BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|239758160 PREDICTED: hypothetical protein [Homo sapiens] (44 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|239758160 PREDICTED: hypothetical protein [Homo sapiens] 91 2e-19 gi|239743173 PREDICTED: similar to solute carrier family 29 (nuc... 91 2e-19 gi|239508837 PREDICTED: similar to solute carrier family 29 (nuc... 91 2e-19 gi|239749147 PREDICTED: hypothetical protein XP_002346925 [Homo ... 90 3e-19 gi|100913034 solute carrier family 29 (nucleoside transporters),... 88 1e-18 gi|100913032 solute carrier family 29 (nucleoside transporters),... 88 1e-18 gi|239743192 PREDICTED: similar to solute carrier family 29 (nuc... 87 4e-18 gi|239508861 PREDICTED: similar to solute carrier family 29 (nuc... 87 4e-18 gi|90669191 solute carrier family 22 member 7 isoform b [Homo sa... 27 4.6 gi|24497497 solute carrier family 22 member 7 isoform a [Homo sa... 27 4.6 gi|238776801 SVH protein isoform f [Homo sapiens] 26 6.0 gi|238776799 SVH protein isoform d [Homo sapiens] 26 6.0 gi|238776797 SVH protein isoform e [Homo sapiens] 26 6.0 gi|238776795 SVH protein isoform c [Homo sapiens] 26 6.0 gi|238776793 SVH protein isoform b [Homo sapiens] 26 6.0 gi|31377663 SVH protein isoform a [Homo sapiens] 26 6.0 gi|169165524 PREDICTED: similar to SVH protein isoform 2 [Homo s... 26 6.0 gi|169165522 PREDICTED: similar to SVH protein isoform 1 [Homo s... 26 6.0 gi|113415138 PREDICTED: similar to SVH protein isoform 2 [Homo s... 26 6.0 gi|169165931 PREDICTED: similar to SVH protein isoform 1 [Homo s... 26 6.0 gi|169165133 PREDICTED: similar to SVH protein isoform 1 [Homo s... 26 6.0 gi|113414573 PREDICTED: similar to SVH protein isoform 2 [Homo s... 26 6.0 gi|29540566 armadillo repeat containing, X-linked 3 [Homo sapiens] 26 7.8 gi|29540564 armadillo repeat containing, X-linked 3 [Homo sapiens] 26 7.8 gi|7705274 armadillo repeat containing, X-linked 3 [Homo sapiens] 26 7.8 gi|108796649 hypothetical protein LOC283677 [Homo sapiens] 26 7.8 >gi|239758160 PREDICTED: hypothetical protein [Homo sapiens] Length = 44 Score = 91.3 bits (225), Expect = 2e-19 Identities = 44/44 (100%), Positives = 44/44 (100%) Query: 1 MTVSYVSGLTLGSAVAYCTYSLTRDAHGSCLHASTANGSILTGL 44 MTVSYVSGLTLGSAVAYCTYSLTRDAHGSCLHASTANGSILTGL Sbjct: 1 MTVSYVSGLTLGSAVAYCTYSLTRDAHGSCLHASTANGSILTGL 44 >gi|239743173 PREDICTED: similar to solute carrier family 29 (nucleoside transporters), member 4 [Homo sapiens] Length = 414 Score = 91.3 bits (225), Expect = 2e-19 Identities = 44/44 (100%), Positives = 44/44 (100%) Query: 1 MTVSYVSGLTLGSAVAYCTYSLTRDAHGSCLHASTANGSILTGL 44 MTVSYVSGLTLGSAVAYCTYSLTRDAHGSCLHASTANGSILTGL Sbjct: 371 MTVSYVSGLTLGSAVAYCTYSLTRDAHGSCLHASTANGSILTGL 414 >gi|239508837 PREDICTED: similar to solute carrier family 29 (nucleoside transporters), member 4 [Homo sapiens] Length = 414 Score = 91.3 bits (225), Expect = 2e-19 Identities = 44/44 (100%), Positives = 44/44 (100%) Query: 1 MTVSYVSGLTLGSAVAYCTYSLTRDAHGSCLHASTANGSILTGL 44 MTVSYVSGLTLGSAVAYCTYSLTRDAHGSCLHASTANGSILTGL Sbjct: 371 MTVSYVSGLTLGSAVAYCTYSLTRDAHGSCLHASTANGSILTGL 414 >gi|239749147 PREDICTED: hypothetical protein XP_002346925 [Homo sapiens] Length = 44 Score = 90.1 bits (222), Expect = 3e-19 Identities = 43/44 (97%), Positives = 44/44 (100%) Query: 1 MTVSYVSGLTLGSAVAYCTYSLTRDAHGSCLHASTANGSILTGL 44 MTVSY+SGLTLGSAVAYCTYSLTRDAHGSCLHASTANGSILTGL Sbjct: 1 