMQLLGQQKIKHPIVGDVRGVGLF 366
           FNT+GG+PVSCAVGLAVL+++E E LQ +A  VG++L +LL +QK KH ++GD+RG+GLF
Sbjct: 307 FNTYGGNPVSCAVGLAVLDIIENEDLQGNAKRVGNYLTELLKKQKAKHTLIGDIRGIGLF 366

Query: 367 IGVDLIKDEATRTPATEEAAYLVSRLKENYVLLSTDGPGRNILKFKPPMCFSLDNARQVV 426
           IG+DL+KD   RTPAT EA +++ ++KE  VLLS DGP RN+LK KPPMCF+ ++A+ +V
Sbjct: 367 IGIDLVKDHLKRTPATAEAQHIIYKMKEKRVLLSADGPHRNVLKIKPPMCFTEEDAKFMV 426

Query: 427 AKLDAILTDMEE 438
            +LD ILT +EE
Sbjct: 427 DQLDRILTVLEE 438


>gi|226442705 alanine-glyoxylate aminotransferase 2-like 1 isoform 2
           [Homo sapiens]
          Length = 493

 Score =  591 bits (1523), Expect = e-169
 Identities = 282/432 (65%), Positives = 354/432 (81%), Gaps = 7/432 (1%)

Query: 8   KADTLALRQRLISSSCRLFFPEDPVKIVRAQGQYMYDEQGAEYIDCISNVAHVGHCHPLV 67
           K DTL LR++ I  SC++FF  DP+KIVRAQ QYM+DE G +Y+DCI+NVAH       V
Sbjct: 7   KRDTLGLRKKHIGPSCKVFFASDPIKIVRAQRQYMFDENGEQYLDCINNVAHG------V 60

Query: 68  VQAAHEQNQVLNTNSRYLHDNIVDYAQRLSETLPEQLCVFYFLNSGSEANDLALRLARHY 127
           V+AA +Q ++LNTNSR+LHDNIV+YA+RLS TLPE+L V YF NSGSEANDLALRLAR +
Sbjct: 61  VKAALKQMELLNTNSRFLHDNIVEYAKRLSATLPEKLSVCYFTNSGSEANDLALRLARQF 120

Query: 128 TGHQDVVVLDHAYHGHLSSLIDISPYKF-RNLDGQKEWVHVAPLPDTYRGPYREDHPNPA 186
            GHQDV+ LDHAYHGHLSSLI+ISPYKF +  D +KE+VHVAP PDTYRG YREDH + A
Sbjct: 121 RGHQDVITLDHAYHGHLSSLIEISPYKFQKGKDVKKEFVHVAPTPDTYRGKYREDHADSA 180

Query: 187 MAYANEVKRVVSSAQEKGRKIAAFFAESLPSVGGQIIPPAGYFSQVAEHIRKAGGVFVAD 246
            AYA+EVK+++  A   GRKIAAF AES+ S GGQIIPPAGYF +VAE++  AGGVF+AD
Sbjct: 181 SAYADEVKKIIEDAHNSGRKIAAFIAESMQSCGGQIIPPAGYFQKVAEYVHGAGGVFIAD 240

Query: 247 EIQVGFGRVGKHFWAFQLQGKDFVPDIVTMGKSIGNGHPVACVAATQPVARAFEATGVEY 306
           E+QVGFGRVGKHFW+FQ+ G+DFVPDIVTMGK +GNGHPVACV  T+ +A AF ++G+EY
Sbjct: 241 EVQVGFGRVGKHFWSFQMYGEDFVPDIVTMGKPMGNGHPVACVVTTKEIAEAFSSSGMEY 300

Query: 307 FNTFGGSPVSCAVGLAVLNVLEKEQLQDHATSVGSFLMQLLGQQKIKHPIVGDVRGVGLF 366
           FNT+GG+PVSCAVGLAVL+++E E LQ +A  VG++L +LL +QK KH ++GD+RG+GLF
Sbjct: 301 FNTYGGNPVSCAVGLAVLDIIENEDLQGNAKRVGNYLTELLKKQKAKHTLIGDIRGIGLF 360

