Guide to the Human Genome
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Name: ZNF610 Sequence: fasta or formatted (462aa) NCBI GI: 239787098
Description:

zinc finger protein 610 isoform a

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt mRNA [462aa] zinc finger protein 610 isoform a
alt mRNA [462aa] zinc finger protein 610 isoform a
alt prot [419aa] zinc finger protein 610 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.1         19           1
 C cysteine            4.8         22           1
 D aspartate           2.4         11           1
 E glutamate           8.0         37           2
 F phenylalanine       3.9         18           1
 G glycine             5.6         26           1
 H histidine           5.6         26           1
 I isoleucine          4.5         21           2
 K lysine              8.9         41           1
 L leucine             8.9         41           2
 M methionine          1.5          7           1
 N asparagine          6.1         28           1
 P proline             3.9         18           1
 Q glutamine           4.5         21           1
 R arginine            7.4         34           2
 S serine              6.9         32           3
 T threonine           4.8         22           2
 V valine              4.3         20           1
 W tryptophan          0.4          2           1
 Y tyrosine            3.5         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 610 isoform a 
ZNF610                1.000   zinc finger protein 610 isoform a 
ZNF610                1.000   zinc finger protein 610 isoform a 
ZNF610                0.891   zinc finger protein 610 isoform b 
ZNF480                0.638   zinc finger protein 480 
ZNF528                0.608   zinc finger protein 528 
ZNF534                0.595   zinc finger protein 534 isoform 1 
ZNF534                0.585   zinc finger protein 534 isoform 2 
ZNF766                0.579   zinc finger protein 766 
LOC400713             0.577   zinc finger protein LOC400713 
ZNF836                0.480   zinc finger protein 836 
ZNF808                0.462   zinc finger protein 808 
ZNF665                0.451   zinc finger protein 665 
ZNF578                0.451   zinc finger protein 578 
ZNF415                0.449   zinc finger protein 415 isoform 2 
LOC388559             0.447   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.447   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.447   PREDICTED: hypothetical protein LOC388559 
ZNF813                0.441   zinc finger protein 813 
ZNF347                0.436   zinc finger protein 347 
ZNF468                0.432   zinc finger protein ZNF468 isoform 2 
ZNF701                0.430   zinc finger protein 701 
ZNF845                0.427   zinc finger protein 845 
ZNF160                0.426   zinc finger protein 160 
ZNF160                0.426   zinc finger protein 160 
ZNF160                0.426   zinc finger protein 160 
ZNF761                0.423   zinc finger protein 761 
ZNF83                 0.421   zinc finger protein 83 isoform a 
ZNF83                 0.421   zinc finger protein 83 isoform a 
ZNF83                 0.421   zinc finger protein 83 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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