MTVSYMSGLTLGSAVAYCTYSLTRDAHGSCLHASTANGSILTGL 44 >gi|100913034 solute carrier family 29 (nucleoside transporters), member 4 [Homo sapiens] Length = 530 Score = 88.2 bits (217), Expect = 1e-18 Identities = 42/44 (95%), Positives = 43/44 (97%) Query: 1 MTVSYVSGLTLGSAVAYCTYSLTRDAHGSCLHASTANGSILTGL 44 MTVSY+SGLTLGSAVAYCTYSLTRDAHGSCLHASTANGSIL GL Sbjct: 487 MTVSYMSGLTLGSAVAYCTYSLTRDAHGSCLHASTANGSILAGL 530 >gi|100913032 solute carrier family 29 (nucleoside transporters), member 4 [Homo sapiens] Length = 530 Score = 88.2 bits (217), Expect = 1e-18 Identities = 42/44 (95%), Positives = 43/44 (97%) Query: 1 MTVSYVSGLTLGSAVAYCTYSLTRDAHGSCLHASTANGSILTGL 44 MTVSY+SGLTLGSAVAYCTYSLTRDAHGSCLHASTANGSIL GL Sbjct: 487 MTVSYMSGLTLGSAVAYCTYSLTRDAHGSCLHASTANGSILAGL 530 >gi|239743192 PREDICTED: similar to solute carrier family 29 (nucleoside transporters), member 4 [Homo sapiens] Length = 329 Score = 86.7 bits (213), Expect = 4e-18 Identities = 41/44 (93%), Positives = 44/44 (100%) Query: 1 MTVSYVSGLTLGSAVAYCTYSLTRDAHGSCLHASTANGSILTGL 44 MTVSY+SGLTLGSAVAYC+YSLTR+AHGSCLHASTANGSILTGL Sbjct: 286 MTVSYMSGLTLGSAVAYCSYSLTRNAHGSCLHASTANGSILTGL 329 >gi|239508861 PREDICTED: similar to solute carrier family 29 (nucleoside transporters), member 4 [Homo sapiens] Length = 329 Score = 86.7 bits (213), Expect = 4e-18 Identities = 41/44 (93%), Positives = 44/44 (100%) Query: 1 MTVSYVSGLTLGSAVAYCTYSLTRDAHGSCLHASTANGSILTGL 44 MTVSY+SGLTLGSAVAYC+YSLTR+AHGSCLHASTANGSILTGL Sbjct: 286 MTVSYMSGLTLGSAVAYCSYSLTRNAHGSCLHASTANGSILTGL 329 >gi|90669191 solute carrier family 22 member 7 isoform b [Homo sapiens] Length = 548 Score = 26.6 bits (57), Expect = 4.6 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 4/39 (10%) Query: 1 MTVSYVSGLTLGSA----VAYCTYSLTRDAHGSCLHAST 35 + V+YVS L LG A V+Y +++TR GS L T Sbjct: 175 LLVAYVSTLVLGLASAASVSYVMFAITRTLTGSALAGFT 213 >gi|24497497 solute carrier family 22 member 7 isoform a [Homo sapiens] Length = 546 Score = 26.6 bits (57), Expect = 4.6 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 4/39 (10%) Query: 1 MTVSYVSGLTLGSA----VAYCTYSLTRDAHGSCLHAST 35 + V+YVS L LG A V+Y +++TR GS L T Sbjct: 173 LLVAYVSTLVLGLASAASVSYVMFAITRTLTGSALAGFT 211 >gi|238776801 SVH protein isoform f [Homo sapiens] Length = 225 Score = 26.2 bits (56), Expect = 6.0 Identities = 10/18 (55%), Positives = 12/18 (66%) Query: 7 SGLTLGSAVAYCTYSLTR 24 +GL LG+ YC Y LTR Sbjct: 12 AGLLLGAGACYCIYRLTR 29 >gi|238776799 SVH protein isoform d [Homo sapiens] Length = 249 Score = 26.2 bits (56), Expect = 6.0 Identities = 10/18 (55%), Positives = 12/18 (66%) Query: 7 SGLTLGSAVAYCTYSLTR 24 +GL LG+ YC Y LTR Sbjct: 12 AGLLLGAGACYCIYRLTR 29 >gi|238776797 SVH protein isoform e [Homo sapiens] Length = 284 Score = 26.2 bits (56), Expect = 6.0 Identities = 10/18 (55%), Positives = 12/18 (66%) Query: 7 SGLTLGSAVAYCTYSLTR 24 +GL LG+ YC Y LTR Sbjct: 12 AGLLLGAGACYCIYRLTR 29 >gi|238776795 SVH protein isoform c [Homo sapiens] Length = 284 Score = 26.2 bits (56), Expect = 6.0 Identities = 10/18 (55%), Positives = 12/18 (66%) Query: 7 SGLTLGSAVAYCTYSLTR 24 +GL LG+ YC Y LTR Sbjct: 12 AGLLLGAGACYCIYRLTR 29 >gi|238776793 SVH protein isoform b [Homo sapiens] Length = 308 Score = 26.2 bits (56), Expect = 6.0 Identities = 10/18 (55%), Positives = 12/18 (66%) Query: 7 SGLTLGSAVAYCTYSLTR 24 +GL LG+ YC Y LTR Sbjct: 12 AGLLLGAGACYCIYRLTR 29 >gi|31377663 SVH protein isoform a [Homo sapiens] Length = 343 