Query: 367 IGVDLIKDEATRTPATEEAAYLVSRLKENYVLLSTDGPGRNILKFKPPMCFSLDNARQVV 426
           IG+DL+KD   RTPAT EA +++ ++KE  VLLS DGP RN+LK KPPMCF+ ++A+ +V
Sbjct: 361 IGIDLVKDHLKRTPATAEAQHIIYKMKEKRVLLSADGPHRNVLKIKPPMCFTEEDAKFMV 420

Query: 427 AKLDAILTDMEE 438
            +LD ILT +EE
Sbjct: 421 DQLDRILTVLEE 432


>gi|226442709 alanine-glyoxylate aminotransferase 2-like 1 isoform 3
           [Homo sapiens]
          Length = 441

 Score =  540 bits (1390), Expect = e-153
 Identities = 254/380 (66%), Positives = 318/380 (83%), Gaps = 1/380 (0%)

Query: 60  VGHCHPLVVQAAHEQNQVLNTNSRYLHDNIVDYAQRLSETLPEQLCVFYFLNSGSEANDL 119
           +GHCHP VV+AA +Q ++LNTNSR+LHDNIV+YA+RLS TLPE+L V YF NSGSEANDL
Sbjct: 1   MGHCHPGVVKAALKQMELLNTNSRFLHDNIVEYAKRLSATLPEKLSVCYFTNSGSEANDL 60

Query: 120 ALRLARHYTGHQDVVVLDHAYHGHLSSLIDISPYKF-RNLDGQKEWVHVAPLPDTYRGPY 178
           ALRLAR + GHQDV+ LDHAYHGHLSSLI+ISPYKF +  D +KE+VHVAP PDTYRG Y
Sbjct: 61  ALRLARQFRGHQDVITLDHAYHGHLSSLIEISPYKFQKGKDVKKEFVHVAPTPDTYRGKY 120

Query: 179 REDHPNPAMAYANEVKRVVSSAQEKGRKIAAFFAESLPSVGGQIIPPAGYFSQVAEHIRK 238
           REDH + A AYA+EVK+++  A   GRKIAAF AES+ S GGQIIPPAGYF +VAE++  
Sbjct: 121 REDHADSASAYADEVKKIIEDAHNSGRKIAAFIAESMQSCGGQIIPPAGYFQKVAEYVHG 180

Query: 239 AGGVFVADEIQVGFGRVGKHFWAFQLQGKDFVPDIVTMGKSIGNGHPVACVAATQPVARA 298
           AGGVF+ADE+QVGFGRVGKHFW+FQ+ G+DFVPDIVTMGK +GNGHPVACV  T+ +A A
Sbjct: 181 AGGVFIADEVQVGFGRVGKHFWSFQMYGEDFVPDIVTMGKPMGNGHPVACVVTTKEIAEA 240

Query: 299 FEATGVEYFNTFGGSPVSCAVGLAVLNVLEKEQLQDHATSVGSFLMQLLGQQKIKHPIVG 358
           F ++G+EYFNT+GG+PVSCAVGLAVL+++E E LQ +A  VG++L +LL +QK KH ++G
Sbjct: 241 FSSSGMEYFNTYGGNPVSCAVGLAVLDIIENEDLQGNAKRVGNYLTELLKKQKAKHTLIG 300

Query: 359 DVRGVGLFIGVDLIKDEATRTPATEEAAYLVSRLKENYVLLSTDGPGRNILKFKPPMCFS 418
           D+RG+GLFIG+DL+KD   RTPAT EA +++ ++KE  VLLS DGP RN+LK KPPMCF+
Sbjct: 301 DIRGIGLFIGIDLVKDHLKRTPATAEAQHIIYKMKEKRVLLSADGPHRNVLKIKPPMCFT 360

Query: 419 LDNARQVVAKLDAILTDMEE 438
            ++A+ +V +LD ILT +EE
Sbjct: 361 EEDAKFMVDQLDRILTVLEE 380


>gi|13994255 alanine-glyoxylate aminotransferase 2 precursor [Homo
           sapiens]
          Length = 514

 Score =  249 bits (637), Expect = 3e-66
 Identities = 147/436 (33%), Positives = 238/436 (54%), Gaps = 32/436 (7%)

Query: 29  EDPVKIVRAQGQYMYDEQGAEYIDCISNVA--HVGHCHPLVVQAAHEQ-NQVLNTNSRYL 85
           + P+ + +   ++++D +G+ Y+D  S +    VGHCHP V   A +Q  ++ +T++ + 
Sbjct: 83  QKPLLLHQGHMEWLFDAEGSRYLDFFSGIVTVSVGHCHPKVNAVAQKQLGRLWHTSTVFF 142

Query: 86  HDNIVDYAQRLSETLPEQLCVFYFLNSGSEANDLALRLARHYTGHQDVVVLDHAYHG--- 142
           H  + +YA++L+  LPE L V + +NSGSEAN+LA+ +AR ++ + D++    AYHG   
Sbjct: 143 HPPMHEYAEKLAALLPEPLKVIFLVNSGSEANELAMLMARAHSNNIDIISFRGAYHGCSP 202

Query: 143 HLSSLIDISPYKFRNLDGQKEWVHVAPLPDTYRGPYREDH---------------PNPAM 187
           +   L ++  YK     G          PD +RGP+   H               P+   
Sbjct: 203 YTLGLTNVGTYKMELPGGTG--CQPTMCPDVFRGPWGGSHCRDSPVQTIRKCSCAPDCCQ 260

Query: 188 A---YANEVKRVVSSAQEKGRKIAAFFAESLPSVGGQIIPPAGYFSQVAEHIRKAGGVFV 244
           A   Y  + K  +S++  K   IA FFAE +  V G +  P G+  +  E +R  GGV +
Sbjct: 261 AKDQYIEQFKDTLSTSVAKS--IAGFFAEPIQGVNGVVQYPKGFLKEAFELVRARGGVCI 318

Query: 245 ADEIQVGFGRVGKHFWAFQLQGKDFVPDIVTMGKSIGNGHPVACVAATQPVARAFEATGV 304
           ADE+Q GFGR+G HFW FQ    D +PDIVTM K IGNG P+A V  T  +A++  A  +
Sbjct: 319 ADEVQTGFGRLGSHFWGFQTH--DVLPDIVTMAKGIGNGFPMAAVITTPEIAKSL-AKCL 375

Query: 305 EYFNTFGGSPVSCAVGLAVLNVLEKEQLQDHATSVGSFLMQLLGQQKIKHPIVGDVRGVG 364
           ++FNTFGG+P++CA+G AVL V+++E LQ+++  VG++++    + + +  IVGDVRG G
Sbjct: 376 QHFNTFGGNPMACAIGSAVLEVIKEENLQENSQEVGTYMLLKFAKLRDEFEIVGDVRGKG 435

Query: 365 LFIGVDLIKDEATRTP-ATEEAAYLVSRLKENYVLLSTDGPGRNILKFKPPMCFSLDNAR 423
           L IG+++++D+ +  P   EE   +    K   +L+          +  P MC +     
Sbjct: 436 LMIGIEMVQDKISCRPLPREEVNQIHEDCKHMGLLVGRGSIFSQTFRIAPSMCITKPEVD 495

Query: 424 QVVAKLDAILTDMEEK 439
             V    + LT   E+
Sbjct: 496 FAVEVFRSALTQHMER 511


>gi|4557809 ornithine aminotransferase precursor [Homo sapiens]
          Length = 439

 Score =  129 bits (323), Expect = 7e-30
 Identities = 116/411 (28%), Positives = 192/411 (46%), Gaps = 55/411 (13%)

Query: 31  PVKIVRAQGQYMYDEQGAEYIDCISNVAHV--GHCHPLVVQAAHEQNQVLNTNSRYLHDN 88
           PV + R +G Y++D +G +Y D +S+ + V  GHCHP +V A   Q   L   SR  ++N
Sbjct: 59  PVALERGKGIYLWDVEGRKYFDFLSSYSAVNQGHCHPKIVNALKSQVDKLTLTSRAFYNN 118

Query: 89  IV----DYAQRL---SETLPEQLCVFYFLNSGSEANDLALRLARHYTGHQDVVVLDHAYH 141
           ++    +Y  +L    + LP        +N+G EA + A +LAR +              
Sbjct: 119 VLGEYEEYITKLFNYHKVLP--------MNTGVEAGETACKLARKW-------------- 156

Query: 142 GHLSSLIDISPYKFRNLDGQKE-WVHVAPLPDTYRGPYREDHPNPAMAYANEVKRVVSSA 200
           G+  ++  I  YK + +      W        +   P   D   P M   + +      A
Sbjct: 157 GY--TVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPYNDLPA 214