Score = 26.2 bits (56), Expect = 6.0 Identities = 10/18 (55%), Positives = 12/18 (66%) Query: 7 SGLTLGSAVAYCTYSLTR 24 +GL LG+ YC Y LTR Sbjct: 12 AGLLLGAGACYCIYRLTR 29 >gi|169165524 PREDICTED: similar to SVH protein isoform 2 [Homo sapiens] Length = 253 Score = 26.2 bits (56), Expect = 6.0 Identities = 10/18 (55%), Positives = 12/18 (66%) Query: 7 SGLTLGSAVAYCTYSLTR 24 +GL LG+ YC Y LTR Sbjct: 12 AGLLLGAGACYCIYRLTR 29 >gi|169165522 PREDICTED: similar to SVH protein isoform 1 [Homo sapiens] Length = 284 Score = 26.2 bits (56), Expect = 6.0 Identities = 10/18 (55%), Positives = 12/18 (66%) Query: 7 SGLTLGSAVAYCTYSLTR 24 +GL LG+ YC Y LTR Sbjct: 12 AGLLLGAGACYCIYRLTR 29 >gi|113415138 PREDICTED: similar to SVH protein isoform 2 [Homo sapiens] Length = 253 Score = 26.2 bits (56), Expect = 6.0 Identities = 10/18 (55%), Positives = 12/18 (66%) Query: 7 SGLTLGSAVAYCTYSLTR 24 +GL LG+ YC Y LTR Sbjct: 12 AGLLLGAGACYCIYRLTR 29 >gi|169165931 PREDICTED: similar to SVH protein isoform 1 [Homo sapiens] Length = 284 Score = 26.2 bits (56), Expect = 6.0 Identities = 10/18 (55%), Positives = 12/18 (66%) Query: 7 SGLTLGSAVAYCTYSLTR 24 +GL LG+ YC Y LTR Sbjct: 12 AGLLLGAGACYCIYRLTR 29 >gi|169165133 PREDICTED: similar to SVH protein isoform 1 [Homo sapiens] Length = 253 Score = 26.2 bits (56), Expect = 6.0 Identities = 10/18 (55%), Positives = 12/18 (66%) Query: 7 SGLTLGSAVAYCTYSLTR 24 +GL LG+ YC Y LTR Sbjct: 12 AGLLLGAGACYCIYRLTR 29 >gi|113414573 PREDICTED: similar to SVH protein isoform 2 [Homo sapiens] Length = 284 Score = 26.2 bits (56), Expect = 6.0 Identities = 10/18 (55%), Positives = 12/18 (66%) Query: 7 SGLTLGSAVAYCTYSLTR 24 +GL LG+ YC Y LTR Sbjct: 12 AGLLLGAGACYCIYRLTR 29 >gi|29540566 armadillo repeat containing, X-linked 3 [Homo sapiens] Length = 379 Score = 25.8 bits (55), Expect = 7.8 Identities = 9/18 (50%), Positives = 12/18 (66%) Query: 7 SGLTLGSAVAYCTYSLTR 24 +GL +G+ YC Y LTR Sbjct: 12 AGLVIGAGACYCIYRLTR 29 >gi|29540564 armadillo repeat containing, X-linked 3 [Homo sapiens] Length = 379 Score = 25.8 bits (55), Expect = 7.8 Identities = 9/18 (50%), Positives = 12/18 (66%) Query: 7 SGLTLGSAVAYCTYSLTR 24 +GL +G+ YC Y LTR Sbjct: 12 AGLVIGAGACYCIYRLTR 29 >gi|7705274 armadillo repeat containing, X-linked 3 [Homo sapiens] Length = 379 Score = 25.8 bits (55), Expect = 7.8 Identities = 9/18 (50%), Positives = 12/18 (66%) Query: 7 SGLTLGSAVAYCTYSLTR 24 +GL +G+ YC Y LTR Sbjct: 12 AGLVIGAGACYCIYRLTR 29 >gi|108796649 hypothetical protein LOC283677 [Homo sapiens] Length = 266 Score = 25.8 bits (55), Expect = 7.8 Identities = 17/36 (47%), Positives = 17/36 (47%), Gaps = 7/36 (19%) Query: 8 GLTLGSAV-------AYCTYSLTRDAHGSCLHASTA 36 GLT G A A C S TRD G CL A TA Sbjct: 12 GLTGGEAAEWPLQRYARCIPSNTRDPPGPCLEAGTA 47 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.317 0.127 0.372 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,376,400 Number of Sequences: 37866 Number of extensions: 28378 Number of successful extensions: 93 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 23 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 70 Number of HSP's gapped (non-prelim): 26 length of query: 44 length of database: 18,247,518 effective HSP length: 18 effective length of query: 26 effective length of database: 17,565,930 effective search space: 456714180 effective search space used: 456714180 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.