Query: 201 QEKGRK---IAAFFAESLPSVGGQIIPPAGYFSQVAEHIRKAGGVFVADEIQVGFGRVGK 257
            E+  +   +AAF  E +    G ++P  GY   V E   +   +F+ADEIQ G  R G+
Sbjct: 215 LERALQDPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGR 274

Query: 258 HFWAFQLQGKDFVPDIVTMGKSIGNG-HPVACVAATQPVARAFEATGVEYFNTFGGSPVS 316
             W   +  ++  PDIV +GK++  G +PV+ V     +    +    E+ +T+GG+P+ 
Sbjct: 275 --W-LAVDYENVRPDIVLLGKALSGGLYPVSAVLCDDDIMLTIKPG--EHGSTYGGNPLG 329

Query: 317 CAVGLAVLNVLEKEQLQDHATSVGSFLMQLLGQQKIKHPIVGDVRGVGLFIGVDLIKDEA 376
           C V +A L VLE+E L ++A  +G  L   L   K+   +V  VRG GL   + +IK+  
Sbjct: 330 CRVAIAALEVLEEENLAENADKLGIILRNEL--MKLPSDVVTAVRGKGLLNAI-VIKE-- 384

Query: 377 TRTPATEEAAYLVSRLKENYVLLS-TDGPGRNILKFKPPMCFSLDNARQVV 426
                  +A  +  RL++N +L   T G   +I++F PP+    D  R+ +
Sbjct: 385 ---TKDWDAWKVCLRLRDNGLLAKPTHG---DIIRFAPPLVIKEDELRESI 429


>gi|188536080 4-aminobutyrate aminotransferase precursor [Homo
           sapiens]
          Length = 500

 Score = 79.7 bits (195), Expect = 5e-15
 Identities = 102/440 (23%), Positives = 175/440 (39%), Gaps = 58/440 (13%)

Query: 37  AQGQYMYDEQGAEYIDCISNVAHV--GHCHPLVVQAAHE-QNQVLNTNSRYLH----DNI 89
           ++G Y+ D  G   +D  S ++ V  G+ HP +++   + QN  +  N   L     +N 
Sbjct: 80  SRGNYLVDVDGNRMLDLYSQISSVPIGYSHPALLKLIQQPQNASMFVNRPALGILPPENF 139

Query: 90  VD-YAQRLSETLPEQLCVFYFLNSGSEANDLALR------------------------LA 124
           V+   Q L    P+ +     +  GS +N+ AL+                        + 
Sbjct: 140 VEKLRQSLLSVAPKGMSQLITMACGSCSNENALKTIFMWYRSKERGQRGFSQEELETCMI 199

Query: 125 RHYTGHQDVVVLDH--AYHGHLSSLIDISPYK-FRNLDGQKEWVHVAPLPDTYRGPYRE- 180
               G  D  +L    A+HG     +  +  K    +D       +AP P   + P  E 
Sbjct: 200 NQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIAPFP-RLKYPLEEF 258

Query: 181 --DHPNPAMAYANEVKRVVSSAQEKGRKIAAFFAESLPSVGGQIIPPAGYFSQVAEHIRK 238
             ++         EV+ ++   ++K + +A    E + S GG       +F ++ +  RK
Sbjct: 259 VKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDIARK 318

Query: 239 AGGVFVADEIQVGFGRVGKHFWAFQLQGKDFVPDIVTMGKSIGNGHPVACVAATQPVARA 298
            G  F+ DE+Q G G  GK FWA +  G D   D++T  K +  G         +P A  
Sbjct: 319 HGCAFLVDEVQTGGGCTGK-FWAHEHWGLDDPADVMTFSKKMMTG-GFFHKEEFRPNA-- 374

Query: 299 FEATGVEYFNTFGGSPVSCAVGLAVLNVLEKEQLQDHATSVGSFLMQLLGQQKIKHP-IV 357
                   FNT+ G P    +   V+N++++E L ++A   G  L+  L   + ++P  +
Sbjct: 375 ----PYRIFNTWLGDPSKNLLLAEVINIIKREDLLNNAAHAGKALLTGLLDLQARYPQFI 430

Query: 358 GDVRGVGLFIGVDLIKDEATRTPATEEAAYLVSRLKENYVLLSTDGPGRNILKFKPPMCF 417
             VRG G F   D        TP       L+   +   V+L   G G   ++F+P + F
Sbjct: 431 SRVRGRGTFCSFD--------TPDDSIRNKLILIARNKGVVLG--GCGDKSIRFRPTLVF 480

Query: 418 SLDNARQVVAKLDAILTDME 437
              +A   +     IL D +
Sbjct: 481 RDHHAHLFLNIFSDILADFK 500


>gi|38679950 4-aminobutyrate aminotransferase precursor [Homo
           sapiens]
          Length = 500

 Score = 79.7 bits (195), Expect = 5e-15
 Identities = 102/440 (23%), Positives = 175/440 (39%), Gaps = 58/440 (13%)

Query: 37  AQGQYMYDEQGAEYIDCISNVAHV--GHCHPLVVQAAHE-QNQVLNTNSRYLH----DNI 89
           ++G Y+ D  G   +D  S ++ V  G+ HP +++   + QN  +  N   L     +N 
Sbjct: 80  SRGNYLVDVDGNRMLDLYSQISSVPIGYSHPALLKLIQQPQNASMFVNRPALGILPPENF 139

Query: 90  VD-YAQRLSETLPEQLCVFYFLNSGSEANDLALR------------------------LA 124
           V+   Q L    P+ +     +  GS +N+ AL+                        + 
Sbjct: 140 VEKLRQSLLSVAPKGMSQLITMACGSCSNENALKTIFMWYRSKERGQRGFSQEELETCMI 199

Query: 125 RHYTGHQDVVVLDH--AYHGHLSSLIDISPYK-FRNLDGQKEWVHVAPLPDTYRGPYRE- 180
               G  D  +L    A+HG     +  +  K    +D       +AP P   + P  E 
Sbjct: 200 NQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIAPFP-RLKYPLEEF 258

Query: 181 --DHPNPAMAYANEVKRVVSSAQEKGRKIAAFFAESLPSVGGQIIPPAGYFSQVAEHIRK 238
             ++         EV+ ++   ++K + +A    E + S GG       +F ++ +  RK
Sbjct: 259 VKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDIARK 318

Query: 239 AGGVFVADEIQVGFGRVGKHFWAFQLQGKDFVPDIVTMGKSIGNGHPVACVAATQPVARA 298
            G  F+ DE+Q G G  GK FWA +  G D   D++T  K +  G         +P A  
Sbjct: 319 HGCAFLVDEVQTGGGCTGK-FWAHEHWGLDDPADVMTFSKKMMTG-GFFHKEEFRPNA-- 374

Query: 299 FEATGVEYFNTFGGSPVSCAVGLAVLNVLEKEQLQDHATSVGSFLMQLLGQQKIKHP-IV 357
                   FNT+ G P    +   V+N++++E L ++A   G  L+  L   + ++P  +
Sbjct: 375 ----PYRIFNTWLGDPSKNLLLAEVINIIKREDLLNNAAHAGKALLTGLLDLQARYPQFI 430

Query: 358 GDVRGVGLFIGVDLIKDEATRTPATEEAAYLVSRLKENYVLLSTDGPGRNILKFKPPMCF 417
             VRG G F   D        TP       L+   +   V+L   G G   ++F+P + F
Sbjct: 431 SRVRGRGTFCSFD--------TPDDSIRNKLILIARNKGVVLG--GCGDKSIRFRPTLVF 480

Query: 418 SLDNARQVVAKLDAILTDME 437
              +A   +     IL D +
Sbjct: 481 RDHHAHLFLNIFSDILADFK 500


>gi|38679946 4-aminobutyrate aminotransferase precursor [Homo
           sapiens]
          Length = 500

 Score = 79.7 bits (195), Expect = 5e-15
 Identities = 102/440 (23%), Positives = 175/440 (39%), Gaps = 58/440 (13%)

Query: 37  AQGQYMYDEQGAEYIDCISNVAHV--GHCHPLVVQAAHE-QNQVLNTNSRYLH----DNI 89
           ++G Y+ D  G   +D  S ++ V  G+ HP +++   + QN  +  N   L     +N 
Sbjct: 80  SRGNYLVDVDGNRMLDLYSQISSVPIGYSHPALLKLIQQPQNASMFVNRPALGILPPENF 139

Query: 90  VD-YAQRLSETLPEQLCVFYFLNSGSEANDLALR------------------------LA 124
           V+   Q L    P+ +     +  GS +N+ AL+                        + 
Sbjct: 140 VEKLRQSLLSVAPKGMSQLITMACGSCSNENALKTIFMWYRSKERGQRGFSQEELETCMI 199

Query: 125 RHYTGHQDVVVLDH--AYHGHLSSLIDISPYK-FRNLDGQKEWVHVAPLPDTYRGPYRE- 180
               G  D  +L    A+HG     +  +  K    +D       +AP P   + P  E 
Sbjct: 200 NQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIAPFP-RLKYPLEEF 258

Query: 181 --DHPNPAMAYANEVKRVVSSAQEKGRKIAAFFAESLPSVGGQIIPPAGYFSQVAEHIRK 238
             ++         EV+ ++   ++K + +A    E + S GG       +F ++ +  RK
Sbjct: 259 VKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDIARK 318

Query: 239 AGGVFVADEIQVGFGRVGKHFWAFQLQGKDFVPDIVTMGKSIGNGHPVACVAATQPVARA 298
            G  F+ DE+Q G G  GK FWA +  G D   D++T  K +  G         +P A  
Sbjct: 319 HGCAFLVDEVQTGGGCTGK-FWAHEHWGLDDPADVMTFSKKMMTG-GFFHKEEFRPNA-- 374

Query: 299 FEATGVEYFNTFGGSPVSCAVGLAVLNVLEKEQLQDHATSVGSFLMQLLGQQKIKHP-IV 357
                   FNT+ G P    +   V+N++++E L ++A   G  L+  L   + ++P  +
Sbjct: 375 ----PYRIFNTWLGDPSKNLLLAEVINIIKREDLLNNAAHAGKALLTGLLDLQARYPQFI 430

Query: 358 GDVRGVGLFIGVDLIKDEATRTPATEEAAYLVSRLKENYVLLSTDGPGRNILKFKPPMCF 417
             VRG G F   D        TP       L+   +   V+L   G G   ++F+P + F
Sbjct: 431 SRVRGRGTFCSFD--------TPDDSIRNKLILIARNKGVVLG--GCGDKSIRFRPTLVF 480

Query: 418 SLDNARQVVAKLDAILTDME 437
              +A   +     IL D +
Sbjct: 481 RDHHAHLFLNIFSDILADFK 500


>gi|169163827 PREDICTED: similar to UPF0634 protein KIAA1641 [Homo
           sapiens]
          Length = 475

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 18/80 (22%), Positives = 31/80 (38%), Gaps = 3/80 (3%)

Query: 62  HCHPLVVQAAHEQNQVLNTNSRYLHDNIVDYAQRLSETLPEQLCVFYFLNSGSEANDLAL 121
           HC     +  H+Q+     +        VD  + L E L   + +     S +E+    L
Sbjct: 264 HCRLNAARCDHDQSHSSKRDQELAFQGTVDKCRHLQENLNSHVLILSLQLSKAESKSRVL 323

Query: 122 RLARHYTGH---QDVVVLDH 138
           +   HYTG    +  +V +H
Sbjct: 324 KTELHYTGEALKEKALVFEH 343


>gi|239741684 PREDICTED: ankyrin repeat domain 36 [Homo sapiens]
          Length = 1524

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 18/80 (22%), Positives = 31/80 (38%), Gaps = 3/80 (3%)

Query: 62   HCHPLVVQAAHEQNQVLNTNSRYLHDNIVDYAQRLSETLPEQLCVFYFLNSGSEANDLAL 121
            HC     +  H+Q+     +        VD  + L E L   + +     S +E+    L
Sbjct: 1214 HCRLNAARCDHDQSHSSKRDQELAFQGTVDKCRHLQENLNSHVLILSLQLSKAESKSRVL 1273

Query: 122  RLARHYTGH---QDVVVLDH 138
            +   HYTG    +  +V +H
Sbjct: 1274 KTELHYTGEALKEKALVFEH 1293


>gi|169161027 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 219

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 10/73 (13%)

Query: 249 QVGFGRVGKHFWAFQLQGKDFVPDIVTMGKSIGNGHPVACVAATQPVARAFEATGVEYFN 308
           Q+G GR    FW    Q +         G++ G G+    +A   P A+A   TG  + +
Sbjct: 153 QLGLGRPPGSFWKLLQQAR---------GRA-GEGNSAVLLAPESPNAQASNVTGATHRS 202

Query: 309 TFGGSPVSCAVGL 321
              G P  C+V L
Sbjct: 203 NLSGFPRPCSVVL 215


>gi|4506903 splicing factor, arginine/serine-rich 9 [Homo sapiens]
          Length = 221

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 13/33 (39%), Positives = 21/33 (63%)

Query: 223 IPPAGYFSQVAEHIRKAGGVFVADEIQVGFGRV 255
           +PP+G +  + +H+R+AG V  AD  + G G V
Sbjct: 118 LPPSGSWQDLKDHMREAGDVCYADVQKDGVGMV 150


>gi|113411962 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 254

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 20/73 (27%), Positives = 30/73 (41%), Gaps = 10/73 (13%)

Query: 249 QVGFGRVGKHFWAFQLQGKDFVPDIVTMGKSIGNGHPVACVAATQPVARAFEATGVEYFN 308
           Q+G GR    FW    Q +         G++ G G+    +A   P  +A   TG  + +
Sbjct: 188 QLGLGRPPGSFWKLLQQAR---------GRA-GEGNSAVLLAPESPNTQASNVTGATHRS 237

Query: 309 TFGGSPVSCAVGL 321
              G P  C+V L
Sbjct: 238 NLSGFPRPCSVVL 250


>gi|113403778 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 219

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 20/73 (27%), Positives = 30/73 (41%), Gaps = 10/73 (13%)

Query: 249 QVGFGRVGKHFWAFQLQGKDFVPDIVTMGKSIGNGHPVACVAATQPVARAFEATGVEYFN 308
           Q+G GR    FW    Q +         G++ G G+    +A   P  +A   TG  + +
Sbjct: 153 QLGLGRPPGSFWKLLQQAR---------GRA-GEGNSAVLLAPESPNTQASNVTGATHRS 202

Query: 309 TFGGSPVSCAVGL 321
              G P  C+V L
Sbjct: 203 NLSGFPRPCSVVL 215


>gi|118582269 splicing factor, arginine/serine-rich 1 isoform 2
           [Homo sapiens]
          Length = 201

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 13/33 (39%), Positives = 21/33 (63%)

Query: 223 IPPAGYFSQVAEHIRKAGGVFVADEIQVGFGRV 255
           +PP+G +  + +H+R+AG V  AD  + G G V
Sbjct: 128 LPPSGSWQDLKDHMREAGDVCYADVYRDGTGVV 160


>gi|5902076 splicing factor, arginine/serine-rich 1 isoform 1 [Homo
           sapiens]
          Length = 248

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 13/33 (39%), Positives = 21/33 (63%)

Query: 223 IPPAGYFSQVAEHIRKAGGVFVADEIQVGFGRV 255
           +PP+G +  + +H+R+AG V  AD  + G G V
Sbjct: 128 LPPSGSWQDLKDHMREAGDVCYADVYRDGTGVV 160


>gi|124517695 ankyrin repeat domain 36B [Homo sapiens]
          Length = 1121

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 17/79 (21%), Positives = 30/79 (37%), Gaps = 3/79 (3%)

Query: 63  CHPLVVQAAHEQNQVLNTNSRYLHDNIVDYAQRLSETLPEQLCVFYFLNSGSEANDLALR 122
           C     +  H+Q+     +        VD  + L E L   + +     S +E+    L+
Sbjct: 812 CRLNAARCDHDQSHSSKRDQELAFQGTVDKCRHLQENLNSHVLILSLQLSKAESKSRVLK 871

Query: 123 LARHYTGH---QDVVVLDH 138
              HYTG    +  +V +H
Sbjct: 872 TELHYTGEALKEKALVFEH 890


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.136    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,266,636
Number of Sequences: 37866
Number of extensions: 758010
Number of successful extensions: 1509
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1478
Number of HSP's gapped (non-prelim): 19
length of query: 450
length of database: 18,247,518
effective HSP length: 106
effective length of query: 344
effective length of database: 14,233,722
effective search space: 4896400368
effective search space used: 4896400368
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press